HEADER TRANSFERASE 27-JAN-10 3LKM
TITLE 1.6 ANGSTROM CRYSTAL STRUCTURE OF THE ALPHA-KINASE DOMAIN OF MYOSIN
TITLE 2 HEAVY CHAIN KINASE A COMPLEX WITH AMP
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: MYOSIN HEAVY CHAIN KINASE A;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: UNP RESIDUES 552-841;
COMPND 5 SYNONYM: MHCK-A;
COMPND 6 EC: 2.7.11.7;
COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: DICTYOSTELIUM DISCOIDEUM;
SOURCE 3 ORGANISM_COMMON: SLIME MOLD;
SOURCE 4 ORGANISM_TAXID: 44689;
SOURCE 5 STRAIN: AX3;
SOURCE 6 GENE: DDB_G0291231, MHCKA, MHKA;
SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);
SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET28A
KEYWDS PROTEIN KINASE-LIKE FOLD, ATP-BINDING, KINASE, NUCLEOTIDE-BINDING,
KEYWDS 2 SERINE/THREONINE-PROTEIN KINASE, ALPHA-KINASE, COILED COIL, WD
KEYWDS 3 REPEAT, TRANSFERASE
EXPDTA X-RAY DIFFRACTION
AUTHOR Q.YE,Z.JIA
REVDAT 2 21-FEB-24 3LKM 1 REMARK SEQADV LINK
REVDAT 1 16-MAR-10 3LKM 0
JRNL AUTH Q.YE,S.W.CRAWLEY,Y.YANG,G.P.COTE,Z.JIA
JRNL TITL CRYSTAL STRUCTURE OF THE {ALPHA}-KINASE DOMAIN OF
JRNL TITL 2 DICTYOSTELIUM MYOSIN HEAVY CHAIN KINASE A.
JRNL REF SCI.SIGNAL. V. 3 RA17 2010
JRNL REFN ESSN 1937-9145
JRNL PMID 20197546
JRNL DOI 10.1126/SCISIGNAL.2000525
REMARK 2
REMARK 2 RESOLUTION. 1.60 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : REFMAC 5.4.0069
REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,
REMARK 3 : NICHOLLS,WINN,LONG,VAGIN
REMARK 3
REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.28
REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL
REMARK 3 COMPLETENESS FOR RANGE (%) : 96.2
REMARK 3 NUMBER OF REFLECTIONS : 34910
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.195
REMARK 3 R VALUE (WORKING SET) : 0.194
REMARK 3 FREE R VALUE : 0.224
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000
REMARK 3 FREE R VALUE TEST SET COUNT : 1849
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64
REMARK 3 REFLECTION IN BIN (WORKING SET) : 1941
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 73.42
REMARK 3 BIN R VALUE (WORKING SET) : 0.2120
REMARK 3 BIN FREE R VALUE SET COUNT : 103
REMARK 3 BIN FREE R VALUE : 0.2480
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 1964
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 37
REMARK 3 SOLVENT ATOMS : 305
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.73
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : 0.01000
REMARK 3 B22 (A**2) : -0.05000
REMARK 3 B33 (A**2) : 0.04000
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED OVERALL COORDINATE ERROR.
REMARK 3 ESU BASED ON R VALUE (A): 0.096
REMARK 3 ESU BASED ON FREE R VALUE (A): 0.095
REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.050
REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.357
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT
REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2039 ; 0.006 ; 0.022
REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL
REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2755 ; 1.135 ; 1.989
REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL
REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 244 ; 5.666 ; 5.000
REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 88 ;37.799 ;25.341
REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 373 ;11.660 ;15.000
REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;17.660 ;15.000
REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 300 ; 0.073 ; 0.200
REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1498 ; 0.004 ; 0.021
REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1228 ; 0.591 ; 1.500
REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1988 ; 1.155 ; 2.000
REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 811 ; 1.745 ; 3.000
REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 767 ; 2.918 ; 4.500
REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 NCS RESTRAINTS STATISTICS
REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : NULL
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : MASK
REMARK 3 PARAMETERS FOR MASK CALCULATION
REMARK 3 VDW PROBE RADIUS : 1.20
REMARK 3 ION PROBE RADIUS : 0.80
REMARK 3 SHRINKAGE RADIUS : 0.80
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING
REMARK 3 POSITIONS
REMARK 4
REMARK 4 3LKM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-JAN-10.
REMARK 100 THE DEPOSITION ID IS D_1000057392.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 18-APR-07; 22-MAR-07
REMARK 200 TEMPERATURE (KELVIN) : 100; NULL
REMARK 200 PH : 7.5
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y; N
REMARK 200 RADIATION SOURCE : CHESS; ROTATING ANODE
REMARK 200 BEAMLINE : F1; NULL
REMARK 200 X-RAY GENERATOR MODEL : NULL; RIGAKU MICROMAX-007 HF
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL
REMARK 200 WAVELENGTH OR RANGE (A) : 0.918; 2.29
REMARK 200 MONOCHROMATOR : NULL; NULL
REMARK 200 OPTICS : NULL; CR VARIMAX MULTILAYER
REMARK 200 OPTICS
REMARK 200
REMARK 200 DETECTOR TYPE : CCD; IMAGE PLATE
REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 1; RIGAKU RAXIS IV
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO
REMARK 200 DATA SCALING SOFTWARE : SCALEPACK
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37007
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600
REMARK 200 RESOLUTION RANGE LOW (A) : 50.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6
REMARK 200 DATA REDUNDANCY : 10.30
REMARK 200 R MERGE (I) : 0.06600
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 46.5200
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66
REMARK 200 COMPLETENESS FOR SHELL (%) : 78.7
REMARK 200 DATA REDUNDANCY IN SHELL : 5.70
REMARK 200 R MERGE FOR SHELL (I) : 0.19000
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 9.770
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; NULL
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD
REMARK 200 SOFTWARE USED: SHARP
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 43.48
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.2M POTASSIUM
REMARK 280 PHOSPHATE, 0.1M TRIS-HCL, PH 7.5, VAPOR DIFFUSION, HANGING DROP,
REMARK 280 TEMPERATURE 277K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,-Y,Z
REMARK 290 3555 -X+1/2,Y+1/2,-Z
REMARK 290 4555 X+1/2,-Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 38.11200
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.88850
REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.11200
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.88850
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 375
REMARK 375 SPECIAL POSITION
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL
REMARK 375 POSITIONS.
REMARK 375
REMARK 375 ATOM RES CSSEQI
REMARK 375 HOH A 203 LIES ON A SPECIAL POSITION.
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A 535
REMARK 465 GLY A 536
REMARK 465 GLY A 537
REMARK 465 HIS A 538
REMARK 465 HIS A 539
REMARK 465 HIS A 540
REMARK 465 HIS A 541
REMARK 465 HIS A 542
REMARK 465 HIS A 543
REMARK 465 GLY A 544
REMARK 465 GLU A 545
REMARK 465 ASN A 546
REMARK 465 LEU A 547
REMARK 465 TYR A 548
REMARK 465 PHE A 549
REMARK 465 GLN A 550
REMARK 465 GLY A 551
REMARK 465 ILE A 552
REMARK 465 SER A 553
REMARK 465 SER A 554
REMARK 465 GLU A 555
REMARK 465 THR A 612
REMARK 465 THR A 613
REMARK 465 THR A 614
REMARK 465 GLU A 650
REMARK 465 ALA A 651
REMARK 465 LYS A 808
REMARK 465 LEU A 809
REMARK 465 GLY A 810
REMARK 465 GLY A 811
REMARK 465 VAL A 812
REMARK 465 LEU A 813
REMARK 465 SER A 814
REMARK 465 GLY A 815
REMARK 465 ASN A 816
REMARK 465 ASN A 817
REMARK 465 LYS A 818
REMARK 465 LYS A 819
REMARK 465 GLN A 820
REMARK 465 LEU A 821
REMARK 465 GLN A 822
REMARK 465 GLN A 823
REMARK 465 GLY A 824
REMARK 465 THR A 825
REMARK 465 MET A 826
REMARK 465 VAL A 827
REMARK 465 MET A 828
REMARK 465 PRO A 829
REMARK 465 ASP A 830
REMARK 465 ILE A 831
REMARK 465 LEU A 832
REMARK 465 PRO A 833
REMARK 465 GLU A 834
REMARK 465 LEU A 835
REMARK 465 MET A 836
REMARK 465 PRO A 837
REMARK 465 SER A 838
REMARK 465 ASP A 839
REMARK 465 ASN A 840
REMARK 465 THR A 841
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 O HOH A 109 O HOH A 125 2.13
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 LEU A 610 86.15 77.92
REMARK 500 LEU A 616 121.54 73.43
REMARK 500 ASN A 638 125.03 -36.33
REMARK 500 SER A 702 63.88 -65.09
REMARK 500 SER A 703 -119.63 -154.28
REMARK 500 TYR A 727 43.15 -147.96
REMARK 500 VAL A 755 -161.06 -128.21
REMARK 500 ASP A 761 -120.50 49.66
REMARK 500
REMARK 500 REMARK: NULL
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MG A 902 MG
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 HOH A 38 O
REMARK 620 2 HOH A 100 O 93.7
REMARK 620 3 HOH A 117 O 152.3 65.0
REMARK 620 4 ASP A 766 OD1 76.0 85.8 84.6
REMARK 620 5 PRO A 767 O 78.9 169.3 119.3 85.0
REMARK 620 6 GLN A 768 OE1 97.6 93.9 101.2 173.5 94.6
REMARK 620 N 1 2 3 4 5
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MG A 903 MG
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 HOH A 50 O
REMARK 620 2 HOH A 82 O 142.1
REMARK 620 3 HOH A 273 O 73.0 69.6
REMARK 620 4 GLY A 776 O 126.8 85.4 148.7
REMARK 620 5 GLY A 778 O 77.3 88.5 77.1 84.0
REMARK 620 N 1 2 3 4
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MG A 901 MG
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 HOH A 115 O
REMARK 620 2 GLN A 758 OE1 116.6
REMARK 620 3 AMP A 907 O1P 108.0 116.3
REMARK 620 4 AMP A 907 O3' 94.8 117.7 100.4
REMARK 620 N 1 2 3
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 ZN A 904 ZN
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 HIS A 742 ND1
REMARK 620 2 HIS A 794 NE2 100.3
REMARK 620 3 CYS A 796 SG 101.4 109.0
REMARK 620 4 CYS A 800 SG 118.4 109.1 117.1
REMARK 620 N 1 2 3
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 901
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 902
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 903
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 904
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 905
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 906
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AMP A 907
DBREF 3LKM A 552 841 UNP P42527 MHCKA_DICDI 552 841
SEQADV 3LKM MET A 535 UNP P42527 EXPRESSION TAG
SEQADV 3LKM GLY A 536 UNP P42527 EXPRESSION TAG
SEQADV 3LKM GLY A 537 UNP P42527 EXPRESSION TAG
SEQADV 3LKM HIS A 538 UNP P42527 EXPRESSION TAG
SEQADV 3LKM HIS A 539 UNP P42527 EXPRESSION TAG
SEQADV 3LKM HIS A 540 UNP P42527 EXPRESSION TAG
SEQADV 3LKM HIS A 541 UNP P42527 EXPRESSION TAG
SEQADV 3LKM HIS A 542 UNP P42527 EXPRESSION TAG
SEQADV 3LKM HIS A 543 UNP P42527 EXPRESSION TAG
SEQADV 3LKM GLY A 544 UNP P42527 EXPRESSION TAG
SEQADV 3LKM GLU A 545 UNP P42527 EXPRESSION TAG
SEQADV 3LKM ASN A 546 UNP P42527 EXPRESSION TAG
SEQADV 3LKM LEU A 547 UNP P42527 EXPRESSION TAG
SEQADV 3LKM TYR A 548 UNP P42527 EXPRESSION TAG
SEQADV 3LKM PHE A 549 UNP P42527 EXPRESSION TAG
SEQADV 3LKM GLN A 550 UNP P42527 EXPRESSION TAG
SEQADV 3LKM GLY A 551 UNP P42527 EXPRESSION TAG
SEQRES 1 A 307 MET GLY GLY HIS HIS HIS HIS HIS HIS GLY GLU ASN LEU
SEQRES 2 A 307 TYR PHE GLN GLY ILE SER SER GLU THR GLY GLU MET GLY
SEQRES 3 A 307 ILE LEU TRP GLU PHE ASP PRO ILE ILE ASN LYS TRP ILE
SEQRES 4 A 307 ARG LEU SER MET LYS LEU LYS VAL GLU ARG LYS PRO PHE
SEQRES 5 A 307 ALA GLU GLY ALA LEU ARG GLU ALA TYR HIS THR VAL SER
SEQRES 6 A 307 LEU GLY VAL GLY THR ASP GLU ASN TYR PRO LEU GLY THR
SEQRES 7 A 307 THR THR LYS LEU PHE PRO PRO ILE GLU MET ILE SER PRO
SEQRES 8 A 307 ILE SER LYS ASN ASN GLU ALA MET THR GLN LEU LYS ASN
SEQRES 9 A 307 GLY THR LYS PHE VAL LEU LYS LEU TYR LYS LYS GLU ALA
SEQRES 10 A 307 GLU GLN GLN ALA SER ARG GLU LEU TYR PHE GLU ASP VAL
SEQRES 11 A 307 LYS MET GLN MET VAL CYS ARG ASP TRP GLY ASN LYS PHE
SEQRES 12 A 307 ASN GLN LYS LYS PRO PRO LYS LYS ILE GLU PHE LEU MET
SEQRES 13 A 307 SER TRP VAL VAL GLU LEU ILE ASP ARG SER PRO SER SER
SEQRES 14 A 307 ASN GLY GLN PRO ILE LEU CYS SER ILE GLU PRO LEU LEU
SEQRES 15 A 307 VAL GLY GLU PHE LYS LYS ASN ASN SER ASN TYR GLY ALA
SEQRES 16 A 307 VAL LEU THR ASN ARG SER THR PRO GLN ALA PHE SER HIS
SEQRES 17 A 307 PHE THR TYR GLU LEU SER ASN LYS GLN MET ILE VAL VAL
SEQRES 18 A 307 ASP ILE GLN GLY VAL ASP ASP LEU TYR THR ASP PRO GLN
SEQRES 19 A 307 ILE HIS THR PRO ASP GLY LYS GLY PHE GLY LEU GLY ASN
SEQRES 20 A 307 LEU GLY LYS ALA GLY ILE ASN LYS PHE ILE THR THR HIS
SEQRES 21 A 307 LYS CYS ASN ALA VAL CYS ALA LEU LEU ASP LEU ASP VAL
SEQRES 22 A 307 LYS LEU GLY GLY VAL LEU SER GLY ASN ASN LYS LYS GLN
SEQRES 23 A 307 LEU GLN GLN GLY THR MET VAL MET PRO ASP ILE LEU PRO
SEQRES 24 A 307 GLU LEU MET PRO SER ASP ASN THR
HET MG A 901 1
HET MG A 902 1
HET MG A 903 1
HET ZN A 904 1
HET PO4 A 905 5
HET PO4 A 906 5
HET AMP A 907 23
HETNAM MG MAGNESIUM ION
HETNAM ZN ZINC ION
HETNAM PO4 PHOSPHATE ION
HETNAM AMP ADENOSINE MONOPHOSPHATE
FORMUL 2 MG 3(MG 2+)
FORMUL 5 ZN ZN 2+
FORMUL 6 PO4 2(O4 P 3-)
FORMUL 8 AMP C10 H14 N5 O7 P
FORMUL 9 HOH *305(H2 O)
HELIX 1 1 PRO A 619 ILE A 623 5 5
HELIX 2 2 GLU A 631 LEU A 636 1 6
HELIX 3 3 SER A 656 LYS A 680 1 25
HELIX 4 4 ARG A 734 SER A 748 1 15
HELIX 5 5 LEU A 782 HIS A 794 1 13
HELIX 6 6 ASN A 797 LEU A 803 1 7
SHEET 1 A 8 ALA A 587 GLU A 588 0
SHEET 2 A 8 ARG A 592 THR A 604 -1 O ALA A 594 N ALA A 587
SHEET 3 A 8 LYS A 641 TYR A 647 -1 O LEU A 644 N TYR A 595
SHEET 4 A 8 LEU A 709 PRO A 714 -1 O SER A 711 N LYS A 645
SHEET 5 A 8 TRP A 692 GLU A 695 -1 N VAL A 694 O CYS A 710
SHEET 6 A 8 GLU A 558 ASP A 566 -1 N TRP A 563 O VAL A 693
SHEET 7 A 8 LYS A 571 VAL A 581 -1 O LEU A 575 N LEU A 562
SHEET 8 A 8 ARG A 592 THR A 604 -1 O LEU A 600 N LYS A 578
SHEET 1 B 4 GLU A 687 PHE A 688 0
SHEET 2 B 4 LEU A 763 TYR A 764 1 O TYR A 764 N GLU A 687
SHEET 3 B 4 GLN A 758 VAL A 760 -1 N VAL A 760 O LEU A 763
SHEET 4 B 4 PHE A 720 LYS A 722 -1 N LYS A 721 O GLY A 759
SHEET 1 C 2 ILE A 753 VAL A 755 0
SHEET 2 C 2 GLN A 768 HIS A 770 -1 O GLN A 768 N VAL A 755
LINK O HOH A 38 MG MG A 902 1555 1555 2.77
LINK O HOH A 50 MG MG A 903 1555 1555 2.79
LINK O HOH A 82 MG MG A 903 1555 1555 2.77
LINK O HOH A 100 MG MG A 902 1555 1555 2.69
LINK O HOH A 115 MG MG A 901 1555 1555 2.68
LINK O HOH A 117 MG MG A 902 1555 1555 2.88
LINK O HOH A 273 MG MG A 903 1555 1555 2.93
LINK ND1 HIS A 742 ZN ZN A 904 1555 1555 2.14
LINK OE1 GLN A 758 MG MG A 901 1555 1555 2.68
LINK OD1 ASP A 766 MG MG A 902 1555 1555 2.62
LINK O PRO A 767 MG MG A 902 1555 1555 2.80
LINK OE1 GLN A 768 MG MG A 902 1555 1555 2.83
LINK O GLY A 776 MG MG A 903 1555 1555 2.80
LINK O GLY A 778 MG MG A 903 1555 1555 2.73
LINK NE2 HIS A 794 ZN ZN A 904 1555 1555 2.13
LINK SG CYS A 796 ZN ZN A 904 1555 1555 2.31
LINK SG CYS A 800 ZN ZN A 904 1555 1555 2.30
LINK MG MG A 901 O1P AMP A 907 1555 1555 2.66
LINK MG MG A 901 O3' AMP A 907 1555 1555 2.72
CISPEP 1 PHE A 617 PRO A 618 0 1.78
SITE 1 AC1 3 HOH A 115 GLN A 758 AMP A 907
SITE 1 AC2 7 HOH A 38 HOH A 100 HOH A 117 MET A 666
SITE 2 AC2 7 ASP A 766 PRO A 767 GLN A 768
SITE 1 AC3 6 HOH A 50 HOH A 82 HOH A 273 GLY A 774
SITE 2 AC3 6 GLY A 776 GLY A 778
SITE 1 AC4 4 HIS A 742 HIS A 794 CYS A 796 CYS A 800
SITE 1 AC5 7 HOH A 216 HOH A 223 HOH A 233 LYS A 684
SITE 2 AC5 7 ARG A 734 SER A 735 THR A 736
SITE 1 AC6 10 HOH A 79 HOH A 86 HOH A 100 HOH A 130
SITE 2 AC6 10 GLY A 589 ALA A 590 LEU A 591 ARG A 592
SITE 3 AC6 10 ASP A 766 AMP A 907
SITE 1 AC7 18 HOH A 11 HOH A 133 HOH A 252 PHE A 586
SITE 2 AC7 18 ALA A 587 GLU A 588 GLY A 589 ARG A 592
SITE 3 AC7 18 LYS A 645 LEU A 689 GLU A 713 PRO A 714
SITE 4 AC7 18 LEU A 716 PHE A 720 THR A 765 ASP A 766
SITE 5 AC7 18 MG A 901 PO4 A 906
CRYST1 76.224 83.777 44.364 90.00 90.00 90.00 P 21 21 2 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.013119 0.000000 0.000000 0.00000
SCALE2 0.000000 0.011936 0.000000 0.00000
SCALE3 0.000000 0.000000 0.022541 0.00000