HEADER HYDROLASE 03-MAR-10 3M0J TITLE STRUCTURE OF OXALOACETATE ACETYLHYDROLASE IN COMPLEX WITH THE TITLE 2 INHIBITOR 3,3-DIFLUOROOXALACETATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: OXALOACETATE ACETYL HYDROLASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.7.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRYPHONECTRIA PARASITICA; SOURCE 3 ORGANISM_COMMON: CHESTNUT BLIGHT FUNGUS; SOURCE 4 ORGANISM_TAXID: 5116; SOURCE 5 GENE: OAH; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS (ALPHA/BETA)8 BARREL, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR O.HERZBERG,C.CHEN REVDAT 3 06-SEP-23 3M0J 1 REMARK LINK REVDAT 2 19-JAN-11 3M0J 1 JRNL REVDAT 1 16-JUN-10 3M0J 0 JRNL AUTH C.CHEN,Q.SUN,B.NARAYANAN,D.L.NUSS,O.HERZBERG JRNL TITL STRUCTURE OF OXALACETATE ACETYLHYDROLASE, A VIRULENCE FACTOR JRNL TITL 2 OF THE CHESTNUT BLIGHT FUNGUS. JRNL REF J.BIOL.CHEM. V. 285 26685 2010 JRNL REFN ISSN 0021-9258 JRNL PMID 20558740 JRNL DOI 10.1074/JBC.M110.117804 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.480 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 36608 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.120 REMARK 3 FREE R VALUE TEST SET COUNT : 1875 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.9245 - 3.6377 1.00 2862 168 0.1669 0.1688 REMARK 3 2 3.6377 - 2.8902 1.00 2750 138 0.1310 0.1587 REMARK 3 3 2.8902 - 2.5257 1.00 2699 148 0.1324 0.1420 REMARK 3 4 2.5257 - 2.2951 1.00 2677 145 0.1372 0.1745 REMARK 3 5 2.2951 - 2.1308 1.00 2672 146 0.1317 0.1675 REMARK 3 6 2.1308 - 2.0053 1.00 2656 135 0.1430 0.1615 REMARK 3 7 2.0053 - 1.9050 1.00 2667 131 0.1573 0.2106 REMARK 3 8 1.9050 - 1.8221 1.00 2625 148 0.1879 0.2299 REMARK 3 9 1.8221 - 1.7520 1.00 2634 147 0.2295 0.2941 REMARK 3 10 1.7520 - 1.6916 1.00 2644 130 0.2564 0.3136 REMARK 3 11 1.6916 - 1.6387 1.00 2630 142 0.2868 0.2909 REMARK 3 12 1.6387 - 1.5919 1.00 2603 148 0.2990 0.3473 REMARK 3 13 1.5919 - 1.5500 1.00 2614 149 0.3309 0.3595 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.44 REMARK 3 B_SOL : 81.42 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.700 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.14500 REMARK 3 B22 (A**2) : 0.14500 REMARK 3 B33 (A**2) : -0.28900 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4565 REMARK 3 ANGLE : 0.939 8253 REMARK 3 CHIRALITY : 0.073 353 REMARK 3 PLANARITY : 0.004 705 REMARK 3 DIHEDRAL : 16.338 1174 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESIDUE 68-364 REMARK 3 ORIGIN FOR THE GROUP (A): 18.3371 2.3215 -26.0254 REMARK 3 T TENSOR REMARK 3 T11: 0.0677 T22: 0.0588 REMARK 3 T33: 0.0825 T12: 0.0009 REMARK 3 T13: -0.0170 T23: 0.0107 REMARK 3 L TENSOR REMARK 3 L11: 0.3391 L22: 0.5980 REMARK 3 L33: 0.4519 L12: 0.0223 REMARK 3 L13: 0.1131 L23: -0.2674 REMARK 3 S TENSOR REMARK 3 S11: -0.0096 S12: 0.0112 S13: -0.0016 REMARK 3 S21: 0.0899 S22: -0.0195 S23: -0.0798 REMARK 3 S31: -0.0249 S32: 0.0638 S33: -0.0001 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: NOT (CHAIN A AND RESIDUE 68-364) REMARK 3 ORIGIN FOR THE GROUP (A): 19.1104 0.7923 -25.5260 REMARK 3 T TENSOR REMARK 3 T11: 0.0851 T22: 0.0600 REMARK 3 T33: 0.0734 T12: 0.0041 REMARK 3 T13: -0.0219 T23: 0.0027 REMARK 3 L TENSOR REMARK 3 L11: 0.0161 L22: 0.1442 REMARK 3 L33: 0.1139 L12: 0.0134 REMARK 3 L13: 0.0909 L23: -0.0843 REMARK 3 S TENSOR REMARK 3 S11: -0.0228 S12: 0.0178 S13: 0.0308 REMARK 3 S21: 0.0772 S22: 0.0021 S23: -0.0662 REMARK 3 S31: -0.0418 S32: 0.0084 S33: -0.0051 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: ANISOTROPIC B VALUES DERIVED FROM FROM REMARK 3 TLS REFINEMENT, HYDROGENS ARE INCLUDED AS RIDING MODEL REMARK 4 REMARK 4 3M0J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAR-10. REMARK 100 THE DEPOSITION ID IS D_1000057954. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : XENOCS OPTICS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36608 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 10.60 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 0.51400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3LYE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: LIGAND-FREE PROTEIN CRYSTAL GROWN IN REMARK 280 SOLUTION CONTAINING 30% PEG 400, 0.1 M HEPES PH7.5, 0.2 M CACL2, REMARK 280 THEN SOAKED IN MOTHER LIQUOR CONTAINING 0.2M MNCL2 AND 20 MM REMARK 280 INHIBITOR FOR 15 MIN, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 41.07200 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 41.07200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 36.33000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 41.07200 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 41.07200 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 36.33000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 41.07200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 41.07200 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 36.33000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 41.07200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 41.07200 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 36.33000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 21370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -220.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 -72.66000 REMARK 350 BIOMT1 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -72.66000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 926 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 927 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 928 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 929 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 930 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 931 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 932 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 933 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 62 REMARK 465 SER A 63 REMARK 465 HIS A 64 REMARK 465 MET A 65 REMARK 465 ALA A 66 REMARK 465 GLU A 67 REMARK 465 SER A 365 REMARK 465 GLU A 366 REMARK 465 GLY A 367 REMARK 465 VAL A 368 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 75 NZ REMARK 480 ASP A 85 CG OD2 REMARK 480 GLU A 171 OE2 REMARK 480 LYS A 199 CD CE NZ REMARK 480 GLU A 239 CD OE2 REMARK 480 GLU A 243 OE1 OE2 REMARK 480 GLU A 265 CG CD REMARK 480 HIS A 288 CG ND1 CD2 CE1 NE2 REMARK 480 GLU A 295 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 914 O HOH A 922 1.48 REMARK 500 O HOH A 790 O HOH A 907 1.58 REMARK 500 O HOH A 893 O HOH A 924 1.89 REMARK 500 O HOH A 869 O HOH A 915 1.95 REMARK 500 O HOH A 762 O HOH A 817 1.95 REMARK 500 O HOH A 671 O HOH A 797 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 776 O HOH A 922 8554 1.72 REMARK 500 O HOH A 873 O HOH A 880 8554 1.91 REMARK 500 O HOH A 909 O HOH A 909 8554 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 79 CG HIS A 79 CD2 0.065 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 94 -3.04 -142.69 REMARK 500 GLN A 131 -165.85 -121.53 REMARK 500 ASP A 157 -127.54 51.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 502 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 155 OD2 REMARK 620 2 OAF A 501 O3 107.9 REMARK 620 3 OAF A 501 O1 83.0 76.2 REMARK 620 4 HOH A 601 O 163.3 88.3 105.8 REMARK 620 5 HOH A 602 O 83.5 163.4 93.7 81.8 REMARK 620 6 HOH A 603 O 85.5 91.7 159.8 89.7 101.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 503 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 285 OE2 REMARK 620 2 ASN A 286 OD1 92.6 REMARK 620 3 HOH A 604 O 93.1 89.7 REMARK 620 4 HOH A 605 O 99.2 168.1 87.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OAF A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 503 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3LYE RELATED DB: PDB REMARK 900 OAH LIGAND-FREE STRUCTURE REMARK 900 RELATED ID: 3M0K RELATED DB: PDB DBREF 3M0J A 62 368 PDB 3M0J 3M0J 62 368 SEQRES 1 A 307 GLY SER HIS MET ALA GLU ASP GLU PRO PHE SER GLY ALA SEQRES 2 A 307 LYS LYS LEU ARG HIS LEU LEU GLU ASN THR ASP GLU LEU SEQRES 3 A 307 ILE VAL CYS PRO GLY VAL TYR ASP GLY LEU SER ALA ARG SEQRES 4 A 307 THR ALA MET GLU LEU GLY PHE LYS SER LEU TYR MET THR SEQRES 5 A 307 GLY ALA GLY THR THR ALA SER ARG LEU GLY GLN PRO ASP SEQRES 6 A 307 LEU ALA ILE ALA GLN LEU HIS ASP MET ARG ASP ASN ALA SEQRES 7 A 307 ASP MET ILE ALA ASN LEU ASP PRO PHE GLY PRO PRO LEU SEQRES 8 A 307 ILE ALA ASP MET ASP THR GLY TYR GLY GLY PRO ILE MET SEQRES 9 A 307 VAL ALA ARG THR VAL GLU HIS TYR ILE ARG SER GLY VAL SEQRES 10 A 307 ALA GLY ALA HIS LEU GLU ASP GLN ILE LEU THR LYS ARG SEQRES 11 A 307 CYS GLY HIS LEU SER GLY LYS LYS VAL VAL SER ARG ASP SEQRES 12 A 307 GLU TYR LEU VAL ARG ILE ARG ALA ALA VAL ALA THR LYS SEQRES 13 A 307 ARG ARG LEU ARG SER ASP PHE VAL LEU ILE ALA ARG THR SEQRES 14 A 307 ASP ALA LEU GLN SER LEU GLY TYR GLU GLU CYS ILE GLU SEQRES 15 A 307 ARG LEU ARG ALA ALA ARG ASP GLU GLY ALA ASP VAL GLY SEQRES 16 A 307 LEU LEU GLU GLY PHE ARG SER LYS GLU GLN ALA ALA ALA SEQRES 17 A 307 ALA VAL ALA ALA LEU ALA PRO TRP PRO LEU LEU LEU ASN SEQRES 18 A 307 SER VAL GLU ASN GLY HIS SER PRO LEU ILE THR VAL GLU SEQRES 19 A 307 GLU ALA LYS ALA MET GLY PHE ARG ILE MET ILE PHE SER SEQRES 20 A 307 PHE ALA THR LEU ALA PRO ALA TYR ALA ALA ILE ARG GLU SEQRES 21 A 307 THR LEU VAL ARG LEU ARG ASP HIS GLY VAL VAL GLY THR SEQRES 22 A 307 PRO ASP GLY ILE THR PRO VAL ARG LEU PHE GLU VAL CYS SEQRES 23 A 307 GLY LEU GLN ASP ALA MET GLU VAL ASP ASN GLY ALA GLY SEQRES 24 A 307 GLY LYS ALA PHE SER GLU GLY VAL HET OAF A 501 12 HET MN A 502 1 HET CA A 503 1 HETNAM OAF 2,2-DIFLUORO-3,3-DIHYDROXYBUTANEDIOIC ACID HETNAM MN MANGANESE (II) ION HETNAM CA CALCIUM ION FORMUL 2 OAF C4 H4 F2 O6 FORMUL 3 MN MN 2+ FORMUL 4 CA CA 2+ FORMUL 5 HOH *333(H2 O) HELIX 1 1 SER A 72 THR A 84 1 13 HELIX 2 2 ASP A 95 LEU A 105 1 11 HELIX 3 3 THR A 113 GLY A 123 1 11 HELIX 4 4 GLN A 131 ASN A 144 1 14 HELIX 5 5 GLY A 162 SER A 176 1 15 HELIX 6 6 SER A 202 LEU A 220 1 19 HELIX 7 7 ALA A 232 GLY A 237 1 6 HELIX 8 8 GLY A 237 GLU A 251 1 15 HELIX 9 9 SER A 263 ALA A 275 1 13 HELIX 10 10 THR A 293 GLY A 301 1 9 HELIX 11 11 THR A 311 GLY A 330 1 20 HELIX 12 12 THR A 339 CYS A 347 1 9 HELIX 13 13 GLY A 348 ALA A 359 1 12 SHEET 1 A 8 VAL A 255 LEU A 258 0 SHEET 2 A 8 VAL A 225 THR A 230 1 N ALA A 228 O VAL A 255 SHEET 3 A 8 GLY A 180 LEU A 183 1 N ALA A 181 O ILE A 227 SHEET 4 A 8 LEU A 152 ASP A 155 1 N ALA A 154 O GLY A 180 SHEET 5 A 8 LEU A 110 MET A 112 1 N MET A 112 O ILE A 153 SHEET 6 A 8 ILE A 88 VAL A 93 1 N VAL A 93 O TYR A 111 SHEET 7 A 8 ILE A 304 PHE A 307 1 O MET A 305 N CYS A 90 SHEET 8 A 8 LEU A 280 SER A 283 1 N SER A 283 O ILE A 306 LINK OD2 ASP A 155 MN MN A 502 1555 1555 2.10 LINK OE2 GLU A 285 CA CA A 503 1555 1555 2.27 LINK OD1 ASN A 286 CA CA A 503 1555 1555 2.33 LINK O3 OAF A 501 MN MN A 502 1555 1555 2.19 LINK O1 OAF A 501 MN MN A 502 1555 1555 2.23 LINK MN MN A 502 O HOH A 601 1555 1555 2.22 LINK MN MN A 502 O HOH A 602 1555 1555 2.15 LINK MN MN A 502 O HOH A 603 1555 1555 2.26 LINK CA CA A 503 O HOH A 604 1555 1555 2.35 LINK CA CA A 503 O HOH A 605 1555 1555 2.43 CISPEP 1 ALA A 275 PRO A 276 0 4.48 SITE 1 AC1 16 TYR A 111 THR A 113 GLY A 114 ALA A 115 SITE 2 AC1 16 ASP A 126 ASP A 155 CYS A 192 GLY A 193 SITE 3 AC1 16 ARG A 229 GLU A 259 ASN A 282 SER A 308 SITE 4 AC1 16 PHE A 309 MN A 502 HOH A 601 HOH A 629 SITE 1 AC2 6 ASP A 155 LYS A 190 OAF A 501 HOH A 601 SITE 2 AC2 6 HOH A 602 HOH A 603 SITE 1 AC3 6 GLU A 285 ASN A 286 THR A 334 ASP A 336 SITE 2 AC3 6 HOH A 604 HOH A 605 CRYST1 82.144 82.144 72.660 90.00 90.00 90.00 P 42 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012174 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012174 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013763 0.00000