HEADER ISOMERASE 18-FEB-10 3LUY TITLE PUTATIVE CHORISMATE MUTASE FROM BIFIDOBACTERIUM ADOLESCENTIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE CHORISMATE MUTASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BIFIDOBACTERIUM ADOLESCENTIS; SOURCE 3 ORGANISM_TAXID: 367928; SOURCE 4 STRAIN: ATCC 15703; SOURCE 5 GENE: BAD_1067, PHEA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG19 KEYWDS STRUCTURAL GENOMICS, APC38059, CHORISMATE, MUTASE, 3-PHENYLPYRUVATE, KEYWDS 2 PSI-2, PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS, MCSG, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.OSIPIUK,L.BIGELOW,J.BEARDEN,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 3 08-NOV-17 3LUY 1 REMARK REVDAT 2 13-JUL-11 3LUY 1 VERSN REVDAT 1 09-MAR-10 3LUY 0 JRNL AUTH J.OSIPIUK,L.BIGELOW,J.BEARDEN,A.JOACHIMIAK JRNL TITL X-RAY CRYSTAL STRUCTURE OF PUTATIVE CHORISMATE MUTASE FROM JRNL TITL 2 BIFIDOBACTERIUM ADOLESCENTIS. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 25902 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1317 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1739 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.97 REMARK 3 BIN R VALUE (WORKING SET) : 0.2710 REMARK 3 BIN FREE R VALUE SET COUNT : 95 REMARK 3 BIN FREE R VALUE : 0.3230 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2526 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 12 REMARK 3 SOLVENT ATOMS : 138 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 47.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.16000 REMARK 3 B22 (A**2) : 1.78000 REMARK 3 B33 (A**2) : 0.38000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.178 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.154 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.126 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.792 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.953 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2728 ; 0.021 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1828 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3750 ; 1.658 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4450 ; 0.966 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 358 ; 6.080 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 137 ;34.632 ;23.723 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 419 ;15.846 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;23.104 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 410 ; 0.107 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3145 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 579 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1679 ; 1.057 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 670 ; 0.283 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2719 ; 1.851 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1049 ; 2.748 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1014 ; 4.233 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 326 REMARK 3 RESIDUE RANGE : A 501 A 501 REMARK 3 RESIDUE RANGE : A 327 A 464 REMARK 3 ORIGIN FOR THE GROUP (A): 90.0263 0.7151 4.9094 REMARK 3 T TENSOR REMARK 3 T11: 0.0143 T22: 0.0557 REMARK 3 T33: 0.0791 T12: -0.0039 REMARK 3 T13: 0.0086 T23: 0.0024 REMARK 3 L TENSOR REMARK 3 L11: 0.9469 L22: 0.6285 REMARK 3 L33: 1.6770 L12: 0.1415 REMARK 3 L13: -0.0766 L23: 0.5531 REMARK 3 S TENSOR REMARK 3 S11: -0.0453 S12: 0.1205 S13: -0.0771 REMARK 3 S21: -0.0783 S22: 0.0479 S23: 0.0262 REMARK 3 S31: -0.0679 S32: -0.1724 S33: -0.0025 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 3LUY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-FEB-10. REMARK 100 THE DEPOSITION ID IS D_1000057762. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-FEB-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25950 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 39.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.82200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.090 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, MLPHARE, DM, SOLVE, RESOLVE, HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M POTASSIUM CHLORIDE, 0.05 M HEPES REMARK 280 BUFFER, 35% PENTAERYTHRITOL PROPOXYLATE (5/4 PO/OH), PH 7.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 49.97700 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.59900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 49.97700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.59900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 199.90800 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG A 286 O HOH A 337 2.07 REMARK 500 NH2 ARG A 262 O HOH A 397 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 74 CB - CG - OD1 ANGL. DEV. = 6.6 DEGREES REMARK 500 ASP A 265 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 61 -60.60 -121.06 REMARK 500 ASP A 81 66.68 -156.38 REMARK 500 ALA A 199 64.07 35.61 REMARK 500 GLU A 202 41.61 -91.21 REMARK 500 LEU A 212 51.91 -97.96 REMARK 500 LYS A 242 47.02 73.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PPY A 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC38059 RELATED DB: TARGETDB DBREF 3LUY A 2 326 UNP A1A2B5 A1A2B5_BIFAA 2 326 SEQADV 3LUY SER A -2 UNP A1A2B5 EXPRESSION TAG SEQADV 3LUY ASN A -1 UNP A1A2B5 EXPRESSION TAG SEQADV 3LUY ALA A 0 UNP A1A2B5 EXPRESSION TAG SEQADV 3LUY MSE A 1 UNP A1A2B5 EXPRESSION TAG SEQRES 1 A 329 SER ASN ALA MSE SER ALA ARG LYS LEU PHE TYR LEU GLY SEQRES 2 A 329 PRO GLN GLY THR PHE THR HIS GLN ALA ALA VAL ASN ALA SEQRES 3 A 329 ALA GLN GLU LEU ALA ARG PHE GLU PRO GLN GLY PHE ASP SEQRES 4 A 329 LEU MSE PRO MSE ASP ASP VAL PRO GLN ILE LEU ASP ALA SEQRES 5 A 329 ALA GLN HIS GLY ASP GLY TRP GLY ILE VAL ALA TRP GLU SEQRES 6 A 329 ASN ASN VAL GLU GLY TYR VAL VAL PRO ASN LEU ASP ALA SEQRES 7 A 329 LEU ILE ASP ALA LYS ASP LEU VAL GLY PHE ALA ARG VAL SEQRES 8 A 329 GLY VAL ASN VAL GLU PHE ASP ALA TYR VAL ALA GLN GLY SEQRES 9 A 329 ALA ASP PRO ALA GLU ALA ARG ILE ALA THR ALA HIS PRO SEQRES 10 A 329 HIS GLY LEU ALA GLN CYS LYS ARG PHE ILE ALA GLU HIS SEQRES 11 A 329 ARG LEU SER THR GLN PRO ALA THR SER ASN ALA ALA ALA SEQRES 12 A 329 CYS ARG ASP LEU ILE PRO GLY GLU ILE ALA PHE GLY PRO SEQRES 13 A 329 ALA ILE CYS GLY GLU LEU TYR ASP ILE THR ARG ILE GLY SEQRES 14 A 329 THR ALA ILE GLN ASP TYR GLN GLY ALA ALA THR ASP PHE SEQRES 15 A 329 LEU VAL LEU SER PRO ARG ALA GLU VAL ALA ARG LEU LEU SEQRES 16 A 329 ALA LYS PRO ARG ALA GLU ALA ASN VAL GLU TYR GLU SER SEQRES 17 A 329 VAL LEU THR LEU ILE PRO LEU VAL THR GLY PRO GLY VAL SEQRES 18 A 329 LEU ALA ASN LEU LEU ASP VAL PHE ARG ASP ALA GLY LEU SEQRES 19 A 329 ASN MSE THR SER PHE ILE SER ARG PRO ILE LYS GLY ARG SEQRES 20 A 329 THR GLY THR TYR SER PHE ILE VAL THR LEU ASP ALA ALA SEQRES 21 A 329 PRO TRP GLU GLU ARG PHE ARG ASP ALA LEU VAL GLU ILE SEQRES 22 A 329 ALA GLU HIS GLY ASP TRP ALA LYS THR LEU ALA VAL TYR SEQRES 23 A 329 PRO ARG ARG GLU HIS PRO ASN PRO PRO VAL THR SER TRP SEQRES 24 A 329 MSE LEU PRO GLN GLY GLY VAL ARG LEU ASP ASP SER HIS SEQRES 25 A 329 LEU PRO ASP ASP TRP GLN ASN ASP GLU THR VAL ARG ARG SEQRES 26 A 329 GLU LEU MSE TRP MODRES 3LUY MSE A 1 MET SELENOMETHIONINE MODRES 3LUY MSE A 38 MET SELENOMETHIONINE MODRES 3LUY MSE A 40 MET SELENOMETHIONINE MODRES 3LUY MSE A 233 MET SELENOMETHIONINE MODRES 3LUY MSE A 297 MET SELENOMETHIONINE MODRES 3LUY MSE A 325 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 38 8 HET MSE A 40 8 HET MSE A 233 8 HET MSE A 297 8 HET MSE A 325 8 HET PPY A 501 12 HETNAM MSE SELENOMETHIONINE HETNAM PPY 3-PHENYLPYRUVIC ACID FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 2 PPY C9 H8 O3 FORMUL 3 HOH *138(H2 O) HELIX 1 1 THR A 14 LEU A 27 1 14 HELIX 2 2 ALA A 28 GLU A 31 5 4 HELIX 3 3 ASP A 42 GLY A 53 1 12 HELIX 4 4 VAL A 69 ASP A 78 1 10 HELIX 5 5 ASP A 103 ALA A 107 5 5 HELIX 6 6 HIS A 113 CYS A 120 1 8 HELIX 7 7 CYS A 120 HIS A 127 1 8 HELIX 8 8 SER A 136 ASP A 143 1 8 HELIX 9 9 ILE A 155 TYR A 160 1 6 HELIX 10 10 PRO A 184 LEU A 192 1 9 HELIX 11 11 LEU A 192 GLU A 198 1 7 HELIX 12 12 GLY A 217 ALA A 229 1 13 HELIX 13 13 GLU A 260 HIS A 273 1 14 HELIX 14 14 PRO A 292 TRP A 296 5 5 HELIX 15 15 ASP A 313 ASN A 316 5 4 HELIX 16 16 ASP A 317 MSE A 325 1 9 SHEET 1 A 4 PHE A 35 MSE A 40 0 SHEET 2 A 4 ARG A 4 LEU A 9 1 N ARG A 4 O ASP A 36 SHEET 3 A 4 TRP A 56 ASN A 63 1 O TRP A 56 N PHE A 7 SHEET 4 A 4 GLY A 67 TYR A 68 -1 O GLY A 67 N ASN A 63 SHEET 1 B 5 PHE A 35 MSE A 40 0 SHEET 2 B 5 ARG A 4 LEU A 9 1 N ARG A 4 O ASP A 36 SHEET 3 B 5 TRP A 56 ASN A 63 1 O TRP A 56 N PHE A 7 SHEET 4 B 5 ALA A 176 SER A 183 -1 O ASP A 178 N GLU A 62 SHEET 5 B 5 VAL A 83 ASN A 91 -1 N PHE A 85 O VAL A 181 SHEET 1 C 5 SER A 130 PRO A 133 0 SHEET 2 C 5 ILE A 109 ALA A 112 1 N ALA A 110 O GLN A 132 SHEET 3 C 5 GLU A 148 GLY A 152 1 O ILE A 149 N ILE A 109 SHEET 4 C 5 ASP A 95 ALA A 99 -1 N ASP A 95 O GLY A 152 SHEET 5 C 5 ILE A 162 GLY A 166 -1 O THR A 163 N VAL A 98 SHEET 1 D 4 MSE A 233 ILE A 241 0 SHEET 2 D 4 ARG A 244 LEU A 254 -1 O THR A 253 N THR A 234 SHEET 3 D 4 TYR A 203 ILE A 210 -1 N LEU A 207 O VAL A 252 SHEET 4 D 4 TRP A 276 PRO A 284 -1 O TRP A 276 N ILE A 210 LINK C MSE A 1 N SER A 2 1555 1555 1.34 LINK C LEU A 37 N MSE A 38 1555 1555 1.34 LINK C MSE A 38 N PRO A 39 1555 1555 1.35 LINK C PRO A 39 N MSE A 40 1555 1555 1.33 LINK C MSE A 40 N ASP A 41 1555 1555 1.32 LINK C ASN A 232 N MSE A 233 1555 1555 1.32 LINK C MSE A 233 N THR A 234 1555 1555 1.33 LINK C TRP A 296 N MSE A 297 1555 1555 1.31 LINK C MSE A 297 N LEU A 298 1555 1555 1.32 LINK C LEU A 324 N MSE A 325 1555 1555 1.34 LINK C MSE A 325 N TRP A 326 1555 1555 1.33 CISPEP 1 GLY A 10 PRO A 11 0 5.47 SITE 1 AC1 13 GLY A 215 GLY A 217 VAL A 218 LEU A 219 SITE 2 AC1 13 ASN A 232 MSE A 233 THR A 234 SER A 235 SITE 3 AC1 13 TYR A 248 PHE A 250 HOH A 327 HOH A 403 SITE 4 AC1 13 HOH A 404 CRYST1 99.954 59.198 63.172 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010005 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016892 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015830 0.00000 HETATM 1 N MSE A 1 67.554 22.000 -3.512 1.00 56.44 N HETATM 2 CA MSE A 1 66.734 20.782 -3.797 1.00 57.42 C HETATM 3 C MSE A 1 67.512 19.664 -4.510 1.00 55.57 C HETATM 4 O MSE A 1 66.997 18.544 -4.655 1.00 56.11 O HETATM 5 CB MSE A 1 65.533 21.152 -4.671 1.00 58.64 C HETATM 6 CG MSE A 1 64.317 20.247 -4.457 1.00 64.40 C HETATM 7 SE MSE A 1 62.677 20.656 -5.538 1.00 81.22 SE HETATM 8 CE MSE A 1 62.644 22.664 -5.665 1.00 75.69 C