data_3LSR # _entry.id 3LSR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3LSR pdb_00003lsr 10.2210/pdb3lsr/pdb NDB NA0474 ? ? RCSB RCSB057683 ? ? WWPDB D_1000057683 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3LSP 'psedopalindrome DNA bound to DesT' unspecified PDB 3LSJ 'Same protein without DNA' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3LSR _pdbx_database_status.recvd_initial_deposition_date 2010-02-12 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Miller, D.J.' 1 'White, S.W.' 2 # _citation.id primary _citation.title 'Structural basis for the transcriptional regulation of membrane lipid homeostasis.' _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_volume 17 _citation.page_first 971 _citation.page_last 975 _citation.year 2010 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1545-9993 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20639888 _citation.pdbx_database_id_DOI 10.1038/nsmb.1847 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Miller, D.J.' 1 ? primary 'Zhang, Y.M.' 2 ? primary 'Subramanian, C.' 3 ? primary 'Rock, C.O.' 4 ? primary 'White, S.W.' 5 ? # _cell.entry_id 3LSR _cell.length_a 79.358 _cell.length_b 79.358 _cell.length_c 145.458 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3LSR _symmetry.space_group_name_H-M 'I 41' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 80 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man DesT 24000.699 1 ? ? ? ? 2 polymer syn 'DNA (27-MER)' 10145.531 1 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 4 water nat water 18.015 15 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MASPRAEQKQQTRHALMSAARHLMESGRGFGSLSLREVTRAAGIVPAGFYRHFSDMDQLGLALVAEVDETFRATLRAVRR NEFELGGLIDASVRIFLDAVGANRSQFLFLAREQYGGSLPIRQAIASLRQRITDDLAADLALLNKMPHLDGAALDVFADL VVKTVFATLPELIDPPAADLPPHLMPAAKITHQLRFIMIGGKHWHGLPGSSVDKLAAALE ; ;MASPRAEQKQQTRHALMSAARHLMESGRGFGSLSLREVTRAAGIVPAGFYRHFSDMDQLGLALVAEVDETFRATLRAVRR NEFELGGLIDASVRIFLDAVGANRSQFLFLAREQYGGSLPIRQAIASLRQRITDDLAADLALLNKMPHLDGAALDVFADL VVKTVFATLPELIDPPAADLPPHLMPAAKITHQLRFIMIGGKHWHGLPGSSVDKLAAALE ; A ? 2 polydeoxyribonucleotide no no ;(DT)(DG)(DT)(DA)(DC)(DA)(DT)(DC)(DA)(DG)(DT)(DG)(DA)(DA)(DC)(DG)(DC)(DG)(DC)(DG) (DT)(DT)(DC)(DA)(DC)(DT)(DG)(DA)(DT)(DG)(DT)(DA)(DC) ; TGTACATCAGTGAACGCGCGTTCACTGATGTAC B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 SER n 1 4 PRO n 1 5 ARG n 1 6 ALA n 1 7 GLU n 1 8 GLN n 1 9 LYS n 1 10 GLN n 1 11 GLN n 1 12 THR n 1 13 ARG n 1 14 HIS n 1 15 ALA n 1 16 LEU n 1 17 MET n 1 18 SER n 1 19 ALA n 1 20 ALA n 1 21 ARG n 1 22 HIS n 1 23 LEU n 1 24 MET n 1 25 GLU n 1 26 SER n 1 27 GLY n 1 28 ARG n 1 29 GLY n 1 30 PHE n 1 31 GLY n 1 32 SER n 1 33 LEU n 1 34 SER n 1 35 LEU n 1 36 ARG n 1 37 GLU n 1 38 VAL n 1 39 THR n 1 40 ARG n 1 41 ALA n 1 42 ALA n 1 43 GLY n 1 44 ILE n 1 45 VAL n 1 46 PRO n 1 47 ALA n 1 48 GLY n 1 49 PHE n 1 50 TYR n 1 51 ARG n 1 52 HIS n 1 53 PHE n 1 54 SER n 1 55 ASP n 1 56 MET n 1 57 ASP n 1 58 GLN n 1 59 LEU n 1 60 GLY n 1 61 LEU n 1 62 ALA n 1 63 LEU n 1 64 VAL n 1 65 ALA n 1 66 GLU n 1 67 VAL n 1 68 ASP n 1 69 GLU n 1 70 THR n 1 71 PHE n 1 72 ARG n 1 73 ALA n 1 74 THR n 1 75 LEU n 1 76 ARG n 1 77 ALA n 1 78 VAL n 1 79 ARG n 1 80 ARG n 1 81 ASN n 1 82 GLU n 1 83 PHE n 1 84 GLU n 1 85 LEU n 1 86 GLY n 1 87 GLY n 1 88 LEU n 1 89 ILE n 1 90 ASP n 1 91 ALA n 1 92 SER n 1 93 VAL n 1 94 ARG n 1 95 ILE n 1 96 PHE n 1 97 LEU n 1 98 ASP n 1 99 ALA n 1 100 VAL n 1 101 GLY n 1 102 ALA n 1 103 ASN n 1 104 ARG n 1 105 SER n 1 106 GLN n 1 107 PHE n 1 108 LEU n 1 109 PHE n 1 110 LEU n 1 111 ALA n 1 112 ARG n 1 113 GLU n 1 114 GLN n 1 115 TYR n 1 116 GLY n 1 117 GLY n 1 118 SER n 1 119 LEU n 1 120 PRO n 1 121 ILE n 1 122 ARG n 1 123 GLN n 1 124 ALA n 1 125 ILE n 1 126 ALA n 1 127 SER n 1 128 LEU n 1 129 ARG n 1 130 GLN n 1 131 ARG n 1 132 ILE n 1 133 THR n 1 134 ASP n 1 135 ASP n 1 136 LEU n 1 137 ALA n 1 138 ALA n 1 139 ASP n 1 140 LEU n 1 141 ALA n 1 142 LEU n 1 143 LEU n 1 144 ASN n 1 145 LYS n 1 146 MET n 1 147 PRO n 1 148 HIS n 1 149 LEU n 1 150 ASP n 1 151 GLY n 1 152 ALA n 1 153 ALA n 1 154 LEU n 1 155 ASP n 1 156 VAL n 1 157 PHE n 1 158 ALA n 1 159 ASP n 1 160 LEU n 1 161 VAL n 1 162 VAL n 1 163 LYS n 1 164 THR n 1 165 VAL n 1 166 PHE n 1 167 ALA n 1 168 THR n 1 169 LEU n 1 170 PRO n 1 171 GLU n 1 172 LEU n 1 173 ILE n 1 174 ASP n 1 175 PRO n 1 176 PRO n 1 177 ALA n 1 178 ALA n 1 179 ASP n 1 180 LEU n 1 181 PRO n 1 182 PRO n 1 183 HIS n 1 184 LEU n 1 185 MET n 1 186 PRO n 1 187 ALA n 1 188 ALA n 1 189 LYS n 1 190 ILE n 1 191 THR n 1 192 HIS n 1 193 GLN n 1 194 LEU n 1 195 ARG n 1 196 PHE n 1 197 ILE n 1 198 MET n 1 199 ILE n 1 200 GLY n 1 201 GLY n 1 202 LYS n 1 203 HIS n 1 204 TRP n 1 205 HIS n 1 206 GLY n 1 207 LEU n 1 208 PRO n 1 209 GLY n 1 210 SER n 1 211 SER n 1 212 VAL n 1 213 ASP n 1 214 LYS n 1 215 LEU n 1 216 ALA n 1 217 ALA n 1 218 ALA n 1 219 LEU n 1 220 GLU n 2 1 DT n 2 2 DG n 2 3 DT n 2 4 DA n 2 5 DC n 2 6 DA n 2 7 DT n 2 8 DC n 2 9 DA n 2 10 DG n 2 11 DT n 2 12 DG n 2 13 DA n 2 14 DA n 2 15 DC n 2 16 DG n 2 17 DC n 2 18 DG n 2 19 DC n 2 20 DG n 2 21 DT n 2 22 DT n 2 23 DC n 2 24 DA n 2 25 DC n 2 26 DT n 2 27 DG n 2 28 DA n 2 29 DT n 2 30 DG n 2 31 DT n 2 32 DA n 2 33 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'desT, PA4890' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pseudomonas aeruginosa' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 287 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21DE3 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q9HUS3_PSEAE Q9HUS3 1 ;MSSPRAEQKQQTRHALMSAARHLMESGRGFGSLSLREVTRAAGIVPAGFYRHFSDMDQLGLALVAEVDETFRATLRAVRR NEFELGGLIDASVRIFLDAVGANRSQFLFLAREQYGGSLPIRQAIASLRQRITDDLAADLALLNKMPHLDGAALDVFADL VVKTVFATLPELIDPPAADLPPHLMPAAKITHQLRFIMIGGKHWHGLPG ; 1 ? 2 PDB 3LSR 3LSR 2 TGTACATCAGTGAACGCGCGTTCACTGATGTAC 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3LSR A 1 ? 209 ? Q9HUS3 1 ? 209 ? 1 209 2 2 3LSR B 1 ? 33 ? 3LSR 0 ? 32 ? 0 32 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3LSR ALA A 2 ? UNP Q9HUS3 SER 2 'engineered mutation' 2 1 1 3LSR SER A 210 ? UNP Q9HUS3 ? ? 'expression tag' 210 2 1 3LSR SER A 211 ? UNP Q9HUS3 ? ? 'expression tag' 211 3 1 3LSR VAL A 212 ? UNP Q9HUS3 ? ? 'expression tag' 212 4 1 3LSR ASP A 213 ? UNP Q9HUS3 ? ? 'expression tag' 213 5 1 3LSR LYS A 214 ? UNP Q9HUS3 ? ? 'expression tag' 214 6 1 3LSR LEU A 215 ? UNP Q9HUS3 ? ? 'expression tag' 215 7 1 3LSR ALA A 216 ? UNP Q9HUS3 ? ? 'expression tag' 216 8 1 3LSR ALA A 217 ? UNP Q9HUS3 ? ? 'expression tag' 217 9 1 3LSR ALA A 218 ? UNP Q9HUS3 ? ? 'expression tag' 218 10 1 3LSR LEU A 219 ? UNP Q9HUS3 ? ? 'expression tag' 219 11 1 3LSR GLU A 220 ? UNP Q9HUS3 ? ? 'expression tag' 220 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3LSR _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.35 _exptl_crystal.density_percent_sol 63.30 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'grown under mineral oil' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pdbx_details ;ML- 0.1M Mes pH7.0, 9% PEG 20K. Protein sample- 0.3 mM protein, 0.3 mM oligo, 0.3 mM 18:1delta9-CoA. Drop- 2ul ML + 2 ul protein + 0.5 uL 1M ammonium sulfate., grown under mineral oil, temperature 291K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2008-10-11 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-BM' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-BM _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 3LSR _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.50 _reflns.number_obs 14862 _reflns.number_all 15465 _reflns.percent_possible_obs 96.1 _reflns.pdbx_Rmerge_I_obs 0.049 _reflns.pdbx_Rsym_value 0.049 _reflns.pdbx_netI_over_sigmaI 40.4 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 3LSR _refine.ls_number_reflns_obs 13546 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 41.38 _refine.ls_d_res_high 2.55 _refine.ls_percent_reflns_obs 97.36 _refine.ls_R_factor_obs 0.22926 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.22750 _refine.ls_R_factor_R_free 0.26477 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 709 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.926 _refine.correlation_coeff_Fo_to_Fc_free 0.901 _refine.B_iso_mean 61.408 _refine.aniso_B[1][1] 0.02 _refine.aniso_B[2][2] 0.02 _refine.aniso_B[3][3] -0.03 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB Entry 3LSP' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.367 _refine.pdbx_overall_ESU_R_Free 0.269 _refine.overall_SU_ML 0.218 _refine.overall_SU_B 10.223 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1470 _refine_hist.pdbx_number_atoms_nucleic_acid 548 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 15 _refine_hist.number_atoms_total 2043 _refine_hist.d_res_high 2.55 _refine_hist.d_res_low 41.38 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.010 0.021 ? 2118 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.423 2.288 ? 2977 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.268 5.000 ? 190 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 33.952 21.765 ? 68 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.644 15.000 ? 246 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 20.940 15.000 ? 18 'X-RAY DIFFRACTION' ? r_chiral_restr 0.081 0.200 ? 337 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 1410 'X-RAY DIFFRACTION' ? r_nbd_refined 0.221 0.200 ? 816 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.304 0.200 ? 1385 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.128 0.200 ? 45 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.130 0.200 ? 58 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.171 0.200 ? 27 'X-RAY DIFFRACTION' ? r_mcbond_it 0.769 1.500 ? 978 'X-RAY DIFFRACTION' ? r_mcangle_it 1.385 2.000 ? 1504 'X-RAY DIFFRACTION' ? r_scbond_it 1.304 3.000 ? 1466 'X-RAY DIFFRACTION' ? r_scangle_it 2.246 4.500 ? 1473 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.550 _refine_ls_shell.d_res_low 2.616 _refine_ls_shell.number_reflns_R_work 781 _refine_ls_shell.R_factor_R_work 0.390 _refine_ls_shell.percent_reflns_obs 78.91 _refine_ls_shell.R_factor_R_free 0.352 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 46 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3LSR _struct.title 'Crystal structure of DesT in complex with duplex DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3LSR _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text ;Transcriptional Repressor, DesT-DNA complex, TetR family, DNA-binding, Transcription, Transcription regulation, TRANSCRIPTION-DNA complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 6 ? LEU A 23 ? ALA A 6 LEU A 23 1 ? 18 HELX_P HELX_P2 2 GLY A 29 ? LEU A 33 ? GLY A 29 LEU A 33 5 ? 5 HELX_P HELX_P3 3 SER A 34 ? GLY A 43 ? SER A 34 GLY A 43 1 ? 10 HELX_P HELX_P4 4 VAL A 45 ? HIS A 52 ? VAL A 45 HIS A 52 5 ? 8 HELX_P HELX_P5 5 ASP A 55 ? ASN A 81 ? ASP A 55 ASN A 81 1 ? 27 HELX_P HELX_P6 6 GLY A 87 ? ALA A 102 ? GLY A 87 ALA A 102 1 ? 16 HELX_P HELX_P7 7 ASN A 103 ? GLY A 117 ? ASN A 103 GLY A 117 1 ? 15 HELX_P HELX_P8 8 SER A 118 ? LEU A 143 ? SER A 118 LEU A 143 1 ? 26 HELX_P HELX_P9 9 ASP A 150 ? ASP A 174 ? ASP A 150 ASP A 174 1 ? 25 HELX_P HELX_P10 10 PRO A 186 ? HIS A 203 ? PRO A 186 HIS A 203 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? B DT 7 N3 ? ? ? 1_555 B DA 28 N1 ? ? B DT 6 B DA 27 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DT 7 O4 ? ? ? 1_555 B DA 28 N6 ? ? B DT 6 B DA 27 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DC 8 N3 ? ? ? 1_555 B DG 27 N1 ? ? B DC 7 B DG 26 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DC 8 N4 ? ? ? 1_555 B DG 27 O6 ? ? B DC 7 B DG 26 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DC 8 O2 ? ? ? 1_555 B DG 27 N2 ? ? B DC 7 B DG 26 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DA 9 N1 ? ? ? 1_555 B DT 26 N3 ? ? B DA 8 B DT 25 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DA 9 N6 ? ? ? 1_555 B DT 26 O4 ? ? B DA 8 B DT 25 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 10 N1 ? ? ? 1_555 B DC 25 N3 ? ? B DG 9 B DC 24 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 10 N2 ? ? ? 1_555 B DC 25 O2 ? ? B DG 9 B DC 24 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DG 10 O6 ? ? ? 1_555 B DC 25 N4 ? ? B DG 9 B DC 24 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DT 11 N3 ? ? ? 1_555 B DA 24 N1 ? ? B DT 10 B DA 23 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DT 11 O4 ? ? ? 1_555 B DA 24 N6 ? ? B DT 10 B DA 23 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DG 12 N1 ? ? ? 1_555 B DC 23 N3 ? ? B DG 11 B DC 22 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DG 12 N2 ? ? ? 1_555 B DC 23 O2 ? ? B DG 11 B DC 22 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DG 12 O6 ? ? ? 1_555 B DC 23 N4 ? ? B DG 11 B DC 22 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DA 13 N1 ? ? ? 1_555 B DT 22 N3 ? ? B DA 12 B DT 21 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DA 13 N6 ? ? ? 1_555 B DT 22 O4 ? ? B DA 12 B DT 21 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DA 14 N1 ? ? ? 1_555 B DT 21 N3 ? ? B DA 13 B DT 20 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DA 14 N6 ? ? ? 1_555 B DT 21 O4 ? ? B DA 13 B DT 20 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DC 15 N3 ? ? ? 1_555 B DG 20 N1 ? ? B DC 14 B DG 19 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DC 15 N4 ? ? ? 1_555 B DG 20 O6 ? ? B DC 14 B DG 19 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DC 15 O2 ? ? ? 1_555 B DG 20 N2 ? ? B DC 14 B DG 19 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DG 16 N1 ? ? ? 1_555 B DC 19 N3 ? ? B DG 15 B DC 18 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DG 16 N2 ? ? ? 1_555 B DC 19 O2 ? ? B DG 15 B DC 18 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DG 16 O6 ? ? ? 1_555 B DC 19 N4 ? ? B DG 15 B DC 18 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DC 17 N3 ? ? ? 1_555 B DG 18 N1 ? ? B DC 16 B DG 17 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DC 17 N4 ? ? ? 1_555 B DG 18 O6 ? ? B DC 16 B DG 17 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DC 17 O2 ? ? ? 1_555 B DG 18 N2 ? ? B DC 16 B DG 17 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DG 18 N1 ? ? ? 1_555 B DC 17 N3 ? ? B DG 17 B DC 16 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DG 18 N2 ? ? ? 1_555 B DC 17 O2 ? ? B DG 17 B DC 16 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DG 18 O6 ? ? ? 1_555 B DC 17 N4 ? ? B DG 17 B DC 16 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DC 19 N3 ? ? ? 1_555 B DG 16 N1 ? ? B DC 18 B DG 15 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DC 19 N4 ? ? ? 1_555 B DG 16 O6 ? ? B DC 18 B DG 15 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B DC 19 O2 ? ? ? 1_555 B DG 16 N2 ? ? B DC 18 B DG 15 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B DG 20 N1 ? ? ? 1_555 B DC 15 N3 ? ? B DG 19 B DC 14 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B DG 20 N2 ? ? ? 1_555 B DC 15 O2 ? ? B DG 19 B DC 14 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B DG 20 O6 ? ? ? 1_555 B DC 15 N4 ? ? B DG 19 B DC 14 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B DT 21 N3 ? ? ? 1_555 B DA 14 N1 ? ? B DT 20 B DA 13 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B DT 21 O4 ? ? ? 1_555 B DA 14 N6 ? ? B DT 20 B DA 13 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B DT 22 N3 ? ? ? 1_555 B DA 13 N1 ? ? B DT 21 B DA 12 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B DT 22 O4 ? ? ? 1_555 B DA 13 N6 ? ? B DT 21 B DA 12 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B DC 23 N3 ? ? ? 1_555 B DG 12 N1 ? ? B DC 22 B DG 11 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B DC 23 N4 ? ? ? 1_555 B DG 12 O6 ? ? B DC 22 B DG 11 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? B DC 23 O2 ? ? ? 1_555 B DG 12 N2 ? ? B DC 22 B DG 11 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? B DA 24 N1 ? ? ? 1_555 B DT 11 N3 ? ? B DA 23 B DT 10 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? B DA 24 N6 ? ? ? 1_555 B DT 11 O4 ? ? B DA 23 B DT 10 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? B DC 25 N3 ? ? ? 1_555 B DG 10 N1 ? ? B DC 24 B DG 9 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? B DC 25 N4 ? ? ? 1_555 B DG 10 O6 ? ? B DC 24 B DG 9 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? B DC 25 O2 ? ? ? 1_555 B DG 10 N2 ? ? B DC 24 B DG 9 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? B DT 26 N3 ? ? ? 1_555 B DA 9 N1 ? ? B DT 25 B DA 8 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? B DT 26 O4 ? ? ? 1_555 B DA 9 N6 ? ? B DT 25 B DA 8 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? B DG 27 N1 ? ? ? 1_555 B DC 8 N3 ? ? B DG 26 B DC 7 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? B DG 27 N2 ? ? ? 1_555 B DC 8 O2 ? ? B DG 26 B DC 7 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? B DG 27 O6 ? ? ? 1_555 B DC 8 N4 ? ? B DG 26 B DC 7 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? B DA 28 N1 ? ? ? 1_555 B DT 7 N3 ? ? B DA 27 B DT 6 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? B DA 28 N6 ? ? ? 1_555 B DT 7 O4 ? ? B DA 27 B DT 6 6_465 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 221 ? 6 'BINDING SITE FOR RESIDUE SO4 A 221' AC2 Software A SO4 222 ? 6 'BINDING SITE FOR RESIDUE SO4 A 222' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HIS A 14 ? HIS A 14 . ? 1_555 ? 2 AC1 6 SER A 18 ? SER A 18 . ? 1_555 ? 3 AC1 6 ARG A 21 ? ARG A 21 . ? 1_555 ? 4 AC1 6 HIS A 22 ? HIS A 22 . ? 1_555 ? 5 AC1 6 SER A 105 ? SER A 105 . ? 1_555 ? 6 AC1 6 HOH E . ? HOH A 230 . ? 1_555 ? 7 AC2 6 GLY A 87 ? GLY A 87 . ? 1_555 ? 8 AC2 6 LEU A 88 ? LEU A 88 . ? 1_555 ? 9 AC2 6 ILE A 89 ? ILE A 89 . ? 1_555 ? 10 AC2 6 ARG A 195 ? ARG A 195 . ? 1_555 ? 11 AC2 6 HOH E . ? HOH A 233 . ? 1_555 ? 12 AC2 6 HOH E . ? HOH A 234 . ? 1_555 ? # _database_PDB_matrix.entry_id 3LSR _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3LSR _atom_sites.fract_transf_matrix[1][1] 0.012601 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012601 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006875 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ALA 2 2 ? ? ? A . n A 1 3 SER 3 3 ? ? ? A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 ARG 5 5 5 ARG ARG A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 GLN 8 8 8 GLN GLN A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 GLN 10 10 10 GLN GLN A . n A 1 11 GLN 11 11 11 GLN GLN A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 ARG 13 13 13 ARG ARG A . n A 1 14 HIS 14 14 14 HIS HIS A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 MET 17 17 17 MET MET A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 HIS 22 22 22 HIS HIS A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 MET 24 24 24 MET MET A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 PHE 30 30 30 PHE PHE A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 ARG 36 36 36 ARG ARG A . n A 1 37 GLU 37 37 37 GLU GLU A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 THR 39 39 39 THR THR A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 PRO 46 46 46 PRO PRO A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 TYR 50 50 50 TYR TYR A . n A 1 51 ARG 51 51 51 ARG ARG A . n A 1 52 HIS 52 52 52 HIS HIS A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 MET 56 56 56 MET MET A . n A 1 57 ASP 57 57 57 ASP ASP A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 ALA 62 62 62 ALA ALA A . n A 1 63 LEU 63 63 63 LEU LEU A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 ASP 68 68 68 ASP ASP A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 THR 70 70 70 THR THR A . n A 1 71 PHE 71 71 71 PHE PHE A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 ALA 73 73 73 ALA ALA A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 ARG 76 76 76 ARG ARG A . n A 1 77 ALA 77 77 77 ALA ALA A . n A 1 78 VAL 78 78 78 VAL VAL A . n A 1 79 ARG 79 79 79 ARG ARG A . n A 1 80 ARG 80 80 80 ARG ARG A . n A 1 81 ASN 81 81 81 ASN ASN A . n A 1 82 GLU 82 82 82 GLU GLU A . n A 1 83 PHE 83 83 83 PHE PHE A . n A 1 84 GLU 84 84 84 GLU GLU A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 LEU 88 88 88 LEU LEU A . n A 1 89 ILE 89 89 89 ILE ILE A . n A 1 90 ASP 90 90 90 ASP ASP A . n A 1 91 ALA 91 91 91 ALA ALA A . n A 1 92 SER 92 92 92 SER SER A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 ARG 94 94 94 ARG ARG A . n A 1 95 ILE 95 95 95 ILE ILE A . n A 1 96 PHE 96 96 96 PHE PHE A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 GLY 101 101 101 GLY GLY A . n A 1 102 ALA 102 102 102 ALA ALA A . n A 1 103 ASN 103 103 103 ASN ASN A . n A 1 104 ARG 104 104 104 ARG ARG A . n A 1 105 SER 105 105 105 SER SER A . n A 1 106 GLN 106 106 106 GLN GLN A . n A 1 107 PHE 107 107 107 PHE PHE A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 PHE 109 109 109 PHE PHE A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 GLU 113 113 113 GLU GLU A . n A 1 114 GLN 114 114 114 GLN GLN A . n A 1 115 TYR 115 115 115 TYR TYR A . n A 1 116 GLY 116 116 116 GLY GLY A . n A 1 117 GLY 117 117 117 GLY GLY A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 LEU 119 119 119 LEU LEU A . n A 1 120 PRO 120 120 120 PRO PRO A . n A 1 121 ILE 121 121 121 ILE ILE A . n A 1 122 ARG 122 122 122 ARG ARG A . n A 1 123 GLN 123 123 123 GLN GLN A . n A 1 124 ALA 124 124 124 ALA ALA A . n A 1 125 ILE 125 125 125 ILE ILE A . n A 1 126 ALA 126 126 126 ALA ALA A . n A 1 127 SER 127 127 127 SER SER A . n A 1 128 LEU 128 128 128 LEU LEU A . n A 1 129 ARG 129 129 129 ARG ARG A . n A 1 130 GLN 130 130 130 GLN GLN A . n A 1 131 ARG 131 131 131 ARG ARG A . n A 1 132 ILE 132 132 132 ILE ILE A . n A 1 133 THR 133 133 133 THR THR A . n A 1 134 ASP 134 134 134 ASP ASP A . n A 1 135 ASP 135 135 135 ASP ASP A . n A 1 136 LEU 136 136 136 LEU LEU A . n A 1 137 ALA 137 137 137 ALA ALA A . n A 1 138 ALA 138 138 138 ALA ALA A . n A 1 139 ASP 139 139 139 ASP ASP A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 ALA 141 141 141 ALA ALA A . n A 1 142 LEU 142 142 142 LEU LEU A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 ASN 144 144 144 ASN ASN A . n A 1 145 LYS 145 145 145 LYS LYS A . n A 1 146 MET 146 146 146 MET MET A . n A 1 147 PRO 147 147 147 PRO PRO A . n A 1 148 HIS 148 148 148 HIS HIS A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 ASP 150 150 150 ASP ASP A . n A 1 151 GLY 151 151 151 GLY GLY A . n A 1 152 ALA 152 152 152 ALA ALA A . n A 1 153 ALA 153 153 153 ALA ALA A . n A 1 154 LEU 154 154 154 LEU LEU A . n A 1 155 ASP 155 155 155 ASP ASP A . n A 1 156 VAL 156 156 156 VAL VAL A . n A 1 157 PHE 157 157 157 PHE PHE A . n A 1 158 ALA 158 158 158 ALA ALA A . n A 1 159 ASP 159 159 159 ASP ASP A . n A 1 160 LEU 160 160 160 LEU LEU A . n A 1 161 VAL 161 161 161 VAL VAL A . n A 1 162 VAL 162 162 162 VAL VAL A . n A 1 163 LYS 163 163 163 LYS LYS A . n A 1 164 THR 164 164 164 THR THR A . n A 1 165 VAL 165 165 165 VAL VAL A . n A 1 166 PHE 166 166 166 PHE PHE A . n A 1 167 ALA 167 167 167 ALA ALA A . n A 1 168 THR 168 168 168 THR THR A . n A 1 169 LEU 169 169 169 LEU LEU A . n A 1 170 PRO 170 170 170 PRO PRO A . n A 1 171 GLU 171 171 171 GLU GLU A . n A 1 172 LEU 172 172 172 LEU LEU A . n A 1 173 ILE 173 173 173 ILE ILE A . n A 1 174 ASP 174 174 174 ASP ASP A . n A 1 175 PRO 175 175 175 PRO PRO A . n A 1 176 PRO 176 176 ? ? ? A . n A 1 177 ALA 177 177 ? ? ? A . n A 1 178 ALA 178 178 ? ? ? A . n A 1 179 ASP 179 179 ? ? ? A . n A 1 180 LEU 180 180 ? ? ? A . n A 1 181 PRO 181 181 ? ? ? A . n A 1 182 PRO 182 182 ? ? ? A . n A 1 183 HIS 183 183 ? ? ? A . n A 1 184 LEU 184 184 ? ? ? A . n A 1 185 MET 185 185 ? ? ? A . n A 1 186 PRO 186 186 186 PRO PRO A . n A 1 187 ALA 187 187 187 ALA ALA A . n A 1 188 ALA 188 188 188 ALA ALA A . n A 1 189 LYS 189 189 189 LYS LYS A . n A 1 190 ILE 190 190 190 ILE ILE A . n A 1 191 THR 191 191 191 THR THR A . n A 1 192 HIS 192 192 192 HIS HIS A . n A 1 193 GLN 193 193 193 GLN GLN A . n A 1 194 LEU 194 194 194 LEU LEU A . n A 1 195 ARG 195 195 195 ARG ARG A . n A 1 196 PHE 196 196 196 PHE PHE A . n A 1 197 ILE 197 197 197 ILE ILE A . n A 1 198 MET 198 198 198 MET MET A . n A 1 199 ILE 199 199 199 ILE ILE A . n A 1 200 GLY 200 200 200 GLY GLY A . n A 1 201 GLY 201 201 201 GLY GLY A . n A 1 202 LYS 202 202 202 LYS LYS A . n A 1 203 HIS 203 203 203 HIS HIS A . n A 1 204 TRP 204 204 204 TRP TRP A . n A 1 205 HIS 205 205 205 HIS HIS A . n A 1 206 GLY 206 206 ? ? ? A . n A 1 207 LEU 207 207 ? ? ? A . n A 1 208 PRO 208 208 ? ? ? A . n A 1 209 GLY 209 209 ? ? ? A . n A 1 210 SER 210 210 ? ? ? A . n A 1 211 SER 211 211 ? ? ? A . n A 1 212 VAL 212 212 ? ? ? A . n A 1 213 ASP 213 213 ? ? ? A . n A 1 214 LYS 214 214 ? ? ? A . n A 1 215 LEU 215 215 ? ? ? A . n A 1 216 ALA 216 216 ? ? ? A . n A 1 217 ALA 217 217 ? ? ? A . n A 1 218 ALA 218 218 ? ? ? A . n A 1 219 LEU 219 219 ? ? ? A . n A 1 220 GLU 220 220 ? ? ? A . n B 2 1 DT 1 0 ? ? ? B . n B 2 2 DG 2 1 ? ? ? B . n B 2 3 DT 3 2 ? ? ? B . n B 2 4 DA 4 3 ? ? ? B . n B 2 5 DC 5 4 4 DC DC B . n B 2 6 DA 6 5 5 DA DA B . n B 2 7 DT 7 6 6 DT DT B . n B 2 8 DC 8 7 7 DC DC B . n B 2 9 DA 9 8 8 DA DA B . n B 2 10 DG 10 9 9 DG DG B . n B 2 11 DT 11 10 10 DT DT B . n B 2 12 DG 12 11 11 DG DG B . n B 2 13 DA 13 12 12 DA DA B . n B 2 14 DA 14 13 13 DA DA B . n B 2 15 DC 15 14 14 DC DC B . n B 2 16 DG 16 15 15 DG DG B . n B 2 17 DC 17 16 16 DC DC B . n B 2 18 DG 18 17 17 DG DG B . n B 2 19 DC 19 18 18 DC DC B . n B 2 20 DG 20 19 19 DG DG B . n B 2 21 DT 21 20 20 DT DT B . n B 2 22 DT 22 21 21 DT DT B . n B 2 23 DC 23 22 22 DC DC B . n B 2 24 DA 24 23 23 DA DA B . n B 2 25 DC 25 24 24 DC DC B . n B 2 26 DT 26 25 25 DT DT B . n B 2 27 DG 27 26 26 DG DG B . n B 2 28 DA 28 27 27 DA DA B . n B 2 29 DT 29 28 28 DT DT B . n B 2 30 DG 30 29 29 DG DG B . n B 2 31 DT 31 30 30 DT DT B . n B 2 32 DA 32 31 ? ? ? B . n B 2 33 DC 33 32 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 1 221 221 SO4 SO4 A . D 3 SO4 1 222 222 SO4 SO4 A . E 4 HOH 1 223 223 HOH HOH A . E 4 HOH 2 224 224 HOH HOH A . E 4 HOH 3 225 225 HOH HOH A . E 4 HOH 4 226 226 HOH HOH A . E 4 HOH 5 227 227 HOH HOH A . E 4 HOH 6 228 228 HOH HOH A . E 4 HOH 7 229 229 HOH HOH A . E 4 HOH 8 230 230 HOH HOH A . E 4 HOH 9 231 231 HOH HOH A . E 4 HOH 10 232 232 HOH HOH A . E 4 HOH 11 233 233 HOH HOH A . E 4 HOH 12 234 234 HOH HOH A . E 4 HOH 13 235 235 HOH HOH A . E 4 HOH 14 236 236 HOH HOH A . E 4 HOH 15 237 237 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 8920 ? 1 MORE -123 ? 1 'SSA (A^2)' 25130 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_465 -x-1,-y+1,z -1.0000000000 0.0000000000 0.0000000000 -79.3580000000 0.0000000000 -1.0000000000 0.0000000000 79.3580000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-08-04 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-10-13 4 'Structure model' 1 3 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' struct_ref_seq_dif 3 3 'Structure model' struct_site 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.2.0019 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DC 4 ? ? "C1'" B DC 4 ? ? N1 B DC 4 ? ? 110.58 108.30 2.28 0.30 N 2 1 "O4'" B DC 7 ? ? "C1'" B DC 7 ? ? N1 B DC 7 ? ? 111.58 108.30 3.28 0.30 N 3 1 "O4'" B DG 9 ? ? "C1'" B DG 9 ? ? N9 B DG 9 ? ? 110.12 108.30 1.82 0.30 N 4 1 "O4'" B DA 12 ? ? "C1'" B DA 12 ? ? N9 B DA 12 ? ? 111.67 108.30 3.37 0.30 N 5 1 "O4'" B DC 14 ? ? "C1'" B DC 14 ? ? N1 B DC 14 ? ? 113.20 108.30 4.90 0.30 N 6 1 "O4'" B DC 16 ? ? "C1'" B DC 16 ? ? N1 B DC 16 ? ? 110.85 108.30 2.55 0.30 N 7 1 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 102.77 108.00 -5.23 0.70 N 8 1 "O4'" B DT 20 ? ? "C1'" B DT 20 ? ? N1 B DT 20 ? ? 111.45 108.30 3.15 0.30 N 9 1 "O4'" B DT 21 ? ? "C1'" B DT 21 ? ? N1 B DT 21 ? ? 112.32 108.30 4.02 0.30 N 10 1 "C3'" B DT 21 ? ? "O3'" B DT 21 ? ? P B DC 22 ? ? 128.56 119.70 8.86 1.20 Y 11 1 "O4'" B DC 24 ? ? "C4'" B DC 24 ? ? "C3'" B DC 24 ? ? 100.91 104.50 -3.59 0.40 N 12 1 "C4'" B DC 24 ? ? "C3'" B DC 24 ? ? "C2'" B DC 24 ? ? 97.85 102.20 -4.35 0.70 N 13 1 "O4'" B DC 24 ? ? "C1'" B DC 24 ? ? N1 B DC 24 ? ? 112.90 108.30 4.60 0.30 N 14 1 "C3'" B DT 28 ? ? "O3'" B DT 28 ? ? P B DG 29 ? ? 127.50 119.70 7.80 1.20 Y 15 1 "O4'" B DG 29 ? ? "C1'" B DG 29 ? ? N9 B DG 29 ? ? 112.24 108.30 3.94 0.30 N 16 1 "O4'" B DT 30 ? ? "C1'" B DT 30 ? ? N1 B DT 30 ? ? 111.38 108.30 3.08 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 5 ? ? -100.95 47.91 2 1 GLU A 25 ? ? -58.47 4.14 3 1 ASN A 103 ? ? -147.36 38.90 4 1 SER A 118 ? ? -79.21 -168.28 5 1 HIS A 148 ? ? -69.21 1.35 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 7 ? CG ? A GLU 7 CG 2 1 Y 1 A GLU 7 ? CD ? A GLU 7 CD 3 1 Y 1 A GLU 7 ? OE1 ? A GLU 7 OE1 4 1 Y 1 A GLU 7 ? OE2 ? A GLU 7 OE2 5 1 Y 1 A GLN 11 ? CG ? A GLN 11 CG 6 1 Y 1 A GLN 11 ? CD ? A GLN 11 CD 7 1 Y 1 A GLN 11 ? OE1 ? A GLN 11 OE1 8 1 Y 1 A GLN 11 ? NE2 ? A GLN 11 NE2 9 1 Y 1 A LEU 85 ? CG ? A LEU 85 CG 10 1 Y 1 A LEU 85 ? CD1 ? A LEU 85 CD1 11 1 Y 1 A LEU 85 ? CD2 ? A LEU 85 CD2 12 1 Y 1 A TYR 115 ? CG ? A TYR 115 CG 13 1 Y 1 A TYR 115 ? CD1 ? A TYR 115 CD1 14 1 Y 1 A TYR 115 ? CD2 ? A TYR 115 CD2 15 1 Y 1 A TYR 115 ? CE1 ? A TYR 115 CE1 16 1 Y 1 A TYR 115 ? CE2 ? A TYR 115 CE2 17 1 Y 1 A TYR 115 ? CZ ? A TYR 115 CZ 18 1 Y 1 A TYR 115 ? OH ? A TYR 115 OH 19 1 Y 1 A LYS 145 ? CG ? A LYS 145 CG 20 1 Y 1 A LYS 145 ? CD ? A LYS 145 CD 21 1 Y 1 A LYS 145 ? CE ? A LYS 145 CE 22 1 Y 1 A LYS 145 ? NZ ? A LYS 145 NZ 23 1 Y 1 A GLU 171 ? CG ? A GLU 171 CG 24 1 Y 1 A GLU 171 ? CD ? A GLU 171 CD 25 1 Y 1 A GLU 171 ? OE1 ? A GLU 171 OE1 26 1 Y 1 A GLU 171 ? OE2 ? A GLU 171 OE2 27 1 Y 1 B DC 4 ? P ? B DC 5 P 28 1 Y 1 B DC 4 ? OP1 ? B DC 5 OP1 29 1 Y 1 B DC 4 ? OP2 ? B DC 5 OP2 30 1 Y 1 B DC 4 ? "O5'" ? B DC 5 "O5'" 31 1 Y 1 B DC 4 ? "C5'" ? B DC 5 "C5'" # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ALA 2 ? A ALA 2 3 1 Y 1 A SER 3 ? A SER 3 4 1 Y 1 A PRO 176 ? A PRO 176 5 1 Y 1 A ALA 177 ? A ALA 177 6 1 Y 1 A ALA 178 ? A ALA 178 7 1 Y 1 A ASP 179 ? A ASP 179 8 1 Y 1 A LEU 180 ? A LEU 180 9 1 Y 1 A PRO 181 ? A PRO 181 10 1 Y 1 A PRO 182 ? A PRO 182 11 1 Y 1 A HIS 183 ? A HIS 183 12 1 Y 1 A LEU 184 ? A LEU 184 13 1 Y 1 A MET 185 ? A MET 185 14 1 Y 1 A GLY 206 ? A GLY 206 15 1 Y 1 A LEU 207 ? A LEU 207 16 1 Y 1 A PRO 208 ? A PRO 208 17 1 Y 1 A GLY 209 ? A GLY 209 18 1 Y 1 A SER 210 ? A SER 210 19 1 Y 1 A SER 211 ? A SER 211 20 1 Y 1 A VAL 212 ? A VAL 212 21 1 Y 1 A ASP 213 ? A ASP 213 22 1 Y 1 A LYS 214 ? A LYS 214 23 1 Y 1 A LEU 215 ? A LEU 215 24 1 Y 1 A ALA 216 ? A ALA 216 25 1 Y 1 A ALA 217 ? A ALA 217 26 1 Y 1 A ALA 218 ? A ALA 218 27 1 Y 1 A LEU 219 ? A LEU 219 28 1 Y 1 A GLU 220 ? A GLU 220 29 1 Y 1 B DT 0 ? B DT 1 30 1 Y 1 B DG 1 ? B DG 2 31 1 Y 1 B DT 2 ? B DT 3 32 1 Y 1 B DA 3 ? B DA 4 33 1 Y 1 B DA 31 ? B DA 32 34 1 Y 1 B DC 32 ? B DC 33 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DC OP3 O N N 110 DC P P N N 111 DC OP1 O N N 112 DC OP2 O N N 113 DC "O5'" O N N 114 DC "C5'" C N N 115 DC "C4'" C N R 116 DC "O4'" O N N 117 DC "C3'" C N S 118 DC "O3'" O N N 119 DC "C2'" C N N 120 DC "C1'" C N R 121 DC N1 N N N 122 DC C2 C N N 123 DC O2 O N N 124 DC N3 N N N 125 DC C4 C N N 126 DC N4 N N N 127 DC C5 C N N 128 DC C6 C N N 129 DC HOP3 H N N 130 DC HOP2 H N N 131 DC "H5'" H N N 132 DC "H5''" H N N 133 DC "H4'" H N N 134 DC "H3'" H N N 135 DC "HO3'" H N N 136 DC "H2'" H N N 137 DC "H2''" H N N 138 DC "H1'" H N N 139 DC H41 H N N 140 DC H42 H N N 141 DC H5 H N N 142 DC H6 H N N 143 DG OP3 O N N 144 DG P P N N 145 DG OP1 O N N 146 DG OP2 O N N 147 DG "O5'" O N N 148 DG "C5'" C N N 149 DG "C4'" C N R 150 DG "O4'" O N N 151 DG "C3'" C N S 152 DG "O3'" O N N 153 DG "C2'" C N N 154 DG "C1'" C N R 155 DG N9 N Y N 156 DG C8 C Y N 157 DG N7 N Y N 158 DG C5 C Y N 159 DG C6 C N N 160 DG O6 O N N 161 DG N1 N N N 162 DG C2 C N N 163 DG N2 N N N 164 DG N3 N N N 165 DG C4 C Y N 166 DG HOP3 H N N 167 DG HOP2 H N N 168 DG "H5'" H N N 169 DG "H5''" H N N 170 DG "H4'" H N N 171 DG "H3'" H N N 172 DG "HO3'" H N N 173 DG "H2'" H N N 174 DG "H2''" H N N 175 DG "H1'" H N N 176 DG H8 H N N 177 DG H1 H N N 178 DG H21 H N N 179 DG H22 H N N 180 DT OP3 O N N 181 DT P P N N 182 DT OP1 O N N 183 DT OP2 O N N 184 DT "O5'" O N N 185 DT "C5'" C N N 186 DT "C4'" C N R 187 DT "O4'" O N N 188 DT "C3'" C N S 189 DT "O3'" O N N 190 DT "C2'" C N N 191 DT "C1'" C N R 192 DT N1 N N N 193 DT C2 C N N 194 DT O2 O N N 195 DT N3 N N N 196 DT C4 C N N 197 DT O4 O N N 198 DT C5 C N N 199 DT C7 C N N 200 DT C6 C N N 201 DT HOP3 H N N 202 DT HOP2 H N N 203 DT "H5'" H N N 204 DT "H5''" H N N 205 DT "H4'" H N N 206 DT "H3'" H N N 207 DT "HO3'" H N N 208 DT "H2'" H N N 209 DT "H2''" H N N 210 DT "H1'" H N N 211 DT H3 H N N 212 DT H71 H N N 213 DT H72 H N N 214 DT H73 H N N 215 DT H6 H N N 216 GLN N N N N 217 GLN CA C N S 218 GLN C C N N 219 GLN O O N N 220 GLN CB C N N 221 GLN CG C N N 222 GLN CD C N N 223 GLN OE1 O N N 224 GLN NE2 N N N 225 GLN OXT O N N 226 GLN H H N N 227 GLN H2 H N N 228 GLN HA H N N 229 GLN HB2 H N N 230 GLN HB3 H N N 231 GLN HG2 H N N 232 GLN HG3 H N N 233 GLN HE21 H N N 234 GLN HE22 H N N 235 GLN HXT H N N 236 GLU N N N N 237 GLU CA C N S 238 GLU C C N N 239 GLU O O N N 240 GLU CB C N N 241 GLU CG C N N 242 GLU CD C N N 243 GLU OE1 O N N 244 GLU OE2 O N N 245 GLU OXT O N N 246 GLU H H N N 247 GLU H2 H N N 248 GLU HA H N N 249 GLU HB2 H N N 250 GLU HB3 H N N 251 GLU HG2 H N N 252 GLU HG3 H N N 253 GLU HE2 H N N 254 GLU HXT H N N 255 GLY N N N N 256 GLY CA C N N 257 GLY C C N N 258 GLY O O N N 259 GLY OXT O N N 260 GLY H H N N 261 GLY H2 H N N 262 GLY HA2 H N N 263 GLY HA3 H N N 264 GLY HXT H N N 265 HIS N N N N 266 HIS CA C N S 267 HIS C C N N 268 HIS O O N N 269 HIS CB C N N 270 HIS CG C Y N 271 HIS ND1 N Y N 272 HIS CD2 C Y N 273 HIS CE1 C Y N 274 HIS NE2 N Y N 275 HIS OXT O N N 276 HIS H H N N 277 HIS H2 H N N 278 HIS HA H N N 279 HIS HB2 H N N 280 HIS HB3 H N N 281 HIS HD1 H N N 282 HIS HD2 H N N 283 HIS HE1 H N N 284 HIS HE2 H N N 285 HIS HXT H N N 286 HOH O O N N 287 HOH H1 H N N 288 HOH H2 H N N 289 ILE N N N N 290 ILE CA C N S 291 ILE C C N N 292 ILE O O N N 293 ILE CB C N S 294 ILE CG1 C N N 295 ILE CG2 C N N 296 ILE CD1 C N N 297 ILE OXT O N N 298 ILE H H N N 299 ILE H2 H N N 300 ILE HA H N N 301 ILE HB H N N 302 ILE HG12 H N N 303 ILE HG13 H N N 304 ILE HG21 H N N 305 ILE HG22 H N N 306 ILE HG23 H N N 307 ILE HD11 H N N 308 ILE HD12 H N N 309 ILE HD13 H N N 310 ILE HXT H N N 311 LEU N N N N 312 LEU CA C N S 313 LEU C C N N 314 LEU O O N N 315 LEU CB C N N 316 LEU CG C N N 317 LEU CD1 C N N 318 LEU CD2 C N N 319 LEU OXT O N N 320 LEU H H N N 321 LEU H2 H N N 322 LEU HA H N N 323 LEU HB2 H N N 324 LEU HB3 H N N 325 LEU HG H N N 326 LEU HD11 H N N 327 LEU HD12 H N N 328 LEU HD13 H N N 329 LEU HD21 H N N 330 LEU HD22 H N N 331 LEU HD23 H N N 332 LEU HXT H N N 333 LYS N N N N 334 LYS CA C N S 335 LYS C C N N 336 LYS O O N N 337 LYS CB C N N 338 LYS CG C N N 339 LYS CD C N N 340 LYS CE C N N 341 LYS NZ N N N 342 LYS OXT O N N 343 LYS H H N N 344 LYS H2 H N N 345 LYS HA H N N 346 LYS HB2 H N N 347 LYS HB3 H N N 348 LYS HG2 H N N 349 LYS HG3 H N N 350 LYS HD2 H N N 351 LYS HD3 H N N 352 LYS HE2 H N N 353 LYS HE3 H N N 354 LYS HZ1 H N N 355 LYS HZ2 H N N 356 LYS HZ3 H N N 357 LYS HXT H N N 358 MET N N N N 359 MET CA C N S 360 MET C C N N 361 MET O O N N 362 MET CB C N N 363 MET CG C N N 364 MET SD S N N 365 MET CE C N N 366 MET OXT O N N 367 MET H H N N 368 MET H2 H N N 369 MET HA H N N 370 MET HB2 H N N 371 MET HB3 H N N 372 MET HG2 H N N 373 MET HG3 H N N 374 MET HE1 H N N 375 MET HE2 H N N 376 MET HE3 H N N 377 MET HXT H N N 378 PHE N N N N 379 PHE CA C N S 380 PHE C C N N 381 PHE O O N N 382 PHE CB C N N 383 PHE CG C Y N 384 PHE CD1 C Y N 385 PHE CD2 C Y N 386 PHE CE1 C Y N 387 PHE CE2 C Y N 388 PHE CZ C Y N 389 PHE OXT O N N 390 PHE H H N N 391 PHE H2 H N N 392 PHE HA H N N 393 PHE HB2 H N N 394 PHE HB3 H N N 395 PHE HD1 H N N 396 PHE HD2 H N N 397 PHE HE1 H N N 398 PHE HE2 H N N 399 PHE HZ H N N 400 PHE HXT H N N 401 PRO N N N N 402 PRO CA C N S 403 PRO C C N N 404 PRO O O N N 405 PRO CB C N N 406 PRO CG C N N 407 PRO CD C N N 408 PRO OXT O N N 409 PRO H H N N 410 PRO HA H N N 411 PRO HB2 H N N 412 PRO HB3 H N N 413 PRO HG2 H N N 414 PRO HG3 H N N 415 PRO HD2 H N N 416 PRO HD3 H N N 417 PRO HXT H N N 418 SER N N N N 419 SER CA C N S 420 SER C C N N 421 SER O O N N 422 SER CB C N N 423 SER OG O N N 424 SER OXT O N N 425 SER H H N N 426 SER H2 H N N 427 SER HA H N N 428 SER HB2 H N N 429 SER HB3 H N N 430 SER HG H N N 431 SER HXT H N N 432 SO4 S S N N 433 SO4 O1 O N N 434 SO4 O2 O N N 435 SO4 O3 O N N 436 SO4 O4 O N N 437 THR N N N N 438 THR CA C N S 439 THR C C N N 440 THR O O N N 441 THR CB C N R 442 THR OG1 O N N 443 THR CG2 C N N 444 THR OXT O N N 445 THR H H N N 446 THR H2 H N N 447 THR HA H N N 448 THR HB H N N 449 THR HG1 H N N 450 THR HG21 H N N 451 THR HG22 H N N 452 THR HG23 H N N 453 THR HXT H N N 454 TRP N N N N 455 TRP CA C N S 456 TRP C C N N 457 TRP O O N N 458 TRP CB C N N 459 TRP CG C Y N 460 TRP CD1 C Y N 461 TRP CD2 C Y N 462 TRP NE1 N Y N 463 TRP CE2 C Y N 464 TRP CE3 C Y N 465 TRP CZ2 C Y N 466 TRP CZ3 C Y N 467 TRP CH2 C Y N 468 TRP OXT O N N 469 TRP H H N N 470 TRP H2 H N N 471 TRP HA H N N 472 TRP HB2 H N N 473 TRP HB3 H N N 474 TRP HD1 H N N 475 TRP HE1 H N N 476 TRP HE3 H N N 477 TRP HZ2 H N N 478 TRP HZ3 H N N 479 TRP HH2 H N N 480 TRP HXT H N N 481 TYR N N N N 482 TYR CA C N S 483 TYR C C N N 484 TYR O O N N 485 TYR CB C N N 486 TYR CG C Y N 487 TYR CD1 C Y N 488 TYR CD2 C Y N 489 TYR CE1 C Y N 490 TYR CE2 C Y N 491 TYR CZ C Y N 492 TYR OH O N N 493 TYR OXT O N N 494 TYR H H N N 495 TYR H2 H N N 496 TYR HA H N N 497 TYR HB2 H N N 498 TYR HB3 H N N 499 TYR HD1 H N N 500 TYR HD2 H N N 501 TYR HE1 H N N 502 TYR HE2 H N N 503 TYR HH H N N 504 TYR HXT H N N 505 VAL N N N N 506 VAL CA C N S 507 VAL C C N N 508 VAL O O N N 509 VAL CB C N N 510 VAL CG1 C N N 511 VAL CG2 C N N 512 VAL OXT O N N 513 VAL H H N N 514 VAL H2 H N N 515 VAL HA H N N 516 VAL HB H N N 517 VAL HG11 H N N 518 VAL HG12 H N N 519 VAL HG13 H N N 520 VAL HG21 H N N 521 VAL HG22 H N N 522 VAL HG23 H N N 523 VAL HXT H N N 524 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 GLN N CA sing N N 219 GLN N H sing N N 220 GLN N H2 sing N N 221 GLN CA C sing N N 222 GLN CA CB sing N N 223 GLN CA HA sing N N 224 GLN C O doub N N 225 GLN C OXT sing N N 226 GLN CB CG sing N N 227 GLN CB HB2 sing N N 228 GLN CB HB3 sing N N 229 GLN CG CD sing N N 230 GLN CG HG2 sing N N 231 GLN CG HG3 sing N N 232 GLN CD OE1 doub N N 233 GLN CD NE2 sing N N 234 GLN NE2 HE21 sing N N 235 GLN NE2 HE22 sing N N 236 GLN OXT HXT sing N N 237 GLU N CA sing N N 238 GLU N H sing N N 239 GLU N H2 sing N N 240 GLU CA C sing N N 241 GLU CA CB sing N N 242 GLU CA HA sing N N 243 GLU C O doub N N 244 GLU C OXT sing N N 245 GLU CB CG sing N N 246 GLU CB HB2 sing N N 247 GLU CB HB3 sing N N 248 GLU CG CD sing N N 249 GLU CG HG2 sing N N 250 GLU CG HG3 sing N N 251 GLU CD OE1 doub N N 252 GLU CD OE2 sing N N 253 GLU OE2 HE2 sing N N 254 GLU OXT HXT sing N N 255 GLY N CA sing N N 256 GLY N H sing N N 257 GLY N H2 sing N N 258 GLY CA C sing N N 259 GLY CA HA2 sing N N 260 GLY CA HA3 sing N N 261 GLY C O doub N N 262 GLY C OXT sing N N 263 GLY OXT HXT sing N N 264 HIS N CA sing N N 265 HIS N H sing N N 266 HIS N H2 sing N N 267 HIS CA C sing N N 268 HIS CA CB sing N N 269 HIS CA HA sing N N 270 HIS C O doub N N 271 HIS C OXT sing N N 272 HIS CB CG sing N N 273 HIS CB HB2 sing N N 274 HIS CB HB3 sing N N 275 HIS CG ND1 sing Y N 276 HIS CG CD2 doub Y N 277 HIS ND1 CE1 doub Y N 278 HIS ND1 HD1 sing N N 279 HIS CD2 NE2 sing Y N 280 HIS CD2 HD2 sing N N 281 HIS CE1 NE2 sing Y N 282 HIS CE1 HE1 sing N N 283 HIS NE2 HE2 sing N N 284 HIS OXT HXT sing N N 285 HOH O H1 sing N N 286 HOH O H2 sing N N 287 ILE N CA sing N N 288 ILE N H sing N N 289 ILE N H2 sing N N 290 ILE CA C sing N N 291 ILE CA CB sing N N 292 ILE CA HA sing N N 293 ILE C O doub N N 294 ILE C OXT sing N N 295 ILE CB CG1 sing N N 296 ILE CB CG2 sing N N 297 ILE CB HB sing N N 298 ILE CG1 CD1 sing N N 299 ILE CG1 HG12 sing N N 300 ILE CG1 HG13 sing N N 301 ILE CG2 HG21 sing N N 302 ILE CG2 HG22 sing N N 303 ILE CG2 HG23 sing N N 304 ILE CD1 HD11 sing N N 305 ILE CD1 HD12 sing N N 306 ILE CD1 HD13 sing N N 307 ILE OXT HXT sing N N 308 LEU N CA sing N N 309 LEU N H sing N N 310 LEU N H2 sing N N 311 LEU CA C sing N N 312 LEU CA CB sing N N 313 LEU CA HA sing N N 314 LEU C O doub N N 315 LEU C OXT sing N N 316 LEU CB CG sing N N 317 LEU CB HB2 sing N N 318 LEU CB HB3 sing N N 319 LEU CG CD1 sing N N 320 LEU CG CD2 sing N N 321 LEU CG HG sing N N 322 LEU CD1 HD11 sing N N 323 LEU CD1 HD12 sing N N 324 LEU CD1 HD13 sing N N 325 LEU CD2 HD21 sing N N 326 LEU CD2 HD22 sing N N 327 LEU CD2 HD23 sing N N 328 LEU OXT HXT sing N N 329 LYS N CA sing N N 330 LYS N H sing N N 331 LYS N H2 sing N N 332 LYS CA C sing N N 333 LYS CA CB sing N N 334 LYS CA HA sing N N 335 LYS C O doub N N 336 LYS C OXT sing N N 337 LYS CB CG sing N N 338 LYS CB HB2 sing N N 339 LYS CB HB3 sing N N 340 LYS CG CD sing N N 341 LYS CG HG2 sing N N 342 LYS CG HG3 sing N N 343 LYS CD CE sing N N 344 LYS CD HD2 sing N N 345 LYS CD HD3 sing N N 346 LYS CE NZ sing N N 347 LYS CE HE2 sing N N 348 LYS CE HE3 sing N N 349 LYS NZ HZ1 sing N N 350 LYS NZ HZ2 sing N N 351 LYS NZ HZ3 sing N N 352 LYS OXT HXT sing N N 353 MET N CA sing N N 354 MET N H sing N N 355 MET N H2 sing N N 356 MET CA C sing N N 357 MET CA CB sing N N 358 MET CA HA sing N N 359 MET C O doub N N 360 MET C OXT sing N N 361 MET CB CG sing N N 362 MET CB HB2 sing N N 363 MET CB HB3 sing N N 364 MET CG SD sing N N 365 MET CG HG2 sing N N 366 MET CG HG3 sing N N 367 MET SD CE sing N N 368 MET CE HE1 sing N N 369 MET CE HE2 sing N N 370 MET CE HE3 sing N N 371 MET OXT HXT sing N N 372 PHE N CA sing N N 373 PHE N H sing N N 374 PHE N H2 sing N N 375 PHE CA C sing N N 376 PHE CA CB sing N N 377 PHE CA HA sing N N 378 PHE C O doub N N 379 PHE C OXT sing N N 380 PHE CB CG sing N N 381 PHE CB HB2 sing N N 382 PHE CB HB3 sing N N 383 PHE CG CD1 doub Y N 384 PHE CG CD2 sing Y N 385 PHE CD1 CE1 sing Y N 386 PHE CD1 HD1 sing N N 387 PHE CD2 CE2 doub Y N 388 PHE CD2 HD2 sing N N 389 PHE CE1 CZ doub Y N 390 PHE CE1 HE1 sing N N 391 PHE CE2 CZ sing Y N 392 PHE CE2 HE2 sing N N 393 PHE CZ HZ sing N N 394 PHE OXT HXT sing N N 395 PRO N CA sing N N 396 PRO N CD sing N N 397 PRO N H sing N N 398 PRO CA C sing N N 399 PRO CA CB sing N N 400 PRO CA HA sing N N 401 PRO C O doub N N 402 PRO C OXT sing N N 403 PRO CB CG sing N N 404 PRO CB HB2 sing N N 405 PRO CB HB3 sing N N 406 PRO CG CD sing N N 407 PRO CG HG2 sing N N 408 PRO CG HG3 sing N N 409 PRO CD HD2 sing N N 410 PRO CD HD3 sing N N 411 PRO OXT HXT sing N N 412 SER N CA sing N N 413 SER N H sing N N 414 SER N H2 sing N N 415 SER CA C sing N N 416 SER CA CB sing N N 417 SER CA HA sing N N 418 SER C O doub N N 419 SER C OXT sing N N 420 SER CB OG sing N N 421 SER CB HB2 sing N N 422 SER CB HB3 sing N N 423 SER OG HG sing N N 424 SER OXT HXT sing N N 425 SO4 S O1 doub N N 426 SO4 S O2 doub N N 427 SO4 S O3 sing N N 428 SO4 S O4 sing N N 429 THR N CA sing N N 430 THR N H sing N N 431 THR N H2 sing N N 432 THR CA C sing N N 433 THR CA CB sing N N 434 THR CA HA sing N N 435 THR C O doub N N 436 THR C OXT sing N N 437 THR CB OG1 sing N N 438 THR CB CG2 sing N N 439 THR CB HB sing N N 440 THR OG1 HG1 sing N N 441 THR CG2 HG21 sing N N 442 THR CG2 HG22 sing N N 443 THR CG2 HG23 sing N N 444 THR OXT HXT sing N N 445 TRP N CA sing N N 446 TRP N H sing N N 447 TRP N H2 sing N N 448 TRP CA C sing N N 449 TRP CA CB sing N N 450 TRP CA HA sing N N 451 TRP C O doub N N 452 TRP C OXT sing N N 453 TRP CB CG sing N N 454 TRP CB HB2 sing N N 455 TRP CB HB3 sing N N 456 TRP CG CD1 doub Y N 457 TRP CG CD2 sing Y N 458 TRP CD1 NE1 sing Y N 459 TRP CD1 HD1 sing N N 460 TRP CD2 CE2 doub Y N 461 TRP CD2 CE3 sing Y N 462 TRP NE1 CE2 sing Y N 463 TRP NE1 HE1 sing N N 464 TRP CE2 CZ2 sing Y N 465 TRP CE3 CZ3 doub Y N 466 TRP CE3 HE3 sing N N 467 TRP CZ2 CH2 doub Y N 468 TRP CZ2 HZ2 sing N N 469 TRP CZ3 CH2 sing Y N 470 TRP CZ3 HZ3 sing N N 471 TRP CH2 HH2 sing N N 472 TRP OXT HXT sing N N 473 TYR N CA sing N N 474 TYR N H sing N N 475 TYR N H2 sing N N 476 TYR CA C sing N N 477 TYR CA CB sing N N 478 TYR CA HA sing N N 479 TYR C O doub N N 480 TYR C OXT sing N N 481 TYR CB CG sing N N 482 TYR CB HB2 sing N N 483 TYR CB HB3 sing N N 484 TYR CG CD1 doub Y N 485 TYR CG CD2 sing Y N 486 TYR CD1 CE1 sing Y N 487 TYR CD1 HD1 sing N N 488 TYR CD2 CE2 doub Y N 489 TYR CD2 HD2 sing N N 490 TYR CE1 CZ doub Y N 491 TYR CE1 HE1 sing N N 492 TYR CE2 CZ sing Y N 493 TYR CE2 HE2 sing N N 494 TYR CZ OH sing N N 495 TYR OH HH sing N N 496 TYR OXT HXT sing N N 497 VAL N CA sing N N 498 VAL N H sing N N 499 VAL N H2 sing N N 500 VAL CA C sing N N 501 VAL CA CB sing N N 502 VAL CA HA sing N N 503 VAL C O doub N N 504 VAL C OXT sing N N 505 VAL CB CG1 sing N N 506 VAL CB CG2 sing N N 507 VAL CB HB sing N N 508 VAL CG1 HG11 sing N N 509 VAL CG1 HG12 sing N N 510 VAL CG1 HG13 sing N N 511 VAL CG2 HG21 sing N N 512 VAL CG2 HG22 sing N N 513 VAL CG2 HG23 sing N N 514 VAL OXT HXT sing N N 515 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3LSR 'double helix' 3LSR 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DT 7 1_555 B DA 28 6_565 -0.077 -0.071 -0.240 4.634 -15.663 2.118 1 B_DT6:DA27_B B 6 ? B 27 ? 20 1 1 B DC 8 1_555 B DG 27 6_565 -0.024 -0.114 -0.449 8.950 -5.160 4.138 2 B_DC7:DG26_B B 7 ? B 26 ? 19 1 1 B DA 9 1_555 B DT 26 6_565 0.026 0.001 0.248 5.959 -5.333 -1.560 3 B_DA8:DT25_B B 8 ? B 25 ? 20 1 1 B DG 10 1_555 B DC 25 6_565 -0.654 0.003 0.521 6.822 -10.338 3.648 4 B_DG9:DC24_B B 9 ? B 24 ? 19 1 1 B DT 11 1_555 B DA 24 6_565 -0.374 -0.161 0.146 -17.561 -11.424 0.665 5 B_DT10:DA23_B B 10 ? B 23 ? 20 1 1 B DG 12 1_555 B DC 23 6_565 -0.572 -0.172 -0.123 -5.049 -13.535 3.717 6 B_DG11:DC22_B B 11 ? B 22 ? 19 1 1 B DA 13 1_555 B DT 22 6_565 0.119 -0.144 -0.337 -7.873 -9.568 -3.676 7 B_DA12:DT21_B B 12 ? B 21 ? 20 1 1 B DA 14 1_555 B DT 21 6_565 0.152 -0.073 -0.133 -0.588 -16.394 1.509 8 B_DA13:DT20_B B 13 ? B 20 ? 20 1 1 B DC 15 1_555 B DG 20 6_565 0.194 -0.023 -0.205 7.314 -10.139 1.649 9 B_DC14:DG19_B B 14 ? B 19 ? 19 1 1 B DG 16 1_555 B DC 19 6_565 -0.318 0.022 0.841 16.670 -17.560 4.295 10 B_DG15:DC18_B B 15 ? B 18 ? 19 1 1 B DC 17 1_555 B DG 18 6_565 0.037 -0.200 -0.162 -3.022 -5.582 -2.691 11 B_DC16:DG17_B B 16 ? B 17 ? 19 1 1 B DG 18 1_555 B DC 17 6_565 -0.037 -0.200 -0.162 3.022 -5.582 -2.691 12 B_DG17:DC16_B B 17 ? B 16 ? 19 1 1 B DC 19 1_555 B DG 16 6_565 0.318 0.022 0.841 -16.670 -17.560 4.295 13 B_DC18:DG15_B B 18 ? B 15 ? 19 1 1 B DG 20 1_555 B DC 15 6_565 -0.194 -0.023 -0.205 -7.315 -10.139 1.649 14 B_DG19:DC14_B B 19 ? B 14 ? 19 1 1 B DT 21 1_555 B DA 14 6_565 -0.152 -0.073 -0.133 0.588 -16.394 1.509 15 B_DT20:DA13_B B 20 ? B 13 ? 20 1 1 B DT 22 1_555 B DA 13 6_565 -0.119 -0.144 -0.337 7.873 -9.568 -3.676 16 B_DT21:DA12_B B 21 ? B 12 ? 20 1 1 B DC 23 1_555 B DG 12 6_565 0.572 -0.172 -0.123 5.049 -13.535 3.717 17 B_DC22:DG11_B B 22 ? B 11 ? 19 1 1 B DA 24 1_555 B DT 11 6_565 0.374 -0.161 0.146 17.561 -11.424 0.665 18 B_DA23:DT10_B B 23 ? B 10 ? 20 1 1 B DC 25 1_555 B DG 10 6_565 0.654 0.003 0.521 -6.822 -10.338 3.648 19 B_DC24:DG9_B B 24 ? B 9 ? 19 1 1 B DT 26 1_555 B DA 9 6_565 -0.026 0.001 0.248 -5.959 -5.333 -1.560 20 B_DT25:DA8_B B 25 ? B 8 ? 20 1 1 B DG 27 1_555 B DC 8 6_565 0.024 -0.114 -0.449 -8.950 -5.160 4.138 21 B_DG26:DC7_B B 26 ? B 7 ? 19 1 1 B DA 28 1_555 B DT 7 6_565 0.077 -0.071 -0.240 -4.634 -15.663 2.118 22 B_DA27:DT6_B B 27 ? B 6 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DT 7 1_555 B DA 28 6_565 B DC 8 1_555 B DG 27 6_565 1.488 1.157 3.178 7.963 2.861 32.411 1.517 -1.216 3.522 5.019 -13.972 33.468 1 BB_DT6DC7:DG26DA27_BB B 6 ? B 27 ? B 7 ? B 26 ? 1 B DC 8 1_555 B DG 27 6_565 B DA 9 1_555 B DT 26 6_565 -1.025 1.474 3.590 -5.595 4.900 39.242 1.512 0.762 3.844 7.217 8.241 39.914 2 BB_DC7DA8:DT25DG26_BB B 7 ? B 26 ? B 8 ? B 25 ? 1 B DA 9 1_555 B DT 26 6_565 B DG 10 1_555 B DC 25 6_565 0.833 -0.668 3.235 -3.384 4.990 28.610 -2.362 -2.354 2.962 9.959 6.752 29.225 3 BB_DA8DG9:DC24DT25_BB B 8 ? B 25 ? B 9 ? B 24 ? 1 B DG 10 1_555 B DC 25 6_565 B DT 11 1_555 B DA 24 6_565 -0.587 -1.520 3.861 3.851 -1.933 35.549 -2.144 1.610 3.853 -3.152 -6.279 35.801 4 BB_DG9DT10:DA23DC24_BB B 9 ? B 24 ? B 10 ? B 23 ? 1 B DT 11 1_555 B DA 24 6_565 B DG 12 1_555 B DC 23 6_565 0.277 0.973 3.204 2.846 6.206 31.220 0.628 0.019 3.343 11.361 -5.211 31.940 5 BB_DT10DG11:DC22DA23_BB B 10 ? B 23 ? B 11 ? B 22 ? 1 B DG 12 1_555 B DC 23 6_565 B DA 13 1_555 B DT 22 6_565 -0.834 -0.036 3.376 -3.536 8.471 34.865 -1.315 0.824 3.343 13.842 5.778 36.017 6 BB_DG11DA12:DT21DC22_BB B 11 ? B 22 ? B 12 ? B 21 ? 1 B DA 13 1_555 B DT 22 6_565 B DA 14 1_555 B DT 21 6_565 0.549 -0.534 3.163 -0.795 0.995 34.744 -1.041 -1.036 3.134 1.665 1.330 34.766 7 BB_DA12DA13:DT20DT21_BB B 12 ? B 21 ? B 13 ? B 20 ? 1 B DA 14 1_555 B DT 21 6_565 B DC 15 1_555 B DG 20 6_565 -0.251 -0.387 3.219 1.179 -1.288 30.671 -0.481 0.702 3.221 -2.433 -2.227 30.719 8 BB_DA13DC14:DG19DT20_BB B 13 ? B 20 ? B 14 ? B 19 ? 1 B DC 15 1_555 B DG 20 6_565 B DG 16 1_555 B DC 19 6_565 0.528 0.530 3.223 -3.361 15.181 29.465 -1.665 -1.497 3.050 27.561 6.101 33.235 9 BB_DC14DG15:DC18DG19_BB B 14 ? B 19 ? B 15 ? B 18 ? 1 B DG 16 1_555 B DC 19 6_565 B DC 17 1_555 B DG 18 6_565 -0.122 -0.492 3.965 7.361 -2.921 36.888 -0.302 1.348 3.897 -4.552 -11.471 37.700 10 BB_DG15DC16:DG17DC18_BB B 15 ? B 18 ? B 16 ? B 17 ? 1 B DC 17 1_555 B DG 18 6_565 B DG 18 1_555 B DC 17 6_565 0.000 0.738 3.201 0.000 7.503 36.990 0.170 0.000 3.283 11.679 0.000 37.717 11 BB_DC16DG17:DC16DG17_BB B 16 ? B 17 ? B 17 ? B 16 ? 1 B DG 18 1_555 B DC 17 6_565 B DC 19 1_555 B DG 16 6_565 0.122 -0.492 3.965 -7.361 -2.921 36.888 -0.302 -1.348 3.897 -4.552 11.471 37.700 12 BB_DG17DC18:DG15DC16_BB B 17 ? B 16 ? B 18 ? B 15 ? 1 B DC 19 1_555 B DG 16 6_565 B DG 20 1_555 B DC 15 6_565 -0.528 0.530 3.223 3.361 15.181 29.465 -1.665 1.497 3.050 27.561 -6.101 33.235 13 BB_DC18DG19:DC14DG15_BB B 18 ? B 15 ? B 19 ? B 14 ? 1 B DG 20 1_555 B DC 15 6_565 B DT 21 1_555 B DA 14 6_565 0.251 -0.387 3.219 -1.179 -1.288 30.671 -0.481 -0.702 3.221 -2.433 2.227 30.719 14 BB_DG19DT20:DA13DC14_BB B 19 ? B 14 ? B 20 ? B 13 ? 1 B DT 21 1_555 B DA 14 6_565 B DT 22 1_555 B DA 13 6_565 -0.549 -0.534 3.163 0.795 0.995 34.744 -1.041 1.036 3.134 1.665 -1.330 34.766 15 BB_DT20DT21:DA12DA13_BB B 20 ? B 13 ? B 21 ? B 12 ? 1 B DT 22 1_555 B DA 13 6_565 B DC 23 1_555 B DG 12 6_565 0.834 -0.036 3.376 3.536 8.471 34.865 -1.315 -0.824 3.343 13.842 -5.778 36.017 16 BB_DT21DC22:DG11DA12_BB B 21 ? B 12 ? B 22 ? B 11 ? 1 B DC 23 1_555 B DG 12 6_565 B DA 24 1_555 B DT 11 6_565 -0.277 0.973 3.204 -2.846 6.206 31.220 0.628 -0.019 3.343 11.361 5.211 31.940 17 BB_DC22DA23:DT10DG11_BB B 22 ? B 11 ? B 23 ? B 10 ? 1 B DA 24 1_555 B DT 11 6_565 B DC 25 1_555 B DG 10 6_565 0.587 -1.520 3.861 -3.851 -1.933 35.549 -2.144 -1.610 3.853 -3.152 6.279 35.801 18 BB_DA23DC24:DG9DT10_BB B 23 ? B 10 ? B 24 ? B 9 ? 1 B DC 25 1_555 B DG 10 6_565 B DT 26 1_555 B DA 9 6_565 -0.833 -0.668 3.235 3.384 4.990 28.610 -2.362 2.354 2.962 9.959 -6.752 29.225 19 BB_DC24DT25:DA8DG9_BB B 24 ? B 9 ? B 25 ? B 8 ? 1 B DT 26 1_555 B DA 9 6_565 B DG 27 1_555 B DC 8 6_565 1.025 1.474 3.590 5.595 4.900 39.242 1.512 -0.762 3.844 7.217 -8.241 39.914 20 BB_DT25DG26:DC7DA8_BB B 25 ? B 8 ? B 26 ? B 7 ? 1 B DG 27 1_555 B DC 8 6_565 B DA 28 1_555 B DT 7 6_565 -1.488 1.157 3.178 -7.963 2.861 32.411 1.517 1.216 3.522 5.019 13.972 33.468 21 BB_DG26DA27:DT6DC7_BB B 26 ? B 7 ? B 27 ? B 6 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SULFATE ION' SO4 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3LSP _pdbx_initial_refinement_model.details 'PDB Entry 3LSP' #