HEADER HYDROLASE 16-FEB-10 3LU2 TITLE STRUCTURE OF LMO2462, A LISTERIA MONOCYTOGENES AMIDOHYDROLASE FAMILY TITLE 2 PUTATIVE DIPEPTIDASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: LMO2462 PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA MONOCYTOGENES; SOURCE 3 ORGANISM_TAXID: 1639; SOURCE 4 STRAIN: EGD-E; SOURCE 5 GENE: LMO2462; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3)-RIL KEYWDS DIPEPTIDASE, METALLO-DEPENDENT HYDROLASE, LYSTERIA, CSGID, STRUCTURAL KEYWDS 2 GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES, KEYWDS 3 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.M.ANDERSON,Z.WAWRZAK,O.ONOPRIYENKO,J.HASSEMAN,A.EDWARDS, AUTHOR 2 A.SAVCHENKO,W.F.ANDERSON,CENTER FOR STRUCTURAL GENOMICS OF AUTHOR 3 INFECTIOUS DISEASES (CSGID) REVDAT 4 31-JAN-18 3LU2 1 JRNL REVDAT 3 01-NOV-17 3LU2 1 REMARK REVDAT 2 07-DEC-11 3LU2 1 AUTHOR VERSN REVDAT 1 09-MAR-10 3LU2 0 JRNL AUTH S.M.ANDERSON,Z.WAWRZAK,O.ONOPRIYENKO,J.HASSEMAN,A.EDWARDS, JRNL AUTH 2 A.SAVCHENKO,W.F.ANDERSON, JRNL AUTH 3 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 4 (CSGID) JRNL TITL STRUCTURE OF LMO2462, A LISTERIA MONOCYTOGENES JRNL TITL 2 AMIDOHYDROLASE FAMILY PUTATIVE DIPEPTIDASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.6_289 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.040 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 3 NUMBER OF REFLECTIONS : 41868 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.154 REMARK 3 R VALUE (WORKING SET) : 0.152 REMARK 3 FREE R VALUE : 0.185 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.550 REMARK 3 FREE R VALUE TEST SET COUNT : 1907 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.5860 - 4.7320 0.99 4314 201 0.1430 0.1540 REMARK 3 2 4.7320 - 3.7570 1.00 4233 201 0.1170 0.1490 REMARK 3 3 3.7570 - 3.2820 0.99 4148 199 0.1460 0.1780 REMARK 3 4 3.2820 - 2.9820 0.99 4130 200 0.1720 0.2100 REMARK 3 5 2.9820 - 2.7690 0.98 4075 199 0.1800 0.2190 REMARK 3 6 2.7690 - 2.6060 0.97 4029 187 0.1710 0.2250 REMARK 3 7 2.6060 - 2.4750 0.94 3918 187 0.1630 0.1980 REMARK 3 8 2.4750 - 2.3670 0.92 3805 185 0.1680 0.2130 REMARK 3 9 2.3670 - 2.2760 0.90 3731 177 0.1730 0.2210 REMARK 3 10 2.2760 - 2.1980 0.87 3578 171 0.1830 0.2460 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 53.62 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.42800 REMARK 3 B22 (A**2) : 0.42800 REMARK 3 B33 (A**2) : -0.85600 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5085 REMARK 3 ANGLE : 1.052 6872 REMARK 3 CHIRALITY : 0.071 751 REMARK 3 PLANARITY : 0.004 895 REMARK 3 DIHEDRAL : 18.331 1872 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 0:89) REMARK 3 ORIGIN FOR THE GROUP (A): 20.6980 47.2470 -0.1028 REMARK 3 T TENSOR REMARK 3 T11: 0.6006 T22: 0.3189 REMARK 3 T33: 0.9191 T12: 0.0825 REMARK 3 T13: -0.3923 T23: -0.2122 REMARK 3 L TENSOR REMARK 3 L11: 2.7084 L22: 0.4295 REMARK 3 L33: 1.3392 L12: -0.0090 REMARK 3 L13: 0.8821 L23: 0.1917 REMARK 3 S TENSOR REMARK 3 S11: 0.4980 S12: 0.5207 S13: -1.4824 REMARK 3 S21: -0.1167 S22: 0.0883 S23: 0.1654 REMARK 3 S31: 0.7091 S32: 0.1486 S33: -0.5869 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 90:182) REMARK 3 ORIGIN FOR THE GROUP (A): 13.0519 60.5587 9.0611 REMARK 3 T TENSOR REMARK 3 T11: 0.2383 T22: 0.2415 REMARK 3 T33: 0.5366 T12: -0.0150 REMARK 3 T13: -0.2109 T23: 0.0460 REMARK 3 L TENSOR REMARK 3 L11: 1.8797 L22: 0.7111 REMARK 3 L33: 1.8975 L12: -0.1536 REMARK 3 L13: 0.7615 L23: -0.6308 REMARK 3 S TENSOR REMARK 3 S11: 0.2397 S12: -0.2152 S13: -0.6059 REMARK 3 S21: -0.1164 S22: 0.1065 S23: 0.5219 REMARK 3 S31: 0.3146 S32: -0.2407 S33: -0.3378 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 183:308) REMARK 3 ORIGIN FOR THE GROUP (A): 32.6216 61.3494 9.5267 REMARK 3 T TENSOR REMARK 3 T11: 0.2889 T22: 0.2785 REMARK 3 T33: 0.2988 T12: 0.1064 REMARK 3 T13: -0.1396 T23: -0.0019 REMARK 3 L TENSOR REMARK 3 L11: 3.6723 L22: 1.2647 REMARK 3 L33: 1.0788 L12: 0.5058 REMARK 3 L13: 0.8134 L23: -0.3828 REMARK 3 S TENSOR REMARK 3 S11: 0.1827 S12: 0.2506 S13: -0.3710 REMARK 3 S21: -0.1799 S22: -0.0691 S23: 0.1305 REMARK 3 S31: 0.1699 S32: 0.2083 S33: -0.1225 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN B AND RESID 0:116) REMARK 3 ORIGIN FOR THE GROUP (A): -17.5812 73.1956 -11.8083 REMARK 3 T TENSOR REMARK 3 T11: 0.1613 T22: 0.2714 REMARK 3 T33: 0.1889 T12: -0.0501 REMARK 3 T13: -0.0704 T23: -0.0111 REMARK 3 L TENSOR REMARK 3 L11: 3.1083 L22: 2.3374 REMARK 3 L33: 1.9108 L12: 0.4403 REMARK 3 L13: 0.2010 L23: 0.7521 REMARK 3 S TENSOR REMARK 3 S11: 0.0327 S12: 0.2850 S13: -0.3204 REMARK 3 S21: 0.1274 S22: 0.0623 S23: 0.0712 REMARK 3 S31: 0.1661 S32: 0.0653 S33: -0.0915 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN B AND RESID 117:191) REMARK 3 ORIGIN FOR THE GROUP (A): -0.2068 80.1696 -5.4226 REMARK 3 T TENSOR REMARK 3 T11: 0.1363 T22: 0.3815 REMARK 3 T33: 0.2654 T12: -0.0287 REMARK 3 T13: -0.0805 T23: -0.0046 REMARK 3 L TENSOR REMARK 3 L11: 1.8551 L22: 0.9979 REMARK 3 L33: 1.6403 L12: -0.0150 REMARK 3 L13: 1.3580 L23: 0.2735 REMARK 3 S TENSOR REMARK 3 S11: -0.0323 S12: 0.3019 S13: -0.0480 REMARK 3 S21: 0.0493 S22: 0.0915 S23: -0.2576 REMARK 3 S31: 0.0128 S32: 0.3505 S33: -0.0477 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN B AND RESID 192:308) REMARK 3 ORIGIN FOR THE GROUP (A): -18.2355 90.5421 -0.7490 REMARK 3 T TENSOR REMARK 3 T11: 0.2365 T22: 0.2224 REMARK 3 T33: 0.1611 T12: -0.0446 REMARK 3 T13: -0.0572 T23: 0.0737 REMARK 3 L TENSOR REMARK 3 L11: 2.5076 L22: 1.5407 REMARK 3 L33: 1.3320 L12: -0.5331 REMARK 3 L13: 0.1476 L23: 0.2933 REMARK 3 S TENSOR REMARK 3 S11: -0.0690 S12: -0.0531 S13: 0.2103 REMARK 3 S21: 0.4045 S22: 0.0694 S23: -0.1076 REMARK 3 S31: -0.0517 S32: 0.0789 S33: 0.0276 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3LU2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-FEB-10. REMARK 100 THE DEPOSITION ID IS D_1000057730. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-DEC-09 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.18072 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 OPTICS : BERYLLIUM LENS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43794 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.500 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : 0.55700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 3350, 200MM NA TARTRATE, 100MM REMARK 280 TRIS, PH 8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 15.47067 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 30.94133 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 23.20600 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 38.67667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 7.73533 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 25 16.34 -147.43 REMARK 500 TRP A 132 -142.96 -90.80 REMARK 500 HIS A 192 87.83 -161.74 REMARK 500 SER A 194 -165.63 -117.98 REMARK 500 ASP A 263 -6.11 77.49 REMARK 500 SER A 299 -32.90 -158.23 REMARK 500 HIS B 7 113.22 -160.43 REMARK 500 ASP B 25 22.24 -150.07 REMARK 500 TRP B 132 -138.77 -91.44 REMARK 500 HIS B 192 89.34 -161.62 REMARK 500 ASP B 263 -4.51 73.04 REMARK 500 SER B 299 -39.71 -160.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 310 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: IDP02710 RELATED DB: TARGETDB DBREF 3LU2 A 1 308 UNP Q8Y4H9 Q8Y4H9_LISMO 1 308 DBREF 3LU2 B 1 308 UNP Q8Y4H9 Q8Y4H9_LISMO 1 308 SEQADV 3LU2 SER A -2 UNP Q8Y4H9 EXPRESSION TAG SEQADV 3LU2 ASN A -1 UNP Q8Y4H9 EXPRESSION TAG SEQADV 3LU2 ALA A 0 UNP Q8Y4H9 EXPRESSION TAG SEQADV 3LU2 SER B -2 UNP Q8Y4H9 EXPRESSION TAG SEQADV 3LU2 ASN B -1 UNP Q8Y4H9 EXPRESSION TAG SEQADV 3LU2 ALA B 0 UNP Q8Y4H9 EXPRESSION TAG SEQRES 1 A 311 SER ASN ALA MSE ARG VAL ILE ASP THR HIS CYS ASP ALA SEQRES 2 A 311 LEU TYR LYS LEU GLN ALA GLY LYS GLY LYS TYR THR PHE SEQRES 3 A 311 GLN ASP ALA GLU GLU LEU ASP VAL ASN PHE GLU ARG LEU SEQRES 4 A 311 ILE GLU ALA LYS MSE LEU LEU GLN GLY PHE ALA ILE PHE SEQRES 5 A 311 LEU ASP GLU ASP ILE PRO VAL GLU HIS LYS TRP LYS LYS SEQRES 6 A 311 ALA VAL GLU GLN VAL ASN ILE PHE LYS GLN HIS VAL LEU SEQRES 7 A 311 HIS LYS GLY GLY ILE ILE HIS HIS VAL LYS LYS TRP CYS SEQRES 8 A 311 ASP LEU GLU ASN LEU PRO GLU ASP LYS ILE GLY ALA MSE SEQRES 9 A 311 LEU THR LEU GLU GLY ILE GLU PRO ILE GLY ARG ASP LEU SEQRES 10 A 311 ASP LYS LEU THR GLN LEU LEU ASP GLY GLY VAL LEU SER SEQRES 11 A 311 VAL GLY LEU THR TRP ASN ASN ALA ASN LEU ALA ALA ASP SEQRES 12 A 311 GLY ILE MSE GLU GLU ARG GLY ALA GLY LEU THR ARG PHE SEQRES 13 A 311 GLY LYS ASP ILE ILE HIS LEU LEU ASN GLU ARG LYS VAL SEQRES 14 A 311 PHE THR ASP VAL SER HIS LEU SER VAL LYS ALA PHE TRP SEQRES 15 A 311 GLU THR LEU GLU GLN ALA GLU PHE VAL ILE ALA SER HIS SEQRES 16 A 311 SER SER ALA LYS ALA ILE CYS ALA HIS PRO ARG ASN LEU SEQRES 17 A 311 ASP ASP GLU GLN ILE LYS ALA MSE ILE GLU HIS ASP ALA SEQRES 18 A 311 MSE ILE HIS VAL ILE PHE HIS PRO LEU PHE THR THR ASN SEQRES 19 A 311 ASP GLY VAL ALA ASP ILE GLU ASP VAL ILE ARG HIS ILE SEQRES 20 A 311 ASP HIS ILE CYS GLU LEU GLY GLY MSE LYS ASN ILE GLY SEQRES 21 A 311 PHE GLY SER ASP PHE ASP GLY ILE PRO ASP HIS VAL LYS SEQRES 22 A 311 GLY LEU GLU HIS ALA GLY LYS TYR GLN ASN PHE LEU GLU SEQRES 23 A 311 THR LEU GLY LYS HIS TYR THR LYS GLU GLU VAL GLU GLY SEQRES 24 A 311 PHE ALA SER ARG ASN PHE LEU ASN HIS LEU PRO LYS SEQRES 1 B 311 SER ASN ALA MSE ARG VAL ILE ASP THR HIS CYS ASP ALA SEQRES 2 B 311 LEU TYR LYS LEU GLN ALA GLY LYS GLY LYS TYR THR PHE SEQRES 3 B 311 GLN ASP ALA GLU GLU LEU ASP VAL ASN PHE GLU ARG LEU SEQRES 4 B 311 ILE GLU ALA LYS MSE LEU LEU GLN GLY PHE ALA ILE PHE SEQRES 5 B 311 LEU ASP GLU ASP ILE PRO VAL GLU HIS LYS TRP LYS LYS SEQRES 6 B 311 ALA VAL GLU GLN VAL ASN ILE PHE LYS GLN HIS VAL LEU SEQRES 7 B 311 HIS LYS GLY GLY ILE ILE HIS HIS VAL LYS LYS TRP CYS SEQRES 8 B 311 ASP LEU GLU ASN LEU PRO GLU ASP LYS ILE GLY ALA MSE SEQRES 9 B 311 LEU THR LEU GLU GLY ILE GLU PRO ILE GLY ARG ASP LEU SEQRES 10 B 311 ASP LYS LEU THR GLN LEU LEU ASP GLY GLY VAL LEU SER SEQRES 11 B 311 VAL GLY LEU THR TRP ASN ASN ALA ASN LEU ALA ALA ASP SEQRES 12 B 311 GLY ILE MSE GLU GLU ARG GLY ALA GLY LEU THR ARG PHE SEQRES 13 B 311 GLY LYS ASP ILE ILE HIS LEU LEU ASN GLU ARG LYS VAL SEQRES 14 B 311 PHE THR ASP VAL SER HIS LEU SER VAL LYS ALA PHE TRP SEQRES 15 B 311 GLU THR LEU GLU GLN ALA GLU PHE VAL ILE ALA SER HIS SEQRES 16 B 311 SER SER ALA LYS ALA ILE CYS ALA HIS PRO ARG ASN LEU SEQRES 17 B 311 ASP ASP GLU GLN ILE LYS ALA MSE ILE GLU HIS ASP ALA SEQRES 18 B 311 MSE ILE HIS VAL ILE PHE HIS PRO LEU PHE THR THR ASN SEQRES 19 B 311 ASP GLY VAL ALA ASP ILE GLU ASP VAL ILE ARG HIS ILE SEQRES 20 B 311 ASP HIS ILE CYS GLU LEU GLY GLY MSE LYS ASN ILE GLY SEQRES 21 B 311 PHE GLY SER ASP PHE ASP GLY ILE PRO ASP HIS VAL LYS SEQRES 22 B 311 GLY LEU GLU HIS ALA GLY LYS TYR GLN ASN PHE LEU GLU SEQRES 23 B 311 THR LEU GLY LYS HIS TYR THR LYS GLU GLU VAL GLU GLY SEQRES 24 B 311 PHE ALA SER ARG ASN PHE LEU ASN HIS LEU PRO LYS MODRES 3LU2 MSE A 1 MET SELENOMETHIONINE MODRES 3LU2 MSE A 41 MET SELENOMETHIONINE MODRES 3LU2 MSE A 101 MET SELENOMETHIONINE MODRES 3LU2 MSE A 143 MET SELENOMETHIONINE MODRES 3LU2 MSE A 213 MET SELENOMETHIONINE MODRES 3LU2 MSE A 219 MET SELENOMETHIONINE MODRES 3LU2 MSE A 253 MET SELENOMETHIONINE MODRES 3LU2 MSE B 1 MET SELENOMETHIONINE MODRES 3LU2 MSE B 41 MET SELENOMETHIONINE MODRES 3LU2 MSE B 101 MET SELENOMETHIONINE MODRES 3LU2 MSE B 143 MET SELENOMETHIONINE MODRES 3LU2 MSE B 213 MET SELENOMETHIONINE MODRES 3LU2 MSE B 219 MET SELENOMETHIONINE MODRES 3LU2 MSE B 253 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 41 8 HET MSE A 101 8 HET MSE A 143 8 HET MSE A 213 8 HET MSE A 219 8 HET MSE A 253 8 HET MSE B 1 8 HET MSE B 41 8 HET MSE B 101 8 HET MSE B 143 8 HET MSE B 213 8 HET MSE B 219 8 HET MSE B 253 8 HET ZN A 309 1 HET ZN A 310 1 HET ZN B 309 1 HET ZN B 310 1 HETNAM MSE SELENOMETHIONINE HETNAM ZN ZINC ION FORMUL 1 MSE 14(C5 H11 N O2 SE) FORMUL 3 ZN 4(ZN 2+) FORMUL 7 HOH *281(H2 O) HELIX 1 1 ASP A 9 LYS A 18 1 10 HELIX 2 2 ASN A 32 LYS A 40 1 9 HELIX 3 3 HIS A 58 VAL A 74 1 17 HELIX 4 4 HIS A 76 GLY A 79 5 4 HELIX 5 5 LYS A 86 ASN A 92 1 7 HELIX 6 6 ILE A 107 GLY A 111 5 5 HELIX 7 7 ASP A 113 GLY A 123 1 11 HELIX 8 8 THR A 151 ARG A 164 1 14 HELIX 9 9 SER A 174 ALA A 185 1 12 HELIX 10 10 ASP A 206 HIS A 216 1 11 HELIX 11 11 HIS A 225 THR A 229 5 5 HELIX 12 12 ASP A 236 LEU A 250 1 15 HELIX 13 13 GLY A 252 LYS A 254 5 3 HELIX 14 14 HIS A 274 GLY A 276 5 3 HELIX 15 15 LYS A 277 GLY A 286 1 10 HELIX 16 16 THR A 290 SER A 299 1 10 HELIX 17 17 SER A 299 ASN A 304 1 6 HELIX 18 18 ASP B 9 GLY B 17 1 9 HELIX 19 19 ASN B 32 LYS B 40 1 9 HELIX 20 20 PRO B 55 GLU B 57 5 3 HELIX 21 21 HIS B 58 VAL B 74 1 17 HELIX 22 22 HIS B 76 GLY B 79 5 4 HELIX 23 23 LYS B 86 ASN B 92 1 7 HELIX 24 24 ILE B 107 GLY B 111 5 5 HELIX 25 25 ASP B 113 GLY B 123 1 11 HELIX 26 26 THR B 151 ARG B 164 1 14 HELIX 27 27 SER B 174 ALA B 185 1 12 HELIX 28 28 ASP B 206 HIS B 216 1 11 HELIX 29 29 HIS B 225 THR B 230 1 6 HELIX 30 30 ASP B 236 LEU B 250 1 15 HELIX 31 31 GLY B 252 LYS B 254 5 3 HELIX 32 32 HIS B 274 GLY B 276 5 3 HELIX 33 33 LYS B 277 GLY B 286 1 10 HELIX 34 34 THR B 290 SER B 299 1 10 HELIX 35 35 SER B 299 ASN B 304 1 6 SHEET 1 A10 ILE A 81 HIS A 83 0 SHEET 2 A10 ILE A 98 GLU A 105 1 O ILE A 98 N HIS A 82 SHEET 3 A10 VAL A 125 GLY A 129 1 O GLY A 129 N LEU A 104 SHEET 4 A10 PHE A 167 ASP A 169 1 O ASP A 169 N VAL A 128 SHEET 5 A10 VAL A 188 ALA A 190 1 O ILE A 189 N THR A 168 SHEET 6 A10 MSE A 219 VAL A 222 1 O HIS A 221 N ALA A 190 SHEET 7 A10 ILE A 256 PHE A 258 1 O GLY A 257 N ILE A 220 SHEET 8 A10 VAL A 3 CYS A 8 1 N THR A 6 O PHE A 258 SHEET 9 A10 MSE A 41 ILE A 48 1 O LEU A 42 N VAL A 3 SHEET 10 A10 ILE A 98 GLU A 105 1 O MSE A 101 N PHE A 46 SHEET 1 B10 ILE B 81 HIS B 83 0 SHEET 2 B10 ILE B 98 GLU B 105 1 O ILE B 98 N HIS B 82 SHEET 3 B10 VAL B 125 GLY B 129 1 O GLY B 129 N LEU B 104 SHEET 4 B10 PHE B 167 ASP B 169 1 O ASP B 169 N VAL B 128 SHEET 5 B10 VAL B 188 ALA B 190 1 O ILE B 189 N THR B 168 SHEET 6 B10 MSE B 219 VAL B 222 1 O HIS B 221 N ALA B 190 SHEET 7 B10 ILE B 256 PHE B 258 1 O GLY B 257 N ILE B 220 SHEET 8 B10 VAL B 3 CYS B 8 1 N THR B 6 O PHE B 258 SHEET 9 B10 MSE B 41 ILE B 48 1 O LEU B 42 N VAL B 3 SHEET 10 B10 ILE B 98 GLU B 105 1 O MSE B 101 N PHE B 46 LINK C ALA A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N ARG A 2 1555 1555 1.33 LINK C LYS A 40 N MSE A 41 1555 1555 1.33 LINK C MSE A 41 N LEU A 42 1555 1555 1.32 LINK C ALA A 100 N MSE A 101 1555 1555 1.33 LINK C MSE A 101 N LEU A 102 1555 1555 1.32 LINK C ILE A 142 N MSE A 143 1555 1555 1.33 LINK C MSE A 143 N GLU A 144 1555 1555 1.33 LINK C ALA A 212 N MSE A 213 1555 1555 1.33 LINK C MSE A 213 N ILE A 214 1555 1555 1.33 LINK C ALA A 218 N MSE A 219 1555 1555 1.33 LINK C MSE A 219 N ILE A 220 1555 1555 1.33 LINK C GLY A 252 N MSE A 253 1555 1555 1.33 LINK C MSE A 253 N LYS A 254 1555 1555 1.33 LINK C ALA B 0 N MSE B 1 1555 1555 1.32 LINK C MSE B 1 N ARG B 2 1555 1555 1.32 LINK C LYS B 40 N MSE B 41 1555 1555 1.33 LINK C MSE B 41 N LEU B 42 1555 1555 1.33 LINK C ALA B 100 N MSE B 101 1555 1555 1.33 LINK C MSE B 101 N LEU B 102 1555 1555 1.33 LINK C ILE B 142 N MSE B 143 1555 1555 1.33 LINK C MSE B 143 N GLU B 144 1555 1555 1.33 LINK C ALA B 212 N MSE B 213 1555 1555 1.34 LINK C MSE B 213 N ILE B 214 1555 1555 1.33 LINK C ALA B 218 N MSE B 219 1555 1555 1.33 LINK C MSE B 219 N ILE B 220 1555 1555 1.33 LINK C GLY B 252 N MSE B 253 1555 1555 1.33 LINK C MSE B 253 N LYS B 254 1555 1555 1.33 LINK ZN ZN B 310 O HOH B 431 1555 1555 2.52 LINK ZN ZN B 309 O HOH B 431 1555 1555 2.67 LINK ZN ZN A 309 O HOH A 395 1555 1555 2.68 SITE 1 AC1 7 GLU A 105 HIS A 172 HIS A 192 ASP A 261 SITE 2 AC1 7 ZN A 310 HOH A 393 HOH A 395 SITE 1 AC2 4 HIS A 7 ASP A 9 GLU A 105 ZN A 309 SITE 1 AC3 6 GLU B 105 HIS B 172 HIS B 192 ZN B 310 SITE 2 AC3 6 HOH B 420 HOH B 431 SITE 1 AC4 5 HIS B 7 ASP B 9 GLU B 105 ZN B 309 SITE 2 AC4 5 HOH B 431 CRYST1 179.088 179.088 46.412 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005584 0.003224 0.000000 0.00000 SCALE2 0.000000 0.006448 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021546 0.00000