data_3LWI # _entry.id 3LWI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3LWI pdb_00003lwi 10.2210/pdb3lwi/pdb NDB NA0460 ? ? RCSB RCSB057817 ? ? WWPDB D_1000057817 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3LWH _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3LWI _pdbx_database_status.recvd_initial_deposition_date 2010-02-23 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhang, Z.F.' 1 'Gong, Y.' 2 'Guo, L.' 3 'Jiang, T.' 4 'Huang, L.' 5 # _citation.id primary _citation.title 'Structural insights into the interaction of the crenarchaeal chromatin protein Cren7 with DNA' _citation.journal_abbrev Mol.Microbiol. _citation.journal_volume 76 _citation.page_first 749 _citation.page_last 759 _citation.year 2010 _citation.journal_id_ASTM MOMIEE _citation.country UK _citation.journal_id_ISSN 0950-382X _citation.journal_id_CSD 2007 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20345658 _citation.pdbx_database_id_DOI 10.1111/j.1365-2958.2010.07136.x # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhang, Z.F.' 1 ? primary 'Gong, Y.' 2 ? primary 'Guo, L.' 3 ? primary 'Jiang, T.' 4 ? primary 'Huang, L.' 5 ? # _cell.entry_id 3LWI _cell.length_a 77.443 _cell.length_b 77.232 _cell.length_c 105.020 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3LWI _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Chromatin protein Cren7' 6677.914 2 ? ? ? ? 2 polymer syn ;DNA (5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3') ; 2427.605 4 ? ? ? ? 3 water nat water 18.015 115 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no MSSGKKPVKVKTPAGKEAELVPEKVWALAPKGRKGVKIGLFKDPETGKYFRHKLPDDYPI MSSGKKPVKVKTPAGKEAELVPEKVWALAPKGRKGVKIGLFKDPETGKYFRHKLPDDYPI A,B ? 2 polydeoxyribonucleotide no no '(DG)(DC)(DG)(DA)(DT)(DC)(DG)(DC)' GCGATCGC C,D,E,F ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 LYS n 1 6 LYS n 1 7 PRO n 1 8 VAL n 1 9 LYS n 1 10 VAL n 1 11 LYS n 1 12 THR n 1 13 PRO n 1 14 ALA n 1 15 GLY n 1 16 LYS n 1 17 GLU n 1 18 ALA n 1 19 GLU n 1 20 LEU n 1 21 VAL n 1 22 PRO n 1 23 GLU n 1 24 LYS n 1 25 VAL n 1 26 TRP n 1 27 ALA n 1 28 LEU n 1 29 ALA n 1 30 PRO n 1 31 LYS n 1 32 GLY n 1 33 ARG n 1 34 LYS n 1 35 GLY n 1 36 VAL n 1 37 LYS n 1 38 ILE n 1 39 GLY n 1 40 LEU n 1 41 PHE n 1 42 LYS n 1 43 ASP n 1 44 PRO n 1 45 GLU n 1 46 THR n 1 47 GLY n 1 48 LYS n 1 49 TYR n 1 50 PHE n 1 51 ARG n 1 52 HIS n 1 53 LYS n 1 54 LEU n 1 55 PRO n 1 56 ASP n 1 57 ASP n 1 58 TYR n 1 59 PRO n 1 60 ILE n 2 1 DG n 2 2 DC n 2 3 DG n 2 4 DA n 2 5 DT n 2 6 DC n 2 7 DG n 2 8 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'creN7, SSO6901' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain P2 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Sulfolobus solfataricus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 273057 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Rosetta 2 (DE3) plysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET30a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP CREN7_SULSO Q97ZE3 1 MSSGKKPVKVKTPAGKEAELVPEKVWALAPKGRKGVKIGLFKDPETGKYFRHKLPDDYPI 1 ? 2 PDB 3LWI 3LWI 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3LWI A 1 ? 60 ? Q97ZE3 1 ? 60 ? 1 60 2 1 3LWI B 1 ? 60 ? Q97ZE3 1 ? 60 ? 1 60 3 2 3LWI C 1 ? 8 ? 3LWI 101 ? 108 ? 101 108 4 2 3LWI D 1 ? 8 ? 3LWI 109 ? 116 ? 109 116 5 2 3LWI E 1 ? 8 ? 3LWI 101 ? 108 ? 101 108 6 2 3LWI F 1 ? 8 ? 3LWI 109 ? 116 ? 109 116 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3LWI _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.40 _exptl_crystal.density_percent_sol 63.87 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp 293.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.8 _exptl_crystal_grow.pdbx_details '30% PEG1500, pH 6.8, VAPOR DIFFUSION, temperature 293.0K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2009-11-28 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97947 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRF BEAMLINE BL17U' _diffrn_source.pdbx_synchrotron_site SSRF _diffrn_source.pdbx_synchrotron_beamline BL17U _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97947 # _reflns.entry_id 3LWI _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 30 _reflns.d_resolution_high 2.3 _reflns.number_obs 15270 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.065 _reflns.pdbx_Rsym_value 0.052 _reflns.pdbx_netI_over_sigmaI 39.6 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 8.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.38 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.46 _reflns_shell.pdbx_Rsym_value 0.32 _reflns_shell.meanI_over_sigI_obs 4.8 _reflns_shell.pdbx_redundancy 8.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3LWI _refine.ls_number_reflns_obs 13592 _refine.ls_number_reflns_all 13592 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 99.94 _refine.ls_R_factor_obs 0.20489 _refine.ls_R_factor_all 0.20489 _refine.ls_R_factor_R_work 0.20335 _refine.ls_R_factor_R_free 0.23351 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 721 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.955 _refine.correlation_coeff_Fo_to_Fc_free 0.945 _refine.B_iso_mean 44.581 _refine.aniso_B[1][1] 1.98 _refine.aniso_B[2][2] 0.58 _refine.aniso_B[3][3] -2.56 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 2JTM' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.234 _refine.pdbx_overall_ESU_R_Free 0.192 _refine.overall_SU_ML 0.141 _refine.overall_SU_B 9.626 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 914 _refine_hist.pdbx_number_atoms_nucleic_acid 644 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 115 _refine_hist.number_atoms_total 1673 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 30 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.008 0.022 ? 1660 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.373 2.479 ? 2368 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.704 5.000 ? 114 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 21.356 23.333 ? 30 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 17.075 15.000 ? 182 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.028 15.000 ? 4 'X-RAY DIFFRACTION' ? r_chiral_restr 0.062 0.200 ? 254 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 1020 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.170 0.200 ? 530 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.302 0.200 ? 981 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.130 0.200 ? 124 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.171 0.200 ? 30 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.099 0.200 ? 6 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.728 1.500 ? 596 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.848 2.000 ? 942 'X-RAY DIFFRACTION' ? r_scbond_it 0.965 3.000 ? 1438 'X-RAY DIFFRACTION' ? r_scangle_it 1.411 4.500 ? 1426 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 1 A 228 0.04 0.05 'tight positional' 1 1 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 C 161 0.01 0.05 'tight positional' 2 2 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 D 161 0.01 0.05 'tight positional' 3 3 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 220 0.29 0.50 'medium positional' 1 4 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 228 0.02 0.50 'tight thermal' 1 5 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 C 161 0.04 0.50 'tight thermal' 2 6 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 D 161 0.04 0.50 'tight thermal' 3 7 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 220 0.13 2.00 'medium thermal' 1 8 'X-RAY DIFFRACTION' ? ? ? ? ? ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.300 _refine_ls_shell.d_res_low 2.359 _refine_ls_shell.number_reflns_R_work 980 _refine_ls_shell.R_factor_R_work 0.281 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.330 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 48 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _struct_ncs_dom.id _struct_ncs_dom.details _struct_ncs_dom.pdbx_ens_id 1 A 1 2 B 1 1 C 2 2 E 2 1 D 3 2 F 3 # loop_ _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.selection_details _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.end_auth_comp_id 1 A 1 A 8 1 2 ? ? ? ? ? ? ? ? 1 ? ? ? 2 B 1 B 8 1 2 ? ? ? ? ? ? ? ? 1 ? ? ? 1 A 10 A 60 2 2 ? ? ? ? ? ? ? ? 1 ? ? ? 2 B 10 B 60 2 2 ? ? ? ? ? ? ? ? 1 ? ? ? 1 C 101 C 108 1 1 ? ? ? ? ? ? ? ? 2 ? ? ? 2 E 101 E 108 1 1 ? ? ? ? ? ? ? ? 2 ? ? ? 1 D 109 D 116 1 1 ? ? ? ? ? ? ? ? 3 ? ? ? 2 F 109 F 116 1 1 ? ? ? ? ? ? ? ? 3 ? ? ? # loop_ _struct_ncs_ens.id _struct_ncs_ens.details 1 ? 2 ? 3 ? # _struct.entry_id 3LWI _struct.title 'Crystal structure of Cren7-dsDNA complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3LWI _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' _struct_keywords.text 'Protein-DNA complex, beta-sheet, DNA-binding, Methylation, DNA BINDING PROTEIN-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? C DG 1 N1 ? ? ? 1_555 D DC 8 N3 ? ? C DG 101 D DC 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DG 1 N2 ? ? ? 1_555 D DC 8 O2 ? ? C DG 101 D DC 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DG 1 O6 ? ? ? 1_555 D DC 8 N4 ? ? C DG 101 D DC 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DC 2 N3 ? ? ? 1_555 D DG 7 N1 ? ? C DC 102 D DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DC 2 N4 ? ? ? 1_555 D DG 7 O6 ? ? C DC 102 D DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DC 2 O2 ? ? ? 1_555 D DG 7 N2 ? ? C DC 102 D DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DG 3 N1 ? ? ? 1_555 D DC 6 N3 ? ? C DG 103 D DC 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DG 3 N2 ? ? ? 1_555 D DC 6 O2 ? ? C DG 103 D DC 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DG 3 O6 ? ? ? 1_555 D DC 6 N4 ? ? C DG 103 D DC 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DA 4 N1 ? ? ? 1_555 D DT 5 N3 ? ? C DA 104 D DT 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DA 4 N6 ? ? ? 1_555 D DT 5 O4 ? ? C DA 104 D DT 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DT 5 N3 ? ? ? 1_555 D DA 4 N1 ? ? C DT 105 D DA 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DT 5 O4 ? ? ? 1_555 D DA 4 N6 ? ? C DT 105 D DA 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DC 6 N3 ? ? ? 1_555 D DG 3 N1 ? ? C DC 106 D DG 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DC 6 N4 ? ? ? 1_555 D DG 3 O6 ? ? C DC 106 D DG 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DC 6 O2 ? ? ? 1_555 D DG 3 N2 ? ? C DC 106 D DG 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DG 7 N1 ? ? ? 1_555 D DC 2 N3 ? ? C DG 107 D DC 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DG 7 N2 ? ? ? 1_555 D DC 2 O2 ? ? C DG 107 D DC 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DG 7 O6 ? ? ? 1_555 D DC 2 N4 ? ? C DG 107 D DC 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DC 8 N3 ? ? ? 1_555 D DG 1 N1 ? ? C DC 108 D DG 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DC 8 N4 ? ? ? 1_555 D DG 1 O6 ? ? C DC 108 D DG 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DC 8 O2 ? ? ? 1_555 D DG 1 N2 ? ? C DC 108 D DG 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? E DG 1 N1 ? ? ? 1_555 F DC 8 N3 ? ? E DG 101 F DC 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? E DG 1 N2 ? ? ? 1_555 F DC 8 O2 ? ? E DG 101 F DC 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? E DG 1 O6 ? ? ? 1_555 F DC 8 N4 ? ? E DG 101 F DC 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? E DC 2 N3 ? ? ? 1_555 F DG 7 N1 ? ? E DC 102 F DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? E DC 2 N4 ? ? ? 1_555 F DG 7 O6 ? ? E DC 102 F DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? E DC 2 O2 ? ? ? 1_555 F DG 7 N2 ? ? E DC 102 F DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? E DG 3 N1 ? ? ? 1_555 F DC 6 N3 ? ? E DG 103 F DC 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? E DG 3 N2 ? ? ? 1_555 F DC 6 O2 ? ? E DG 103 F DC 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? E DG 3 O6 ? ? ? 1_555 F DC 6 N4 ? ? E DG 103 F DC 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? E DA 4 N1 ? ? ? 1_555 F DT 5 N3 ? ? E DA 104 F DT 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? E DA 4 N6 ? ? ? 1_555 F DT 5 O4 ? ? E DA 104 F DT 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? E DT 5 N3 ? ? ? 1_555 F DA 4 N1 ? ? E DT 105 F DA 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? E DT 5 O4 ? ? ? 1_555 F DA 4 N6 ? ? E DT 105 F DA 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? E DC 6 N3 ? ? ? 1_555 F DG 3 N1 ? ? E DC 106 F DG 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? E DC 6 N4 ? ? ? 1_555 F DG 3 O6 ? ? E DC 106 F DG 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? E DC 6 O2 ? ? ? 1_555 F DG 3 N2 ? ? E DC 106 F DG 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? E DG 7 N1 ? ? ? 1_555 F DC 2 N3 ? ? E DG 107 F DC 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? E DG 7 N2 ? ? ? 1_555 F DC 2 O2 ? ? E DG 107 F DC 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? E DG 7 O6 ? ? ? 1_555 F DC 2 N4 ? ? E DG 107 F DC 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? E DC 8 N3 ? ? ? 1_555 F DG 1 N1 ? ? E DC 108 F DG 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? E DC 8 N4 ? ? ? 1_555 F DG 1 O6 ? ? E DC 108 F DG 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? E DC 8 O2 ? ? ? 1_555 F DG 1 N2 ? ? E DC 108 F DG 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 3 ? C ? 2 ? D ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 8 ? LYS A 11 ? VAL A 8 LYS A 11 A 2 GLU A 17 ? LEU A 20 ? GLU A 17 LEU A 20 B 1 LYS A 24 ? LEU A 28 ? LYS A 24 LEU A 28 B 2 VAL A 36 ? LYS A 42 ? VAL A 36 LYS A 42 B 3 TYR A 49 ? LYS A 53 ? TYR A 49 LYS A 53 C 1 VAL B 8 ? LYS B 11 ? VAL B 8 LYS B 11 C 2 GLU B 17 ? LEU B 20 ? GLU B 17 LEU B 20 D 1 LYS B 24 ? LEU B 28 ? LYS B 24 LEU B 28 D 2 VAL B 36 ? LYS B 42 ? VAL B 36 LYS B 42 D 3 TYR B 49 ? LYS B 53 ? TYR B 49 LYS B 53 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 10 ? N VAL A 10 O ALA A 18 ? O ALA A 18 B 1 2 N LEU A 28 ? N LEU A 28 O VAL A 36 ? O VAL A 36 B 2 3 N PHE A 41 ? N PHE A 41 O PHE A 50 ? O PHE A 50 C 1 2 N VAL B 10 ? N VAL B 10 O ALA B 18 ? O ALA B 18 D 1 2 N LEU B 28 ? N LEU B 28 O VAL B 36 ? O VAL B 36 D 2 3 N PHE B 41 ? N PHE B 41 O PHE B 50 ? O PHE B 50 # _database_PDB_matrix.entry_id 3LWI _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3LWI _atom_sites.fract_transf_matrix[1][1] 0.012913 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012948 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009522 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 SER 2 2 ? ? ? A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 LYS 5 5 5 LYS LYS A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 PRO 7 7 7 PRO PRO A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 VAL 21 21 21 VAL VAL A . n A 1 22 PRO 22 22 22 PRO PRO A . n A 1 23 GLU 23 23 23 GLU GLU A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 TRP 26 26 26 TRP TRP A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 PRO 30 30 30 PRO PRO A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 ARG 33 33 33 ARG ARG A . n A 1 34 LYS 34 34 34 LYS LYS A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 LYS 37 37 37 LYS LYS A . n A 1 38 ILE 38 38 38 ILE ILE A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 PHE 41 41 41 PHE PHE A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 THR 46 46 46 THR THR A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 TYR 49 49 49 TYR TYR A . n A 1 50 PHE 50 50 50 PHE PHE A . n A 1 51 ARG 51 51 51 ARG ARG A . n A 1 52 HIS 52 52 52 HIS HIS A . n A 1 53 LYS 53 53 53 LYS LYS A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 PRO 55 55 55 PRO PRO A . n A 1 56 ASP 56 56 56 ASP ASP A . n A 1 57 ASP 57 57 57 ASP ASP A . n A 1 58 TYR 58 58 58 TYR TYR A . n A 1 59 PRO 59 59 59 PRO PRO A . n A 1 60 ILE 60 60 60 ILE ILE A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 SER 2 2 ? ? ? B . n B 1 3 SER 3 3 3 SER SER B . n B 1 4 GLY 4 4 4 GLY GLY B . n B 1 5 LYS 5 5 5 LYS LYS B . n B 1 6 LYS 6 6 6 LYS LYS B . n B 1 7 PRO 7 7 7 PRO PRO B . n B 1 8 VAL 8 8 8 VAL VAL B . n B 1 9 LYS 9 9 9 LYS LYS B . n B 1 10 VAL 10 10 10 VAL VAL B . n B 1 11 LYS 11 11 11 LYS LYS B . n B 1 12 THR 12 12 12 THR THR B . n B 1 13 PRO 13 13 13 PRO PRO B . n B 1 14 ALA 14 14 14 ALA ALA B . n B 1 15 GLY 15 15 15 GLY GLY B . n B 1 16 LYS 16 16 16 LYS LYS B . n B 1 17 GLU 17 17 17 GLU GLU B . n B 1 18 ALA 18 18 18 ALA ALA B . n B 1 19 GLU 19 19 19 GLU GLU B . n B 1 20 LEU 20 20 20 LEU LEU B . n B 1 21 VAL 21 21 21 VAL VAL B . n B 1 22 PRO 22 22 22 PRO PRO B . n B 1 23 GLU 23 23 23 GLU GLU B . n B 1 24 LYS 24 24 24 LYS LYS B . n B 1 25 VAL 25 25 25 VAL VAL B . n B 1 26 TRP 26 26 26 TRP TRP B . n B 1 27 ALA 27 27 27 ALA ALA B . n B 1 28 LEU 28 28 28 LEU LEU B . n B 1 29 ALA 29 29 29 ALA ALA B . n B 1 30 PRO 30 30 30 PRO PRO B . n B 1 31 LYS 31 31 31 LYS LYS B . n B 1 32 GLY 32 32 32 GLY GLY B . n B 1 33 ARG 33 33 33 ARG ARG B . n B 1 34 LYS 34 34 34 LYS LYS B . n B 1 35 GLY 35 35 35 GLY GLY B . n B 1 36 VAL 36 36 36 VAL VAL B . n B 1 37 LYS 37 37 37 LYS LYS B . n B 1 38 ILE 38 38 38 ILE ILE B . n B 1 39 GLY 39 39 39 GLY GLY B . n B 1 40 LEU 40 40 40 LEU LEU B . n B 1 41 PHE 41 41 41 PHE PHE B . n B 1 42 LYS 42 42 42 LYS LYS B . n B 1 43 ASP 43 43 43 ASP ASP B . n B 1 44 PRO 44 44 44 PRO PRO B . n B 1 45 GLU 45 45 45 GLU GLU B . n B 1 46 THR 46 46 46 THR THR B . n B 1 47 GLY 47 47 47 GLY GLY B . n B 1 48 LYS 48 48 48 LYS LYS B . n B 1 49 TYR 49 49 49 TYR TYR B . n B 1 50 PHE 50 50 50 PHE PHE B . n B 1 51 ARG 51 51 51 ARG ARG B . n B 1 52 HIS 52 52 52 HIS HIS B . n B 1 53 LYS 53 53 53 LYS LYS B . n B 1 54 LEU 54 54 54 LEU LEU B . n B 1 55 PRO 55 55 55 PRO PRO B . n B 1 56 ASP 56 56 56 ASP ASP B . n B 1 57 ASP 57 57 57 ASP ASP B . n B 1 58 TYR 58 58 58 TYR TYR B . n B 1 59 PRO 59 59 59 PRO PRO B . n B 1 60 ILE 60 60 60 ILE ILE B . n C 2 1 DG 1 101 101 DG G C . n C 2 2 DC 2 102 102 DC C C . n C 2 3 DG 3 103 103 DG G C . n C 2 4 DA 4 104 104 DA A C . n C 2 5 DT 5 105 105 DT T C . n C 2 6 DC 6 106 106 DC C C . n C 2 7 DG 7 107 107 DG G C . n C 2 8 DC 8 108 108 DC C C . n D 2 1 DG 1 109 109 DG G D . n D 2 2 DC 2 110 110 DC C D . n D 2 3 DG 3 111 111 DG G D . n D 2 4 DA 4 112 112 DA A D . n D 2 5 DT 5 113 113 DT T D . n D 2 6 DC 6 114 114 DC C D . n D 2 7 DG 7 115 115 DG G D . n D 2 8 DC 8 116 116 DC C D . n E 2 1 DG 1 101 101 DG G E . n E 2 2 DC 2 102 102 DC C E . n E 2 3 DG 3 103 103 DG G E . n E 2 4 DA 4 104 104 DA A E . n E 2 5 DT 5 105 105 DT T E . n E 2 6 DC 6 106 106 DC C E . n E 2 7 DG 7 107 107 DG G E . n E 2 8 DC 8 108 108 DC C E . n F 2 1 DG 1 109 109 DG G F . n F 2 2 DC 2 110 110 DC C F . n F 2 3 DG 3 111 111 DG G F . n F 2 4 DA 4 112 112 DA A F . n F 2 5 DT 5 113 113 DT T F . n F 2 6 DC 6 114 114 DC C F . n F 2 7 DG 7 115 115 DG G F . n F 2 8 DC 8 116 116 DC C F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 HOH 1 61 6 HOH HOH A . G 3 HOH 2 62 62 HOH HOH A . G 3 HOH 3 63 8 HOH HOH A . G 3 HOH 4 64 18 HOH HOH A . G 3 HOH 5 65 65 HOH HOH A . G 3 HOH 6 66 19 HOH HOH A . G 3 HOH 7 67 67 HOH HOH A . G 3 HOH 8 68 68 HOH HOH A . G 3 HOH 9 69 21 HOH HOH A . G 3 HOH 10 70 22 HOH HOH A . G 3 HOH 11 71 71 HOH HOH A . G 3 HOH 12 72 29 HOH HOH A . G 3 HOH 13 73 40 HOH HOH A . G 3 HOH 14 74 59 HOH HOH A . G 3 HOH 15 75 30 HOH HOH A . G 3 HOH 16 93 93 HOH HOH A . G 3 HOH 17 100 100 HOH HOH A . G 3 HOH 18 107 107 HOH HOH A . G 3 HOH 19 114 114 HOH HOH A . H 3 HOH 1 61 1 HOH HOH B . H 3 HOH 2 62 7 HOH HOH B . H 3 HOH 3 63 11 HOH HOH B . H 3 HOH 4 64 23 HOH HOH B . H 3 HOH 5 65 27 HOH HOH B . H 3 HOH 6 66 34 HOH HOH B . H 3 HOH 7 67 45 HOH HOH B . H 3 HOH 8 68 46 HOH HOH B . H 3 HOH 9 72 72 HOH HOH B . H 3 HOH 10 73 73 HOH HOH B . H 3 HOH 11 74 74 HOH HOH B . H 3 HOH 12 76 76 HOH HOH B . H 3 HOH 13 94 94 HOH HOH B . H 3 HOH 14 95 95 HOH HOH B . H 3 HOH 15 98 98 HOH HOH B . H 3 HOH 16 101 101 HOH HOH B . H 3 HOH 17 102 102 HOH HOH B . H 3 HOH 18 108 108 HOH HOH B . I 3 HOH 1 17 17 HOH HOH C . I 3 HOH 2 26 26 HOH HOH C . I 3 HOH 3 31 31 HOH HOH C . I 3 HOH 4 33 33 HOH HOH C . I 3 HOH 5 39 39 HOH HOH C . I 3 HOH 6 44 44 HOH HOH C . I 3 HOH 7 47 47 HOH HOH C . I 3 HOH 8 49 49 HOH HOH C . I 3 HOH 9 61 61 HOH HOH C . I 3 HOH 10 66 66 HOH HOH C . I 3 HOH 11 69 69 HOH HOH C . I 3 HOH 12 70 70 HOH HOH C . I 3 HOH 13 75 75 HOH HOH C . I 3 HOH 14 77 77 HOH HOH C . I 3 HOH 15 81 81 HOH HOH C . I 3 HOH 16 84 84 HOH HOH C . I 3 HOH 17 85 85 HOH HOH C . I 3 HOH 18 87 87 HOH HOH C . I 3 HOH 19 92 92 HOH HOH C . I 3 HOH 20 96 96 HOH HOH C . I 3 HOH 21 109 104 HOH HOH C . I 3 HOH 22 110 110 HOH HOH C . I 3 HOH 23 111 105 HOH HOH C . J 3 HOH 1 2 2 HOH HOH D . J 3 HOH 2 4 4 HOH HOH D . J 3 HOH 3 9 9 HOH HOH D . J 3 HOH 4 15 15 HOH HOH D . J 3 HOH 5 20 20 HOH HOH D . J 3 HOH 6 37 37 HOH HOH D . J 3 HOH 7 41 41 HOH HOH D . J 3 HOH 8 43 43 HOH HOH D . J 3 HOH 9 48 48 HOH HOH D . J 3 HOH 10 50 50 HOH HOH D . J 3 HOH 11 54 54 HOH HOH D . J 3 HOH 12 55 55 HOH HOH D . J 3 HOH 13 56 56 HOH HOH D . J 3 HOH 14 58 58 HOH HOH D . J 3 HOH 15 60 60 HOH HOH D . J 3 HOH 16 63 63 HOH HOH D . J 3 HOH 17 79 79 HOH HOH D . J 3 HOH 18 83 83 HOH HOH D . J 3 HOH 19 88 88 HOH HOH D . J 3 HOH 20 97 97 HOH HOH D . J 3 HOH 21 117 115 HOH HOH D . K 3 HOH 1 13 13 HOH HOH E . K 3 HOH 2 24 24 HOH HOH E . K 3 HOH 3 25 25 HOH HOH E . K 3 HOH 4 28 28 HOH HOH E . K 3 HOH 5 35 35 HOH HOH E . K 3 HOH 6 38 38 HOH HOH E . K 3 HOH 7 52 52 HOH HOH E . K 3 HOH 8 53 53 HOH HOH E . K 3 HOH 9 57 57 HOH HOH E . K 3 HOH 10 64 64 HOH HOH E . K 3 HOH 11 80 80 HOH HOH E . K 3 HOH 12 89 89 HOH HOH E . K 3 HOH 13 91 91 HOH HOH E . K 3 HOH 14 99 99 HOH HOH E . K 3 HOH 15 109 106 HOH HOH E . L 3 HOH 1 3 3 HOH HOH F . L 3 HOH 2 5 5 HOH HOH F . L 3 HOH 3 10 10 HOH HOH F . L 3 HOH 4 12 12 HOH HOH F . L 3 HOH 5 14 14 HOH HOH F . L 3 HOH 6 16 16 HOH HOH F . L 3 HOH 7 32 32 HOH HOH F . L 3 HOH 8 36 36 HOH HOH F . L 3 HOH 9 42 42 HOH HOH F . L 3 HOH 10 51 51 HOH HOH F . L 3 HOH 11 78 78 HOH HOH F . L 3 HOH 12 82 82 HOH HOH F . L 3 HOH 13 86 86 HOH HOH F . L 3 HOH 14 90 90 HOH HOH F . L 3 HOH 15 103 103 HOH HOH F . L 3 HOH 16 117 109 HOH HOH F . L 3 HOH 17 118 111 HOH HOH F . L 3 HOH 18 119 112 HOH HOH F . L 3 HOH 19 120 113 HOH HOH F . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA trimeric 3 2 author_and_software_defined_assembly PISA trimeric 3 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,G,I,J 2 1 B,E,F,H,K,L # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2560 ? 1 MORE -10 ? 1 'SSA (A^2)' 5820 ? 2 'ABSA (A^2)' 2540 ? 2 MORE -11 ? 2 'SSA (A^2)' 5810 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-05-26 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2014-03-05 4 'Structure model' 1 3 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Refinement description' 3 2 'Structure model' 'Version format compliance' 4 3 'Structure model' 'Database references' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 16.9770 21.9040 -32.8630 -0.0451 0.0050 -0.0584 0.1081 -0.0391 -0.1187 13.9928 5.2775 6.5166 -2.7664 2.9999 -0.5727 0.1597 -0.3009 0.1411 0.0026 0.8069 0.7005 -0.3271 -0.6675 -1.1171 'X-RAY DIFFRACTION' 2 ? refined 18.0820 17.8130 -34.6690 -0.1546 -0.0599 -0.2111 0.0794 -0.0426 -0.0389 12.7916 8.8829 6.9901 3.4860 3.1164 2.2673 -0.1965 -0.0419 0.2384 0.2195 0.2828 0.9109 -0.1561 -0.0123 -0.5411 'X-RAY DIFFRACTION' 3 ? refined 16.8200 16.8850 -6.6070 -0.0332 -0.0301 -0.0601 -0.1038 0.1081 -0.0532 5.1234 12.9299 6.3680 2.7851 0.2213 2.0231 -0.1588 0.0760 0.0829 0.3276 -0.7183 0.6429 -0.0368 1.0417 -0.7248 'X-RAY DIFFRACTION' 4 ? refined 20.8750 18.0270 -8.4070 -0.0489 -0.1481 -0.2172 -0.0887 0.0433 -0.0222 12.0008 13.7184 6.6347 -6.3840 -2.9113 4.7422 -0.0615 -0.1375 0.1991 0.2632 -0.9353 0.3859 -0.1856 0.5280 -0.0977 'X-RAY DIFFRACTION' 5 ? refined 28.4600 12.7100 -36.6950 -0.1880 -0.1624 -0.2562 -0.0081 -0.0179 -0.0165 5.4929 2.8758 4.0120 1.2241 0.3201 1.2474 -0.0229 -0.0111 0.0339 0.1981 -0.1292 -0.1093 -0.2654 0.0618 0.1458 'X-RAY DIFFRACTION' 6 ? refined 25.9900 28.3890 -10.4400 -0.1600 -0.1696 -0.2593 0.0123 0.0049 -0.0090 2.9935 6.0164 3.4096 -1.6242 -1.4190 0.5178 -0.0358 0.0323 0.0035 0.2174 0.0872 -0.0945 -0.2030 -0.1251 0.0940 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 8 A 12 ? . . . . ? 'X-RAY DIFFRACTION' 2 1 A 15 A 29 ? . . . . ? 'X-RAY DIFFRACTION' 3 2 A 36 A 43 ? . . . . ? 'X-RAY DIFFRACTION' 4 2 A 47 A 53 ? . . . . ? 'X-RAY DIFFRACTION' 5 3 B 8 B 12 ? . . . . ? 'X-RAY DIFFRACTION' 6 3 B 15 B 29 ? . . . . ? 'X-RAY DIFFRACTION' 7 4 B 36 B 43 ? . . . . ? 'X-RAY DIFFRACTION' 8 4 B 47 B 53 ? . . . . ? 'X-RAY DIFFRACTION' 9 5 C 101 C 108 ? . . . . ? 'X-RAY DIFFRACTION' 10 5 D 109 D 116 ? . . . . ? 'X-RAY DIFFRACTION' 11 6 E 101 E 108 ? . . . . ? 'X-RAY DIFFRACTION' 12 6 F 109 F 116 ? . . . . ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.2.0019 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" C DA 104 ? ? "C1'" C DA 104 ? ? N9 C DA 104 ? ? 101.44 108.00 -6.56 0.70 N 2 1 "O4'" D DG 111 ? ? "C1'" D DG 111 ? ? N9 D DG 111 ? ? 100.68 108.00 -7.32 0.70 N 3 1 "O4'" E DA 104 ? ? "C1'" E DA 104 ? ? N9 E DA 104 ? ? 101.98 108.00 -6.02 0.70 N 4 1 "O4'" F DG 111 ? ? "C1'" F DG 111 ? ? N9 F DG 111 ? ? 100.80 108.00 -7.20 0.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 5 ? ? -121.13 -64.56 2 1 LYS B 5 ? ? -121.31 -65.52 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A SER 2 ? A SER 2 3 1 Y 1 B MET 1 ? B MET 1 4 1 Y 1 B SER 2 ? B SER 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASP N N N N 41 ASP CA C N S 42 ASP C C N N 43 ASP O O N N 44 ASP CB C N N 45 ASP CG C N N 46 ASP OD1 O N N 47 ASP OD2 O N N 48 ASP OXT O N N 49 ASP H H N N 50 ASP H2 H N N 51 ASP HA H N N 52 ASP HB2 H N N 53 ASP HB3 H N N 54 ASP HD2 H N N 55 ASP HXT H N N 56 DA OP3 O N N 57 DA P P N N 58 DA OP1 O N N 59 DA OP2 O N N 60 DA "O5'" O N N 61 DA "C5'" C N N 62 DA "C4'" C N R 63 DA "O4'" O N N 64 DA "C3'" C N S 65 DA "O3'" O N N 66 DA "C2'" C N N 67 DA "C1'" C N R 68 DA N9 N Y N 69 DA C8 C Y N 70 DA N7 N Y N 71 DA C5 C Y N 72 DA C6 C Y N 73 DA N6 N N N 74 DA N1 N Y N 75 DA C2 C Y N 76 DA N3 N Y N 77 DA C4 C Y N 78 DA HOP3 H N N 79 DA HOP2 H N N 80 DA "H5'" H N N 81 DA "H5''" H N N 82 DA "H4'" H N N 83 DA "H3'" H N N 84 DA "HO3'" H N N 85 DA "H2'" H N N 86 DA "H2''" H N N 87 DA "H1'" H N N 88 DA H8 H N N 89 DA H61 H N N 90 DA H62 H N N 91 DA H2 H N N 92 DC OP3 O N N 93 DC P P N N 94 DC OP1 O N N 95 DC OP2 O N N 96 DC "O5'" O N N 97 DC "C5'" C N N 98 DC "C4'" C N R 99 DC "O4'" O N N 100 DC "C3'" C N S 101 DC "O3'" O N N 102 DC "C2'" C N N 103 DC "C1'" C N R 104 DC N1 N N N 105 DC C2 C N N 106 DC O2 O N N 107 DC N3 N N N 108 DC C4 C N N 109 DC N4 N N N 110 DC C5 C N N 111 DC C6 C N N 112 DC HOP3 H N N 113 DC HOP2 H N N 114 DC "H5'" H N N 115 DC "H5''" H N N 116 DC "H4'" H N N 117 DC "H3'" H N N 118 DC "HO3'" H N N 119 DC "H2'" H N N 120 DC "H2''" H N N 121 DC "H1'" H N N 122 DC H41 H N N 123 DC H42 H N N 124 DC H5 H N N 125 DC H6 H N N 126 DG OP3 O N N 127 DG P P N N 128 DG OP1 O N N 129 DG OP2 O N N 130 DG "O5'" O N N 131 DG "C5'" C N N 132 DG "C4'" C N R 133 DG "O4'" O N N 134 DG "C3'" C N S 135 DG "O3'" O N N 136 DG "C2'" C N N 137 DG "C1'" C N R 138 DG N9 N Y N 139 DG C8 C Y N 140 DG N7 N Y N 141 DG C5 C Y N 142 DG C6 C N N 143 DG O6 O N N 144 DG N1 N N N 145 DG C2 C N N 146 DG N2 N N N 147 DG N3 N N N 148 DG C4 C Y N 149 DG HOP3 H N N 150 DG HOP2 H N N 151 DG "H5'" H N N 152 DG "H5''" H N N 153 DG "H4'" H N N 154 DG "H3'" H N N 155 DG "HO3'" H N N 156 DG "H2'" H N N 157 DG "H2''" H N N 158 DG "H1'" H N N 159 DG H8 H N N 160 DG H1 H N N 161 DG H21 H N N 162 DG H22 H N N 163 DT OP3 O N N 164 DT P P N N 165 DT OP1 O N N 166 DT OP2 O N N 167 DT "O5'" O N N 168 DT "C5'" C N N 169 DT "C4'" C N R 170 DT "O4'" O N N 171 DT "C3'" C N S 172 DT "O3'" O N N 173 DT "C2'" C N N 174 DT "C1'" C N R 175 DT N1 N N N 176 DT C2 C N N 177 DT O2 O N N 178 DT N3 N N N 179 DT C4 C N N 180 DT O4 O N N 181 DT C5 C N N 182 DT C7 C N N 183 DT C6 C N N 184 DT HOP3 H N N 185 DT HOP2 H N N 186 DT "H5'" H N N 187 DT "H5''" H N N 188 DT "H4'" H N N 189 DT "H3'" H N N 190 DT "HO3'" H N N 191 DT "H2'" H N N 192 DT "H2''" H N N 193 DT "H1'" H N N 194 DT H3 H N N 195 DT H71 H N N 196 DT H72 H N N 197 DT H73 H N N 198 DT H6 H N N 199 GLU N N N N 200 GLU CA C N S 201 GLU C C N N 202 GLU O O N N 203 GLU CB C N N 204 GLU CG C N N 205 GLU CD C N N 206 GLU OE1 O N N 207 GLU OE2 O N N 208 GLU OXT O N N 209 GLU H H N N 210 GLU H2 H N N 211 GLU HA H N N 212 GLU HB2 H N N 213 GLU HB3 H N N 214 GLU HG2 H N N 215 GLU HG3 H N N 216 GLU HE2 H N N 217 GLU HXT H N N 218 GLY N N N N 219 GLY CA C N N 220 GLY C C N N 221 GLY O O N N 222 GLY OXT O N N 223 GLY H H N N 224 GLY H2 H N N 225 GLY HA2 H N N 226 GLY HA3 H N N 227 GLY HXT H N N 228 HIS N N N N 229 HIS CA C N S 230 HIS C C N N 231 HIS O O N N 232 HIS CB C N N 233 HIS CG C Y N 234 HIS ND1 N Y N 235 HIS CD2 C Y N 236 HIS CE1 C Y N 237 HIS NE2 N Y N 238 HIS OXT O N N 239 HIS H H N N 240 HIS H2 H N N 241 HIS HA H N N 242 HIS HB2 H N N 243 HIS HB3 H N N 244 HIS HD1 H N N 245 HIS HD2 H N N 246 HIS HE1 H N N 247 HIS HE2 H N N 248 HIS HXT H N N 249 HOH O O N N 250 HOH H1 H N N 251 HOH H2 H N N 252 ILE N N N N 253 ILE CA C N S 254 ILE C C N N 255 ILE O O N N 256 ILE CB C N S 257 ILE CG1 C N N 258 ILE CG2 C N N 259 ILE CD1 C N N 260 ILE OXT O N N 261 ILE H H N N 262 ILE H2 H N N 263 ILE HA H N N 264 ILE HB H N N 265 ILE HG12 H N N 266 ILE HG13 H N N 267 ILE HG21 H N N 268 ILE HG22 H N N 269 ILE HG23 H N N 270 ILE HD11 H N N 271 ILE HD12 H N N 272 ILE HD13 H N N 273 ILE HXT H N N 274 LEU N N N N 275 LEU CA C N S 276 LEU C C N N 277 LEU O O N N 278 LEU CB C N N 279 LEU CG C N N 280 LEU CD1 C N N 281 LEU CD2 C N N 282 LEU OXT O N N 283 LEU H H N N 284 LEU H2 H N N 285 LEU HA H N N 286 LEU HB2 H N N 287 LEU HB3 H N N 288 LEU HG H N N 289 LEU HD11 H N N 290 LEU HD12 H N N 291 LEU HD13 H N N 292 LEU HD21 H N N 293 LEU HD22 H N N 294 LEU HD23 H N N 295 LEU HXT H N N 296 LYS N N N N 297 LYS CA C N S 298 LYS C C N N 299 LYS O O N N 300 LYS CB C N N 301 LYS CG C N N 302 LYS CD C N N 303 LYS CE C N N 304 LYS NZ N N N 305 LYS OXT O N N 306 LYS H H N N 307 LYS H2 H N N 308 LYS HA H N N 309 LYS HB2 H N N 310 LYS HB3 H N N 311 LYS HG2 H N N 312 LYS HG3 H N N 313 LYS HD2 H N N 314 LYS HD3 H N N 315 LYS HE2 H N N 316 LYS HE3 H N N 317 LYS HZ1 H N N 318 LYS HZ2 H N N 319 LYS HZ3 H N N 320 LYS HXT H N N 321 MET N N N N 322 MET CA C N S 323 MET C C N N 324 MET O O N N 325 MET CB C N N 326 MET CG C N N 327 MET SD S N N 328 MET CE C N N 329 MET OXT O N N 330 MET H H N N 331 MET H2 H N N 332 MET HA H N N 333 MET HB2 H N N 334 MET HB3 H N N 335 MET HG2 H N N 336 MET HG3 H N N 337 MET HE1 H N N 338 MET HE2 H N N 339 MET HE3 H N N 340 MET HXT H N N 341 PHE N N N N 342 PHE CA C N S 343 PHE C C N N 344 PHE O O N N 345 PHE CB C N N 346 PHE CG C Y N 347 PHE CD1 C Y N 348 PHE CD2 C Y N 349 PHE CE1 C Y N 350 PHE CE2 C Y N 351 PHE CZ C Y N 352 PHE OXT O N N 353 PHE H H N N 354 PHE H2 H N N 355 PHE HA H N N 356 PHE HB2 H N N 357 PHE HB3 H N N 358 PHE HD1 H N N 359 PHE HD2 H N N 360 PHE HE1 H N N 361 PHE HE2 H N N 362 PHE HZ H N N 363 PHE HXT H N N 364 PRO N N N N 365 PRO CA C N S 366 PRO C C N N 367 PRO O O N N 368 PRO CB C N N 369 PRO CG C N N 370 PRO CD C N N 371 PRO OXT O N N 372 PRO H H N N 373 PRO HA H N N 374 PRO HB2 H N N 375 PRO HB3 H N N 376 PRO HG2 H N N 377 PRO HG3 H N N 378 PRO HD2 H N N 379 PRO HD3 H N N 380 PRO HXT H N N 381 SER N N N N 382 SER CA C N S 383 SER C C N N 384 SER O O N N 385 SER CB C N N 386 SER OG O N N 387 SER OXT O N N 388 SER H H N N 389 SER H2 H N N 390 SER HA H N N 391 SER HB2 H N N 392 SER HB3 H N N 393 SER HG H N N 394 SER HXT H N N 395 THR N N N N 396 THR CA C N S 397 THR C C N N 398 THR O O N N 399 THR CB C N R 400 THR OG1 O N N 401 THR CG2 C N N 402 THR OXT O N N 403 THR H H N N 404 THR H2 H N N 405 THR HA H N N 406 THR HB H N N 407 THR HG1 H N N 408 THR HG21 H N N 409 THR HG22 H N N 410 THR HG23 H N N 411 THR HXT H N N 412 TRP N N N N 413 TRP CA C N S 414 TRP C C N N 415 TRP O O N N 416 TRP CB C N N 417 TRP CG C Y N 418 TRP CD1 C Y N 419 TRP CD2 C Y N 420 TRP NE1 N Y N 421 TRP CE2 C Y N 422 TRP CE3 C Y N 423 TRP CZ2 C Y N 424 TRP CZ3 C Y N 425 TRP CH2 C Y N 426 TRP OXT O N N 427 TRP H H N N 428 TRP H2 H N N 429 TRP HA H N N 430 TRP HB2 H N N 431 TRP HB3 H N N 432 TRP HD1 H N N 433 TRP HE1 H N N 434 TRP HE3 H N N 435 TRP HZ2 H N N 436 TRP HZ3 H N N 437 TRP HH2 H N N 438 TRP HXT H N N 439 TYR N N N N 440 TYR CA C N S 441 TYR C C N N 442 TYR O O N N 443 TYR CB C N N 444 TYR CG C Y N 445 TYR CD1 C Y N 446 TYR CD2 C Y N 447 TYR CE1 C Y N 448 TYR CE2 C Y N 449 TYR CZ C Y N 450 TYR OH O N N 451 TYR OXT O N N 452 TYR H H N N 453 TYR H2 H N N 454 TYR HA H N N 455 TYR HB2 H N N 456 TYR HB3 H N N 457 TYR HD1 H N N 458 TYR HD2 H N N 459 TYR HE1 H N N 460 TYR HE2 H N N 461 TYR HH H N N 462 TYR HXT H N N 463 VAL N N N N 464 VAL CA C N S 465 VAL C C N N 466 VAL O O N N 467 VAL CB C N N 468 VAL CG1 C N N 469 VAL CG2 C N N 470 VAL OXT O N N 471 VAL H H N N 472 VAL H2 H N N 473 VAL HA H N N 474 VAL HB H N N 475 VAL HG11 H N N 476 VAL HG12 H N N 477 VAL HG13 H N N 478 VAL HG21 H N N 479 VAL HG22 H N N 480 VAL HG23 H N N 481 VAL HXT H N N 482 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASP N CA sing N N 39 ASP N H sing N N 40 ASP N H2 sing N N 41 ASP CA C sing N N 42 ASP CA CB sing N N 43 ASP CA HA sing N N 44 ASP C O doub N N 45 ASP C OXT sing N N 46 ASP CB CG sing N N 47 ASP CB HB2 sing N N 48 ASP CB HB3 sing N N 49 ASP CG OD1 doub N N 50 ASP CG OD2 sing N N 51 ASP OD2 HD2 sing N N 52 ASP OXT HXT sing N N 53 DA OP3 P sing N N 54 DA OP3 HOP3 sing N N 55 DA P OP1 doub N N 56 DA P OP2 sing N N 57 DA P "O5'" sing N N 58 DA OP2 HOP2 sing N N 59 DA "O5'" "C5'" sing N N 60 DA "C5'" "C4'" sing N N 61 DA "C5'" "H5'" sing N N 62 DA "C5'" "H5''" sing N N 63 DA "C4'" "O4'" sing N N 64 DA "C4'" "C3'" sing N N 65 DA "C4'" "H4'" sing N N 66 DA "O4'" "C1'" sing N N 67 DA "C3'" "O3'" sing N N 68 DA "C3'" "C2'" sing N N 69 DA "C3'" "H3'" sing N N 70 DA "O3'" "HO3'" sing N N 71 DA "C2'" "C1'" sing N N 72 DA "C2'" "H2'" sing N N 73 DA "C2'" "H2''" sing N N 74 DA "C1'" N9 sing N N 75 DA "C1'" "H1'" sing N N 76 DA N9 C8 sing Y N 77 DA N9 C4 sing Y N 78 DA C8 N7 doub Y N 79 DA C8 H8 sing N N 80 DA N7 C5 sing Y N 81 DA C5 C6 sing Y N 82 DA C5 C4 doub Y N 83 DA C6 N6 sing N N 84 DA C6 N1 doub Y N 85 DA N6 H61 sing N N 86 DA N6 H62 sing N N 87 DA N1 C2 sing Y N 88 DA C2 N3 doub Y N 89 DA C2 H2 sing N N 90 DA N3 C4 sing Y N 91 DC OP3 P sing N N 92 DC OP3 HOP3 sing N N 93 DC P OP1 doub N N 94 DC P OP2 sing N N 95 DC P "O5'" sing N N 96 DC OP2 HOP2 sing N N 97 DC "O5'" "C5'" sing N N 98 DC "C5'" "C4'" sing N N 99 DC "C5'" "H5'" sing N N 100 DC "C5'" "H5''" sing N N 101 DC "C4'" "O4'" sing N N 102 DC "C4'" "C3'" sing N N 103 DC "C4'" "H4'" sing N N 104 DC "O4'" "C1'" sing N N 105 DC "C3'" "O3'" sing N N 106 DC "C3'" "C2'" sing N N 107 DC "C3'" "H3'" sing N N 108 DC "O3'" "HO3'" sing N N 109 DC "C2'" "C1'" sing N N 110 DC "C2'" "H2'" sing N N 111 DC "C2'" "H2''" sing N N 112 DC "C1'" N1 sing N N 113 DC "C1'" "H1'" sing N N 114 DC N1 C2 sing N N 115 DC N1 C6 sing N N 116 DC C2 O2 doub N N 117 DC C2 N3 sing N N 118 DC N3 C4 doub N N 119 DC C4 N4 sing N N 120 DC C4 C5 sing N N 121 DC N4 H41 sing N N 122 DC N4 H42 sing N N 123 DC C5 C6 doub N N 124 DC C5 H5 sing N N 125 DC C6 H6 sing N N 126 DG OP3 P sing N N 127 DG OP3 HOP3 sing N N 128 DG P OP1 doub N N 129 DG P OP2 sing N N 130 DG P "O5'" sing N N 131 DG OP2 HOP2 sing N N 132 DG "O5'" "C5'" sing N N 133 DG "C5'" "C4'" sing N N 134 DG "C5'" "H5'" sing N N 135 DG "C5'" "H5''" sing N N 136 DG "C4'" "O4'" sing N N 137 DG "C4'" "C3'" sing N N 138 DG "C4'" "H4'" sing N N 139 DG "O4'" "C1'" sing N N 140 DG "C3'" "O3'" sing N N 141 DG "C3'" "C2'" sing N N 142 DG "C3'" "H3'" sing N N 143 DG "O3'" "HO3'" sing N N 144 DG "C2'" "C1'" sing N N 145 DG "C2'" "H2'" sing N N 146 DG "C2'" "H2''" sing N N 147 DG "C1'" N9 sing N N 148 DG "C1'" "H1'" sing N N 149 DG N9 C8 sing Y N 150 DG N9 C4 sing Y N 151 DG C8 N7 doub Y N 152 DG C8 H8 sing N N 153 DG N7 C5 sing Y N 154 DG C5 C6 sing N N 155 DG C5 C4 doub Y N 156 DG C6 O6 doub N N 157 DG C6 N1 sing N N 158 DG N1 C2 sing N N 159 DG N1 H1 sing N N 160 DG C2 N2 sing N N 161 DG C2 N3 doub N N 162 DG N2 H21 sing N N 163 DG N2 H22 sing N N 164 DG N3 C4 sing N N 165 DT OP3 P sing N N 166 DT OP3 HOP3 sing N N 167 DT P OP1 doub N N 168 DT P OP2 sing N N 169 DT P "O5'" sing N N 170 DT OP2 HOP2 sing N N 171 DT "O5'" "C5'" sing N N 172 DT "C5'" "C4'" sing N N 173 DT "C5'" "H5'" sing N N 174 DT "C5'" "H5''" sing N N 175 DT "C4'" "O4'" sing N N 176 DT "C4'" "C3'" sing N N 177 DT "C4'" "H4'" sing N N 178 DT "O4'" "C1'" sing N N 179 DT "C3'" "O3'" sing N N 180 DT "C3'" "C2'" sing N N 181 DT "C3'" "H3'" sing N N 182 DT "O3'" "HO3'" sing N N 183 DT "C2'" "C1'" sing N N 184 DT "C2'" "H2'" sing N N 185 DT "C2'" "H2''" sing N N 186 DT "C1'" N1 sing N N 187 DT "C1'" "H1'" sing N N 188 DT N1 C2 sing N N 189 DT N1 C6 sing N N 190 DT C2 O2 doub N N 191 DT C2 N3 sing N N 192 DT N3 C4 sing N N 193 DT N3 H3 sing N N 194 DT C4 O4 doub N N 195 DT C4 C5 sing N N 196 DT C5 C7 sing N N 197 DT C5 C6 doub N N 198 DT C7 H71 sing N N 199 DT C7 H72 sing N N 200 DT C7 H73 sing N N 201 DT C6 H6 sing N N 202 GLU N CA sing N N 203 GLU N H sing N N 204 GLU N H2 sing N N 205 GLU CA C sing N N 206 GLU CA CB sing N N 207 GLU CA HA sing N N 208 GLU C O doub N N 209 GLU C OXT sing N N 210 GLU CB CG sing N N 211 GLU CB HB2 sing N N 212 GLU CB HB3 sing N N 213 GLU CG CD sing N N 214 GLU CG HG2 sing N N 215 GLU CG HG3 sing N N 216 GLU CD OE1 doub N N 217 GLU CD OE2 sing N N 218 GLU OE2 HE2 sing N N 219 GLU OXT HXT sing N N 220 GLY N CA sing N N 221 GLY N H sing N N 222 GLY N H2 sing N N 223 GLY CA C sing N N 224 GLY CA HA2 sing N N 225 GLY CA HA3 sing N N 226 GLY C O doub N N 227 GLY C OXT sing N N 228 GLY OXT HXT sing N N 229 HIS N CA sing N N 230 HIS N H sing N N 231 HIS N H2 sing N N 232 HIS CA C sing N N 233 HIS CA CB sing N N 234 HIS CA HA sing N N 235 HIS C O doub N N 236 HIS C OXT sing N N 237 HIS CB CG sing N N 238 HIS CB HB2 sing N N 239 HIS CB HB3 sing N N 240 HIS CG ND1 sing Y N 241 HIS CG CD2 doub Y N 242 HIS ND1 CE1 doub Y N 243 HIS ND1 HD1 sing N N 244 HIS CD2 NE2 sing Y N 245 HIS CD2 HD2 sing N N 246 HIS CE1 NE2 sing Y N 247 HIS CE1 HE1 sing N N 248 HIS NE2 HE2 sing N N 249 HIS OXT HXT sing N N 250 HOH O H1 sing N N 251 HOH O H2 sing N N 252 ILE N CA sing N N 253 ILE N H sing N N 254 ILE N H2 sing N N 255 ILE CA C sing N N 256 ILE CA CB sing N N 257 ILE CA HA sing N N 258 ILE C O doub N N 259 ILE C OXT sing N N 260 ILE CB CG1 sing N N 261 ILE CB CG2 sing N N 262 ILE CB HB sing N N 263 ILE CG1 CD1 sing N N 264 ILE CG1 HG12 sing N N 265 ILE CG1 HG13 sing N N 266 ILE CG2 HG21 sing N N 267 ILE CG2 HG22 sing N N 268 ILE CG2 HG23 sing N N 269 ILE CD1 HD11 sing N N 270 ILE CD1 HD12 sing N N 271 ILE CD1 HD13 sing N N 272 ILE OXT HXT sing N N 273 LEU N CA sing N N 274 LEU N H sing N N 275 LEU N H2 sing N N 276 LEU CA C sing N N 277 LEU CA CB sing N N 278 LEU CA HA sing N N 279 LEU C O doub N N 280 LEU C OXT sing N N 281 LEU CB CG sing N N 282 LEU CB HB2 sing N N 283 LEU CB HB3 sing N N 284 LEU CG CD1 sing N N 285 LEU CG CD2 sing N N 286 LEU CG HG sing N N 287 LEU CD1 HD11 sing N N 288 LEU CD1 HD12 sing N N 289 LEU CD1 HD13 sing N N 290 LEU CD2 HD21 sing N N 291 LEU CD2 HD22 sing N N 292 LEU CD2 HD23 sing N N 293 LEU OXT HXT sing N N 294 LYS N CA sing N N 295 LYS N H sing N N 296 LYS N H2 sing N N 297 LYS CA C sing N N 298 LYS CA CB sing N N 299 LYS CA HA sing N N 300 LYS C O doub N N 301 LYS C OXT sing N N 302 LYS CB CG sing N N 303 LYS CB HB2 sing N N 304 LYS CB HB3 sing N N 305 LYS CG CD sing N N 306 LYS CG HG2 sing N N 307 LYS CG HG3 sing N N 308 LYS CD CE sing N N 309 LYS CD HD2 sing N N 310 LYS CD HD3 sing N N 311 LYS CE NZ sing N N 312 LYS CE HE2 sing N N 313 LYS CE HE3 sing N N 314 LYS NZ HZ1 sing N N 315 LYS NZ HZ2 sing N N 316 LYS NZ HZ3 sing N N 317 LYS OXT HXT sing N N 318 MET N CA sing N N 319 MET N H sing N N 320 MET N H2 sing N N 321 MET CA C sing N N 322 MET CA CB sing N N 323 MET CA HA sing N N 324 MET C O doub N N 325 MET C OXT sing N N 326 MET CB CG sing N N 327 MET CB HB2 sing N N 328 MET CB HB3 sing N N 329 MET CG SD sing N N 330 MET CG HG2 sing N N 331 MET CG HG3 sing N N 332 MET SD CE sing N N 333 MET CE HE1 sing N N 334 MET CE HE2 sing N N 335 MET CE HE3 sing N N 336 MET OXT HXT sing N N 337 PHE N CA sing N N 338 PHE N H sing N N 339 PHE N H2 sing N N 340 PHE CA C sing N N 341 PHE CA CB sing N N 342 PHE CA HA sing N N 343 PHE C O doub N N 344 PHE C OXT sing N N 345 PHE CB CG sing N N 346 PHE CB HB2 sing N N 347 PHE CB HB3 sing N N 348 PHE CG CD1 doub Y N 349 PHE CG CD2 sing Y N 350 PHE CD1 CE1 sing Y N 351 PHE CD1 HD1 sing N N 352 PHE CD2 CE2 doub Y N 353 PHE CD2 HD2 sing N N 354 PHE CE1 CZ doub Y N 355 PHE CE1 HE1 sing N N 356 PHE CE2 CZ sing Y N 357 PHE CE2 HE2 sing N N 358 PHE CZ HZ sing N N 359 PHE OXT HXT sing N N 360 PRO N CA sing N N 361 PRO N CD sing N N 362 PRO N H sing N N 363 PRO CA C sing N N 364 PRO CA CB sing N N 365 PRO CA HA sing N N 366 PRO C O doub N N 367 PRO C OXT sing N N 368 PRO CB CG sing N N 369 PRO CB HB2 sing N N 370 PRO CB HB3 sing N N 371 PRO CG CD sing N N 372 PRO CG HG2 sing N N 373 PRO CG HG3 sing N N 374 PRO CD HD2 sing N N 375 PRO CD HD3 sing N N 376 PRO OXT HXT sing N N 377 SER N CA sing N N 378 SER N H sing N N 379 SER N H2 sing N N 380 SER CA C sing N N 381 SER CA CB sing N N 382 SER CA HA sing N N 383 SER C O doub N N 384 SER C OXT sing N N 385 SER CB OG sing N N 386 SER CB HB2 sing N N 387 SER CB HB3 sing N N 388 SER OG HG sing N N 389 SER OXT HXT sing N N 390 THR N CA sing N N 391 THR N H sing N N 392 THR N H2 sing N N 393 THR CA C sing N N 394 THR CA CB sing N N 395 THR CA HA sing N N 396 THR C O doub N N 397 THR C OXT sing N N 398 THR CB OG1 sing N N 399 THR CB CG2 sing N N 400 THR CB HB sing N N 401 THR OG1 HG1 sing N N 402 THR CG2 HG21 sing N N 403 THR CG2 HG22 sing N N 404 THR CG2 HG23 sing N N 405 THR OXT HXT sing N N 406 TRP N CA sing N N 407 TRP N H sing N N 408 TRP N H2 sing N N 409 TRP CA C sing N N 410 TRP CA CB sing N N 411 TRP CA HA sing N N 412 TRP C O doub N N 413 TRP C OXT sing N N 414 TRP CB CG sing N N 415 TRP CB HB2 sing N N 416 TRP CB HB3 sing N N 417 TRP CG CD1 doub Y N 418 TRP CG CD2 sing Y N 419 TRP CD1 NE1 sing Y N 420 TRP CD1 HD1 sing N N 421 TRP CD2 CE2 doub Y N 422 TRP CD2 CE3 sing Y N 423 TRP NE1 CE2 sing Y N 424 TRP NE1 HE1 sing N N 425 TRP CE2 CZ2 sing Y N 426 TRP CE3 CZ3 doub Y N 427 TRP CE3 HE3 sing N N 428 TRP CZ2 CH2 doub Y N 429 TRP CZ2 HZ2 sing N N 430 TRP CZ3 CH2 sing Y N 431 TRP CZ3 HZ3 sing N N 432 TRP CH2 HH2 sing N N 433 TRP OXT HXT sing N N 434 TYR N CA sing N N 435 TYR N H sing N N 436 TYR N H2 sing N N 437 TYR CA C sing N N 438 TYR CA CB sing N N 439 TYR CA HA sing N N 440 TYR C O doub N N 441 TYR C OXT sing N N 442 TYR CB CG sing N N 443 TYR CB HB2 sing N N 444 TYR CB HB3 sing N N 445 TYR CG CD1 doub Y N 446 TYR CG CD2 sing Y N 447 TYR CD1 CE1 sing Y N 448 TYR CD1 HD1 sing N N 449 TYR CD2 CE2 doub Y N 450 TYR CD2 HD2 sing N N 451 TYR CE1 CZ doub Y N 452 TYR CE1 HE1 sing N N 453 TYR CE2 CZ sing Y N 454 TYR CE2 HE2 sing N N 455 TYR CZ OH sing N N 456 TYR OH HH sing N N 457 TYR OXT HXT sing N N 458 VAL N CA sing N N 459 VAL N H sing N N 460 VAL N H2 sing N N 461 VAL CA C sing N N 462 VAL CA CB sing N N 463 VAL CA HA sing N N 464 VAL C O doub N N 465 VAL C OXT sing N N 466 VAL CB CG1 sing N N 467 VAL CB CG2 sing N N 468 VAL CB HB sing N N 469 VAL CG1 HG11 sing N N 470 VAL CG1 HG12 sing N N 471 VAL CG1 HG13 sing N N 472 VAL CG2 HG21 sing N N 473 VAL CG2 HG22 sing N N 474 VAL CG2 HG23 sing N N 475 VAL OXT HXT sing N N 476 # _ndb_struct_conf_na.entry_id 3LWI _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DG 1 1_555 D DC 8 1_555 -0.230 -0.101 -0.192 -3.602 -0.209 2.846 1 C_DG101:DC116_D C 101 ? D 116 ? 19 1 1 C DC 2 1_555 D DG 7 1_555 0.197 -0.115 0.061 3.491 -5.247 0.746 2 C_DC102:DG115_D C 102 ? D 115 ? 19 1 1 C DG 3 1_555 D DC 6 1_555 -0.120 -0.162 0.415 21.347 -7.400 -2.493 3 C_DG103:DC114_D C 103 ? D 114 ? 19 1 1 C DA 4 1_555 D DT 5 1_555 0.256 -0.136 -0.264 -20.281 0.788 4.239 4 C_DA104:DT113_D C 104 ? D 113 ? 20 1 1 C DT 5 1_555 D DA 4 1_555 -0.191 -0.083 0.110 -7.312 -11.665 1.565 5 C_DT105:DA112_D C 105 ? D 112 ? 20 1 1 C DC 6 1_555 D DG 3 1_555 0.242 -0.085 0.171 3.908 -1.677 1.063 6 C_DC106:DG111_D C 106 ? D 111 ? 19 1 1 C DG 7 1_555 D DC 2 1_555 -0.316 -0.264 0.411 7.128 -8.317 -2.108 7 C_DG107:DC110_D C 107 ? D 110 ? 19 1 1 C DC 8 1_555 D DG 1 1_555 0.352 -0.155 -0.025 6.117 -2.947 0.247 8 C_DC108:DG109_D C 108 ? D 109 ? 19 1 1 E DG 1 1_555 F DC 8 1_555 -0.185 -0.146 -0.226 -4.167 -0.514 2.666 9 E_DG101:DC116_F E 101 ? F 116 ? 19 1 1 E DC 2 1_555 F DG 7 1_555 0.177 -0.142 0.080 2.963 -5.160 0.854 10 E_DC102:DG115_F E 102 ? F 115 ? 19 1 1 E DG 3 1_555 F DC 6 1_555 -0.104 -0.178 0.414 20.555 -7.405 -2.862 11 E_DG103:DC114_F E 103 ? F 114 ? 19 1 1 E DA 4 1_555 F DT 5 1_555 0.252 -0.120 -0.253 -20.937 1.954 4.092 12 E_DA104:DT113_F E 104 ? F 113 ? 20 1 1 E DT 5 1_555 F DA 4 1_555 -0.172 -0.072 0.112 -7.268 -11.929 1.541 13 E_DT105:DA112_F E 105 ? F 112 ? 20 1 1 E DC 6 1_555 F DG 3 1_555 0.247 -0.067 0.151 4.177 -2.560 1.130 14 E_DC106:DG111_F E 106 ? F 111 ? 19 1 1 E DG 7 1_555 F DC 2 1_555 -0.287 -0.266 0.456 8.377 -7.531 -2.235 15 E_DG107:DC110_F E 107 ? F 110 ? 19 1 1 E DC 8 1_555 F DG 1 1_555 0.397 -0.195 0.007 6.161 -3.155 0.270 16 E_DC108:DG109_F E 108 ? F 109 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DG 1 1_555 D DC 8 1_555 C DC 2 1_555 D DG 7 1_555 -0.655 0.039 3.134 -2.513 0.644 33.767 -0.032 0.733 3.173 1.107 4.319 33.864 1 CC_DG101DC102:DG115DC116_DD C 101 ? D 116 ? C 102 ? D 115 ? 1 C DC 2 1_555 D DG 7 1_555 C DG 3 1_555 D DC 6 1_555 -0.181 0.882 3.011 -0.700 9.488 22.950 -0.744 0.215 3.126 22.638 1.670 24.819 2 CC_DC102DG103:DC114DG115_DD C 102 ? D 115 ? C 103 ? D 114 ? 1 C DG 3 1_555 D DC 6 1_555 C DA 4 1_555 D DT 5 1_555 -0.549 1.337 6.022 -0.017 49.842 20.193 -5.581 0.607 3.576 69.329 0.024 53.534 3 CC_DG103DA104:DT113DC114_DD C 103 ? D 114 ? C 104 ? D 113 ? 1 C DA 4 1_555 D DT 5 1_555 C DT 5 1_555 D DA 4 1_555 -0.338 -0.162 3.078 -2.932 5.056 22.977 -1.973 -0.092 2.993 12.435 7.212 23.699 4 CC_DA104DT105:DA112DT113_DD C 104 ? D 113 ? C 105 ? D 112 ? 1 C DT 5 1_555 D DA 4 1_555 C DC 6 1_555 D DG 3 1_555 -0.254 0.823 3.218 1.097 12.403 24.107 -1.525 0.833 3.230 27.475 -2.431 27.091 5 CC_DT105DC106:DG111DA112_DD C 105 ? D 112 ? C 106 ? D 111 ? 1 C DC 6 1_555 D DG 3 1_555 C DG 7 1_555 D DC 2 1_555 -0.156 1.901 3.308 -1.193 -5.042 44.495 2.945 0.098 3.088 -6.632 1.569 44.781 6 CC_DC106DG107:DC110DG111_DD C 106 ? D 111 ? C 107 ? D 110 ? 1 C DG 7 1_555 D DC 2 1_555 C DC 8 1_555 D DG 1 1_555 0.760 -0.033 3.332 3.583 -3.034 37.775 0.346 -0.697 3.380 -4.664 -5.509 38.055 7 CC_DG107DC108:DG109DC110_DD C 107 ? D 110 ? C 108 ? D 109 ? 1 E DG 1 1_555 F DC 8 1_555 E DC 2 1_555 F DG 7 1_555 -0.667 0.043 3.124 -3.053 0.581 33.454 -0.018 0.672 3.171 1.007 5.290 33.594 8 EE_DG101DC102:DG115DC116_FF E 101 ? F 116 ? E 102 ? F 115 ? 1 E DC 2 1_555 F DG 7 1_555 E DG 3 1_555 F DC 6 1_555 -0.201 0.881 3.019 -0.680 9.073 23.327 -0.595 0.266 3.138 21.422 1.605 25.016 9 EE_DC102DG103:DC114DG115_FF E 102 ? F 115 ? E 103 ? F 114 ? 1 E DG 3 1_555 F DC 6 1_555 E DA 4 1_555 F DT 5 1_555 -0.527 1.347 6.043 0.045 49.971 20.004 -5.609 0.591 3.571 69.559 -0.063 53.586 10 EE_DG103DA104:DT113DC114_FF E 103 ? F 114 ? E 104 ? F 113 ? 1 E DA 4 1_555 F DT 5 1_555 E DT 5 1_555 F DA 4 1_555 -0.318 -0.157 3.062 -2.929 4.714 23.074 -1.844 -0.134 2.987 11.571 7.191 23.723 11 EE_DA104DT105:DA112DT113_FF E 104 ? F 113 ? E 105 ? F 112 ? 1 E DT 5 1_555 F DA 4 1_555 E DC 6 1_555 F DG 3 1_555 -0.249 0.843 3.208 1.748 12.539 23.818 -1.543 1.003 3.214 27.990 -3.902 26.930 12 EE_DT105DC106:DG111DA112_FF E 105 ? F 112 ? E 106 ? F 111 ? 1 E DC 6 1_555 F DG 3 1_555 E DG 7 1_555 F DC 2 1_555 -0.123 1.916 3.275 -1.520 -5.328 44.624 2.973 0.028 3.041 -6.984 1.993 44.949 13 EE_DC106DG107:DC110DG111_FF E 106 ? F 111 ? E 107 ? F 110 ? 1 E DG 7 1_555 F DC 2 1_555 E DC 8 1_555 F DG 1 1_555 0.810 -0.044 3.372 4.073 -3.193 38.018 0.349 -0.701 3.430 -4.873 -6.217 38.355 14 EE_DG107DC108:DG109DC110_FF E 107 ? F 110 ? E 108 ? F 109 ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2JTM _pdbx_initial_refinement_model.details 'PDB ENTRY 2JTM' #