HEADER HYDROLASE 18-FEB-10 3LV0 TITLE CRYSTAL STRUCTURE OF EXTRAGENIC SUPPRESSOR PROTEIN SUHB FROM TITLE 2 BARTONELLA HENSELAE, NATIVE COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXTRAGENIC SUPPRESSOR PROTEIN SUHB; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BARTONELLA HENSELAE; SOURCE 3 ORGANISM_COMMON: ROCHALIMAEA HENSELAE; SOURCE 4 ORGANISM_TAXID: 38323; SOURCE 5 GENE: SUHB, BH15030; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: AVA0421 KEYWDS NIAID, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, KEYWDS 2 SSGCID, BARTONELLA, CAT SCRATCH DISEASE, ADVANCED LIGHT SOURCE, ALS KEYWDS 3 COLLABORATIVE CRYSTALLOGRAPHY, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 06-SEP-23 3LV0 1 REMARK SEQADV LINK REVDAT 1 02-MAR-10 3LV0 0 JRNL AUTH T.E.EDWARDS,J.ABENDROTH,B.SANKARAN, JRNL AUTH 2 SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE JRNL AUTH 3 (SSGCID) JRNL TITL CRYSTAL STRUCTURE OF EXTRAGENIC SUPPRESSOR PROTEIN SUHB FROM JRNL TITL 2 BARTONELLA HENSELAE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 62729 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3351 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4564 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.16 REMARK 3 BIN R VALUE (WORKING SET) : 0.2480 REMARK 3 BIN FREE R VALUE SET COUNT : 252 REMARK 3 BIN FREE R VALUE : 0.2560 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3953 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 301 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.43000 REMARK 3 B22 (A**2) : 0.99000 REMARK 3 B33 (A**2) : -0.57000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.112 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.109 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.068 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.965 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.940 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4159 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5625 ; 1.434 ; 1.951 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 548 ; 6.110 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 200 ;35.552 ;23.150 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 737 ;13.870 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 42 ;15.195 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 617 ; 0.103 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3189 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2590 ; 0.856 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4148 ; 1.575 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1569 ; 2.562 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1458 ; 4.365 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -10 A 9999 REMARK 3 ORIGIN FOR THE GROUP (A): 15.3253 24.5321 16.3556 REMARK 3 T TENSOR REMARK 3 T11: 0.0146 T22: 0.0340 REMARK 3 T33: 0.0222 T12: 0.0044 REMARK 3 T13: -0.0022 T23: -0.0170 REMARK 3 L TENSOR REMARK 3 L11: 1.5496 L22: 1.0280 REMARK 3 L33: 1.3603 L12: 0.4547 REMARK 3 L13: -0.0530 L23: -0.2205 REMARK 3 S TENSOR REMARK 3 S11: 0.0631 S12: 0.0441 S13: -0.0778 REMARK 3 S21: 0.0168 S22: -0.0088 S23: -0.0803 REMARK 3 S31: 0.0504 S32: 0.1950 S33: -0.0544 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -10 B 9999 REMARK 3 ORIGIN FOR THE GROUP (A): -13.4743 25.3705 16.9518 REMARK 3 T TENSOR REMARK 3 T11: 0.0100 T22: 0.0301 REMARK 3 T33: 0.0197 T12: -0.0112 REMARK 3 T13: -0.0030 T23: 0.0033 REMARK 3 L TENSOR REMARK 3 L11: 1.5118 L22: 0.9941 REMARK 3 L33: 1.5807 L12: -0.5764 REMARK 3 L13: -0.0406 L23: 0.5269 REMARK 3 S TENSOR REMARK 3 S11: 0.0428 S12: -0.0427 S13: -0.0793 REMARK 3 S21: -0.0212 S22: -0.0475 S23: 0.0764 REMARK 3 S31: 0.0721 S32: -0.2120 S33: 0.0047 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3LV0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-FEB-10. REMARK 100 THE DEPOSITION ID IS D_1000057764. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JAN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66080 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 70.610 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.900 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.5800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.55200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.4 REMARK 200 STARTING MODEL: 3LUZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 24 MG/ML PROTEIN AGAINST 0.2M MGCL2, REMARK 280 0.1 M TRIS PH 8.5, 30% PEG 400, CRYSTAL TRACKING ID 205526C1, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 41.03000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 69.30000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 41.03000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 69.30000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -40.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 GLN A 3 REMARK 465 GLY A 163 REMARK 465 ARG A 164 REMARK 465 GLY B -3 REMARK 465 PRO B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 PRO B 2 REMARK 465 GLN B 3 REMARK 465 GLU B 27 REMARK 465 VAL B 28 REMARK 465 GLN B 29 REMARK 465 ASN B 30 REMARK 465 GLY B 163 REMARK 465 ARG B 164 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 240 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 260 CG CD CE NZ REMARK 470 LYS B 59 CG CD CE NZ REMARK 470 LYS B 63 CG CD CE NZ REMARK 470 GLU B 77 CG CD OE1 OE2 REMARK 470 ARG B 240 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 242 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 89 OG1 THR A 189 1.97 REMARK 500 O HOH B 286 O HOH B 377 2.01 REMARK 500 OD2 ASP B 89 OG1 THR B 189 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 27 54.84 -142.32 REMARK 500 PRO A 99 24.06 -75.00 REMARK 500 HIS A 161 -157.31 -138.25 REMARK 500 ASP A 237 48.03 -98.56 REMARK 500 ASP B 237 45.06 -103.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 264 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 69 OE1 REMARK 620 2 ASP A 86 OD1 83.4 REMARK 620 3 LEU A 88 O 167.8 87.3 REMARK 620 4 HOH A 302 O 94.9 85.9 92.4 REMARK 620 5 HOH A 321 O 82.9 103.8 91.6 169.8 REMARK 620 6 HOH A 322 O 100.8 166.1 90.1 80.6 90.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 264 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 69 OE1 REMARK 620 2 ASP B 86 OD1 84.6 REMARK 620 3 LEU B 88 O 169.9 90.8 REMARK 620 4 HOH B 319 O 94.6 84.4 94.0 REMARK 620 5 HOH B 332 O 100.3 167.0 86.1 83.2 REMARK 620 6 HOH B 333 O 82.2 103.2 90.0 171.3 89.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 265 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 378 O REMARK 620 2 HOH B 379 O 78.1 REMARK 620 3 HOH B 380 O 88.9 101.7 REMARK 620 4 HOH B 381 O 82.8 103.3 151.4 REMARK 620 5 HOH B 382 O 153.8 77.1 87.9 111.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 264 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 264 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 265 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3LUZ RELATED DB: PDB REMARK 900 COMBINED IODIDE SAD/MOLECULAR REPLACEMENT PHASED, DIFFERENT SPACE REMARK 900 GROUP REMARK 900 RELATED ID: BAHEA.00759.A RELATED DB: TARGETDB DBREF 3LV0 A 1 263 UNP Q6G1Z6 Q6G1Z6_BARHE 1 263 DBREF 3LV0 B 1 263 UNP Q6G1Z6 Q6G1Z6_BARHE 1 263 SEQADV 3LV0 GLY A -3 UNP Q6G1Z6 EXPRESSION TAG SEQADV 3LV0 PRO A -2 UNP Q6G1Z6 EXPRESSION TAG SEQADV 3LV0 GLY A -1 UNP Q6G1Z6 EXPRESSION TAG SEQADV 3LV0 SER A 0 UNP Q6G1Z6 EXPRESSION TAG SEQADV 3LV0 GLY B -3 UNP Q6G1Z6 EXPRESSION TAG SEQADV 3LV0 PRO B -2 UNP Q6G1Z6 EXPRESSION TAG SEQADV 3LV0 GLY B -1 UNP Q6G1Z6 EXPRESSION TAG SEQADV 3LV0 SER B 0 UNP Q6G1Z6 EXPRESSION TAG SEQRES 1 A 267 GLY PRO GLY SER MET PRO GLN SER ALA VAL MET ASN VAL SEQRES 2 A 267 MET VAL GLN ALA ALA MET LYS ALA GLY ARG SER LEU VAL SEQRES 3 A 267 ARG ASP TYR GLY GLU VAL GLN ASN LEU GLN VAL SER LEU SEQRES 4 A 267 LYS GLY PRO ALA ASP TYR VAL SER GLN ALA ASP ARG LYS SEQRES 5 A 267 ALA GLU LYS ILE ILE PHE ASN GLU LEU SER LYS ALA ARG SEQRES 6 A 267 PRO LYS PHE GLY PHE LEU MET GLU GLU SER GLU GLU ILE SEQRES 7 A 267 ILE GLY GLU ASP SER GLN HIS ARG PHE ILE VAL ASP PRO SEQRES 8 A 267 LEU ASP GLY THR THR ASN PHE LEU HIS GLY ILE PRO PHE SEQRES 9 A 267 PHE ALA VAL SER ILE ALA LEU GLU SER GLN GLY LYS ILE SEQRES 10 A 267 VAL ALA GLY VAL ILE TYR ASN PRO ILE ASN ASP GLU LEU SEQRES 11 A 267 PHE THR ALA GLU ARG GLY SER GLY ALA PHE PHE ASN ASP SEQRES 12 A 267 ARG ARG CYS ARG VAL SER ALA ARG ARG ARG LEU GLU ASP SEQRES 13 A 267 CYS VAL ILE ALA THR GLY MET PRO HIS LEU GLY ARG PRO SEQRES 14 A 267 GLY HIS GLY THR TYR LEU ILE GLU LEU ARG ASN VAL MET SEQRES 15 A 267 ALA GLU VAL SER GLY ILE ARG ARG PHE GLY THR ALA ALA SEQRES 16 A 267 LEU ASP LEU ALA TYR VAL ALA ALA GLY ARG THR ASP GLY SEQRES 17 A 267 PHE TRP GLU ASP ASN LEU GLN ILE TRP ASP MET ALA ALA SEQRES 18 A 267 GLY ILE LEU MET VAL ARG GLU ALA GLY GLY PHE VAL THR SEQRES 19 A 267 ASP LYS GLU GLY GLY ASN ASP ILE PHE ARG LYS LYS ASN SEQRES 20 A 267 ILE ILE ALA GLY ASN GLU HIS ILE ARG ILE LYS LEU GLU SEQRES 21 A 267 ARG ALA LEU LYS LYS GLY ILE SEQRES 1 B 267 GLY PRO GLY SER MET PRO GLN SER ALA VAL MET ASN VAL SEQRES 2 B 267 MET VAL GLN ALA ALA MET LYS ALA GLY ARG SER LEU VAL SEQRES 3 B 267 ARG ASP TYR GLY GLU VAL GLN ASN LEU GLN VAL SER LEU SEQRES 4 B 267 LYS GLY PRO ALA ASP TYR VAL SER GLN ALA ASP ARG LYS SEQRES 5 B 267 ALA GLU LYS ILE ILE PHE ASN GLU LEU SER LYS ALA ARG SEQRES 6 B 267 PRO LYS PHE GLY PHE LEU MET GLU GLU SER GLU GLU ILE SEQRES 7 B 267 ILE GLY GLU ASP SER GLN HIS ARG PHE ILE VAL ASP PRO SEQRES 8 B 267 LEU ASP GLY THR THR ASN PHE LEU HIS GLY ILE PRO PHE SEQRES 9 B 267 PHE ALA VAL SER ILE ALA LEU GLU SER GLN GLY LYS ILE SEQRES 10 B 267 VAL ALA GLY VAL ILE TYR ASN PRO ILE ASN ASP GLU LEU SEQRES 11 B 267 PHE THR ALA GLU ARG GLY SER GLY ALA PHE PHE ASN ASP SEQRES 12 B 267 ARG ARG CYS ARG VAL SER ALA ARG ARG ARG LEU GLU ASP SEQRES 13 B 267 CYS VAL ILE ALA THR GLY MET PRO HIS LEU GLY ARG PRO SEQRES 14 B 267 GLY HIS GLY THR TYR LEU ILE GLU LEU ARG ASN VAL MET SEQRES 15 B 267 ALA GLU VAL SER GLY ILE ARG ARG PHE GLY THR ALA ALA SEQRES 16 B 267 LEU ASP LEU ALA TYR VAL ALA ALA GLY ARG THR ASP GLY SEQRES 17 B 267 PHE TRP GLU ASP ASN LEU GLN ILE TRP ASP MET ALA ALA SEQRES 18 B 267 GLY ILE LEU MET VAL ARG GLU ALA GLY GLY PHE VAL THR SEQRES 19 B 267 ASP LYS GLU GLY GLY ASN ASP ILE PHE ARG LYS LYS ASN SEQRES 20 B 267 ILE ILE ALA GLY ASN GLU HIS ILE ARG ILE LYS LEU GLU SEQRES 21 B 267 ARG ALA LEU LYS LYS GLY ILE HET MG A 264 1 HET MG B 264 1 HET MG B 265 1 HETNAM MG MAGNESIUM ION FORMUL 3 MG 3(MG 2+) FORMUL 6 HOH *301(H2 O) HELIX 1 1 SER A 4 GLY A 26 1 23 HELIX 2 2 GLU A 27 LEU A 31 5 5 HELIX 3 3 GLN A 44 ARG A 61 1 18 HELIX 4 4 GLY A 90 HIS A 96 1 7 HELIX 5 5 ARG A 149 ASP A 152 5 4 HELIX 6 6 GLY A 166 ALA A 179 1 14 HELIX 7 7 ALA A 190 ALA A 199 1 10 HELIX 8 8 GLN A 211 ALA A 225 1 15 HELIX 9 9 ASP A 237 LYS A 242 1 6 HELIX 10 10 ASN A 248 LYS A 261 1 14 HELIX 11 11 SER B 4 GLY B 26 1 23 HELIX 12 12 SER B 43 ARG B 61 1 19 HELIX 13 13 GLY B 90 GLY B 97 1 8 HELIX 14 14 ARG B 149 ASP B 152 5 4 HELIX 15 15 GLY B 166 ALA B 179 1 14 HELIX 16 16 ALA B 190 ALA B 199 1 10 HELIX 17 17 GLN B 211 ALA B 225 1 15 HELIX 18 18 ASP B 237 LYS B 242 1 6 HELIX 19 19 ASN B 248 LYS B 261 1 14 SHEET 1 A 2 VAL A 33 GLY A 37 0 SHEET 2 A 2 ASP A 40 SER A 43 -1 O ASP A 40 N LYS A 36 SHEET 1 B 7 GLY A 65 MET A 68 0 SHEET 2 B 7 HIS A 81 ASP A 89 1 O PHE A 83 N LEU A 67 SHEET 3 B 7 ALA A 102 SER A 109 -1 O ALA A 102 N ASP A 89 SHEET 4 B 7 LYS A 112 ASN A 120 -1 O VAL A 114 N LEU A 107 SHEET 5 B 7 GLU A 125 GLU A 130 -1 O PHE A 127 N ILE A 118 SHEET 6 B 7 GLY A 134 PHE A 137 -1 O PHE A 136 N THR A 128 SHEET 7 B 7 ARG A 140 ARG A 141 -1 O ARG A 140 N PHE A 137 SHEET 1 C 5 GLY A 183 ARG A 185 0 SHEET 2 C 5 VAL A 154 THR A 157 1 N ILE A 155 O GLY A 183 SHEET 3 C 5 GLY A 204 GLU A 207 1 O GLY A 204 N ALA A 156 SHEET 4 C 5 ILE A 244 GLY A 247 -1 O ALA A 246 N PHE A 205 SHEET 5 C 5 PHE A 228 THR A 230 -1 N PHE A 228 O GLY A 247 SHEET 1 D 2 SER B 34 GLY B 37 0 SHEET 2 D 2 ASP B 40 VAL B 42 -1 O ASP B 40 N LYS B 36 SHEET 1 E 8 SER B 71 ILE B 74 0 SHEET 2 E 8 GLY B 65 MET B 68 -1 N PHE B 66 O ILE B 74 SHEET 3 E 8 HIS B 81 ASP B 89 1 O PHE B 83 N LEU B 67 SHEET 4 E 8 ALA B 102 SER B 109 -1 O ALA B 102 N ASP B 89 SHEET 5 E 8 LYS B 112 ASN B 120 -1 O LYS B 112 N SER B 109 SHEET 6 E 8 GLU B 125 GLU B 130 -1 O PHE B 127 N ILE B 118 SHEET 7 E 8 GLY B 134 PHE B 137 -1 O PHE B 136 N THR B 128 SHEET 8 E 8 ARG B 140 CYS B 142 -1 O ARG B 140 N PHE B 137 SHEET 1 F 5 GLY B 183 ARG B 185 0 SHEET 2 F 5 VAL B 154 THR B 157 1 N ILE B 155 O GLY B 183 SHEET 3 F 5 GLY B 204 GLU B 207 1 O GLY B 204 N ALA B 156 SHEET 4 F 5 ILE B 244 GLY B 247 -1 O ALA B 246 N PHE B 205 SHEET 5 F 5 PHE B 228 THR B 230 -1 N PHE B 228 O GLY B 247 LINK OE1 GLU A 69 MG MG A 264 1555 1555 2.00 LINK OD1 ASP A 86 MG MG A 264 1555 1555 2.11 LINK O LEU A 88 MG MG A 264 1555 1555 2.02 LINK MG MG A 264 O HOH A 302 1555 1555 2.19 LINK MG MG A 264 O HOH A 321 1555 1555 2.04 LINK MG MG A 264 O HOH A 322 1555 1555 2.07 LINK OE1 GLU B 69 MG MG B 264 1555 1555 1.99 LINK OD1 ASP B 86 MG MG B 264 1555 1555 2.10 LINK O LEU B 88 MG MG B 264 1555 1555 2.08 LINK MG MG B 264 O HOH B 319 1555 1555 2.23 LINK MG MG B 264 O HOH B 332 1555 1555 2.24 LINK MG MG B 264 O HOH B 333 1555 1555 2.07 LINK MG MG B 265 O HOH B 378 1555 1555 1.99 LINK MG MG B 265 O HOH B 379 1555 1555 1.97 LINK MG MG B 265 O HOH B 380 1555 1555 1.93 LINK MG MG B 265 O HOH B 381 1555 1555 2.01 LINK MG MG B 265 O HOH B 382 1555 1555 2.01 SITE 1 AC1 6 GLU A 69 ASP A 86 LEU A 88 HOH A 302 SITE 2 AC1 6 HOH A 321 HOH A 322 SITE 1 AC2 6 GLU B 69 ASP B 86 LEU B 88 HOH B 319 SITE 2 AC2 6 HOH B 332 HOH B 333 SITE 1 AC3 6 GLU B 69 HOH B 378 HOH B 379 HOH B 380 SITE 2 AC3 6 HOH B 381 HOH B 382 CRYST1 82.060 138.600 67.240 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012186 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007215 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014872 0.00000