HEADER TRANSFERASE 22-FEB-10 3LVK TITLE CRYSTAL STRUCTURE OF E.COLI ISCS-TUSA COMPLEX (FORM 2) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYSTEINE DESULFURASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.8.1.7; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: SULFURTRANSFERASE TUSA; COMPND 8 CHAIN: B; COMPND 9 EC: 2.8.1.-; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 155864; SOURCE 4 STRAIN: O157:H7 EDL933; SOURCE 5 GENE: ISCS; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 13 ORGANISM_TAXID: 155864; SOURCE 14 STRAIN: O157:H7 EDL933; SOURCE 15 GENE: TUSA; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PGEX-4T1 KEYWDS PROTEIN-PROTEIN COMPLEX, STRUCTURAL GENOMICS, MONTREAL-KINGSTON KEYWDS 2 BACTERIAL STRUCTURAL GENOMICS INITIATIVE, BSGI, TRANSFERASE, TRNA KEYWDS 3 THIOLATION, SULFUR TRANSFER EXPDTA X-RAY DIFFRACTION AUTHOR R.SHI,A.PROTEAU,A.MATTE,M.CYGLER,MONTREAL-KINGSTON BACTERIAL AUTHOR 2 STRUCTURAL GENOMICS INITIATIVE (BSGI) REVDAT 4 06-SEP-23 3LVK 1 REMARK SEQADV LINK REVDAT 3 08-NOV-17 3LVK 1 REMARK REVDAT 2 05-MAY-10 3LVK 1 JRNL REVDAT 1 21-APR-10 3LVK 0 JRNL AUTH R.SHI,A.PROTEAU,M.VILLARROYA,I.MOUKADIRI,L.ZHANG,J.F.TREMPE, JRNL AUTH 2 A.MATTE,M.E.ARMENGOD,M.CYGLER JRNL TITL STRUCTURAL BASIS FOR FE-S CLUSTER ASSEMBLY AND TRNA JRNL TITL 2 THIOLATION MEDIATED BY ISCS PROTEIN-PROTEIN INTERACTIONS. JRNL REF PLOS BIOL. V. 8 00354 2010 JRNL REFN ISSN 1544-9173 JRNL PMID 20404999 JRNL DOI 10.1371/JOURNAL.PBIO.1000354 REMARK 2 REMARK 2 RESOLUTION. 2.44 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.6_289 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.44 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.35 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.3 REMARK 3 NUMBER OF REFLECTIONS : 17452 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 883 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.3540 - 4.4360 0.98 3141 147 0.1720 0.1900 REMARK 3 2 4.4360 - 3.5220 1.00 3081 151 0.1840 0.2450 REMARK 3 3 3.5220 - 3.0770 1.00 3042 168 0.2430 0.2640 REMARK 3 4 3.0770 - 2.7960 0.99 3002 154 0.2720 0.3140 REMARK 3 5 2.7960 - 2.5950 0.84 2525 143 0.2660 0.3260 REMARK 3 6 2.5950 - 2.4420 0.60 1778 120 0.2680 0.3240 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 62.10 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 82.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -12.63700 REMARK 3 B22 (A**2) : 27.95200 REMARK 3 B33 (A**2) : -15.31400 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3700 REMARK 3 ANGLE : 1.010 4997 REMARK 3 CHIRALITY : 0.073 556 REMARK 3 PLANARITY : 0.004 650 REMARK 3 DIHEDRAL : 19.615 1385 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 12:263) REMARK 3 ORIGIN FOR THE GROUP (A): 12.0429 -25.1733 21.4371 REMARK 3 T TENSOR REMARK 3 T11: 0.4254 T22: 0.5410 REMARK 3 T33: 0.4534 T12: -0.1686 REMARK 3 T13: -0.0645 T23: 0.1536 REMARK 3 L TENSOR REMARK 3 L11: 2.8818 L22: 2.0951 REMARK 3 L33: 4.3631 L12: -0.2616 REMARK 3 L13: 1.7225 L23: -0.0429 REMARK 3 S TENSOR REMARK 3 S11: -0.4749 S12: 0.6286 S13: 0.2350 REMARK 3 S21: -0.0896 S22: -0.0809 S23: -0.0859 REMARK 3 S31: -0.5365 S32: 1.0711 S33: 0.0002 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 1:11) OR (CHAIN A AND RESID REMARK 3 264:392) REMARK 3 ORIGIN FOR THE GROUP (A): 26.5029 -14.8963 45.4270 REMARK 3 T TENSOR REMARK 3 T11: 0.8951 T22: 0.7441 REMARK 3 T33: 0.6562 T12: -0.2820 REMARK 3 T13: -0.2919 T23: 0.1875 REMARK 3 L TENSOR REMARK 3 L11: 1.9214 L22: 2.2991 REMARK 3 L33: 1.5427 L12: 0.0243 REMARK 3 L13: 0.7089 L23: 0.5777 REMARK 3 S TENSOR REMARK 3 S11: -0.6707 S12: 0.0919 S13: 0.4193 REMARK 3 S21: 0.0819 S22: 0.1523 S23: 0.2136 REMARK 3 S31: -0.7005 S32: 0.6823 S33: -0.0002 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN B AND RESID 4:79) REMARK 3 ORIGIN FOR THE GROUP (A): 2.3603 -16.8735 -5.6226 REMARK 3 T TENSOR REMARK 3 T11: 1.0334 T22: 1.5034 REMARK 3 T33: 0.8076 T12: -0.2643 REMARK 3 T13: -0.3479 T23: 0.3112 REMARK 3 L TENSOR REMARK 3 L11: 0.3859 L22: 0.3281 REMARK 3 L33: 0.4732 L12: -0.2161 REMARK 3 L13: -0.2964 L23: 0.4066 REMARK 3 S TENSOR REMARK 3 S11: -0.5288 S12: 1.5312 S13: 0.2198 REMARK 3 S21: -0.2692 S22: -0.0307 S23: 0.0268 REMARK 3 S31: -1.5240 S32: 0.5516 S33: -0.0002 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3LVK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-MAR-10. REMARK 100 THE DEPOSITION ID IS D_1000057783. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-OCT-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17507 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.442 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.3 REMARK 200 DATA REDUNDANCY : 7.800 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.44 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 58.3 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : 0.38500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1P3W AND 1DCJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.12M MAGNISUM FORMATE, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.20550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.20550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 36.44650 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 65.70350 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 36.44650 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 65.70350 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 53.20550 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 36.44650 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 65.70350 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 53.20550 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 36.44650 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 65.70350 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -53.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 53.20550 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -18 REMARK 465 GLY A -17 REMARK 465 SER A -16 REMARK 465 SER A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 GLY A -8 REMARK 465 SER A -7 REMARK 465 MET A -6 REMARK 465 TYR A -5 REMARK 465 GLY A -4 REMARK 465 VAL A -3 REMARK 465 TYR A -2 REMARK 465 ARG A -1 REMARK 465 ALA A 0 REMARK 465 THR A 329 REMARK 465 SER A 330 REMARK 465 ALA A 331 REMARK 465 SER A 332 REMARK 465 GLY A 393 REMARK 465 VAL A 394 REMARK 465 ASP A 395 REMARK 465 LEU A 396 REMARK 465 ASN A 397 REMARK 465 SER A 398 REMARK 465 ILE A 399 REMARK 465 GLU A 400 REMARK 465 TRP A 401 REMARK 465 ALA A 402 REMARK 465 HIS A 403 REMARK 465 HIS A 404 REMARK 465 GLY B 0 REMARK 465 SER B 1 REMARK 465 THR B 2 REMARK 465 ASP B 3 REMARK 465 GLY B 80 REMARK 465 GLY B 81 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 2 CG CD CE NZ REMARK 470 GLU A 311 CG CD OE1 OE2 REMARK 470 LEU B 4 CG CD1 CD2 REMARK 470 GLU B 62 CG CD OE1 OE2 REMARK 470 ARG B 78 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 79 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 335 C - N - CD ANGL. DEV. = -17.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 9 -17.30 -49.47 REMARK 500 MET A 27 -64.69 -126.95 REMARK 500 PRO A 36 4.37 -64.55 REMARK 500 LYS A 187 -56.94 -125.54 REMARK 500 LYS A 196 51.28 -91.84 REMARK 500 GLU A 261 -73.09 -56.36 REMARK 500 GLU A 285 -73.03 -54.49 REMARK 500 GLU A 286 60.00 -103.23 REMARK 500 HIS A 295 55.12 -111.87 REMARK 500 LEU A 317 40.66 -106.01 REMARK 500 SER A 336 120.08 -35.42 REMARK 500 SER A 351 44.23 -101.93 REMARK 500 PHE B 5 54.03 -113.20 REMARK 500 SER B 7 57.85 -109.90 REMARK 500 CYS B 19 132.12 -35.27 REMARK 500 PRO B 35 106.41 -51.97 REMARK 500 GLU B 60 63.86 60.51 REMARK 500 VAL B 64 -79.03 -82.49 REMARK 500 THR B 68 -12.68 -148.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 334 PRO A 335 -142.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLP A 764 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3LVJ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF E.COLI ISCS-TUSA COMPLEX (FORM 1) REMARK 900 RELATED ID: 3LVL RELATED DB: PDB REMARK 900 RELATED ID: 3LVM RELATED DB: PDB REMARK 900 RELATED ID: ISCS_ECO57 RELATED DB: TARGETDB REMARK 900 RELATED ID: TUSA_ECO57 RELATED DB: TARGETDB DBREF 3LVK A 1 404 UNP P0A6B9 ISCS_ECO57 1 404 DBREF 3LVK B 2 81 UNP P0A892 TUSA_ECO57 2 81 SEQADV 3LVK MET A -18 UNP P0A6B9 EXPRESSION TAG SEQADV 3LVK GLY A -17 UNP P0A6B9 EXPRESSION TAG SEQADV 3LVK SER A -16 UNP P0A6B9 EXPRESSION TAG SEQADV 3LVK SER A -15 UNP P0A6B9 EXPRESSION TAG SEQADV 3LVK HIS A -14 UNP P0A6B9 EXPRESSION TAG SEQADV 3LVK HIS A -13 UNP P0A6B9 EXPRESSION TAG SEQADV 3LVK HIS A -12 UNP P0A6B9 EXPRESSION TAG SEQADV 3LVK HIS A -11 UNP P0A6B9 EXPRESSION TAG SEQADV 3LVK HIS A -10 UNP P0A6B9 EXPRESSION TAG SEQADV 3LVK HIS A -9 UNP P0A6B9 EXPRESSION TAG SEQADV 3LVK GLY A -8 UNP P0A6B9 EXPRESSION TAG SEQADV 3LVK SER A -7 UNP P0A6B9 EXPRESSION TAG SEQADV 3LVK MET A -6 UNP P0A6B9 EXPRESSION TAG SEQADV 3LVK TYR A -5 UNP P0A6B9 EXPRESSION TAG SEQADV 3LVK GLY A -4 UNP P0A6B9 EXPRESSION TAG SEQADV 3LVK VAL A -3 UNP P0A6B9 EXPRESSION TAG SEQADV 3LVK TYR A -2 UNP P0A6B9 EXPRESSION TAG SEQADV 3LVK ARG A -1 UNP P0A6B9 EXPRESSION TAG SEQADV 3LVK ALA A 0 UNP P0A6B9 EXPRESSION TAG SEQADV 3LVK GLY B 0 UNP P0A892 EXPRESSION TAG SEQADV 3LVK SER B 1 UNP P0A892 EXPRESSION TAG SEQRES 1 A 423 MET GLY SER SER HIS HIS HIS HIS HIS HIS GLY SER MET SEQRES 2 A 423 TYR GLY VAL TYR ARG ALA MET LYS LEU PRO ILE TYR LEU SEQRES 3 A 423 ASP TYR SER ALA THR THR PRO VAL ASP PRO ARG VAL ALA SEQRES 4 A 423 GLU LYS MET MET GLN PHE MET THR MET ASP GLY THR PHE SEQRES 5 A 423 GLY ASN PRO ALA SER ARG SER HIS ARG PHE GLY TRP GLN SEQRES 6 A 423 ALA GLU GLU ALA VAL ASP ILE ALA ARG ASN GLN ILE ALA SEQRES 7 A 423 ASP LEU VAL GLY ALA ASP PRO ARG GLU ILE VAL PHE THR SEQRES 8 A 423 SER GLY ALA THR GLU SER ASP ASN LEU ALA ILE LYS GLY SEQRES 9 A 423 ALA ALA ASN PHE TYR GLN LYS LYS GLY LYS HIS ILE ILE SEQRES 10 A 423 THR SER LYS THR GLU HIS LYS ALA VAL LEU ASP THR CYS SEQRES 11 A 423 ARG GLN LEU GLU ARG GLU GLY PHE GLU VAL THR TYR LEU SEQRES 12 A 423 ALA PRO GLN ARG ASN GLY ILE ILE ASP LEU LYS GLU LEU SEQRES 13 A 423 GLU ALA ALA MET ARG ASP ASP THR ILE LEU VAL SER ILE SEQRES 14 A 423 MET HIS VAL ASN ASN GLU ILE GLY VAL VAL GLN ASP ILE SEQRES 15 A 423 ALA ALA ILE GLY GLU MET CYS ARG ALA ARG GLY ILE ILE SEQRES 16 A 423 TYR HIS VAL ASP ALA THR GLN SER VAL GLY LYS LEU PRO SEQRES 17 A 423 ILE ASP LEU SER GLN LEU LYS VAL ASP LEU MET SER PHE SEQRES 18 A 423 SER GLY HIS LYS ILE TYR GLY PRO LYS GLY ILE GLY ALA SEQRES 19 A 423 LEU TYR VAL ARG ARG LYS PRO ARG VAL ARG ILE GLU ALA SEQRES 20 A 423 GLN MET HIS GLY GLY GLY HIS GLU ARG GLY MET ARG SER SEQRES 21 A 423 GLY THR LEU PRO VAL HIS GLN ILE VAL GLY MET GLY GLU SEQRES 22 A 423 ALA TYR ARG ILE ALA LYS GLU GLU MET ALA THR GLU MET SEQRES 23 A 423 GLU ARG LEU ARG GLY LEU ARG ASN ARG LEU TRP ASN GLY SEQRES 24 A 423 ILE LYS ASP ILE GLU GLU VAL TYR LEU ASN GLY ASP LEU SEQRES 25 A 423 GLU HIS GLY ALA PRO ASN ILE LEU ASN VAL SER PHE ASN SEQRES 26 A 423 TYR VAL GLU GLY GLU SER LEU ILE MET ALA LEU LYS ASP SEQRES 27 A 423 LEU ALA VAL SER SER GLY SER ALA CYS THR SER ALA SER SEQRES 28 A 423 LEU GLU PRO SER TYR VAL LEU ARG ALA LEU GLY LEU ASN SEQRES 29 A 423 ASP GLU LEU ALA HIS SER SER ILE ARG PHE SER LEU GLY SEQRES 30 A 423 ARG PHE THR THR GLU GLU GLU ILE ASP TYR THR ILE GLU SEQRES 31 A 423 LEU VAL ARG LYS SER ILE GLY ARG LEU ARG ASP LEU SER SEQRES 32 A 423 PRO LEU TRP GLU MET TYR LYS GLN GLY VAL ASP LEU ASN SEQRES 33 A 423 SER ILE GLU TRP ALA HIS HIS SEQRES 1 B 82 GLY SER THR ASP LEU PHE SER SER PRO ASP HIS THR LEU SEQRES 2 B 82 ASP ALA LEU GLY LEU ARG CYS PRO GLU PRO VAL MET MET SEQRES 3 B 82 VAL ARG LYS THR VAL ARG ASN MET GLN PRO GLY GLU THR SEQRES 4 B 82 LEU LEU ILE ILE ALA ASP ASP PRO ALA THR THR ARG ASP SEQRES 5 B 82 ILE PRO GLY PHE CYS THR PHE MET GLU HIS GLU LEU VAL SEQRES 6 B 82 ALA LYS GLU THR ASP GLY LEU PRO TYR ARG TYR LEU ILE SEQRES 7 B 82 ARG LYS GLY GLY HET PLP A 764 15 HETNAM PLP PYRIDOXAL-5'-PHOSPHATE HETSYN PLP VITAMIN B6 PHOSPHATE FORMUL 3 PLP C8 H10 N O6 P FORMUL 4 HOH *46(H2 O) HELIX 1 1 ASP A 16 MET A 23 1 8 HELIX 2 2 HIS A 41 VAL A 62 1 22 HELIX 3 3 ASP A 65 ARG A 67 5 3 HELIX 4 4 GLY A 74 TYR A 90 1 17 HELIX 5 5 GLN A 91 GLY A 94 5 4 HELIX 6 6 HIS A 104 GLY A 118 1 15 HELIX 7 7 ASP A 133 MET A 141 1 9 HELIX 8 8 ASP A 162 ALA A 172 1 11 HELIX 9 9 GLY A 234 MET A 239 1 6 HELIX 10 10 PRO A 245 GLY A 280 1 36 HELIX 11 11 GLU A 309 LEU A 317 1 9 HELIX 12 12 SER A 336 GLY A 343 1 8 HELIX 13 13 ASN A 345 SER A 351 1 7 HELIX 14 14 THR A 362 LEU A 383 1 22 HELIX 15 15 SER A 384 LYS A 391 1 8 HELIX 16 16 PRO B 20 ASN B 32 1 13 HELIX 17 17 ALA B 47 MET B 59 1 13 SHEET 1 A 2 ILE A 5 TYR A 6 0 SHEET 2 A 2 LEU A 320 ALA A 321 1 O ALA A 321 N ILE A 5 SHEET 1 B 7 ILE A 69 THR A 72 0 SHEET 2 B 7 GLY A 214 VAL A 218 -1 O GLY A 214 N THR A 72 SHEET 3 B 7 LEU A 199 SER A 203 -1 N MET A 200 O TYR A 217 SHEET 4 B 7 ILE A 176 ASP A 180 1 N VAL A 179 O LEU A 199 SHEET 5 B 7 THR A 145 SER A 149 1 N VAL A 148 O HIS A 178 SHEET 6 B 7 HIS A 96 SER A 100 1 N HIS A 96 O ILE A 146 SHEET 7 B 7 GLU A 120 LEU A 124 1 O GLU A 120 N ILE A 97 SHEET 1 C 3 VAL A 287 ASN A 290 0 SHEET 2 C 3 ILE A 300 PHE A 305 -1 O ASN A 302 N ASN A 290 SHEET 3 C 3 SER A 352 SER A 356 -1 O PHE A 355 N LEU A 301 SHEET 1 D 4 HIS B 10 ALA B 14 0 SHEET 2 D 4 THR B 38 ALA B 43 1 O ILE B 42 N ALA B 14 SHEET 3 D 4 TYR B 73 ARG B 78 -1 O TYR B 75 N ILE B 41 SHEET 4 D 4 GLU B 62 LYS B 66 -1 N GLU B 62 O ARG B 78 LINK NZ LYS A 206 C4A PLP A 764 1555 1555 1.72 CISPEP 1 LEU A 3 PRO A 4 0 4.36 CISPEP 2 LYS A 221 PRO A 222 0 -4.77 CISPEP 3 CYS B 19 PRO B 20 0 7.98 CISPEP 4 LEU B 71 PRO B 72 0 -3.73 SITE 1 AC1 14 GLY A 74 ALA A 75 THR A 76 HIS A 104 SITE 2 AC1 14 MET A 151 ASN A 155 ASP A 180 THR A 182 SITE 3 AC1 14 GLN A 183 SER A 203 HIS A 205 LYS A 206 SITE 4 AC1 14 THR A 243 HOH A 441 CRYST1 72.893 131.407 106.411 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013719 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007610 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009398 0.00000