HEADER TRANSFERASE 15-JAN-10 3LET TITLE CRYSTAL STRUCTURE OF FIC DOMAIN CONTAINING AMPYLATOR, VOPS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENOSINE MONOPHOSPHATE-PROTEIN TRANSFERASE VOPS; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 75-387; COMPND 5 SYNONYM: AMPYLATOR VOPS, VIBRIO OUTER PROTEIN S; COMPND 6 EC: 2.7.7.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO PARAHAEMOLYTICUS; SOURCE 3 ORGANISM_TAXID: 670; SOURCE 4 STRAIN: POR1; SOURCE 5 GENE: VOPS, VP 1686, VP1686; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEXTEV KEYWDS AMPYLATION, FIC DOMAIN, VIBRIO, TYPE III, EFFECTOR, T3SS, KEYWDS 2 NUCLEOTIDYLTRANSFERASE, VIRULENCE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR P.H.LUONG,L.N.KINCH,C.A.BRAUTIGAM,N.V.GRISHIN,D.R.TOMCHICK,K.ORTH REVDAT 4 21-FEB-24 3LET 1 SEQADV REVDAT 3 24-JAN-18 3LET 1 JRNL REVDAT 2 01-NOV-17 3LET 1 REMARK REVDAT 1 21-APR-10 3LET 0 JRNL AUTH P.H.LUONG,L.N.KINCH,C.A.BRAUTIGAM,N.V.GRISHIN,D.R.TOMCHICK, JRNL AUTH 2 K.ORTH JRNL TITL STRUCTURAL AND KINETIC ANALYSIS OF VOPS WITH FIC DOMAIN JRNL TITL 2 SUPPORTS A DIRECT TRANSFER MECHANISM FOR AMPYLATION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.YARBROUGH,Y.LI,L.N.KINCH,N.V.GRISHIN,H.L.BALL,K.ORTH REMARK 1 TITL AMPYLATION OF RHO GTPASES BY VIBRIO VOPS DISRUPTS EFFECTOR REMARK 1 TITL 2 BINDING AND DOWNSTREAM SIGNALING REMARK 1 REF SCIENCE V. 323 269 2008 REMARK 1 REFN ISSN 0036-8075 REMARK 1 REFERENCE 2 REMARK 1 AUTH L.N.KINCH,M.YARBROUGH,K.ORTH,N.V.GRISHIN REMARK 1 TITL FIDO, A NOVEL AMPYLATION DOMAIN COMMMON TO FIC, DOC, AND REMARK 1 TITL 2 AVRB REMARK 1 REF PLOS ONE V. 4 E5818 2009 REMARK 1 REFN ESSN 1932-6203 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.13 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 57380 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 2909 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.1436 - 3.8817 0.99 5534 324 0.1662 0.1881 REMARK 3 2 3.8817 - 3.0811 1.00 5489 297 0.1669 0.2204 REMARK 3 3 3.0811 - 2.6917 1.00 5466 285 0.1753 0.2433 REMARK 3 4 2.6917 - 2.4456 1.00 5447 295 0.1577 0.2130 REMARK 3 5 2.4456 - 2.2703 1.00 5445 310 0.1565 0.2132 REMARK 3 6 2.2703 - 2.1365 1.00 5437 274 0.1567 0.2089 REMARK 3 7 2.1365 - 2.0295 1.00 5426 286 0.1760 0.2481 REMARK 3 8 2.0295 - 1.9411 1.00 5411 295 0.1979 0.2602 REMARK 3 9 1.9411 - 1.8664 1.00 5453 280 0.2147 0.2759 REMARK 3 10 1.8664 - 1.8020 0.99 5363 263 0.2468 0.3150 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.38 REMARK 3 B_SOL : 42.48 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.550 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.65700 REMARK 3 B22 (A**2) : 3.09400 REMARK 3 B33 (A**2) : -3.75100 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.42100 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 9289 REMARK 3 ANGLE : 0.887 16793 REMARK 3 CHIRALITY : 0.073 702 REMARK 3 PLANARITY : 0.004 1515 REMARK 3 DIHEDRAL : 14.412 2343 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 21 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESID 86:109 REMARK 3 ORIGIN FOR THE GROUP (A): 27.5717 20.2447 34.0514 REMARK 3 T TENSOR REMARK 3 T11: 0.2748 T22: 0.2127 REMARK 3 T33: 0.2877 T12: -0.0427 REMARK 3 T13: -0.0778 T23: 0.0260 REMARK 3 L TENSOR REMARK 3 L11: 1.5995 L22: 1.5329 REMARK 3 L33: 0.9754 L12: -0.9095 REMARK 3 L13: 1.2334 L23: -0.9629 REMARK 3 S TENSOR REMARK 3 S11: 0.1138 S12: -0.0624 S13: -0.4905 REMARK 3 S21: -0.3097 S22: 0.1738 S23: 0.5456 REMARK 3 S31: 0.3370 S32: -0.1380 S33: -0.3274 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESID 110:126 REMARK 3 ORIGIN FOR THE GROUP (A): 34.7620 27.2037 29.1545 REMARK 3 T TENSOR REMARK 3 T11: 0.1905 T22: 0.2369 REMARK 3 T33: 0.1647 T12: 0.0396 REMARK 3 T13: -0.0033 T23: 0.0155 REMARK 3 L TENSOR REMARK 3 L11: 0.3907 L22: 0.8088 REMARK 3 L33: 0.2997 L12: 0.3638 REMARK 3 L13: -0.0264 L23: 0.3788 REMARK 3 S TENSOR REMARK 3 S11: 0.0150 S12: 0.2247 S13: 0.0081 REMARK 3 S21: -0.0160 S22: 0.0032 S23: 0.1549 REMARK 3 S31: 0.1980 S32: 0.2210 S33: -0.0072 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND RESID 127:164 REMARK 3 ORIGIN FOR THE GROUP (A): 36.7225 26.5547 44.3491 REMARK 3 T TENSOR REMARK 3 T11: 0.0977 T22: 0.1436 REMARK 3 T33: 0.1113 T12: 0.0162 REMARK 3 T13: -0.0088 T23: -0.0015 REMARK 3 L TENSOR REMARK 3 L11: 0.3930 L22: 0.1571 REMARK 3 L33: 1.3693 L12: -0.1962 REMARK 3 L13: 0.4534 L23: -0.2412 REMARK 3 S TENSOR REMARK 3 S11: 0.0100 S12: 0.1210 S13: 0.0156 REMARK 3 S21: 0.0124 S22: -0.0030 S23: 0.0070 REMARK 3 S31: -0.0845 S32: 0.0617 S33: -0.0100 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND RESID 165:225 REMARK 3 ORIGIN FOR THE GROUP (A): 46.2179 31.9582 55.1425 REMARK 3 T TENSOR REMARK 3 T11: 0.1202 T22: 0.1591 REMARK 3 T33: 0.1329 T12: -0.0241 REMARK 3 T13: -0.0289 T23: 0.0055 REMARK 3 L TENSOR REMARK 3 L11: 1.5734 L22: 0.2109 REMARK 3 L33: 3.1848 L12: -0.1333 REMARK 3 L13: 1.5375 L23: 0.5270 REMARK 3 S TENSOR REMARK 3 S11: -0.1789 S12: 0.1142 S13: 0.1170 REMARK 3 S21: -0.0325 S22: 0.0989 S23: -0.0068 REMARK 3 S31: -0.2958 S32: 0.3833 S33: 0.0695 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND RESID 226:255 REMARK 3 ORIGIN FOR THE GROUP (A): 38.4593 40.2293 90.5242 REMARK 3 T TENSOR REMARK 3 T11: 0.1619 T22: 0.1053 REMARK 3 T33: 0.1341 T12: 0.0186 REMARK 3 T13: 0.0049 T23: -0.0305 REMARK 3 L TENSOR REMARK 3 L11: 0.9280 L22: 1.6410 REMARK 3 L33: 1.5370 L12: 1.0780 REMARK 3 L13: -0.5720 L23: 0.0928 REMARK 3 S TENSOR REMARK 3 S11: 0.1028 S12: -0.1736 S13: 0.2208 REMARK 3 S21: 0.2028 S22: 0.1390 S23: 0.1385 REMARK 3 S31: -0.0958 S32: 0.0179 S33: -0.1408 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN A AND RESID 256:275 REMARK 3 ORIGIN FOR THE GROUP (A): 27.4716 33.8462 83.5865 REMARK 3 T TENSOR REMARK 3 T11: 0.1546 T22: 0.1324 REMARK 3 T33: 0.1498 T12: -0.0269 REMARK 3 T13: 0.0277 T23: -0.0202 REMARK 3 L TENSOR REMARK 3 L11: 1.1073 L22: -0.1690 REMARK 3 L33: 2.6429 L12: -0.8677 REMARK 3 L13: -0.4703 L23: -0.2426 REMARK 3 S TENSOR REMARK 3 S11: -0.1056 S12: -0.1441 S13: 0.1100 REMARK 3 S21: 0.0410 S22: 0.1029 S23: 0.0044 REMARK 3 S31: 0.1877 S32: -0.2693 S33: 0.0239 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN A AND RESID 276:295 REMARK 3 ORIGIN FOR THE GROUP (A): 30.0668 30.5964 71.9265 REMARK 3 T TENSOR REMARK 3 T11: 0.1360 T22: 0.1160 REMARK 3 T33: 0.1307 T12: -0.0153 REMARK 3 T13: 0.0264 T23: -0.0022 REMARK 3 L TENSOR REMARK 3 L11: 0.9742 L22: 0.4959 REMARK 3 L33: 1.1980 L12: -0.0677 REMARK 3 L13: -0.4887 L23: 0.6979 REMARK 3 S TENSOR REMARK 3 S11: 0.1462 S12: 0.0008 S13: -0.0395 REMARK 3 S21: -0.0109 S22: -0.0296 S23: 0.0567 REMARK 3 S31: 0.0457 S32: -0.2465 S33: -0.0690 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN A AND RESID 296:329 REMARK 3 ORIGIN FOR THE GROUP (A): 41.6842 30.2931 63.1234 REMARK 3 T TENSOR REMARK 3 T11: 0.0873 T22: 0.0943 REMARK 3 T33: 0.1188 T12: 0.0041 REMARK 3 T13: -0.0117 T23: -0.0083 REMARK 3 L TENSOR REMARK 3 L11: 0.1428 L22: 0.2304 REMARK 3 L33: 0.5785 L12: 0.1357 REMARK 3 L13: 0.1989 L23: 0.7231 REMARK 3 S TENSOR REMARK 3 S11: -0.0282 S12: -0.0412 S13: 0.1223 REMARK 3 S21: -0.0752 S22: 0.0036 S23: -0.0939 REMARK 3 S31: -0.1241 S32: -0.0168 S33: 0.0106 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN A AND RESID 330:374 REMARK 3 ORIGIN FOR THE GROUP (A): 40.9734 30.3880 79.3300 REMARK 3 T TENSOR REMARK 3 T11: 0.1097 T22: 0.1077 REMARK 3 T33: 0.1174 T12: 0.0238 REMARK 3 T13: -0.0253 T23: 0.0015 REMARK 3 L TENSOR REMARK 3 L11: 0.4843 L22: 0.5572 REMARK 3 L33: 0.9263 L12: 0.1838 REMARK 3 L13: 0.1806 L23: 0.6298 REMARK 3 S TENSOR REMARK 3 S11: -0.0115 S12: -0.0596 S13: -0.1097 REMARK 3 S21: 0.1250 S22: -0.0133 S23: -0.0698 REMARK 3 S31: 0.0735 S32: 0.0379 S33: 0.0118 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN A AND RESID 375:387 REMARK 3 ORIGIN FOR THE GROUP (A): 49.8290 38.6830 77.6828 REMARK 3 T TENSOR REMARK 3 T11: 0.1945 T22: 0.1571 REMARK 3 T33: 0.1427 T12: -0.0409 REMARK 3 T13: -0.0281 T23: -0.0142 REMARK 3 L TENSOR REMARK 3 L11: 0.8643 L22: 0.4483 REMARK 3 L33: 6.6560 L12: 0.4488 REMARK 3 L13: 0.7619 L23: -1.2157 REMARK 3 S TENSOR REMARK 3 S11: 0.0092 S12: 0.1106 S13: 0.0412 REMARK 3 S21: 0.1238 S22: 0.0633 S23: 0.1838 REMARK 3 S31: -0.6254 S32: 0.3249 S33: 0.0386 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN B AND RESID 80:85 REMARK 3 ORIGIN FOR THE GROUP (A): 93.1911 14.7069 77.8788 REMARK 3 T TENSOR REMARK 3 T11: 0.6243 T22: 0.3075 REMARK 3 T33: 0.4087 T12: 0.0130 REMARK 3 T13: 0.0154 T23: -0.0028 REMARK 3 L TENSOR REMARK 3 L11: 1.8577 L22: -1.8848 REMARK 3 L33: 5.2315 L12: 1.7686 REMARK 3 L13: -1.6795 L23: -1.3785 REMARK 3 S TENSOR REMARK 3 S11: 0.1028 S12: 0.1155 S13: -0.2957 REMARK 3 S21: 1.2008 S22: -0.4671 S23: 0.4297 REMARK 3 S31: -0.6813 S32: 0.0595 S33: 0.2754 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN B AND RESID 86:109 REMARK 3 ORIGIN FOR THE GROUP (A): 81.1504 19.9990 71.3788 REMARK 3 T TENSOR REMARK 3 T11: 0.1515 T22: 0.1426 REMARK 3 T33: 0.2689 T12: 0.0074 REMARK 3 T13: -0.0386 T23: 0.0218 REMARK 3 L TENSOR REMARK 3 L11: 2.3134 L22: 1.7721 REMARK 3 L33: 1.6065 L12: 0.8570 REMARK 3 L13: 1.0595 L23: 0.6070 REMARK 3 S TENSOR REMARK 3 S11: 0.4443 S12: 0.0419 S13: -0.7051 REMARK 3 S21: 0.0337 S22: -0.1352 S23: -0.5139 REMARK 3 S31: 0.2058 S32: 0.1932 S33: -0.2432 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN B AND RESID 110:126 REMARK 3 ORIGIN FOR THE GROUP (A): 73.8545 26.9445 76.6981 REMARK 3 T TENSOR REMARK 3 T11: 0.1586 T22: 0.1719 REMARK 3 T33: 0.1465 T12: -0.0309 REMARK 3 T13: -0.0011 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 2.0480 L22: 0.7835 REMARK 3 L33: 0.1563 L12: 0.2294 REMARK 3 L13: 0.5443 L23: -0.0669 REMARK 3 S TENSOR REMARK 3 S11: -0.0094 S12: -0.1509 S13: -0.1388 REMARK 3 S21: 0.0009 S22: 0.1883 S23: -0.0118 REMARK 3 S31: 0.0059 S32: -0.0310 S33: -0.1332 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN B AND RESID 127:164 REMARK 3 ORIGIN FOR THE GROUP (A): 71.9657 26.6297 61.6161 REMARK 3 T TENSOR REMARK 3 T11: 0.1252 T22: 0.1531 REMARK 3 T33: 0.1365 T12: -0.0291 REMARK 3 T13: -0.0224 T23: 0.0032 REMARK 3 L TENSOR REMARK 3 L11: -0.0102 L22: 0.4325 REMARK 3 L33: 0.5620 L12: -0.0510 REMARK 3 L13: -0.1499 L23: 0.2324 REMARK 3 S TENSOR REMARK 3 S11: 0.0306 S12: 0.0236 S13: 0.0138 REMARK 3 S21: -0.0506 S22: -0.0005 S23: -0.1008 REMARK 3 S31: 0.0066 S32: -0.1027 S33: -0.0172 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN B AND RESID 165:220 REMARK 3 ORIGIN FOR THE GROUP (A): 63.1935 31.4606 53.3814 REMARK 3 T TENSOR REMARK 3 T11: 0.0898 T22: 0.1793 REMARK 3 T33: 0.0925 T12: -0.0136 REMARK 3 T13: -0.0108 T23: 0.0024 REMARK 3 L TENSOR REMARK 3 L11: 1.5524 L22: 0.3204 REMARK 3 L33: 1.9966 L12: 0.1979 REMARK 3 L13: 0.2405 L23: -0.6871 REMARK 3 S TENSOR REMARK 3 S11: -0.1599 S12: 0.1271 S13: 0.0646 REMARK 3 S21: -0.0144 S22: 0.1526 S23: -0.0185 REMARK 3 S31: -0.0842 S32: -0.2871 S33: 0.0132 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN B AND RESID 221:255 REMARK 3 ORIGIN FOR THE GROUP (A): 67.1436 38.3248 16.2830 REMARK 3 T TENSOR REMARK 3 T11: 0.1847 T22: 0.1902 REMARK 3 T33: 0.1011 T12: 0.0334 REMARK 3 T13: -0.0260 T23: 0.0124 REMARK 3 L TENSOR REMARK 3 L11: 0.3970 L22: 1.7975 REMARK 3 L33: 2.3080 L12: -0.5944 REMARK 3 L13: -0.2169 L23: 0.4515 REMARK 3 S TENSOR REMARK 3 S11: 0.1948 S12: 0.0597 S13: 0.1426 REMARK 3 S21: -0.3440 S22: -0.0575 S23: -0.0537 REMARK 3 S31: -0.2069 S32: -0.5187 S33: -0.1060 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN B AND RESID 256:275 REMARK 3 ORIGIN FOR THE GROUP (A): 80.9363 34.0044 22.2471 REMARK 3 T TENSOR REMARK 3 T11: 0.1472 T22: 0.1535 REMARK 3 T33: 0.1807 T12: 0.0254 REMARK 3 T13: 0.0030 T23: 0.0221 REMARK 3 L TENSOR REMARK 3 L11: 1.4545 L22: 1.8605 REMARK 3 L33: 0.5886 L12: -0.9432 REMARK 3 L13: -0.4639 L23: 0.1702 REMARK 3 S TENSOR REMARK 3 S11: -0.0521 S12: 0.1356 S13: 0.2527 REMARK 3 S21: 0.0611 S22: 0.1839 S23: -0.1423 REMARK 3 S31: 0.0806 S32: 0.0300 S33: -0.0951 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN B AND RESID 276:292 REMARK 3 ORIGIN FOR THE GROUP (A): 78.0875 29.0567 32.9934 REMARK 3 T TENSOR REMARK 3 T11: 0.1661 T22: 0.1522 REMARK 3 T33: 0.1180 T12: 0.0353 REMARK 3 T13: -0.0052 T23: 0.0417 REMARK 3 L TENSOR REMARK 3 L11: 0.8182 L22: 2.2908 REMARK 3 L33: 2.5481 L12: -0.9380 REMARK 3 L13: -1.1623 L23: -1.1967 REMARK 3 S TENSOR REMARK 3 S11: -0.2396 S12: -0.2314 S13: -0.1017 REMARK 3 S21: 0.1488 S22: 0.1704 S23: -0.0478 REMARK 3 S31: 0.3584 S32: 0.2838 S33: 0.0861 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN B AND RESID 293:326 REMARK 3 ORIGIN FOR THE GROUP (A): 68.6195 33.2353 43.7317 REMARK 3 T TENSOR REMARK 3 T11: 0.1364 T22: 0.1961 REMARK 3 T33: 0.1272 T12: -0.0122 REMARK 3 T13: -0.0112 T23: 0.0326 REMARK 3 L TENSOR REMARK 3 L11: 0.5586 L22: 1.1670 REMARK 3 L33: 2.0004 L12: 0.5913 REMARK 3 L13: -1.1382 L23: -1.2669 REMARK 3 S TENSOR REMARK 3 S11: -0.0683 S12: 0.1636 S13: 0.0533 REMARK 3 S21: -0.0574 S22: 0.0021 S23: 0.0764 REMARK 3 S31: 0.2068 S32: -0.0754 S33: 0.0349 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN B AND RESID 327:335 REMARK 3 ORIGIN FOR THE GROUP (A): 63.7201 17.9651 27.5899 REMARK 3 T TENSOR REMARK 3 T11: 0.5761 T22: 0.3034 REMARK 3 T33: 0.1665 T12: -0.0670 REMARK 3 T13: 0.1273 T23: -0.0692 REMARK 3 L TENSOR REMARK 3 L11: 0.2409 L22: 3.9045 REMARK 3 L33: -4.2120 L12: 0.0467 REMARK 3 L13: -1.6418 L23: 2.4566 REMARK 3 S TENSOR REMARK 3 S11: -0.2745 S12: 0.3355 S13: -0.3392 REMARK 3 S21: -0.9524 S22: -0.0851 S23: 0.1539 REMARK 3 S31: 0.0048 S32: -0.2357 S33: 0.2779 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN B AND RESID 336:386 REMARK 3 ORIGIN FOR THE GROUP (A): 66.3012 32.7199 27.1877 REMARK 3 T TENSOR REMARK 3 T11: 0.1020 T22: 0.2050 REMARK 3 T33: 0.0946 T12: -0.0168 REMARK 3 T13: -0.0085 T23: -0.0008 REMARK 3 L TENSOR REMARK 3 L11: 0.6300 L22: 0.4309 REMARK 3 L33: 2.6561 L12: 0.2173 REMARK 3 L13: -0.0425 L23: -0.0982 REMARK 3 S TENSOR REMARK 3 S11: 0.0106 S12: -0.1111 S13: 0.0090 REMARK 3 S21: -0.0163 S22: -0.0344 S23: 0.0312 REMARK 3 S31: 0.0745 S32: -0.5398 S33: 0.0132 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3LET COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-JAN-10. REMARK 100 THE DEPOSITION ID IS D_1000057189. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-DEC-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57468 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.84000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 21% PEG 3350, 0.1M HEPES PH 7.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 31.16250 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 74 REMARK 465 ALA A 75 REMARK 465 ILE A 76 REMARK 465 THR A 77 REMARK 465 LYS A 78 REMARK 465 ALA A 79 REMARK 465 VAL A 80 REMARK 465 PHE A 81 REMARK 465 ASP A 82 REMARK 465 ASN A 83 REMARK 465 GLU A 84 REMARK 465 GLN A 85 REMARK 465 GLY B 74 REMARK 465 ALA B 75 REMARK 465 ILE B 76 REMARK 465 LYS B 387 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET B 142 CG - SD - CE ANGL. DEV. = -10.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 185 63.72 -159.35 REMARK 500 TYR A 224 -19.55 -48.06 REMARK 500 LEU A 278 57.43 -91.27 REMARK 500 LYS B 78 -169.51 -64.74 REMARK 500 ASN B 185 67.15 -155.15 REMARK 500 LEU B 278 46.96 -94.44 REMARK 500 PHE B 372 114.79 -161.17 REMARK 500 REMARK 500 REMARK: NULL DBREF 3LET A 75 387 UNP Q87P32 VOPS_VIBPA 75 387 DBREF 3LET B 75 387 UNP Q87P32 VOPS_VIBPA 75 387 SEQADV 3LET GLY A 74 UNP Q87P32 EXPRESSION TAG SEQADV 3LET GLY B 74 UNP Q87P32 EXPRESSION TAG SEQRES 1 A 314 GLY ALA ILE THR LYS ALA VAL PHE ASP ASN GLU GLN GLY SEQRES 2 A 314 GLN ALA GLN ARG LEU GLN THR SER SER SER VAL GLU HIS SEQRES 3 A 314 GLY GLN MET LEU PHE LYS ASP ALA ASN LEU LYS THR PRO SEQRES 4 A 314 SER ASP VAL LEU ASN ALA PHE ALA LYS LEU ASP SER LYS SEQRES 5 A 314 MET VAL LYS SER HIS ALA ALA GLU LEU SER GLN LEU ALA SEQRES 6 A 314 GLU ARG ALA MET THR GLU VAL MET LEU GLU THR ASP SER SEQRES 7 A 314 GLY LYS ASN LEU LYS ALA LEU ILE GLY ASP ASP ALA VAL SEQRES 8 A 314 LYS SER LEU ALA VAL ARG VAL VAL LYS ASP TYR GLY GLY SEQRES 9 A 314 GLY VAL ALA ALA ALA GLN LYS ASN PRO GLU VAL ARG ILE SEQRES 10 A 314 ASN GLN MET GLN ALA VAL PHE ASP MET GLU VAL MET HIS SEQRES 11 A 314 LEU LYS ALA ALA GLN ARG HIS ILE GLU GLY LEU ALA SER SEQRES 12 A 314 THR ASP LEU ASN GLN GLY VAL TYR ALA GLU GLY LEU PRO SEQRES 13 A 314 GLU ASP ALA PHE ASN LYS ALA GLY VAL THR ASN ASN VAL SEQRES 14 A 314 GLU ARG ALA ALA ALA TRP ILE ILE ASN ALA SER ASN SER SEQRES 15 A 314 LYS GLY ASN ASP ALA GLU ASN ILE THR SER LEU LEU LYS SEQRES 16 A 314 GLU TYR ALA THR ASN GLY LYS ASP LEU LEU ASN MET ASP SEQRES 17 A 314 ASN LEU LYS GLU LEU HIS ALA ARG LEU VAL PRO ASN VAL SEQRES 18 A 314 GLU ARG ASP TYR ARG GLY PRO ASN ILE SER GLY GLY THR SEQRES 19 A 314 LEU PRO SER SER ILE GLY GLY GLU GLY MET LEU LYS GLN SEQRES 20 A 314 HIS ILE GLU GLY PHE LEU LYS GLU ASN PRO VAL ALA ASP SEQRES 21 A 314 LYS ASP LEU GLY LYS HIS LEU PHE ALA GLY VAL ILE GLY SEQRES 22 A 314 TYR HIS GLY PHE THR ASP GLY ASN GLY ARG MET GLY ARG SEQRES 23 A 314 MET LEU TYR ALA ILE ALA GLU LEU ARG ASN ASP SER PHE SEQRES 24 A 314 ASN PRO LEU ALA MET ASN ALA GLU ASN SER LEU HIS GLY SEQRES 25 A 314 ILE LYS SEQRES 1 B 314 GLY ALA ILE THR LYS ALA VAL PHE ASP ASN GLU GLN GLY SEQRES 2 B 314 GLN ALA GLN ARG LEU GLN THR SER SER SER VAL GLU HIS SEQRES 3 B 314 GLY GLN MET LEU PHE LYS ASP ALA ASN LEU LYS THR PRO SEQRES 4 B 314 SER ASP VAL LEU ASN ALA PHE ALA LYS LEU ASP SER LYS SEQRES 5 B 314 MET VAL LYS SER HIS ALA ALA GLU LEU SER GLN LEU ALA SEQRES 6 B 314 GLU ARG ALA MET THR GLU VAL MET LEU GLU THR ASP SER SEQRES 7 B 314 GLY LYS ASN LEU LYS ALA LEU ILE GLY ASP ASP ALA VAL SEQRES 8 B 314 LYS SER LEU ALA VAL ARG VAL VAL LYS ASP TYR GLY GLY SEQRES 9 B 314 GLY VAL ALA ALA ALA GLN LYS ASN PRO GLU VAL ARG ILE SEQRES 10 B 314 ASN GLN MET GLN ALA VAL PHE ASP MET GLU VAL MET HIS SEQRES 11 B 314 LEU LYS ALA ALA GLN ARG HIS ILE GLU GLY LEU ALA SER SEQRES 12 B 314 THR ASP LEU ASN GLN GLY VAL TYR ALA GLU GLY LEU PRO SEQRES 13 B 314 GLU ASP ALA PHE ASN LYS ALA GLY VAL THR ASN ASN VAL SEQRES 14 B 314 GLU ARG ALA ALA ALA TRP ILE ILE ASN ALA SER ASN SER SEQRES 15 B 314 LYS GLY ASN ASP ALA GLU ASN ILE THR SER LEU LEU LYS SEQRES 16 B 314 GLU TYR ALA THR ASN GLY LYS ASP LEU LEU ASN MET ASP SEQRES 17 B 314 ASN LEU LYS GLU LEU HIS ALA ARG LEU VAL PRO ASN VAL SEQRES 18 B 314 GLU ARG ASP TYR ARG GLY PRO ASN ILE SER GLY GLY THR SEQRES 19 B 314 LEU PRO SER SER ILE GLY GLY GLU GLY MET LEU LYS GLN SEQRES 20 B 314 HIS ILE GLU GLY PHE LEU LYS GLU ASN PRO VAL ALA ASP SEQRES 21 B 314 LYS ASP LEU GLY LYS HIS LEU PHE ALA GLY VAL ILE GLY SEQRES 22 B 314 TYR HIS GLY PHE THR ASP GLY ASN GLY ARG MET GLY ARG SEQRES 23 B 314 MET LEU TYR ALA ILE ALA GLU LEU ARG ASN ASP SER PHE SEQRES 24 B 314 ASN PRO LEU ALA MET ASN ALA GLU ASN SER LEU HIS GLY SEQRES 25 B 314 ILE LYS FORMUL 3 HOH *514(H2 O) HELIX 1 1 GLY A 86 GLN A 92 1 7 HELIX 2 2 SER A 95 PHE A 104 1 10 HELIX 3 3 THR A 111 PHE A 119 1 9 HELIX 4 4 ALA A 120 LEU A 122 5 3 HELIX 5 5 ASP A 123 HIS A 130 1 8 HELIX 6 6 HIS A 130 THR A 149 1 20 HELIX 7 7 THR A 149 GLY A 160 1 12 HELIX 8 8 GLY A 160 GLY A 176 1 17 HELIX 9 9 GLY A 177 ASN A 185 1 9 HELIX 10 10 ASN A 185 GLY A 213 1 29 HELIX 11 11 LEU A 214 THR A 217 5 4 HELIX 12 12 PRO A 229 ASN A 234 1 6 HELIX 13 13 ASN A 240 SER A 253 1 14 HELIX 14 14 LYS A 256 ASN A 273 1 18 HELIX 15 15 ASN A 279 VAL A 291 1 13 HELIX 16 16 SER A 310 GLY A 324 1 15 HELIX 17 17 GLY A 324 ASN A 329 1 6 HELIX 18 18 ALA A 332 HIS A 348 1 17 HELIX 19 19 GLY A 353 ASN A 369 1 17 HELIX 20 20 ALA A 376 GLY A 385 1 10 HELIX 21 21 GLY B 86 GLN B 92 1 7 HELIX 22 22 SER B 95 PHE B 104 1 10 HELIX 23 23 THR B 111 PHE B 119 1 9 HELIX 24 24 ALA B 120 LEU B 122 5 3 HELIX 25 25 ASP B 123 HIS B 130 1 8 HELIX 26 26 HIS B 130 GLU B 148 1 19 HELIX 27 27 THR B 149 GLY B 160 1 12 HELIX 28 28 GLY B 160 GLY B 176 1 17 HELIX 29 29 GLY B 177 ASN B 185 1 9 HELIX 30 30 ASN B 185 LEU B 214 1 30 HELIX 31 31 ALA B 215 THR B 217 5 3 HELIX 32 32 GLN B 221 GLU B 226 5 6 HELIX 33 33 PRO B 229 PHE B 233 5 5 HELIX 34 34 ASN B 240 ASN B 254 1 15 HELIX 35 35 LYS B 256 ASN B 273 1 18 HELIX 36 36 ASN B 279 VAL B 291 1 13 HELIX 37 37 SER B 310 GLY B 324 1 15 HELIX 38 38 GLY B 324 ASN B 329 1 6 HELIX 39 39 ALA B 332 TYR B 347 1 16 HELIX 40 40 GLY B 353 ASN B 369 1 17 HELIX 41 41 ALA B 376 GLY B 385 1 10 CRYST1 66.669 62.325 75.762 90.00 91.31 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014999 0.000000 0.000343 0.00000 SCALE2 0.000000 0.016045 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013203 0.00000