data_3LWX # _entry.id 3LWX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3LWX pdb_00003lwx 10.2210/pdb3lwx/pdb RCSB RCSB057832 ? ? WWPDB D_1000057832 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 405115 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3LWX _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-02-24 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Crystal structure of Na(+)-translocating NADH-quinone reductase subunit C (YP_001302508.1) from Parabacteroides distasonis ATCC 8503 at 1.10 A resolution ; _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3LWX _cell.length_a 37.444 _cell.length_b 60.693 _cell.length_c 82.758 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3LWX _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'NADH:ubiquinone oxidoreductase, Na translocating, C subunit' 21820.781 1 ? ? 'sequence database residues 73-270' ? 2 non-polymer syn GLYCEROL 92.094 3 ? ? ? ? 3 water nat water 18.015 370 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GQSLRSFQKQNEDNDKRQQILRSINVNVSSSEAETKYNELIKEAFLVNENGEKVEGDAFATDVVKAATEHQYPVFVANVD GQPKYI(MSE)ALHGAGLWGPLWGYISVDSDKNTIYGADFSHQGETPGLGAEISKPVFSNEFKGKKIF(MSE)SGEFKSV AVVKPGKSVAGQDYVDGISGGTITSKGVDE(MSE)LFNSLSGYVKFLTSQN ; _entity_poly.pdbx_seq_one_letter_code_can ;GQSLRSFQKQNEDNDKRQQILRSINVNVSSSEAETKYNELIKEAFLVNENGEKVEGDAFATDVVKAATEHQYPVFVANVD GQPKYIMALHGAGLWGPLWGYISVDSDKNTIYGADFSHQGETPGLGAEISKPVFSNEFKGKKIFMSGEFKSVAVVKPGKS VAGQDYVDGISGGTITSKGVDEMLFNSLSGYVKFLTSQN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 405115 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLN n 1 3 SER n 1 4 LEU n 1 5 ARG n 1 6 SER n 1 7 PHE n 1 8 GLN n 1 9 LYS n 1 10 GLN n 1 11 ASN n 1 12 GLU n 1 13 ASP n 1 14 ASN n 1 15 ASP n 1 16 LYS n 1 17 ARG n 1 18 GLN n 1 19 GLN n 1 20 ILE n 1 21 LEU n 1 22 ARG n 1 23 SER n 1 24 ILE n 1 25 ASN n 1 26 VAL n 1 27 ASN n 1 28 VAL n 1 29 SER n 1 30 SER n 1 31 SER n 1 32 GLU n 1 33 ALA n 1 34 GLU n 1 35 THR n 1 36 LYS n 1 37 TYR n 1 38 ASN n 1 39 GLU n 1 40 LEU n 1 41 ILE n 1 42 LYS n 1 43 GLU n 1 44 ALA n 1 45 PHE n 1 46 LEU n 1 47 VAL n 1 48 ASN n 1 49 GLU n 1 50 ASN n 1 51 GLY n 1 52 GLU n 1 53 LYS n 1 54 VAL n 1 55 GLU n 1 56 GLY n 1 57 ASP n 1 58 ALA n 1 59 PHE n 1 60 ALA n 1 61 THR n 1 62 ASP n 1 63 VAL n 1 64 VAL n 1 65 LYS n 1 66 ALA n 1 67 ALA n 1 68 THR n 1 69 GLU n 1 70 HIS n 1 71 GLN n 1 72 TYR n 1 73 PRO n 1 74 VAL n 1 75 PHE n 1 76 VAL n 1 77 ALA n 1 78 ASN n 1 79 VAL n 1 80 ASP n 1 81 GLY n 1 82 GLN n 1 83 PRO n 1 84 LYS n 1 85 TYR n 1 86 ILE n 1 87 MSE n 1 88 ALA n 1 89 LEU n 1 90 HIS n 1 91 GLY n 1 92 ALA n 1 93 GLY n 1 94 LEU n 1 95 TRP n 1 96 GLY n 1 97 PRO n 1 98 LEU n 1 99 TRP n 1 100 GLY n 1 101 TYR n 1 102 ILE n 1 103 SER n 1 104 VAL n 1 105 ASP n 1 106 SER n 1 107 ASP n 1 108 LYS n 1 109 ASN n 1 110 THR n 1 111 ILE n 1 112 TYR n 1 113 GLY n 1 114 ALA n 1 115 ASP n 1 116 PHE n 1 117 SER n 1 118 HIS n 1 119 GLN n 1 120 GLY n 1 121 GLU n 1 122 THR n 1 123 PRO n 1 124 GLY n 1 125 LEU n 1 126 GLY n 1 127 ALA n 1 128 GLU n 1 129 ILE n 1 130 SER n 1 131 LYS n 1 132 PRO n 1 133 VAL n 1 134 PHE n 1 135 SER n 1 136 ASN n 1 137 GLU n 1 138 PHE n 1 139 LYS n 1 140 GLY n 1 141 LYS n 1 142 LYS n 1 143 ILE n 1 144 PHE n 1 145 MSE n 1 146 SER n 1 147 GLY n 1 148 GLU n 1 149 PHE n 1 150 LYS n 1 151 SER n 1 152 VAL n 1 153 ALA n 1 154 VAL n 1 155 VAL n 1 156 LYS n 1 157 PRO n 1 158 GLY n 1 159 LYS n 1 160 SER n 1 161 VAL n 1 162 ALA n 1 163 GLY n 1 164 GLN n 1 165 ASP n 1 166 TYR n 1 167 VAL n 1 168 ASP n 1 169 GLY n 1 170 ILE n 1 171 SER n 1 172 GLY n 1 173 GLY n 1 174 THR n 1 175 ILE n 1 176 THR n 1 177 SER n 1 178 LYS n 1 179 GLY n 1 180 VAL n 1 181 ASP n 1 182 GLU n 1 183 MSE n 1 184 LEU n 1 185 PHE n 1 186 ASN n 1 187 SER n 1 188 LEU n 1 189 SER n 1 190 GLY n 1 191 TYR n 1 192 VAL n 1 193 LYS n 1 194 PHE n 1 195 LEU n 1 196 THR n 1 197 SER n 1 198 GLN n 1 199 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene BDI_1123 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 8503 / DSM 20701 / NCTC 11152' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Parabacteroides distasonis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 435591 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A6LB22_PARD8 _struct_ref.pdbx_db_accession A6LB22 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QSLRSFQKQNEDNDKRQQILRSINVNVSSSEAETKYNELIKEAFLVNENGEKVEGDAFATDVVKAATEHQYPVFVANVDG QPKYIMALHGAGLWGPLWGYISVDSDKNTIYGADFSHQGETPGLGAEISKPVFSNEFKGKKIFMSGEFKSVAVVKPGKSV AGQDYVDGISGGTITSKGVDEMLFNSLSGYVKFLTSQN ; _struct_ref.pdbx_align_begin 73 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3LWX _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 199 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A6LB22 _struct_ref_seq.db_align_beg 73 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 270 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 73 _struct_ref_seq.pdbx_auth_seq_align_end 270 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3LWX _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code A6LB22 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3LWX # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.15 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 42.92 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '15.0000% Glycerol, 0.1700M NaOAc, 25.5000% PEG-4000, 0.1M TRIS pH 8.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat collimating mirror, toroid focusing mirror' _diffrn_detector.pdbx_collection_date 2010-01-25 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97861 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_wavelength 0.97861 _diffrn_source.pdbx_wavelength_list ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3LWX _reflns.d_resolution_high 1.10 _reflns.d_resolution_low 29.739 _reflns.number_obs 74185 _reflns.pdbx_Rmerge_I_obs 0.041 _reflns.pdbx_netI_over_sigmaI 14.690 _reflns.percent_possible_obs 95.200 _reflns.B_iso_Wilson_estimate 7.951 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 1.10 1.14 33755 ? 13515 0.534 2.2 ? ? ? ? ? 89.90 ? 1 1.14 1.18 30531 ? 12058 0.405 2.8 ? ? ? ? ? 92.60 ? 2 1.18 1.24 39522 ? 15520 0.342 3.3 ? ? ? ? ? 93.40 ? 3 1.24 1.30 32994 ? 12933 0.268 4.3 ? ? ? ? ? 94.60 ? 4 1.30 1.39 39554 ? 15425 0.194 5.7 ? ? ? ? ? 94.80 ? 5 1.39 1.49 33871 ? 13211 0.135 7.8 ? ? ? ? ? 95.70 ? 6 1.49 1.64 36907 ? 14340 0.080 11.8 ? ? ? ? ? 96.40 ? 7 1.64 1.88 44179 ? 14632 0.054 18.6 ? ? ? ? ? 97.30 ? 8 1.88 2.37 62672 ? 14612 0.032 35.5 ? ? ? ? ? 98.40 ? 9 2.37 29.739 64769 ? 14688 0.025 50.9 ? ? ? ? ? 99.10 ? 10 # _refine.entry_id 3LWX _refine.ls_d_res_high 1.100 _refine.ls_d_res_low 29.739 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 96.000 _refine.ls_number_reflns_obs 74143 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1.HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3. GLYCEROL (GOL) FROM THE CRYSTALLIZATION SOLUTION WERE MODELED INTO THE STRUCTURE. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.117 _refine.ls_R_factor_R_work 0.116 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.138 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 3700 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 13.424 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.220 _refine.aniso_B[2][2] 0.340 _refine.aniso_B[3][3] -0.550 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.984 _refine.correlation_coeff_Fo_to_Fc_free 0.978 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.028 _refine.pdbx_overall_ESU_R_Free 0.028 _refine.overall_SU_ML 0.017 _refine.overall_SU_B 0.806 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 45.59 _refine.B_iso_min 5.82 _refine.occupancy_max 1.00 _refine.occupancy_min 0.20 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1803 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 24 _refine_hist.number_atoms_solvent 411 _refine_hist.number_atoms_total 2238 _refine_hist.d_res_high 1.100 _refine_hist.d_res_low 29.739 # loop_ _refine_ls_restr.type _refine_ls_restr.pdbx_refine_id _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 'X-RAY DIFFRACTION' 1905 0.010 0.022 ? ? r_bond_other_d 'X-RAY DIFFRACTION' 1320 0.001 0.020 ? ? r_angle_refined_deg 'X-RAY DIFFRACTION' 2638 1.474 1.965 ? ? r_angle_other_deg 'X-RAY DIFFRACTION' 3308 1.647 3.000 ? ? r_dihedral_angle_1_deg 'X-RAY DIFFRACTION' 286 4.249 5.000 ? ? r_dihedral_angle_2_deg 'X-RAY DIFFRACTION' 86 33.210 26.279 ? ? r_dihedral_angle_3_deg 'X-RAY DIFFRACTION' 355 10.886 15.000 ? ? r_dihedral_angle_4_deg 'X-RAY DIFFRACTION' 4 9.216 15.000 ? ? r_chiral_restr 'X-RAY DIFFRACTION' 290 0.070 0.200 ? ? r_gen_planes_refined 'X-RAY DIFFRACTION' 2241 0.007 0.020 ? ? r_gen_planes_other 'X-RAY DIFFRACTION' 365 0.003 0.020 ? ? r_mcbond_it 'X-RAY DIFFRACTION' 1173 1.474 2.000 ? ? r_mcbond_other 'X-RAY DIFFRACTION' 478 0.859 2.000 ? ? r_mcangle_it 'X-RAY DIFFRACTION' 1944 2.356 4.000 ? ? r_scbond_it 'X-RAY DIFFRACTION' 732 3.710 6.000 ? ? r_scangle_it 'X-RAY DIFFRACTION' 654 5.354 8.000 ? ? r_rigid_bond_restr 'X-RAY DIFFRACTION' 3225 1.159 3.000 ? ? # _refine_ls_shell.d_res_high 1.100 _refine_ls_shell.d_res_low 1.129 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 91.530 _refine_ls_shell.number_reflns_R_work 4887 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.193 _refine_ls_shell.R_factor_R_free 0.197 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 256 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 5143 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3LWX _struct.title ;Crystal structure of Na(+)-translocating NADH-quinone reductase subunit C (YP_001302508.1) from Parabacteroides distasonis ATCC 8503 at 1.10 A resolution ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;Na(+)-translocating NADH-quinone reductase subunit C, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, Transport, Ubiquinone, OXIDOREDUCTASE ; _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.entry_id 3LWX # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 3 ? ILE A 24 ? SER A 74 ILE A 95 1 ? 22 HELX_P HELX_P2 2 SER A 29 ? LEU A 40 ? SER A 100 LEU A 111 1 ? 12 HELX_P HELX_P3 3 ASP A 62 ? GLU A 69 ? ASP A 133 GLU A 140 1 ? 8 HELX_P HELX_P4 4 LEU A 125 ? SER A 130 ? LEU A 196 SER A 201 5 ? 6 HELX_P HELX_P5 5 LYS A 131 ? ASN A 136 ? LYS A 202 ASN A 207 1 ? 6 HELX_P HELX_P6 6 GLU A 137 ? LYS A 139 ? GLU A 208 LYS A 210 5 ? 3 HELX_P HELX_P7 7 GLY A 173 ? SER A 197 ? GLY A 244 SER A 268 1 ? 25 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ILE 86 C ? ? ? 1_555 A MSE 87 N ? ? A ILE 157 A MSE 158 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale2 covale both ? A MSE 87 C ? ? ? 1_555 A ALA 88 N ? ? A MSE 158 A ALA 159 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale3 covale both ? A PHE 144 C ? ? ? 1_555 A MSE 145 N ? ? A PHE 215 A MSE 216 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale4 covale both ? A MSE 145 C ? ? ? 1_555 A SER 146 N ? ? A MSE 216 A SER 217 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale5 covale both ? A GLU 182 C ? ? ? 1_555 A MSE 183 N ? ? A GLU 253 A MSE 254 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale6 covale both ? A MSE 183 C ? ? ? 1_555 A LEU 184 N ? ? A MSE 254 A LEU 255 1_555 ? ? ? ? ? ? ? 1.326 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 2 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 53 ? VAL A 54 ? LYS A 124 VAL A 125 A 2 ILE A 41 ? ASN A 48 ? ILE A 112 ASN A 119 A 3 GLN A 71 ? VAL A 79 ? GLN A 142 VAL A 150 A 4 GLN A 82 ? ALA A 92 ? GLN A 153 ALA A 163 A 5 PRO A 97 ? VAL A 104 ? PRO A 168 VAL A 175 A 6 ILE A 111 ? HIS A 118 ? ILE A 182 HIS A 189 B 1 PHE A 144 ? MSE A 145 ? PHE A 215 MSE A 216 B 2 GLU A 148 ? PHE A 149 ? GLU A 219 PHE A 220 C 1 ALA A 153 ? VAL A 155 ? ALA A 224 VAL A 226 C 2 TYR A 166 ? ASP A 168 ? TYR A 237 ASP A 239 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 54 ? O VAL A 125 N LEU A 46 ? N LEU A 117 A 2 3 N PHE A 45 ? N PHE A 116 O VAL A 74 ? O VAL A 145 A 3 4 N PHE A 75 ? N PHE A 146 O ILE A 86 ? O ILE A 157 A 4 5 N LEU A 89 ? N LEU A 160 O GLY A 100 ? O GLY A 171 A 5 6 N TRP A 99 ? N TRP A 170 O SER A 117 ? O SER A 188 B 1 2 N MSE A 145 ? N MSE A 216 O GLU A 148 ? O GLU A 219 C 1 2 N VAL A 155 ? N VAL A 226 O VAL A 167 ? O VAL A 238 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GOL 271 ? 9 'BINDING SITE FOR RESIDUE GOL A 271' AC2 Software A GOL 272 ? 14 'BINDING SITE FOR RESIDUE GOL A 272' AC3 Software A GOL 273 ? 7 'BINDING SITE FOR RESIDUE GOL A 273' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 TYR A 85 ? TYR A 156 . ? 2_674 ? 2 AC1 9 TRP A 95 ? TRP A 166 . ? 1_555 ? 3 AC1 9 HOH E . ? HOH A 295 . ? 2_674 ? 4 AC1 9 HOH E . ? HOH A 302 . ? 1_555 ? 5 AC1 9 HOH E . ? HOH A 330 . ? 1_555 ? 6 AC1 9 HOH E . ? HOH A 403 . ? 2_674 ? 7 AC1 9 HOH E . ? HOH A 551 . ? 4_475 ? 8 AC1 9 HOH E . ? HOH A 592 . ? 2_674 ? 9 AC1 9 HOH E . ? HOH A 609 . ? 1_555 ? 10 AC2 14 LYS A 36 ? LYS A 107 . ? 3_645 ? 11 AC2 14 GLU A 39 ? GLU A 110 . ? 3_645 ? 12 AC2 14 ASP A 107 ? ASP A 178 . ? 1_555 ? 13 AC2 14 LYS A 108 ? LYS A 179 . ? 1_555 ? 14 AC2 14 ASN A 109 ? ASN A 180 . ? 1_555 ? 15 AC2 14 PHE A 144 ? PHE A 215 . ? 1_555 ? 16 AC2 14 LEU A 195 ? LEU A 266 . ? 1_555 ? 17 AC2 14 THR A 196 ? THR A 267 . ? 1_555 ? 18 AC2 14 HOH E . ? HOH A 292 . ? 1_555 ? 19 AC2 14 HOH E . ? HOH A 327 . ? 3_645 ? 20 AC2 14 HOH E . ? HOH A 329 . ? 1_555 ? 21 AC2 14 HOH E . ? HOH A 473 . ? 3_645 ? 22 AC2 14 HOH E . ? HOH A 522 . ? 3_645 ? 23 AC2 14 HOH E . ? HOH A 586 . ? 1_555 ? 24 AC3 7 GLN A 164 ? GLN A 235 . ? 1_555 ? 25 AC3 7 ASP A 181 ? ASP A 252 . ? 1_555 ? 26 AC3 7 PHE A 185 ? PHE A 256 . ? 1_555 ? 27 AC3 7 HOH E . ? HOH A 301 . ? 1_555 ? 28 AC3 7 HOH E . ? HOH A 308 . ? 1_555 ? 29 AC3 7 HOH E . ? HOH A 411 . ? 1_555 ? 30 AC3 7 HOH E . ? HOH A 418 . ? 1_555 ? # _atom_sites.entry_id 3LWX _atom_sites.fract_transf_matrix[1][1] 0.026707 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016476 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012083 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 0 GLY GLY A . n A 1 2 GLN 2 73 73 GLN GLN A . n A 1 3 SER 3 74 74 SER SER A . n A 1 4 LEU 4 75 75 LEU LEU A . n A 1 5 ARG 5 76 76 ARG ARG A . n A 1 6 SER 6 77 77 SER SER A . n A 1 7 PHE 7 78 78 PHE PHE A . n A 1 8 GLN 8 79 79 GLN GLN A . n A 1 9 LYS 9 80 80 LYS LYS A . n A 1 10 GLN 10 81 81 GLN GLN A . n A 1 11 ASN 11 82 82 ASN ASN A . n A 1 12 GLU 12 83 83 GLU GLU A . n A 1 13 ASP 13 84 84 ASP ASP A . n A 1 14 ASN 14 85 85 ASN ASN A . n A 1 15 ASP 15 86 86 ASP ASP A . n A 1 16 LYS 16 87 87 LYS LYS A . n A 1 17 ARG 17 88 88 ARG ARG A . n A 1 18 GLN 18 89 89 GLN GLN A . n A 1 19 GLN 19 90 90 GLN GLN A . n A 1 20 ILE 20 91 91 ILE ILE A . n A 1 21 LEU 21 92 92 LEU LEU A . n A 1 22 ARG 22 93 93 ARG ARG A . n A 1 23 SER 23 94 94 SER SER A . n A 1 24 ILE 24 95 95 ILE ILE A . n A 1 25 ASN 25 96 96 ASN ASN A . n A 1 26 VAL 26 97 97 VAL VAL A . n A 1 27 ASN 27 98 98 ASN ASN A . n A 1 28 VAL 28 99 99 VAL VAL A . n A 1 29 SER 29 100 100 SER SER A . n A 1 30 SER 30 101 101 SER SER A . n A 1 31 SER 31 102 102 SER SER A . n A 1 32 GLU 32 103 103 GLU GLU A . n A 1 33 ALA 33 104 104 ALA ALA A . n A 1 34 GLU 34 105 105 GLU GLU A . n A 1 35 THR 35 106 106 THR THR A . n A 1 36 LYS 36 107 107 LYS LYS A . n A 1 37 TYR 37 108 108 TYR TYR A . n A 1 38 ASN 38 109 109 ASN ASN A . n A 1 39 GLU 39 110 110 GLU GLU A . n A 1 40 LEU 40 111 111 LEU LEU A . n A 1 41 ILE 41 112 112 ILE ILE A . n A 1 42 LYS 42 113 113 LYS LYS A . n A 1 43 GLU 43 114 114 GLU GLU A . n A 1 44 ALA 44 115 115 ALA ALA A . n A 1 45 PHE 45 116 116 PHE PHE A . n A 1 46 LEU 46 117 117 LEU LEU A . n A 1 47 VAL 47 118 118 VAL VAL A . n A 1 48 ASN 48 119 119 ASN ASN A . n A 1 49 GLU 49 120 120 GLU GLU A . n A 1 50 ASN 50 121 121 ASN ASN A . n A 1 51 GLY 51 122 122 GLY GLY A . n A 1 52 GLU 52 123 123 GLU GLU A . n A 1 53 LYS 53 124 124 LYS LYS A . n A 1 54 VAL 54 125 125 VAL VAL A . n A 1 55 GLU 55 126 126 GLU GLU A . n A 1 56 GLY 56 127 127 GLY GLY A . n A 1 57 ASP 57 128 128 ASP ASP A . n A 1 58 ALA 58 129 129 ALA ALA A . n A 1 59 PHE 59 130 130 PHE PHE A . n A 1 60 ALA 60 131 131 ALA ALA A . n A 1 61 THR 61 132 132 THR THR A . n A 1 62 ASP 62 133 133 ASP ASP A . n A 1 63 VAL 63 134 134 VAL VAL A . n A 1 64 VAL 64 135 135 VAL VAL A . n A 1 65 LYS 65 136 136 LYS LYS A . n A 1 66 ALA 66 137 137 ALA ALA A . n A 1 67 ALA 67 138 138 ALA ALA A . n A 1 68 THR 68 139 139 THR THR A . n A 1 69 GLU 69 140 140 GLU GLU A . n A 1 70 HIS 70 141 141 HIS HIS A . n A 1 71 GLN 71 142 142 GLN GLN A . n A 1 72 TYR 72 143 143 TYR TYR A . n A 1 73 PRO 73 144 144 PRO PRO A . n A 1 74 VAL 74 145 145 VAL VAL A . n A 1 75 PHE 75 146 146 PHE PHE A . n A 1 76 VAL 76 147 147 VAL VAL A . n A 1 77 ALA 77 148 148 ALA ALA A . n A 1 78 ASN 78 149 149 ASN ASN A . n A 1 79 VAL 79 150 150 VAL VAL A . n A 1 80 ASP 80 151 151 ASP ASP A . n A 1 81 GLY 81 152 152 GLY GLY A . n A 1 82 GLN 82 153 153 GLN GLN A . n A 1 83 PRO 83 154 154 PRO PRO A . n A 1 84 LYS 84 155 155 LYS LYS A . n A 1 85 TYR 85 156 156 TYR TYR A . n A 1 86 ILE 86 157 157 ILE ILE A . n A 1 87 MSE 87 158 158 MSE MSE A . n A 1 88 ALA 88 159 159 ALA ALA A . n A 1 89 LEU 89 160 160 LEU LEU A . n A 1 90 HIS 90 161 161 HIS HIS A . n A 1 91 GLY 91 162 162 GLY GLY A . n A 1 92 ALA 92 163 163 ALA ALA A . n A 1 93 GLY 93 164 164 GLY GLY A . n A 1 94 LEU 94 165 165 LEU LEU A . n A 1 95 TRP 95 166 166 TRP TRP A . n A 1 96 GLY 96 167 167 GLY GLY A . n A 1 97 PRO 97 168 168 PRO PRO A . n A 1 98 LEU 98 169 169 LEU LEU A . n A 1 99 TRP 99 170 170 TRP TRP A . n A 1 100 GLY 100 171 171 GLY GLY A . n A 1 101 TYR 101 172 172 TYR TYR A . n A 1 102 ILE 102 173 173 ILE ILE A . n A 1 103 SER 103 174 174 SER SER A . n A 1 104 VAL 104 175 175 VAL VAL A . n A 1 105 ASP 105 176 176 ASP ASP A . n A 1 106 SER 106 177 177 SER SER A . n A 1 107 ASP 107 178 178 ASP ASP A . n A 1 108 LYS 108 179 179 LYS LYS A . n A 1 109 ASN 109 180 180 ASN ASN A . n A 1 110 THR 110 181 181 THR THR A . n A 1 111 ILE 111 182 182 ILE ILE A . n A 1 112 TYR 112 183 183 TYR TYR A . n A 1 113 GLY 113 184 184 GLY GLY A . n A 1 114 ALA 114 185 185 ALA ALA A . n A 1 115 ASP 115 186 186 ASP ASP A . n A 1 116 PHE 116 187 187 PHE PHE A . n A 1 117 SER 117 188 188 SER SER A . n A 1 118 HIS 118 189 189 HIS HIS A . n A 1 119 GLN 119 190 190 GLN GLN A . n A 1 120 GLY 120 191 191 GLY GLY A . n A 1 121 GLU 121 192 192 GLU GLU A . n A 1 122 THR 122 193 193 THR THR A . n A 1 123 PRO 123 194 194 PRO PRO A . n A 1 124 GLY 124 195 195 GLY GLY A . n A 1 125 LEU 125 196 196 LEU LEU A . n A 1 126 GLY 126 197 197 GLY GLY A . n A 1 127 ALA 127 198 198 ALA ALA A . n A 1 128 GLU 128 199 199 GLU GLU A . n A 1 129 ILE 129 200 200 ILE ILE A . n A 1 130 SER 130 201 201 SER SER A . n A 1 131 LYS 131 202 202 LYS LYS A . n A 1 132 PRO 132 203 203 PRO PRO A . n A 1 133 VAL 133 204 204 VAL VAL A . n A 1 134 PHE 134 205 205 PHE PHE A . n A 1 135 SER 135 206 206 SER SER A . n A 1 136 ASN 136 207 207 ASN ASN A . n A 1 137 GLU 137 208 208 GLU GLU A . n A 1 138 PHE 138 209 209 PHE PHE A . n A 1 139 LYS 139 210 210 LYS LYS A . n A 1 140 GLY 140 211 211 GLY GLY A . n A 1 141 LYS 141 212 212 LYS LYS A . n A 1 142 LYS 142 213 213 LYS LYS A . n A 1 143 ILE 143 214 214 ILE ILE A . n A 1 144 PHE 144 215 215 PHE PHE A . n A 1 145 MSE 145 216 216 MSE MSE A . n A 1 146 SER 146 217 217 SER SER A . n A 1 147 GLY 147 218 218 GLY GLY A . n A 1 148 GLU 148 219 219 GLU GLU A . n A 1 149 PHE 149 220 220 PHE PHE A . n A 1 150 LYS 150 221 221 LYS LYS A . n A 1 151 SER 151 222 222 SER SER A . n A 1 152 VAL 152 223 223 VAL VAL A . n A 1 153 ALA 153 224 224 ALA ALA A . n A 1 154 VAL 154 225 225 VAL VAL A . n A 1 155 VAL 155 226 226 VAL VAL A . n A 1 156 LYS 156 227 227 LYS LYS A . n A 1 157 PRO 157 228 228 PRO PRO A . n A 1 158 GLY 158 229 229 GLY GLY A . n A 1 159 LYS 159 230 230 LYS LYS A . n A 1 160 SER 160 231 231 SER SER A . n A 1 161 VAL 161 232 232 VAL VAL A . n A 1 162 ALA 162 233 233 ALA ALA A . n A 1 163 GLY 163 234 234 GLY GLY A . n A 1 164 GLN 164 235 235 GLN GLN A . n A 1 165 ASP 165 236 236 ASP ASP A . n A 1 166 TYR 166 237 237 TYR TYR A . n A 1 167 VAL 167 238 238 VAL VAL A . n A 1 168 ASP 168 239 239 ASP ASP A . n A 1 169 GLY 169 240 240 GLY GLY A . n A 1 170 ILE 170 241 241 ILE ILE A . n A 1 171 SER 171 242 242 SER SER A . n A 1 172 GLY 172 243 243 GLY GLY A . n A 1 173 GLY 173 244 244 GLY GLY A . n A 1 174 THR 174 245 245 THR THR A . n A 1 175 ILE 175 246 246 ILE ILE A . n A 1 176 THR 176 247 247 THR THR A . n A 1 177 SER 177 248 248 SER SER A . n A 1 178 LYS 178 249 249 LYS LYS A . n A 1 179 GLY 179 250 250 GLY GLY A . n A 1 180 VAL 180 251 251 VAL VAL A . n A 1 181 ASP 181 252 252 ASP ASP A . n A 1 182 GLU 182 253 253 GLU GLU A . n A 1 183 MSE 183 254 254 MSE MSE A . n A 1 184 LEU 184 255 255 LEU LEU A . n A 1 185 PHE 185 256 256 PHE PHE A . n A 1 186 ASN 186 257 257 ASN ASN A . n A 1 187 SER 187 258 258 SER SER A . n A 1 188 LEU 188 259 259 LEU LEU A . n A 1 189 SER 189 260 260 SER SER A . n A 1 190 GLY 190 261 261 GLY GLY A . n A 1 191 TYR 191 262 262 TYR TYR A . n A 1 192 VAL 192 263 263 VAL VAL A . n A 1 193 LYS 193 264 264 LYS LYS A . n A 1 194 PHE 194 265 265 PHE PHE A . n A 1 195 LEU 195 266 266 LEU LEU A . n A 1 196 THR 196 267 267 THR THR A . n A 1 197 SER 197 268 268 SER SER A . n A 1 198 GLN 198 269 269 GLN GLN A . n A 1 199 ASN 199 270 270 ASN ASN A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL 1 271 271 GOL GOL A . C 2 GOL 1 272 272 GOL GOL A . D 2 GOL 1 273 273 GOL GOL A . E 3 HOH 1 274 274 HOH HOH A . E 3 HOH 2 275 275 HOH HOH A . E 3 HOH 3 276 276 HOH HOH A . E 3 HOH 4 277 277 HOH HOH A . E 3 HOH 5 278 278 HOH HOH A . E 3 HOH 6 279 279 HOH HOH A . E 3 HOH 7 280 280 HOH HOH A . E 3 HOH 8 281 281 HOH HOH A . E 3 HOH 9 282 282 HOH HOH A . E 3 HOH 10 283 283 HOH HOH A . E 3 HOH 11 284 284 HOH HOH A . E 3 HOH 12 285 285 HOH HOH A . E 3 HOH 13 286 286 HOH HOH A . E 3 HOH 14 287 287 HOH HOH A . E 3 HOH 15 288 288 HOH HOH A . E 3 HOH 16 289 289 HOH HOH A . E 3 HOH 17 290 290 HOH HOH A . E 3 HOH 18 291 291 HOH HOH A . E 3 HOH 19 292 292 HOH HOH A . E 3 HOH 20 293 293 HOH HOH A . E 3 HOH 21 294 294 HOH HOH A . E 3 HOH 22 295 295 HOH HOH A . E 3 HOH 23 296 296 HOH HOH A . E 3 HOH 24 297 297 HOH HOH A . E 3 HOH 25 298 298 HOH HOH A . E 3 HOH 26 299 299 HOH HOH A . E 3 HOH 27 300 300 HOH HOH A . E 3 HOH 28 301 301 HOH HOH A . E 3 HOH 29 302 302 HOH HOH A . E 3 HOH 30 303 303 HOH HOH A . E 3 HOH 31 304 304 HOH HOH A . E 3 HOH 32 305 305 HOH HOH A . E 3 HOH 33 306 306 HOH HOH A . E 3 HOH 34 307 307 HOH HOH A . E 3 HOH 35 308 308 HOH HOH A . E 3 HOH 36 309 309 HOH HOH A . E 3 HOH 37 310 310 HOH HOH A . E 3 HOH 38 311 311 HOH HOH A . E 3 HOH 39 312 312 HOH HOH A . E 3 HOH 40 313 313 HOH HOH A . E 3 HOH 41 314 314 HOH HOH A . E 3 HOH 42 315 315 HOH HOH A . E 3 HOH 43 316 316 HOH HOH A . E 3 HOH 44 317 317 HOH HOH A . E 3 HOH 45 318 318 HOH HOH A . E 3 HOH 46 319 319 HOH HOH A . E 3 HOH 47 320 320 HOH HOH A . E 3 HOH 48 321 321 HOH HOH A . E 3 HOH 49 322 322 HOH HOH A . E 3 HOH 50 323 323 HOH HOH A . E 3 HOH 51 324 324 HOH HOH A . E 3 HOH 52 325 325 HOH HOH A . E 3 HOH 53 326 326 HOH HOH A . E 3 HOH 54 327 327 HOH HOH A . E 3 HOH 55 328 328 HOH HOH A . E 3 HOH 56 329 329 HOH HOH A . E 3 HOH 57 330 330 HOH HOH A . E 3 HOH 58 331 331 HOH HOH A . E 3 HOH 59 332 332 HOH HOH A . E 3 HOH 60 333 333 HOH HOH A . E 3 HOH 61 334 334 HOH HOH A . E 3 HOH 62 335 335 HOH HOH A . E 3 HOH 63 336 336 HOH HOH A . E 3 HOH 64 337 337 HOH HOH A . E 3 HOH 65 338 338 HOH HOH A . E 3 HOH 66 339 339 HOH HOH A . E 3 HOH 67 340 340 HOH HOH A . E 3 HOH 68 341 341 HOH HOH A . E 3 HOH 69 342 342 HOH HOH A . E 3 HOH 70 343 343 HOH HOH A . E 3 HOH 71 344 344 HOH HOH A . E 3 HOH 72 345 345 HOH HOH A . E 3 HOH 73 346 346 HOH HOH A . E 3 HOH 74 347 347 HOH HOH A . E 3 HOH 75 348 348 HOH HOH A . E 3 HOH 76 349 349 HOH HOH A . E 3 HOH 77 350 350 HOH HOH A . E 3 HOH 78 351 351 HOH HOH A . E 3 HOH 79 352 352 HOH HOH A . E 3 HOH 80 353 353 HOH HOH A . E 3 HOH 81 354 354 HOH HOH A . E 3 HOH 82 355 355 HOH HOH A . E 3 HOH 83 356 356 HOH HOH A . E 3 HOH 84 357 357 HOH HOH A . E 3 HOH 85 358 358 HOH HOH A . E 3 HOH 86 359 359 HOH HOH A . E 3 HOH 87 360 360 HOH HOH A . E 3 HOH 88 361 361 HOH HOH A . E 3 HOH 89 362 362 HOH HOH A . E 3 HOH 90 363 363 HOH HOH A . E 3 HOH 91 364 364 HOH HOH A . E 3 HOH 92 365 365 HOH HOH A . E 3 HOH 93 366 366 HOH HOH A . E 3 HOH 94 367 367 HOH HOH A . E 3 HOH 95 368 368 HOH HOH A . E 3 HOH 96 369 369 HOH HOH A . E 3 HOH 97 370 370 HOH HOH A . E 3 HOH 98 371 371 HOH HOH A . E 3 HOH 99 372 372 HOH HOH A . E 3 HOH 100 373 373 HOH HOH A . E 3 HOH 101 374 374 HOH HOH A . E 3 HOH 102 375 375 HOH HOH A . E 3 HOH 103 376 376 HOH HOH A . E 3 HOH 104 377 377 HOH HOH A . E 3 HOH 105 378 378 HOH HOH A . E 3 HOH 106 379 379 HOH HOH A . E 3 HOH 107 380 380 HOH HOH A . E 3 HOH 108 381 381 HOH HOH A . E 3 HOH 109 382 382 HOH HOH A . E 3 HOH 110 383 383 HOH HOH A . E 3 HOH 111 384 384 HOH HOH A . E 3 HOH 112 385 385 HOH HOH A . E 3 HOH 113 386 386 HOH HOH A . E 3 HOH 114 387 387 HOH HOH A . E 3 HOH 115 388 388 HOH HOH A . E 3 HOH 116 389 389 HOH HOH A . E 3 HOH 117 390 390 HOH HOH A . E 3 HOH 118 391 391 HOH HOH A . E 3 HOH 119 392 392 HOH HOH A . E 3 HOH 120 393 393 HOH HOH A . E 3 HOH 121 394 394 HOH HOH A . E 3 HOH 122 395 395 HOH HOH A . E 3 HOH 123 396 396 HOH HOH A . E 3 HOH 124 397 397 HOH HOH A . E 3 HOH 125 398 398 HOH HOH A . E 3 HOH 126 399 399 HOH HOH A . E 3 HOH 127 400 400 HOH HOH A . E 3 HOH 128 401 401 HOH HOH A . E 3 HOH 129 402 402 HOH HOH A . E 3 HOH 130 403 403 HOH HOH A . E 3 HOH 131 404 404 HOH HOH A . E 3 HOH 132 405 405 HOH HOH A . E 3 HOH 133 406 406 HOH HOH A . E 3 HOH 134 407 407 HOH HOH A . E 3 HOH 135 408 408 HOH HOH A . E 3 HOH 136 409 409 HOH HOH A . E 3 HOH 137 410 410 HOH HOH A . E 3 HOH 138 411 411 HOH HOH A . E 3 HOH 139 412 412 HOH HOH A . E 3 HOH 140 413 413 HOH HOH A . E 3 HOH 141 414 414 HOH HOH A . E 3 HOH 142 415 415 HOH HOH A . E 3 HOH 143 416 416 HOH HOH A . E 3 HOH 144 417 417 HOH HOH A . E 3 HOH 145 418 418 HOH HOH A . E 3 HOH 146 419 419 HOH HOH A . E 3 HOH 147 420 420 HOH HOH A . E 3 HOH 148 421 421 HOH HOH A . E 3 HOH 149 422 422 HOH HOH A . E 3 HOH 150 423 423 HOH HOH A . E 3 HOH 151 424 424 HOH HOH A . E 3 HOH 152 425 425 HOH HOH A . E 3 HOH 153 426 426 HOH HOH A . E 3 HOH 154 427 427 HOH HOH A . E 3 HOH 155 428 428 HOH HOH A . E 3 HOH 156 429 429 HOH HOH A . E 3 HOH 157 430 430 HOH HOH A . E 3 HOH 158 431 431 HOH HOH A . E 3 HOH 159 432 432 HOH HOH A . E 3 HOH 160 433 433 HOH HOH A . E 3 HOH 161 434 434 HOH HOH A . E 3 HOH 162 435 435 HOH HOH A . E 3 HOH 163 436 436 HOH HOH A . E 3 HOH 164 437 437 HOH HOH A . E 3 HOH 165 438 438 HOH HOH A . E 3 HOH 166 439 439 HOH HOH A . E 3 HOH 167 440 440 HOH HOH A . E 3 HOH 168 441 441 HOH HOH A . E 3 HOH 169 442 442 HOH HOH A . E 3 HOH 170 443 443 HOH HOH A . E 3 HOH 171 444 444 HOH HOH A . E 3 HOH 172 445 445 HOH HOH A . E 3 HOH 173 446 446 HOH HOH A . E 3 HOH 174 447 447 HOH HOH A . E 3 HOH 175 448 448 HOH HOH A . E 3 HOH 176 449 449 HOH HOH A . E 3 HOH 177 450 450 HOH HOH A . E 3 HOH 178 451 451 HOH HOH A . E 3 HOH 179 452 452 HOH HOH A . E 3 HOH 180 453 453 HOH HOH A . E 3 HOH 181 454 454 HOH HOH A . E 3 HOH 182 455 455 HOH HOH A . E 3 HOH 183 456 456 HOH HOH A . E 3 HOH 184 457 457 HOH HOH A . E 3 HOH 185 458 458 HOH HOH A . E 3 HOH 186 459 459 HOH HOH A . E 3 HOH 187 460 460 HOH HOH A . E 3 HOH 188 461 461 HOH HOH A . E 3 HOH 189 462 462 HOH HOH A . E 3 HOH 190 463 463 HOH HOH A . E 3 HOH 191 464 464 HOH HOH A . E 3 HOH 192 465 465 HOH HOH A . E 3 HOH 193 466 466 HOH HOH A . E 3 HOH 194 467 467 HOH HOH A . E 3 HOH 195 468 468 HOH HOH A . E 3 HOH 196 469 469 HOH HOH A . E 3 HOH 197 470 470 HOH HOH A . E 3 HOH 198 471 471 HOH HOH A . E 3 HOH 199 472 472 HOH HOH A . E 3 HOH 200 473 473 HOH HOH A . E 3 HOH 201 474 474 HOH HOH A . E 3 HOH 202 475 475 HOH HOH A . E 3 HOH 203 476 476 HOH HOH A . E 3 HOH 204 477 477 HOH HOH A . E 3 HOH 205 478 478 HOH HOH A . E 3 HOH 206 479 479 HOH HOH A . E 3 HOH 207 480 480 HOH HOH A . E 3 HOH 208 481 481 HOH HOH A . E 3 HOH 209 482 482 HOH HOH A . E 3 HOH 210 483 483 HOH HOH A . E 3 HOH 211 484 484 HOH HOH A . E 3 HOH 212 485 485 HOH HOH A . E 3 HOH 213 486 486 HOH HOH A . E 3 HOH 214 487 487 HOH HOH A . E 3 HOH 215 488 488 HOH HOH A . E 3 HOH 216 489 489 HOH HOH A . E 3 HOH 217 490 490 HOH HOH A . E 3 HOH 218 491 491 HOH HOH A . E 3 HOH 219 492 492 HOH HOH A . E 3 HOH 220 493 493 HOH HOH A . E 3 HOH 221 494 494 HOH HOH A . E 3 HOH 222 495 495 HOH HOH A . E 3 HOH 223 496 496 HOH HOH A . E 3 HOH 224 497 497 HOH HOH A . E 3 HOH 225 498 498 HOH HOH A . E 3 HOH 226 499 499 HOH HOH A . E 3 HOH 227 500 500 HOH HOH A . E 3 HOH 228 501 501 HOH HOH A . E 3 HOH 229 502 502 HOH HOH A . E 3 HOH 230 503 503 HOH HOH A . E 3 HOH 231 504 504 HOH HOH A . E 3 HOH 232 505 505 HOH HOH A . E 3 HOH 233 506 506 HOH HOH A . E 3 HOH 234 507 507 HOH HOH A . E 3 HOH 235 508 508 HOH HOH A . E 3 HOH 236 509 509 HOH HOH A . E 3 HOH 237 510 510 HOH HOH A . E 3 HOH 238 511 511 HOH HOH A . E 3 HOH 239 512 512 HOH HOH A . E 3 HOH 240 513 513 HOH HOH A . E 3 HOH 241 514 514 HOH HOH A . E 3 HOH 242 515 515 HOH HOH A . E 3 HOH 243 516 516 HOH HOH A . E 3 HOH 244 517 517 HOH HOH A . E 3 HOH 245 518 518 HOH HOH A . E 3 HOH 246 519 519 HOH HOH A . E 3 HOH 247 520 520 HOH HOH A . E 3 HOH 248 521 521 HOH HOH A . E 3 HOH 249 522 522 HOH HOH A . E 3 HOH 250 523 523 HOH HOH A . E 3 HOH 251 524 524 HOH HOH A . E 3 HOH 252 525 525 HOH HOH A . E 3 HOH 253 526 526 HOH HOH A . E 3 HOH 254 527 527 HOH HOH A . E 3 HOH 255 528 528 HOH HOH A . E 3 HOH 256 529 529 HOH HOH A . E 3 HOH 257 530 530 HOH HOH A . E 3 HOH 258 531 531 HOH HOH A . E 3 HOH 259 532 532 HOH HOH A . E 3 HOH 260 533 533 HOH HOH A . E 3 HOH 261 534 534 HOH HOH A . E 3 HOH 262 535 535 HOH HOH A . E 3 HOH 263 536 536 HOH HOH A . E 3 HOH 264 537 537 HOH HOH A . E 3 HOH 265 538 538 HOH HOH A . E 3 HOH 266 539 539 HOH HOH A . E 3 HOH 267 540 540 HOH HOH A . E 3 HOH 268 541 541 HOH HOH A . E 3 HOH 269 542 542 HOH HOH A . E 3 HOH 270 543 543 HOH HOH A . E 3 HOH 271 544 544 HOH HOH A . E 3 HOH 272 545 545 HOH HOH A . E 3 HOH 273 546 546 HOH HOH A . E 3 HOH 274 547 547 HOH HOH A . E 3 HOH 275 548 548 HOH HOH A . E 3 HOH 276 549 549 HOH HOH A . E 3 HOH 277 550 550 HOH HOH A . E 3 HOH 278 551 551 HOH HOH A . E 3 HOH 279 552 552 HOH HOH A . E 3 HOH 280 553 553 HOH HOH A . E 3 HOH 281 554 554 HOH HOH A . E 3 HOH 282 555 555 HOH HOH A . E 3 HOH 283 556 556 HOH HOH A . E 3 HOH 284 557 557 HOH HOH A . E 3 HOH 285 558 558 HOH HOH A . E 3 HOH 286 559 559 HOH HOH A . E 3 HOH 287 560 560 HOH HOH A . E 3 HOH 288 561 561 HOH HOH A . E 3 HOH 289 562 562 HOH HOH A . E 3 HOH 290 563 563 HOH HOH A . E 3 HOH 291 564 564 HOH HOH A . E 3 HOH 292 565 565 HOH HOH A . E 3 HOH 293 566 566 HOH HOH A . E 3 HOH 294 567 567 HOH HOH A . E 3 HOH 295 568 568 HOH HOH A . E 3 HOH 296 569 569 HOH HOH A . E 3 HOH 297 570 570 HOH HOH A . E 3 HOH 298 571 571 HOH HOH A . E 3 HOH 299 572 572 HOH HOH A . E 3 HOH 300 573 573 HOH HOH A . E 3 HOH 301 574 574 HOH HOH A . E 3 HOH 302 575 575 HOH HOH A . E 3 HOH 303 576 576 HOH HOH A . E 3 HOH 304 577 577 HOH HOH A . E 3 HOH 305 578 578 HOH HOH A . E 3 HOH 306 579 579 HOH HOH A . E 3 HOH 307 580 580 HOH HOH A . E 3 HOH 308 581 581 HOH HOH A . E 3 HOH 309 582 582 HOH HOH A . E 3 HOH 310 583 583 HOH HOH A . E 3 HOH 311 584 584 HOH HOH A . E 3 HOH 312 585 585 HOH HOH A . E 3 HOH 313 586 586 HOH HOH A . E 3 HOH 314 587 587 HOH HOH A . E 3 HOH 315 588 588 HOH HOH A . E 3 HOH 316 589 589 HOH HOH A . E 3 HOH 317 590 590 HOH HOH A . E 3 HOH 318 591 591 HOH HOH A . E 3 HOH 319 592 592 HOH HOH A . E 3 HOH 320 593 593 HOH HOH A . E 3 HOH 321 594 594 HOH HOH A . E 3 HOH 322 595 595 HOH HOH A . E 3 HOH 323 596 596 HOH HOH A . E 3 HOH 324 597 597 HOH HOH A . E 3 HOH 325 598 598 HOH HOH A . E 3 HOH 326 599 599 HOH HOH A . E 3 HOH 327 600 600 HOH HOH A . E 3 HOH 328 601 601 HOH HOH A . E 3 HOH 329 602 602 HOH HOH A . E 3 HOH 330 603 603 HOH HOH A . E 3 HOH 331 604 604 HOH HOH A . E 3 HOH 332 605 605 HOH HOH A . E 3 HOH 333 606 606 HOH HOH A . E 3 HOH 334 607 607 HOH HOH A . E 3 HOH 335 608 608 HOH HOH A . E 3 HOH 336 609 609 HOH HOH A . E 3 HOH 337 610 610 HOH HOH A . E 3 HOH 338 611 611 HOH HOH A . E 3 HOH 339 612 612 HOH HOH A . E 3 HOH 340 613 613 HOH HOH A . E 3 HOH 341 614 614 HOH HOH A . E 3 HOH 342 615 615 HOH HOH A . E 3 HOH 343 616 616 HOH HOH A . E 3 HOH 344 617 617 HOH HOH A . E 3 HOH 345 618 618 HOH HOH A . E 3 HOH 346 619 619 HOH HOH A . E 3 HOH 347 620 620 HOH HOH A . E 3 HOH 348 621 621 HOH HOH A . E 3 HOH 349 622 622 HOH HOH A . E 3 HOH 350 623 623 HOH HOH A . E 3 HOH 351 624 624 HOH HOH A . E 3 HOH 352 625 625 HOH HOH A . E 3 HOH 353 626 626 HOH HOH A . E 3 HOH 354 627 627 HOH HOH A . E 3 HOH 355 628 628 HOH HOH A . E 3 HOH 356 629 629 HOH HOH A . E 3 HOH 357 630 630 HOH HOH A . E 3 HOH 358 631 631 HOH HOH A . E 3 HOH 359 632 632 HOH HOH A . E 3 HOH 360 633 633 HOH HOH A . E 3 HOH 361 634 634 HOH HOH A . E 3 HOH 362 635 635 HOH HOH A . E 3 HOH 363 636 636 HOH HOH A . E 3 HOH 364 637 637 HOH HOH A . E 3 HOH 365 638 638 HOH HOH A . E 3 HOH 366 639 639 HOH HOH A . E 3 HOH 367 640 640 HOH HOH A . E 3 HOH 368 641 641 HOH HOH A . E 3 HOH 369 642 642 HOH HOH A . E 3 HOH 370 643 643 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 87 A MSE 158 ? MET SELENOMETHIONINE 2 A MSE 145 A MSE 216 ? MET SELENOMETHIONINE 3 A MSE 183 A MSE 254 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-03-31 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-08 4 'Structure model' 1 3 2019-07-17 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' software 3 4 'Structure model' struct_conn 4 5 'Structure model' database_2 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _phasing.method SAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.5.0102 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? 7 SHELXD . ? ? ? ? phasing ? ? ? 8 autoSHARP . ? ? ? ? phasing ? ? ? 9 # _pdbx_entry_details.entry_id 3LWX _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. THE CLONED CONSTRUCT CONTAINS RESIDUES 73-270 OF THE FULL LENGTH PROTEIN. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 180 ? ? -152.25 -50.95 2 1 LEU A 196 ? ? -126.51 -112.49 3 1 SER A 222 ? ? 67.08 -179.69 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 153 ? OE1 ? A GLN 82 OE1 2 1 Y 1 A GLN 153 ? NE2 ? A GLN 82 NE2 3 1 Y 1 A LYS 202 ? NZ ? A LYS 131 NZ 4 1 Y 1 A LYS 227 ? CD ? A LYS 156 CD 5 1 Y 1 A LYS 227 ? CE ? A LYS 156 CE 6 1 Y 1 A LYS 227 ? NZ ? A LYS 156 NZ 7 1 Y 1 A LYS 230 ? CG ? A LYS 159 CG 8 1 Y 1 A LYS 230 ? CD ? A LYS 159 CD 9 1 Y 1 A LYS 230 ? CE ? A LYS 159 CE 10 1 Y 1 A LYS 230 ? NZ ? A LYS 159 NZ # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 water HOH #