HEADER METAL BINDING PROTEIN 05-FEB-10 3LPQ TITLE HUMAN MITONEET WITH 2FE-2S COORDINATING LIGAND HIS 87 REPLACED WITH TITLE 2 CYS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CDGSH IRON SULFUR DOMAIN-CONTAINING PROTEIN 1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MITONEET; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 STRAIN: BL21(DE3); SOURCE 6 GENE: C10ORF70, CISD1, MDS029, ZCD1; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21-CODON PLUS RIL(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET28A(+) KEYWDS CDGSH PROTEIN FOLD, 2FE-2S CLUSTER, NEET FOLD, HOMODIMER, IRON, IRON- KEYWDS 2 SULFUR, MEMBRANE, METAL-BINDING, MITOCHONDRION, MITOCHONDRION OUTER KEYWDS 3 MEMBRANE, SIGNAL-ANCHOR, TRANSMEMBRANE, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.R.CONLAN,C.HOMER,H.L.AXELROD,A.E.COHEN,E.C.ABRESCH,J.ZURIS, AUTHOR 2 R.NECHUSHTAI,M.L.PADDOCK,P.A.JENNINGS REVDAT 3 21-FEB-24 3LPQ 1 REMARK SEQADV LINK REVDAT 2 28-MAR-12 3LPQ 1 JRNL VERSN REVDAT 1 01-JUN-11 3LPQ 0 JRNL AUTH A.R.CONLAN,M.L.PADDOCK,C.HOMER,H.L.AXELROD,A.E.COHEN, JRNL AUTH 2 E.C.ABRESCH,J.A.ZURIS,R.NECHUSHTAI,P.A.JENNINGS JRNL TITL MUTATION OF THE HIS LIGAND IN MITONEET STABILIZES THE 2FE-2S JRNL TITL 2 CLUSTER DESPITE CONFORMATIONAL HETEROGENEITY IN THE LIGAND JRNL TITL 3 ENVIRONMENT. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 67 516 2011 JRNL REFN ISSN 0907-4449 JRNL PMID 21636891 JRNL DOI 10.1107/S0907444911011577 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.89 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 16487 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 835 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1119 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.41 REMARK 3 BIN R VALUE (WORKING SET) : 0.2480 REMARK 3 BIN FREE R VALUE SET COUNT : 66 REMARK 3 BIN FREE R VALUE : 0.2890 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1171 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 101 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.81000 REMARK 3 B22 (A**2) : -0.49000 REMARK 3 B33 (A**2) : -2.32000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.112 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.115 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.078 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.045 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1282 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 889 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1733 ; 1.722 ; 1.944 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2178 ; 0.880 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 168 ; 3.272 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 62 ;22.915 ;24.516 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 231 ; 8.568 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ; 6.890 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 181 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1441 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 256 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 787 ; 1.364 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 315 ; 0.490 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1264 ; 2.149 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 495 ; 3.524 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 456 ; 5.093 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 33 A 39 REMARK 3 ORIGIN FOR THE GROUP (A): -9.8185 58.7347 -11.2104 REMARK 3 T TENSOR REMARK 3 T11: 0.7225 T22: 0.3354 REMARK 3 T33: 0.3277 T12: 0.2793 REMARK 3 T13: -0.1100 T23: -0.0806 REMARK 3 L TENSOR REMARK 3 L11: 2.8318 L22: 9.9491 REMARK 3 L33: 17.0357 L12: -0.1960 REMARK 3 L13: 2.1295 L23: -12.5259 REMARK 3 S TENSOR REMARK 3 S11: 0.4506 S12: 0.6263 S13: -0.6738 REMARK 3 S21: -0.1442 S22: 0.2691 S23: 0.2435 REMARK 3 S31: 0.4884 S32: 0.1446 S33: -0.7197 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 40 A 107 REMARK 3 ORIGIN FOR THE GROUP (A): 11.3754 45.3637 7.8139 REMARK 3 T TENSOR REMARK 3 T11: 0.1056 T22: 0.0693 REMARK 3 T33: 0.1176 T12: 0.0221 REMARK 3 T13: 0.0002 T23: 0.0149 REMARK 3 L TENSOR REMARK 3 L11: 1.4572 L22: 1.7113 REMARK 3 L33: 3.3488 L12: 0.3664 REMARK 3 L13: -0.4990 L23: 0.1691 REMARK 3 S TENSOR REMARK 3 S11: -0.0417 S12: 0.0508 S13: -0.0542 REMARK 3 S21: -0.0729 S22: -0.0146 S23: -0.0715 REMARK 3 S31: 0.1710 S32: 0.0718 S33: 0.0563 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 34 B 41 REMARK 3 ORIGIN FOR THE GROUP (A): -17.5042 39.3350 17.2787 REMARK 3 T TENSOR REMARK 3 T11: 0.9109 T22: 0.5968 REMARK 3 T33: 0.7373 T12: 0.1496 REMARK 3 T13: 0.0479 T23: -0.1691 REMARK 3 L TENSOR REMARK 3 L11: 11.5295 L22: 3.3385 REMARK 3 L33: 1.4916 L12: 4.9204 REMARK 3 L13: 4.0536 L23: 2.0165 REMARK 3 S TENSOR REMARK 3 S11: -0.4724 S12: 1.4372 S13: 0.2936 REMARK 3 S21: 0.0756 S22: 0.1774 S23: 0.9726 REMARK 3 S31: -0.0944 S32: 0.4041 S33: 0.2950 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 42 B 107 REMARK 3 ORIGIN FOR THE GROUP (A): 11.3085 54.6383 5.3549 REMARK 3 T TENSOR REMARK 3 T11: 0.1014 T22: 0.0765 REMARK 3 T33: 0.1244 T12: 0.0013 REMARK 3 T13: 0.0054 T23: 0.0150 REMARK 3 L TENSOR REMARK 3 L11: 0.8781 L22: 1.5082 REMARK 3 L33: 3.4039 L12: -0.4406 REMARK 3 L13: -0.7131 L23: 0.3435 REMARK 3 S TENSOR REMARK 3 S11: 0.0209 S12: 0.0051 S13: 0.1128 REMARK 3 S21: 0.0083 S22: -0.0195 S23: -0.1034 REMARK 3 S31: -0.1606 S32: 0.0937 S33: -0.0014 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 3. TLS GROUPS WERE ASSIGNED WITH THE AID OF THE REMARK 3 TLS MOTION DETERMINATION SERVER. REMARK 4 REMARK 4 3LPQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-FEB-10. REMARK 100 THE DEPOSITION ID IS D_1000057576. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-NOV-07; 15-NOV-07 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SSRL; SSRL REMARK 200 BEAMLINE : BL7-1; BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795; 0.9795 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R; MARMOSAIC 325 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.5 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16489 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 38.019 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : 0.06200 REMARK 200 FOR THE DATA SET : 16.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 0.72600 REMARK 200 R SYM FOR SHELL (I) : 0.72600 REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 17% PEG 3000, 100 MM TRIS-HCL PH 8.0, REMARK 280 150 MM NACL, VAPOR DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.65550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 29.61100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.79350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 29.61100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.65550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 24.79350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 HIS B -1 REMARK 465 MET B 0 REMARK 465 ARG B 33 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 42 CG CD CE NZ REMARK 470 LYS A 89 CE NZ REMARK 470 LYS A 106 NZ REMARK 470 GLU A 107 CG CD OE1 OE2 REMARK 470 PHE B 34 CG CD1 CD2 CE1 CE2 CZ REMARK 470 VAL B 36 CG1 CG2 REMARK 470 LYS B 37 CG CD CE NZ REMARK 470 ASP B 38 CB CG OD1 OD2 REMARK 470 HIS B 39 CG ND1 CD2 CE1 NE2 REMARK 470 ARG B 40 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 42 CG CD CE NZ REMARK 470 LYS B 68 CE NZ REMARK 470 GLU B 107 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS B 87 CB CYS B 87 SG 0.107 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 50 60.70 34.15 REMARK 500 LYS A 55 107.04 -162.62 REMARK 500 LYS A 55 105.11 -161.47 REMARK 500 HIS B 39 -155.59 -165.10 REMARK 500 LYS B 42 62.74 64.93 REMARK 500 HIS B 48 -10.18 -144.20 REMARK 500 GLN B 50 59.03 32.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A 500 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 72 SG REMARK 620 2 FES A 500 S1 110.7 REMARK 620 3 FES A 500 S2 115.6 105.8 REMARK 620 4 CYS A 74 SG 100.0 109.5 115.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A 500 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 83 SG REMARK 620 2 FES A 500 S1 107.2 REMARK 620 3 FES A 500 S2 124.5 103.7 REMARK 620 4 CYS A 87 SG 100.9 111.4 109.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES B 500 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 72 SG REMARK 620 2 FES B 500 S1 111.2 REMARK 620 3 FES B 500 S2 115.6 105.9 REMARK 620 4 CYS B 74 SG 101.5 109.4 113.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES B 500 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 83 SG REMARK 620 2 FES B 500 S1 107.7 REMARK 620 3 FES B 500 S2 125.0 103.0 REMARK 620 4 CYS B 87 SG 104.2 109.2 107.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FES A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FES B 500 DBREF 3LPQ A 33 107 UNP Q9NZ45 CISD1_HUMAN 33 107 DBREF 3LPQ B 33 107 UNP Q9NZ45 CISD1_HUMAN 33 107 SEQADV 3LPQ GLY A -3 UNP Q9NZ45 EXPRESSION TAG SEQADV 3LPQ SER A -2 UNP Q9NZ45 EXPRESSION TAG SEQADV 3LPQ HIS A -1 UNP Q9NZ45 EXPRESSION TAG SEQADV 3LPQ MET A 0 UNP Q9NZ45 EXPRESSION TAG SEQADV 3LPQ CYS A 87 UNP Q9NZ45 HIS 87 ENGINEERED MUTATION SEQADV 3LPQ GLY B -3 UNP Q9NZ45 EXPRESSION TAG SEQADV 3LPQ SER B -2 UNP Q9NZ45 EXPRESSION TAG SEQADV 3LPQ HIS B -1 UNP Q9NZ45 EXPRESSION TAG SEQADV 3LPQ MET B 0 UNP Q9NZ45 EXPRESSION TAG SEQADV 3LPQ CYS B 87 UNP Q9NZ45 HIS 87 ENGINEERED MUTATION SEQRES 1 A 79 GLY SER HIS MET ARG PHE TYR VAL LYS ASP HIS ARG ASN SEQRES 2 A 79 LYS ALA MET ILE ASN LEU HIS ILE GLN LYS ASP ASN PRO SEQRES 3 A 79 LYS ILE VAL HIS ALA PHE ASP MET GLU ASP LEU GLY ASP SEQRES 4 A 79 LYS ALA VAL TYR CYS ARG CYS TRP ARG SER LYS LYS PHE SEQRES 5 A 79 PRO PHE CYS ASP GLY ALA CYS THR LYS HIS ASN GLU GLU SEQRES 6 A 79 THR GLY ASP ASN VAL GLY PRO LEU ILE ILE LYS LYS LYS SEQRES 7 A 79 GLU SEQRES 1 B 79 GLY SER HIS MET ARG PHE TYR VAL LYS ASP HIS ARG ASN SEQRES 2 B 79 LYS ALA MET ILE ASN LEU HIS ILE GLN LYS ASP ASN PRO SEQRES 3 B 79 LYS ILE VAL HIS ALA PHE ASP MET GLU ASP LEU GLY ASP SEQRES 4 B 79 LYS ALA VAL TYR CYS ARG CYS TRP ARG SER LYS LYS PHE SEQRES 5 B 79 PRO PHE CYS ASP GLY ALA CYS THR LYS HIS ASN GLU GLU SEQRES 6 B 79 THR GLY ASP ASN VAL GLY PRO LEU ILE ILE LYS LYS LYS SEQRES 7 B 79 GLU HET FES A 500 4 HET FES B 500 4 HETNAM FES FE2/S2 (INORGANIC) CLUSTER FORMUL 3 FES 2(FE2 S2) FORMUL 5 HOH *101(H2 O) HELIX 1 1 GLU A 63 LEU A 65 5 3 HELIX 2 2 GLY A 85 GLY A 95 1 11 HELIX 3 3 GLU B 63 LEU B 65 5 3 HELIX 4 4 ALA B 86 GLY B 95 1 10 SHEET 1 A 3 HIS A 58 ASP A 61 0 SHEET 2 A 3 LEU B 101 LYS B 104 1 O ILE B 102 N HIS A 58 SHEET 3 A 3 LYS B 68 TYR B 71 -1 N TYR B 71 O LEU B 101 SHEET 1 B 3 LYS A 68 TYR A 71 0 SHEET 2 B 3 VAL A 98 LYS A 104 -1 O LEU A 101 N TYR A 71 SHEET 3 B 3 ILE B 56 ASP B 61 1 O HIS B 58 N ILE A 102 LINK SG CYS A 72 FE1 FES A 500 1555 1555 2.36 LINK SG CYS A 74 FE1 FES A 500 1555 1555 2.19 LINK SG CYS A 83 FE2 FES A 500 1555 1555 2.31 LINK SG BCYS A 87 FE2 FES A 500 1555 1555 2.39 LINK SG CYS B 72 FE1 FES B 500 1555 1555 2.34 LINK SG CYS B 74 FE1 FES B 500 1555 1555 2.17 LINK SG CYS B 83 FE2 FES B 500 1555 1555 2.33 LINK SG ACYS B 87 FE2 FES B 500 1555 1555 2.33 CISPEP 1 PHE A 80 PRO A 81 0 9.64 CISPEP 2 PHE B 80 PRO B 81 0 9.38 SITE 1 AC1 7 CYS A 72 ARG A 73 CYS A 74 CYS A 83 SITE 2 AC1 7 ASP A 84 ALA A 86 CYS A 87 SITE 1 AC2 7 CYS B 72 ARG B 73 CYS B 74 CYS B 83 SITE 2 AC2 7 ASP B 84 ALA B 86 CYS B 87 CRYST1 49.311 49.587 59.222 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020279 0.000000 0.000000 0.00000 SCALE2 0.000000 0.020167 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016886 0.00000