HEADER HYDROLASE 06-JAN-10 3LAC TITLE CRYSTAL STRUCTURE OF BACILLUS ANTHRACIS PYRROLIDONE-CARBOXYLATE TITLE 2 PEPTIDASE, PCP COMPND MOL_ID: 1; COMPND 2 MOLECULE: PYRROLIDONE-CARBOXYLATE PEPTIDASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 5-OXOPROLYL-PEPTIDASE, PYROGLUTAMYL-PEPTIDASE I, PGP-I, COMPND 5 PYRASE; COMPND 6 EC: 3.4.19.3; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS ANTHRACIS; SOURCE 3 ORGANISM_COMMON: ANTHRAX,ANTHRAX BACTERIUM; SOURCE 4 ORGANISM_TAXID: 1392; SOURCE 5 STRAIN: AMES ANCESTOR; SOURCE 6 GENE: PCP, BA_3090, GBAA_3090, BAS2875; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS ALPHA BETA CLASS, THREE LAYER SANDWICH, BACILLUS ANTHRACIS, CSGID, KEYWDS 2 HYDROLASE, PROTEASE, THIOL PROTEASE, STRUCTURAL GENOMICS, CENTER FOR KEYWDS 3 STRUCTURAL GENOMICS OF INFECTIOUS DISEASES EXPDTA X-RAY DIFFRACTION AUTHOR S.M.ANDERSON,Z.WAWRZAK,O.ONOPRIYENKO,J.HASSEMAN,A.EDWARDS, AUTHOR 2 A.SAVCHENKO,W.F.ANDERSON,CENTER FOR STRUCTURAL GENOMICS OF AUTHOR 3 INFECTIOUS DISEASES (CSGID) REVDAT 3 14-DEC-11 3LAC 1 AUTHOR JRNL REVDAT 2 13-JUL-11 3LAC 1 VERSN REVDAT 1 19-JAN-10 3LAC 0 JRNL AUTH S.M.ANDERSON,Z.WAWRZAK,O.ONOPRIYENKO,J.HASSEMAN,A.EDWARDS, JRNL AUTH 2 A.SAVCHENKO,W.F.ANDERSON, JRNL AUTH 3 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 4 (CSGID) JRNL TITL CRYSTAL STRUCTURE OF BACILLUS ANTHRACIS JRNL TITL 2 PYRROLIDONE-CARBOXYLATE PEPTIDASE, PCP JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.30 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 30484 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1538 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1947 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.2170 REMARK 3 BIN FREE R VALUE SET COUNT : 92 REMARK 3 BIN FREE R VALUE : 0.2650 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3154 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 65 REMARK 3 SOLVENT ATOMS : 287 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.09000 REMARK 3 B22 (A**2) : 0.09000 REMARK 3 B33 (A**2) : -0.19000 REMARK 3 B12 (A**2) : -0.00000 REMARK 3 B13 (A**2) : -0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.180 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.159 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.107 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.287 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.937 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3307 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4464 ; 1.646 ; 1.980 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 416 ;10.606 ; 5.096 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 133 ;35.664 ;25.188 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 567 ;14.745 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;11.521 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 503 ; 0.118 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2427 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2043 ; 1.526 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3334 ; 2.390 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1264 ; 4.200 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1127 ; 6.279 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 110 REMARK 3 ORIGIN FOR THE GROUP (A): 21.1290 70.8220 83.6910 REMARK 3 T TENSOR REMARK 3 T11: 0.1844 T22: 0.1708 REMARK 3 T33: 0.1711 T12: 0.1067 REMARK 3 T13: -0.0286 T23: -0.0505 REMARK 3 L TENSOR REMARK 3 L11: 0.4938 L22: 0.8887 REMARK 3 L33: 1.8416 L12: 0.2089 REMARK 3 L13: 0.2748 L23: 0.0479 REMARK 3 S TENSOR REMARK 3 S11: -0.0709 S12: -0.0362 S13: 0.0776 REMARK 3 S21: 0.1022 S22: -0.0288 S23: 0.1066 REMARK 3 S31: -0.4262 S32: -0.3111 S33: 0.0997 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 111 A 167 REMARK 3 ORIGIN FOR THE GROUP (A): 17.3670 67.4720 73.8710 REMARK 3 T TENSOR REMARK 3 T11: 0.1455 T22: 0.2652 REMARK 3 T33: 0.1939 T12: 0.1025 REMARK 3 T13: -0.0744 T23: -0.0383 REMARK 3 L TENSOR REMARK 3 L11: 0.6534 L22: 1.6622 REMARK 3 L33: 0.6353 L12: 0.2693 REMARK 3 L13: -0.1138 L23: 0.1489 REMARK 3 S TENSOR REMARK 3 S11: -0.1099 S12: 0.0214 S13: 0.1254 REMARK 3 S21: -0.0273 S22: -0.1064 S23: 0.1212 REMARK 3 S31: -0.1962 S32: -0.2957 S33: 0.2164 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 168 A 204 REMARK 3 ORIGIN FOR THE GROUP (A): 31.9300 73.2360 73.4670 REMARK 3 T TENSOR REMARK 3 T11: 0.3027 T22: 0.0780 REMARK 3 T33: 0.1604 T12: 0.0362 REMARK 3 T13: -0.0638 T23: -0.0087 REMARK 3 L TENSOR REMARK 3 L11: 3.1263 L22: 0.8640 REMARK 3 L33: 1.4602 L12: -0.9688 REMARK 3 L13: 1.1339 L23: 0.0994 REMARK 3 S TENSOR REMARK 3 S11: -0.0993 S12: -0.1290 S13: 0.2943 REMARK 3 S21: -0.0140 S22: 0.0461 S23: -0.0943 REMARK 3 S31: -0.4123 S32: 0.0013 S33: 0.0532 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 110 REMARK 3 ORIGIN FOR THE GROUP (A): 16.9860 39.9880 67.3270 REMARK 3 T TENSOR REMARK 3 T11: 0.0316 T22: 0.3358 REMARK 3 T33: 0.1405 T12: -0.0370 REMARK 3 T13: 0.0196 T23: -0.0079 REMARK 3 L TENSOR REMARK 3 L11: 0.2836 L22: 0.9122 REMARK 3 L33: 1.2922 L12: -0.2206 REMARK 3 L13: 0.2285 L23: 0.1474 REMARK 3 S TENSOR REMARK 3 S11: 0.0060 S12: -0.0495 S13: 0.0610 REMARK 3 S21: -0.0623 S22: -0.0468 S23: 0.0232 REMARK 3 S31: 0.1047 S32: -0.3007 S33: 0.0407 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 111 B 167 REMARK 3 ORIGIN FOR THE GROUP (A): 18.3420 43.7350 77.9040 REMARK 3 T TENSOR REMARK 3 T11: 0.0654 T22: 0.4281 REMARK 3 T33: 0.1574 T12: 0.0070 REMARK 3 T13: 0.0031 T23: -0.0305 REMARK 3 L TENSOR REMARK 3 L11: 0.1056 L22: 1.4793 REMARK 3 L33: 0.7375 L12: -0.3020 REMARK 3 L13: 0.0331 L23: 0.1450 REMARK 3 S TENSOR REMARK 3 S11: -0.0595 S12: -0.0806 S13: 0.0304 REMARK 3 S21: 0.1149 S22: -0.0441 S23: 0.0324 REMARK 3 S31: 0.0694 S32: -0.4228 S33: 0.1035 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 168 B 204 REMARK 3 ORIGIN FOR THE GROUP (A): 31.0260 37.6850 71.7080 REMARK 3 T TENSOR REMARK 3 T11: 0.0858 T22: 0.1997 REMARK 3 T33: 0.1443 T12: -0.0047 REMARK 3 T13: 0.0056 T23: -0.0062 REMARK 3 L TENSOR REMARK 3 L11: 2.2876 L22: 0.8815 REMARK 3 L33: 2.7306 L12: 0.9032 REMARK 3 L13: -1.4790 L23: -0.7543 REMARK 3 S TENSOR REMARK 3 S11: -0.0631 S12: 0.0707 S13: -0.1318 REMARK 3 S21: -0.0761 S22: -0.0179 S23: -0.0822 REMARK 3 S31: 0.1266 S32: -0.1129 S33: 0.0810 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES: RESIDUAL ONLY REMARK 4 REMARK 4 3LAC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JAN-10. REMARK 100 THE RCSB ID CODE IS RCSB057032. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-NOV-09 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : C(111) DIAMOND LAUE MONOCHROMATOR REMARK 200 OPTICS : BERYLLIUM LENS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30518 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 34.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 10.500 REMARK 200 R MERGE (I) : 0.10200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.8 REMARK 200 DATA REDUNDANCY IN SHELL : 8.20 REMARK 200 R MERGE FOR SHELL (I) : 0.52600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 1% PEG 5KMME, 200MM REMARK 280 MAGNESIUM CHLORIDE, 100MM TRIS PH 8.5, 0.5% TACSIMATE, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+1/4 REMARK 290 8555 -Y,-X,-Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.52000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 105.78000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 35.26000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 70.52000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 35.26000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 105.78000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 78.55000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 141.04000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 376 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 290 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 228 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 227 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 205 REMARK 465 ASP A 206 REMARK 465 ILE A 207 REMARK 465 VAL A 208 REMARK 465 GLU A 209 REMARK 465 VAL A 210 REMARK 465 GLY A 211 REMARK 465 GLY A 212 REMARK 465 THR A 213 REMARK 465 THR A 214 REMARK 465 HIS A 215 REMARK 465 VAL B 205 REMARK 465 ASP B 206 REMARK 465 ILE B 207 REMARK 465 VAL B 208 REMARK 465 GLU B 209 REMARK 465 VAL B 210 REMARK 465 GLY B 211 REMARK 465 GLY B 212 REMARK 465 THR B 213 REMARK 465 THR B 214 REMARK 465 HIS B 215 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CA GLU B 107 CB GLU B 107 5556 1.98 REMARK 500 O GLU B 107 CB GLU B 107 5556 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 47 -46.26 81.12 REMARK 500 PHE A 141 -153.16 -115.02 REMARK 500 THR A 159 17.47 51.57 REMARK 500 PRO A 179 132.08 -36.15 REMARK 500 HIS B 47 -56.89 86.02 REMARK 500 PHE B 141 -159.15 -97.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 217 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PRO B 75 O REMARK 620 2 SER B 183 O 107.9 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 216 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 217 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 218 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 219 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 216 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 217 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 218 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 219 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 220 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 221 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 222 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: IDP02531 RELATED DB: TARGETDB DBREF 3LAC A 1 215 UNP Q81NT5 PCP_BACAN 1 215 DBREF 3LAC B 1 215 UNP Q81NT5 PCP_BACAN 1 215 SEQRES 1 A 215 MSE LYS THR VAL LEU LEU THR GLY PHE ASP PRO PHE GLY SEQRES 2 A 215 GLY GLU SER ILE ASN PRO ALA TRP GLU VAL ALA LYS SER SEQRES 3 A 215 LEU HIS GLU LYS THR ILE GLY GLU TYR LYS ILE ILE SER SEQRES 4 A 215 LYS GLN VAL PRO THR VAL PHE HIS LYS SER ILE SER VAL SEQRES 5 A 215 LEU LYS GLU TYR ILE GLU GLU LEU ALA PRO GLU PHE ILE SEQRES 6 A 215 ILE CYS ILE GLY GLN ALA GLY GLY ARG PRO ASP ILE THR SEQRES 7 A 215 ILE GLU ARG VAL ALA ILE ASN ILE ASP ASP ALA ARG ILE SEQRES 8 A 215 ALA ASP ASN GLU GLY ASN GLN PRO VAL ASP VAL PRO VAL SEQRES 9 A 215 VAL GLU GLU GLY PRO ALA ALA TYR TRP SER THR LEU PRO SEQRES 10 A 215 MSE LYS ALA ILE VAL LYS LYS LEU GLN GLU GLU GLY ILE SEQRES 11 A 215 PRO ALA SER VAL SER GLN THR ALA GLY THR PHE VAL CSO SEQRES 12 A 215 ASN HIS LEU PHE TYR GLY LEU MSE HIS GLU LEU GLU LYS SEQRES 13 A 215 HIS ASP THR LYS MSE LYS GLY GLY PHE ILE HIS ILE PRO SEQRES 14 A 215 PHE LEU PRO GLU GLN ALA SER ASN TYR PRO GLY GLN PRO SEQRES 15 A 215 SER MSE SER LEU SER THR ILE ARG LYS GLY ILE GLU LEU SEQRES 16 A 215 ALA VAL GLU VAL THR THR THR VAL GLU VAL ASP ILE VAL SEQRES 17 A 215 GLU VAL GLY GLY THR THR HIS SEQRES 1 B 215 MSE LYS THR VAL LEU LEU THR GLY PHE ASP PRO PHE GLY SEQRES 2 B 215 GLY GLU SER ILE ASN PRO ALA TRP GLU VAL ALA LYS SER SEQRES 3 B 215 LEU HIS GLU LYS THR ILE GLY GLU TYR LYS ILE ILE SER SEQRES 4 B 215 LYS GLN VAL PRO THR VAL PHE HIS LYS SER ILE SER VAL SEQRES 5 B 215 LEU LYS GLU TYR ILE GLU GLU LEU ALA PRO GLU PHE ILE SEQRES 6 B 215 ILE CYS ILE GLY GLN ALA GLY GLY ARG PRO ASP ILE THR SEQRES 7 B 215 ILE GLU ARG VAL ALA ILE ASN ILE ASP ASP ALA ARG ILE SEQRES 8 B 215 ALA ASP ASN GLU GLY ASN GLN PRO VAL ASP VAL PRO VAL SEQRES 9 B 215 VAL GLU GLU GLY PRO ALA ALA TYR TRP SER THR LEU PRO SEQRES 10 B 215 MSE LYS ALA ILE VAL LYS LYS LEU GLN GLU GLU GLY ILE SEQRES 11 B 215 PRO ALA SER VAL SER GLN THR ALA GLY THR PHE VAL CSO SEQRES 12 B 215 ASN HIS LEU PHE TYR GLY LEU MSE HIS GLU LEU GLU LYS SEQRES 13 B 215 HIS ASP THR LYS MSE LYS GLY GLY PHE ILE HIS ILE PRO SEQRES 14 B 215 PHE LEU PRO GLU GLN ALA SER ASN TYR PRO GLY GLN PRO SEQRES 15 B 215 SER MSE SER LEU SER THR ILE ARG LYS GLY ILE GLU LEU SEQRES 16 B 215 ALA VAL GLU VAL THR THR THR VAL GLU VAL ASP ILE VAL SEQRES 17 B 215 GLU VAL GLY GLY THR THR HIS MODRES 3LAC MSE A 1 MET SELENOMETHIONINE MODRES 3LAC MSE A 118 MET SELENOMETHIONINE MODRES 3LAC CSO A 143 CYS S-HYDROXYCYSTEINE MODRES 3LAC MSE A 151 MET SELENOMETHIONINE MODRES 3LAC MSE A 161 MET SELENOMETHIONINE MODRES 3LAC MSE A 184 MET SELENOMETHIONINE MODRES 3LAC MSE B 1 MET SELENOMETHIONINE MODRES 3LAC MSE B 118 MET SELENOMETHIONINE MODRES 3LAC CSO B 143 CYS S-HYDROXYCYSTEINE MODRES 3LAC MSE B 151 MET SELENOMETHIONINE MODRES 3LAC MSE B 161 MET SELENOMETHIONINE MODRES 3LAC MSE B 184 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 118 8 HET CSO A 143 7 HET MSE A 151 8 HET MSE A 161 8 HET MSE A 184 8 HET MSE B 1 8 HET MSE B 118 8 HET CSO B 143 7 HET MSE B 151 8 HET MSE B 161 8 HET MSE B 184 8 HET PEG A 216 7 HET PEG A 217 7 HET PEG A 218 7 HET PEG A 219 7 HET MG B 216 1 HET MG B 217 1 HET PEG B 218 7 HET PEG B 219 7 HET PEG B 220 7 HET PEG B 221 7 HET PEG B 222 7 HETNAM MSE SELENOMETHIONINE HETNAM CSO S-HYDROXYCYSTEINE HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM MG MAGNESIUM ION FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 1 CSO 2(C3 H7 N O3 S) FORMUL 3 PEG 9(C4 H10 O3) FORMUL 7 MG 2(MG 2+) FORMUL 14 HOH *287(H2 O) HELIX 1 1 ASN A 18 SER A 26 1 9 HELIX 2 2 HIS A 47 ALA A 61 1 15 HELIX 3 3 PRO A 117 GLU A 128 1 12 HELIX 4 4 PHE A 141 GLU A 155 1 15 HELIX 5 5 LYS A 156 ASP A 158 5 3 HELIX 6 6 LEU A 171 SER A 176 1 6 HELIX 7 7 SER A 185 THR A 201 1 17 HELIX 8 8 ASN B 18 LEU B 27 1 10 HELIX 9 9 HIS B 47 ALA B 61 1 15 HELIX 10 10 PRO B 117 GLU B 128 1 12 HELIX 11 11 PHE B 141 GLU B 155 1 15 HELIX 12 12 LYS B 156 ASP B 158 5 3 HELIX 13 13 LEU B 171 SER B 176 1 6 HELIX 14 14 SER B 185 VAL B 203 1 19 SHEET 1 A 7 THR A 31 ILE A 32 0 SHEET 2 A 7 TYR A 35 VAL A 42 -1 O TYR A 35 N ILE A 32 SHEET 3 A 7 LYS A 2 PHE A 9 1 N VAL A 4 O ILE A 38 SHEET 4 A 7 PHE A 64 GLN A 70 1 O ILE A 66 N LEU A 5 SHEET 5 A 7 LYS A 162 ILE A 168 1 O GLY A 164 N CYS A 67 SHEET 6 A 7 ILE A 77 GLU A 80 -1 N THR A 78 O HIS A 167 SHEET 7 A 7 ALA A 132 SER A 135 1 O SER A 135 N ILE A 79 SHEET 1 B 2 VAL A 82 ILE A 84 0 SHEET 2 B 2 ALA A 111 TRP A 113 -1 O TYR A 112 N ALA A 83 SHEET 1 C 7 THR B 31 ILE B 32 0 SHEET 2 C 7 TYR B 35 VAL B 42 -1 O TYR B 35 N ILE B 32 SHEET 3 C 7 LYS B 2 PHE B 9 1 N LEU B 6 O ILE B 38 SHEET 4 C 7 PHE B 64 GLN B 70 1 O ILE B 66 N LEU B 5 SHEET 5 C 7 LYS B 162 ILE B 168 1 O ILE B 166 N CYS B 67 SHEET 6 C 7 ILE B 77 GLU B 80 -1 N THR B 78 O HIS B 167 SHEET 7 C 7 ALA B 132 SER B 135 1 O SER B 133 N ILE B 79 SHEET 1 D 2 VAL B 82 ILE B 84 0 SHEET 2 D 2 ALA B 111 TRP B 113 -1 O TYR B 112 N ALA B 83 LINK C MSE A 1 N LYS A 2 1555 1555 1.33 LINK C PRO A 117 N MSE A 118 1555 1555 1.33 LINK C MSE A 118 N LYS A 119 1555 1555 1.33 LINK C VAL A 142 N CSO A 143 1555 1555 1.33 LINK C CSO A 143 N ASN A 144 1555 1555 1.33 LINK C LEU A 150 N MSE A 151 1555 1555 1.34 LINK C MSE A 151 N HIS A 152 1555 1555 1.33 LINK C LYS A 160 N MSE A 161 1555 1555 1.33 LINK C MSE A 161 N LYS A 162 1555 1555 1.33 LINK C SER A 183 N MSE A 184 1555 1555 1.33 LINK C MSE A 184 N SER A 185 1555 1555 1.32 LINK C MSE B 1 N LYS B 2 1555 1555 1.33 LINK C PRO B 117 N MSE B 118 1555 1555 1.33 LINK C MSE B 118 N LYS B 119 1555 1555 1.33 LINK C VAL B 142 N CSO B 143 1555 1555 1.33 LINK C CSO B 143 N ASN B 144 1555 1555 1.34 LINK C LEU B 150 N MSE B 151 1555 1555 1.33 LINK C MSE B 151 N HIS B 152 1555 1555 1.33 LINK C LYS B 160 N MSE B 161 1555 1555 1.33 LINK C MSE B 161 N LYS B 162 1555 1555 1.33 LINK C SER B 183 N MSE B 184 1555 1555 1.34 LINK C MSE B 184 N SER B 185 1555 1555 1.31 LINK O PRO B 75 MG MG B 217 1555 1555 2.71 LINK O SER B 183 MG MG B 217 1555 1555 2.74 LINK MG MG B 216 O HOH B 377 1555 1555 2.60 SITE 1 AC1 5 HOH A 343 PRO B 179 GLN B 181 PEG B 219 SITE 2 AC1 5 PEG B 220 SITE 1 AC2 4 PRO A 11 GLN A 41 HOH A 292 HOH A 301 SITE 1 AC3 5 ASP A 88 ARG A 90 PHE A 141 HOH A 239 SITE 2 AC3 5 HOH A 270 SITE 1 AC4 5 LYS A 119 LYS A 123 HOH A 325 HOH A 328 SITE 2 AC4 5 ARG B 90 SITE 1 AC5 4 SER B 133 VAL B 134 HOH B 323 HOH B 377 SITE 1 AC6 3 PRO B 75 PRO B 182 SER B 183 SITE 1 AC7 7 ASN A 94 HOH A 308 VAL B 52 GLU B 55 SITE 2 AC7 7 TYR B 56 GLU B 59 HOH B 319 SITE 1 AC8 4 PEG A 216 GLY B 72 GLN B 181 HOH B 225 SITE 1 AC9 3 ARG A 90 GLN A 181 PEG A 216 SITE 1 BC1 7 PHE B 9 ASN B 18 PRO B 19 ALA B 20 SITE 2 BC1 7 GLY B 69 GLN B 70 CSO B 143 SITE 1 BC2 7 GLN A 126 SER A 176 PRO A 179 HOH A 281 SITE 2 BC2 7 HOH A 304 GLU B 95 GLY B 96 CRYST1 78.550 78.550 141.040 90.00 90.00 90.00 P 43 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012730 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012730 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007090 0.00000 HETATM 1 N MSE A 1 9.907 90.803 74.123 1.00 60.14 N HETATM 2 CA MSE A 1 10.891 89.688 74.254 1.00 59.85 C HETATM 3 C MSE A 1 10.282 88.346 74.701 1.00 56.91 C HETATM 4 O MSE A 1 9.794 88.198 75.827 1.00 56.85 O HETATM 5 CB MSE A 1 12.030 90.097 75.193 1.00 61.75 C HETATM 6 CG MSE A 1 12.970 91.137 74.607 1.00 69.91 C HETATM 7 SE MSE A 1 13.496 90.677 72.771 1.00 91.65 SE HETATM 8 CE MSE A 1 14.242 92.415 72.223 1.00 85.94 C