HEADER ISOMERASE 18-FEB-10 3LUO TITLE CRYSTAL STRUCTURE AND FUNCTIONAL CHARACTERIZATION OF THE THERMOPHILIC TITLE 2 PROLYL ISOMERASE AND CHAPERONE SLYD COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 5.2.1.8; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: SUC-ALA-LEU-PRO-PHE-PNA; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES; COMPND 10 OTHER_DETAILS: THE BOUND SUBSTRATE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 300852; SOURCE 4 STRAIN: HB8; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-VECTOR; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 OTHER_DETAILS: THE PEPTIDE SUBSTRATE WAS PURCHASED FROM A COMPANY. KEYWDS PROLYL CIS TRANS ISOMERASE, CHAPERONE FUNCTION, TWO DOMAIN PROTEIN, KEYWDS 2 NI(2+) ZN(2+) BINDING, SLYD, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR C.LOEW,P.NEUMANN,U.WEININGER,M.T.STUBBS,J.BALBACH REVDAT 4 01-NOV-23 3LUO 1 REMARK SEQADV LINK REVDAT 3 26-FEB-14 3LUO 1 REMARK VERSN REVDAT 2 28-APR-10 3LUO 1 JRNL REVDAT 1 31-MAR-10 3LUO 0 JRNL AUTH C.LOEW,P.NEUMANN,H.TIDOW,U.WEININGER,C.HAUPT, JRNL AUTH 2 B.FRIEDRICH-EPLER,C.SCHOLZ,M.T.STUBBS,J.BALBACH JRNL TITL CRYSTAL STRUCTURE DETERMINATION AND FUNCTIONAL JRNL TITL 2 CHARACTERIZATION OF THE METALLOCHAPERONE SLYD FROM THERMUS JRNL TITL 3 THERMOPHILUS JRNL REF J.MOL.BIOL. V. 398 375 2010 JRNL REFN ISSN 0022-2836 JRNL PMID 20230833 JRNL DOI 10.1016/J.JMB.2010.03.014 REMARK 2 REMARK 2 RESOLUTION. 2.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.69 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.240 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 7636 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 731 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.6940 - 6.2270 1.00 925 51 0.2540 0.2250 REMARK 3 2 6.2270 - 4.9690 1.00 920 48 0.1700 0.1640 REMARK 3 3 4.9690 - 4.3480 1.00 928 49 0.1390 0.1860 REMARK 3 4 4.3480 - 3.9540 1.00 900 47 0.1600 0.2100 REMARK 3 5 3.9540 - 3.6730 1.00 923 50 0.1820 0.1910 REMARK 3 6 3.6730 - 3.4580 1.00 936 50 0.1890 0.3120 REMARK 3 7 3.4580 - 3.2850 1.00 892 46 0.1630 0.2390 REMARK 3 8 3.2850 - 3.1430 1.00 951 51 0.1830 0.1510 REMARK 3 9 3.1430 - 3.0220 1.00 906 48 0.2130 0.3150 REMARK 3 10 3.0220 - 2.9180 1.00 913 48 0.2220 0.2180 REMARK 3 11 2.9180 - 2.8270 1.00 940 49 0.2250 0.2640 REMARK 3 12 2.8270 - 2.7470 1.00 899 49 0.2620 0.3440 REMARK 3 13 2.7470 - 2.6750 1.00 923 48 0.2920 0.3670 REMARK 3 14 2.6750 - 2.6090 0.99 914 48 0.2890 0.3910 REMARK 3 15 2.6090 - 2.5500 1.00 923 49 0.2880 0.2780 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 K_SOL : 0.41 REMARK 3 B_SOL : 92.51 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 68.81 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 94.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.023 1195 REMARK 3 ANGLE : 0.928 1614 REMARK 3 CHIRALITY : 0.058 174 REMARK 3 PLANARITY : 0.004 219 REMARK 3 DIHEDRAL : 18.271 431 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 1:68 OR RESID 118:151) REMARK 3 ORIGIN FOR THE GROUP (A): 7.2791 -11.9273 -19.3250 REMARK 3 T TENSOR REMARK 3 T11: 0.4228 T22: 0.3342 REMARK 3 T33: 0.5429 T12: 0.0799 REMARK 3 T13: 0.0822 T23: 0.0681 REMARK 3 L TENSOR REMARK 3 L11: 0.7820 L22: 0.4777 REMARK 3 L33: 1.7705 L12: 0.2454 REMARK 3 L13: -0.0440 L23: 0.3618 REMARK 3 S TENSOR REMARK 3 S11: 0.3214 S12: -0.1575 S13: 0.1354 REMARK 3 S21: -0.2586 S22: 0.0001 S23: -0.2803 REMARK 3 S31: -0.0161 S32: 0.1942 S33: -0.2449 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 69:117) REMARK 3 ORIGIN FOR THE GROUP (A): 19.9229 -25.8474 -43.2071 REMARK 3 T TENSOR REMARK 3 T11: 1.4281 T22: 1.0020 REMARK 3 T33: 1.2107 T12: 0.2621 REMARK 3 T13: -0.0070 T23: 0.0502 REMARK 3 L TENSOR REMARK 3 L11: 1.5764 L22: 1.2920 REMARK 3 L33: -0.7523 L12: -0.3475 REMARK 3 L13: 0.0706 L23: 0.8771 REMARK 3 S TENSOR REMARK 3 S11: -0.0188 S12: -0.4142 S13: 0.2669 REMARK 3 S21: 0.2252 S22: -0.0823 S23: -0.2203 REMARK 3 S31: -0.5473 S32: -0.2406 S33: -0.1462 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 7.1653 -17.5696 -24.5964 REMARK 3 T TENSOR REMARK 3 T11: 0.7594 T22: 1.0162 REMARK 3 T33: 0.8180 T12: 0.3224 REMARK 3 T13: 0.1531 T23: 0.2085 REMARK 3 L TENSOR REMARK 3 L11: 2.0105 L22: 4.8183 REMARK 3 L33: 2.3376 L12: 4.0425 REMARK 3 L13: -1.4061 L23: 0.0585 REMARK 3 S TENSOR REMARK 3 S11: -0.1098 S12: -0.1180 S13: 0.1118 REMARK 3 S21: -0.0644 S22: -0.1955 S23: 0.0950 REMARK 3 S31: 0.3993 S32: 0.8476 S33: 0.2905 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: TLS PARAMETERS HAVE BEEN INCLUDED IN REMARK 3 REFINEMNT REMARK 4 REMARK 4 3LUO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-MAR-10. REMARK 100 THE DEPOSITION ID IS D_1000057752. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9841 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7636 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.550 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.350 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : 0.05400 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 23.7700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.65 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.20 REMARK 200 R MERGE FOR SHELL (I) : 0.64300 REMARK 200 R SYM FOR SHELL (I) : 0.66200 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 3CGM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10MG/ML N-SUC-ALA-LEU-PRO-PHE-PNA, 2M REMARK 280 AMMONIUM SULFATE, 5 % PEG 400, 100MM MES, PH 6.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y,-Z REMARK 290 16555 X,-Y,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z,-X,-Y+1/2 REMARK 290 19555 -Z,-X+1/2,Y REMARK 290 20555 -Z+1/2,X,-Y REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z,-X REMARK 290 23555 Y,-Z,-X+1/2 REMARK 290 24555 -Y,-Z+1/2,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 55.70000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.70000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 55.70000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.70000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 55.70000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 55.70000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 55.70000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 55.70000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 55.70000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 55.70000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 55.70000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 55.70000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 55.70000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 55.70000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 55.70000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 55.70000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 55.70000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 55.70000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 55.70000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 55.70000 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 55.70000 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 55.70000 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 55.70000 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 55.70000 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 55.70000 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 55.70000 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 55.70000 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 55.70000 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 55.70000 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 55.70000 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 55.70000 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 55.70000 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 55.70000 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 55.70000 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 55.70000 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 55.70000 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -386.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 81 REMARK 465 ASP A 82 REMARK 465 ALA A 83 REMARK 465 GLU A 84 REMARK 465 VAL A 85 REMARK 465 VAL A 86 REMARK 465 GLY A 152 REMARK 465 HIS A 153 REMARK 465 HIS A 154 REMARK 465 HIS A 155 REMARK 465 HIS A 156 REMARK 465 HIS A 157 REMARK 465 HIS A 158 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 62 -100.26 -118.98 REMARK 500 ASN A 99 80.08 70.84 REMARK 500 PRO A 100 150.74 -48.52 REMARK 500 ASN A 118 159.19 -49.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 162 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 49 OE1 REMARK 620 2 GLU A 49 OE2 53.3 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 160 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 145 ND1 REMARK 620 2 HIS A 147 NE2 116.5 REMARK 620 3 HIS A 149 NE2 132.5 94.7 REMARK 620 4 HOH A 163 O 116.8 95.2 93.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 159 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 160 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 161 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 162 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3CGM RELATED DB: PDB REMARK 900 ANOTHER CRYSTAL FORM OF THE SAME PROTEIN REMARK 900 RELATED ID: 3CGN RELATED DB: PDB REMARK 900 ANOTHER CRYSTAL FORM OF THE SAME PROTEIN DBREF 3LUO A 1 149 UNP Q5SLE7 Q5SLE7_THET8 1 149 DBREF 3LUO B 1 6 PDB 3LUO 3LUO 1 6 SEQADV 3LUO PRO A 150 UNP Q5SLE7 EXPRESSION TAG SEQADV 3LUO SER A 151 UNP Q5SLE7 EXPRESSION TAG SEQADV 3LUO GLY A 152 UNP Q5SLE7 EXPRESSION TAG SEQADV 3LUO HIS A 153 UNP Q5SLE7 EXPRESSION TAG SEQADV 3LUO HIS A 154 UNP Q5SLE7 EXPRESSION TAG SEQADV 3LUO HIS A 155 UNP Q5SLE7 EXPRESSION TAG SEQADV 3LUO HIS A 156 UNP Q5SLE7 EXPRESSION TAG SEQADV 3LUO HIS A 157 UNP Q5SLE7 EXPRESSION TAG SEQADV 3LUO HIS A 158 UNP Q5SLE7 EXPRESSION TAG SEQRES 1 A 158 MET LYS VAL GLY GLN ASP LYS VAL VAL THR ILE ARG TYR SEQRES 2 A 158 THR LEU GLN VAL GLU GLY GLU VAL LEU ASP GLN GLY GLU SEQRES 3 A 158 LEU SER TYR LEU HIS GLY HIS ARG ASN LEU ILE PRO GLY SEQRES 4 A 158 LEU GLU GLU ALA LEU GLU GLY ARG GLU GLU GLY GLU ALA SEQRES 5 A 158 PHE GLN ALA HIS VAL PRO ALA GLU LYS ALA TYR GLY PRO SEQRES 6 A 158 HIS ASP PRO GLU GLY VAL GLN VAL VAL PRO LEU SER ALA SEQRES 7 A 158 PHE PRO GLU ASP ALA GLU VAL VAL PRO GLY ALA GLN PHE SEQRES 8 A 158 TYR ALA GLN ASP MET GLU GLY ASN PRO MET PRO LEU THR SEQRES 9 A 158 VAL VAL ALA VAL GLU GLY GLU GLU VAL THR VAL ASP PHE SEQRES 10 A 158 ASN HIS PRO LEU ALA GLY LYS ASP LEU ASP PHE GLN VAL SEQRES 11 A 158 GLU VAL VAL LYS VAL ARG GLU ALA THR PRO GLU GLU LEU SEQRES 12 A 158 LEU HIS GLY HIS ALA HIS PRO SER GLY HIS HIS HIS HIS SEQRES 13 A 158 HIS HIS SEQRES 1 B 6 SIN ALA LEU PRO ALA NIT HET SIN B 1 7 HET NIT B 6 10 HET ZN A 159 1 HET ZN A 160 1 HET ZN A 161 1 HET ZN A 162 1 HETNAM SIN SUCCINIC ACID HETNAM NIT 4-NITROANILINE HETNAM ZN ZINC ION HETSYN NIT PARANITROANILINE FORMUL 2 SIN C4 H6 O4 FORMUL 2 NIT C6 H6 N2 O2 FORMUL 3 ZN 4(ZN 2+) FORMUL 7 HOH *21(H2 O) HELIX 1 1 ILE A 37 GLU A 45 1 9 HELIX 2 2 PRO A 58 ALA A 62 5 5 HELIX 3 3 ASP A 67 GLU A 69 5 3 HELIX 4 4 SER A 77 PHE A 79 5 3 HELIX 5 5 THR A 139 GLY A 146 1 8 SHEET 1 A 4 GLU A 20 LEU A 30 0 SHEET 2 A 4 LYS A 7 VAL A 17 -1 N VAL A 17 O GLU A 20 SHEET 3 A 4 LEU A 126 GLU A 137 -1 O ARG A 136 N VAL A 8 SHEET 4 A 4 ALA A 52 VAL A 57 -1 N VAL A 57 O LEU A 126 SHEET 1 B 4 VAL A 71 PRO A 75 0 SHEET 2 B 4 GLU A 112 ASP A 116 -1 O VAL A 115 N GLN A 72 SHEET 3 B 4 LEU A 103 GLU A 109 -1 N ALA A 107 O THR A 114 SHEET 4 B 4 ALA A 89 PHE A 91 -1 N PHE A 91 O LEU A 103 LINK C4 SIN B 1 N ALA B 2 1555 1555 1.33 LINK C ALA B 5 N1 NIT B 6 1555 1555 1.33 LINK OE1 GLU A 49 ZN ZN A 162 1555 1555 2.21 LINK OE2 GLU A 49 ZN ZN A 162 1555 1555 2.61 LINK ND1 HIS A 145 ZN ZN A 160 1555 1555 2.28 LINK NE2 HIS A 147 ZN ZN A 160 1555 1555 2.44 LINK NE2 HIS A 149 ZN ZN A 160 1555 1555 2.07 LINK ZN ZN A 160 O HOH A 163 1555 1555 2.25 CISPEP 1 LEU B 3 PRO B 4 0 5.04 SITE 1 AC1 5 GLY A 19 GLU A 20 ALA A 52 GLU A 137 SITE 2 AC1 5 HOH A 177 SITE 1 AC2 4 HIS A 145 HIS A 147 HIS A 149 HOH A 163 SITE 1 AC3 5 TYR A 29 LEU A 30 ASN A 35 HIS A 147 SITE 2 AC3 5 ALA A 148 SITE 1 AC4 1 GLU A 49 CRYST1 111.400 111.400 111.400 90.00 90.00 90.00 I 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008977 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008977 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008977 0.00000