HEADER TRANSPORT PROTEIN 19-MAR-10 3M8U TITLE CRYSTAL STRUCTURE OF GLUTATHIONE-BINDING PROTEIN A (GBPA) FROM TITLE 2 HAEMOPHILUS PARASUIS SH0165 IN COMPLEX WITH GLUTATHIONE DISULFIDE TITLE 3 (GSSG) COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEME-BINDING PROTEIN A; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 24-531; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HAEMOPHILUS PARASUIS; SOURCE 3 ORGANISM_TAXID: 557723; SOURCE 4 STRAIN: SEROVAR 5 (SH0165); SOURCE 5 GENE: HAPS_1202, HBPA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET20B KEYWDS GLUTATHIONE BINDING PROTEIN, ABC-TYPE TRANSPORT SYSTEM, PERIPLASMIC KEYWDS 2 COMPONENT, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR B.VERGAUWEN,J.ELEGHEERT,A.DANSERCOER,B.DEVREESE,S.N.SAVVIDES REVDAT 5 13-NOV-24 3M8U 1 REMARK REVDAT 4 01-NOV-23 3M8U 1 REMARK SEQADV REVDAT 3 01-SEP-10 3M8U 1 JRNL REVDAT 2 21-JUL-10 3M8U 1 AUTHOR TITLE REVDAT 1 14-JUL-10 3M8U 0 JRNL AUTH B.VERGAUWEN,J.ELEGHEERT,A.DANSERCOER,B.DEVREESE,S.N.SAVVIDES JRNL TITL GLUTATHIONE IMPORT IN HAEMOPHILUS INFLUENZAE RD IS PRIMED BY JRNL TITL 2 THE PERIPLASMIC HEME-BINDING PROTEIN HBPA JRNL REF PROC.NATL.ACAD.SCI.USA V. 107 13270 2010 JRNL REFN ISSN 0027-8424 JRNL PMID 20628015 JRNL DOI 10.1073/PNAS.1005198107 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.1_340) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 48787 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2440 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.0034 - 4.7535 1.00 2928 155 0.1872 0.1880 REMARK 3 2 4.7535 - 3.7740 1.00 2807 148 0.1253 0.1514 REMARK 3 3 3.7740 - 3.2972 1.00 2758 145 0.1404 0.1797 REMARK 3 4 3.2972 - 2.9959 1.00 2740 144 0.1514 0.1779 REMARK 3 5 2.9959 - 2.7812 1.00 2743 144 0.1503 0.1723 REMARK 3 6 2.7812 - 2.6173 1.00 2722 144 0.1524 0.2210 REMARK 3 7 2.6173 - 2.4862 1.00 2714 142 0.1541 0.1723 REMARK 3 8 2.4862 - 2.3780 1.00 2714 143 0.1547 0.2044 REMARK 3 9 2.3780 - 2.2865 1.00 2698 142 0.1557 0.1735 REMARK 3 10 2.2865 - 2.2076 1.00 2712 143 0.1544 0.1714 REMARK 3 11 2.2076 - 2.1386 1.00 2687 141 0.1580 0.2001 REMARK 3 12 2.1386 - 2.0774 1.00 2688 142 0.1555 0.2249 REMARK 3 13 2.0774 - 2.0228 1.00 2721 143 0.1650 0.1889 REMARK 3 14 2.0228 - 1.9734 1.00 2671 141 0.1760 0.2110 REMARK 3 15 1.9734 - 1.9285 1.00 2699 142 0.1800 0.2057 REMARK 3 16 1.9285 - 1.8875 1.00 2691 142 0.1915 0.2411 REMARK 3 17 1.8875 - 1.8498 1.00 2654 139 0.1988 0.2401 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.41 REMARK 3 B_SOL : 38.66 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.890 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.69 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.04300 REMARK 3 B22 (A**2) : 0.39900 REMARK 3 B33 (A**2) : -0.44200 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4282 REMARK 3 ANGLE : 0.991 5820 REMARK 3 CHIRALITY : 0.066 617 REMARK 3 PLANARITY : 0.011 766 REMARK 3 DIHEDRAL : 13.995 1634 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 24:27) REMARK 3 ORIGIN FOR THE GROUP (A): 16.7076 5.9560 -21.5859 REMARK 3 T TENSOR REMARK 3 T11: 0.1145 T22: 0.0908 REMARK 3 T33: 0.0963 T12: 0.0066 REMARK 3 T13: 0.0326 T23: -0.0112 REMARK 3 L TENSOR REMARK 3 L11: 1.4196 L22: 0.7253 REMARK 3 L33: 0.5468 L12: -0.4553 REMARK 3 L13: 0.0767 L23: 0.5040 REMARK 3 S TENSOR REMARK 3 S11: 0.0557 S12: -0.0841 S13: 0.1529 REMARK 3 S21: 0.0066 S22: -0.0306 S23: -0.0103 REMARK 3 S31: 0.0539 S32: -0.0315 S33: -0.0223 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 28:132) REMARK 3 ORIGIN FOR THE GROUP (A): 17.5468 -16.7531 -32.4218 REMARK 3 T TENSOR REMARK 3 T11: 0.0936 T22: 0.0605 REMARK 3 T33: 0.0490 T12: -0.0003 REMARK 3 T13: -0.0017 T23: -0.0036 REMARK 3 L TENSOR REMARK 3 L11: 0.3623 L22: 0.3677 REMARK 3 L33: 0.1749 L12: 0.1933 REMARK 3 L13: -0.2050 L23: -0.1394 REMARK 3 S TENSOR REMARK 3 S11: -0.0268 S12: 0.0602 S13: 0.0115 REMARK 3 S21: -0.1252 S22: 0.0277 S23: -0.0090 REMARK 3 S31: 0.0600 S32: -0.0376 S33: 0.0028 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 133:182) REMARK 3 ORIGIN FOR THE GROUP (A): 14.8980 -26.9476 -34.0700 REMARK 3 T TENSOR REMARK 3 T11: 0.1611 T22: 0.0775 REMARK 3 T33: 0.0690 T12: -0.0256 REMARK 3 T13: 0.0032 T23: -0.0232 REMARK 3 L TENSOR REMARK 3 L11: 0.0709 L22: 0.4370 REMARK 3 L33: 0.2291 L12: 0.0751 REMARK 3 L13: -0.1234 L23: -0.0872 REMARK 3 S TENSOR REMARK 3 S11: -0.0730 S12: 0.0240 S13: -0.0293 REMARK 3 S21: -0.1692 S22: 0.0130 S23: -0.0331 REMARK 3 S31: 0.1287 S32: -0.0735 S33: 0.0330 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 183:270) REMARK 3 ORIGIN FOR THE GROUP (A): 22.4209 -5.1304 -22.0433 REMARK 3 T TENSOR REMARK 3 T11: 0.0695 T22: 0.0661 REMARK 3 T33: 0.0591 T12: -0.0096 REMARK 3 T13: 0.0107 T23: 0.0007 REMARK 3 L TENSOR REMARK 3 L11: 0.2783 L22: 0.3626 REMARK 3 L33: 0.1121 L12: 0.1323 REMARK 3 L13: -0.1208 L23: 0.0689 REMARK 3 S TENSOR REMARK 3 S11: 0.0427 S12: -0.0277 S13: 0.0393 REMARK 3 S21: -0.0331 S22: -0.0158 S23: -0.0116 REMARK 3 S31: -0.0211 S32: 0.0515 S33: -0.0239 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 271:299) REMARK 3 ORIGIN FOR THE GROUP (A): 11.0005 -17.9590 -5.6636 REMARK 3 T TENSOR REMARK 3 T11: 0.0593 T22: 0.0606 REMARK 3 T33: 0.0725 T12: -0.0066 REMARK 3 T13: 0.0080 T23: -0.0164 REMARK 3 L TENSOR REMARK 3 L11: 0.1246 L22: 0.3911 REMARK 3 L33: 0.4436 L12: -0.0086 REMARK 3 L13: -0.1949 L23: -0.1238 REMARK 3 S TENSOR REMARK 3 S11: 0.0696 S12: -0.0525 S13: 0.0156 REMARK 3 S21: -0.0422 S22: -0.0464 S23: 0.0529 REMARK 3 S31: -0.0327 S32: 0.0485 S33: -0.0207 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 300:331) REMARK 3 ORIGIN FOR THE GROUP (A): 9.5412 -30.5807 2.3875 REMARK 3 T TENSOR REMARK 3 T11: 0.0558 T22: 0.0568 REMARK 3 T33: 0.0476 T12: 0.0027 REMARK 3 T13: 0.0225 T23: 0.0069 REMARK 3 L TENSOR REMARK 3 L11: 0.3275 L22: 0.7848 REMARK 3 L33: 0.4714 L12: -0.0286 REMARK 3 L13: 0.0507 L23: -0.6079 REMARK 3 S TENSOR REMARK 3 S11: -0.0074 S12: -0.1310 S13: -0.0285 REMARK 3 S21: -0.0979 S22: 0.0585 S23: -0.0214 REMARK 3 S31: 0.0652 S32: -0.0387 S33: -0.0262 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 332:355) REMARK 3 ORIGIN FOR THE GROUP (A): 1.3073 -31.9052 -3.3173 REMARK 3 T TENSOR REMARK 3 T11: 0.0985 T22: 0.1214 REMARK 3 T33: 0.1102 T12: -0.0081 REMARK 3 T13: -0.0028 T23: 0.0238 REMARK 3 L TENSOR REMARK 3 L11: 0.4628 L22: 0.2257 REMARK 3 L33: 2.3430 L12: -0.2612 REMARK 3 L13: 0.7685 L23: -0.5892 REMARK 3 S TENSOR REMARK 3 S11: -0.0327 S12: -0.1286 S13: -0.0977 REMARK 3 S21: 0.0194 S22: 0.0140 S23: 0.0304 REMARK 3 S31: -0.0626 S32: -0.1844 S33: 0.0033 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 356:421) REMARK 3 ORIGIN FOR THE GROUP (A): 20.9683 -31.1107 1.6571 REMARK 3 T TENSOR REMARK 3 T11: 0.0627 T22: 0.0980 REMARK 3 T33: 0.0600 T12: 0.0246 REMARK 3 T13: -0.0010 T23: 0.0243 REMARK 3 L TENSOR REMARK 3 L11: 0.2366 L22: 0.3248 REMARK 3 L33: 0.0912 L12: -0.1430 REMARK 3 L13: 0.0570 L23: 0.1030 REMARK 3 S TENSOR REMARK 3 S11: 0.0001 S12: -0.0848 S13: 0.0190 REMARK 3 S21: 0.0354 S22: -0.0132 S23: -0.0761 REMARK 3 S31: 0.0588 S32: 0.1132 S33: 0.0208 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 422:527) REMARK 3 ORIGIN FOR THE GROUP (A): 8.1379 -27.1573 -15.4530 REMARK 3 T TENSOR REMARK 3 T11: 0.0632 T22: 0.0497 REMARK 3 T33: 0.0661 T12: -0.0118 REMARK 3 T13: -0.0089 T23: -0.0174 REMARK 3 L TENSOR REMARK 3 L11: 0.3262 L22: 0.0160 REMARK 3 L33: 0.4890 L12: 0.0685 REMARK 3 L13: -0.1778 L23: -0.0762 REMARK 3 S TENSOR REMARK 3 S11: -0.0241 S12: 0.0086 S13: -0.0395 REMARK 3 S21: -0.0163 S22: -0.0035 S23: 0.0427 REMARK 3 S31: 0.1025 S32: -0.0411 S33: 0.0170 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN A AND RESID 528:531) REMARK 3 ORIGIN FOR THE GROUP (A): 9.0048 7.8226 -20.3726 REMARK 3 T TENSOR REMARK 3 T11: 0.2109 T22: 0.0708 REMARK 3 T33: 0.2841 T12: 0.0451 REMARK 3 T13: 0.0299 T23: -0.0347 REMARK 3 L TENSOR REMARK 3 L11: 0.4615 L22: 0.3621 REMARK 3 L33: 0.1172 L12: 0.4051 REMARK 3 L13: 0.2288 L23: 0.2046 REMARK 3 S TENSOR REMARK 3 S11: 0.0479 S12: 0.0625 S13: -0.2857 REMARK 3 S21: 0.1051 S22: -0.0045 S23: 0.0910 REMARK 3 S31: 0.0466 S32: 0.0027 S33: -0.0425 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3M8U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-APR-10. REMARK 100 THE DEPOSITION ID IS D_1000058253. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9714 REMARK 200 MONOCHROMATOR : BARTELS MONOCHROMATOR WITH DUAL REMARK 200 CHANNEL CUT CRYSTALS (DCCM) IN (+ REMARK 200 --+) GEOMETRY REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48793 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.290 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.07 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.60200 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.190 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.4 REMARK 200 STARTING MODEL: PDB ENTRY 1DPP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MAGNESIUM CHLORIDE, 0.1M SODIUM REMARK 280 CITRATE PH 5.0, 15% W/V PEG 4000 OR 4% TACSIMATE PH4.0, 20% PEG REMARK 280 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.76000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 71.16000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.23500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 71.16000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.76000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.23500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 23 REMARK 465 LYS A 532 REMARK 465 LEU A 533 REMARK 465 ALA A 534 REMARK 465 ALA A 535 REMARK 465 ALA A 536 REMARK 465 LEU A 537 REMARK 465 GLU A 538 REMARK 465 HIS A 539 REMARK 465 HIS A 540 REMARK 465 HIS A 541 REMARK 465 HIS A 542 REMARK 465 HIS A 543 REMARK 465 HIS A 544 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 985 O HOH A 1008 2.11 REMARK 500 O HOH A 1008 O HOH A 1014 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 44 50.70 -154.56 REMARK 500 SER A 52 -89.42 -135.09 REMARK 500 ALA A 73 -108.83 -135.38 REMARK 500 ASP A 217 19.09 56.95 REMARK 500 GLN A 218 -62.41 -120.96 REMARK 500 ASN A 384 78.82 -160.99 REMARK 500 THR A 423 -61.57 -100.53 REMARK 500 PHE A 439 -62.12 -92.41 REMARK 500 ASN A 451 -84.56 -108.46 REMARK 500 VAL A 498 -60.67 -98.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 TRP A 495 ILE A 496 146.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDS A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLI A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLI A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLI A 4 DBREF 3M8U A 24 531 UNP B8F653 B8F653_HAEPS 24 531 SEQADV 3M8U MET A 23 UNP B8F653 EXPRESSION TAG SEQADV 3M8U SER A 145 UNP B8F653 PRO 145 ENGINEERED MUTATION SEQADV 3M8U MET A 156 UNP B8F653 ASP 156 ENGINEERED MUTATION SEQADV 3M8U LEU A 210 UNP B8F653 VAL 210 ENGINEERED MUTATION SEQADV 3M8U LEU A 223 UNP B8F653 PHE 223 ENGINEERED MUTATION SEQADV 3M8U HIS A 281 UNP B8F653 LEU 281 ENGINEERED MUTATION SEQADV 3M8U SER A 351 UNP B8F653 ASN 351 ENGINEERED MUTATION SEQADV 3M8U LYS A 532 UNP B8F653 EXPRESSION TAG SEQADV 3M8U LEU A 533 UNP B8F653 EXPRESSION TAG SEQADV 3M8U ALA A 534 UNP B8F653 EXPRESSION TAG SEQADV 3M8U ALA A 535 UNP B8F653 EXPRESSION TAG SEQADV 3M8U ALA A 536 UNP B8F653 EXPRESSION TAG SEQADV 3M8U LEU A 537 UNP B8F653 EXPRESSION TAG SEQADV 3M8U GLU A 538 UNP B8F653 EXPRESSION TAG SEQADV 3M8U HIS A 539 UNP B8F653 EXPRESSION TAG SEQADV 3M8U HIS A 540 UNP B8F653 EXPRESSION TAG SEQADV 3M8U HIS A 541 UNP B8F653 EXPRESSION TAG SEQADV 3M8U HIS A 542 UNP B8F653 EXPRESSION TAG SEQADV 3M8U HIS A 543 UNP B8F653 EXPRESSION TAG SEQADV 3M8U HIS A 544 UNP B8F653 EXPRESSION TAG SEQRES 1 A 522 MET ASP LYS THR PHE ILE ASN CYS VAL SER ARG SER PRO SEQRES 2 A 522 THR GLY PHE SER PRO ALA LEU VAL MET ASP GLY ILE SER SEQRES 3 A 522 TYR ASN ALA SER SER GLN GLN VAL TYR ASN ARG LEU VAL SEQRES 4 A 522 GLU PHE LYS ARG GLY SER THR ASP ILE GLU PRO ALA LEU SEQRES 5 A 522 ALA GLU SER TRP THR VAL SER ASP ASP GLY LEU THR TYR SEQRES 6 A 522 THR PHE ASN LEU ARG LYS GLY VAL LYS PHE HIS SER ASN SEQRES 7 A 522 LYS GLU PHE THR PRO SER ARG ASP PHE ASN ALA ASP ASP SEQRES 8 A 522 VAL VAL PHE SER PHE GLN ARG GLN LEU ASP PRO ASN HIS SEQRES 9 A 522 PRO TYR HIS ASN VAL SER LYS ALA THR TYR PRO TYR PHE SEQRES 10 A 522 LYS ALA MET LYS PHE SER THR LEU LEU LYS SER VAL GLU SEQRES 11 A 522 LYS VAL ASP MET HIS THR VAL LYS ILE THR LEU ASN ARG SEQRES 12 A 522 GLN ASP ALA THR PHE LEU ALA SER LEU GLY MET ASP PHE SEQRES 13 A 522 ILE SER ILE TYR SER ALA GLU TYR ALA ASP LYS MET LEU SEQRES 14 A 522 ALA ALA GLY LYS PRO GLU THR ILE ASP THR THR PRO ILE SEQRES 15 A 522 GLY THR GLY PRO PHE LEU PHE ALA GLY TYR GLN VAL ASP SEQRES 16 A 522 GLN LYS SER ARG TYR LEU ALA HIS LYS GLU TYR TRP LYS SEQRES 17 A 522 GLY LYS ALA ASP ILE ASP ARG LEU ILE PHE GLU ILE VAL SEQRES 18 A 522 PRO ASP ALA THR ALA ARG TYR ALA LYS LEU GLN ALA GLY SEQRES 19 A 522 ALA CYS ASP LEU ILE ASP PHE PRO ASN ALA ALA ASP LEU SEQRES 20 A 522 GLU LYS MET LYS THR ASP PRO LYS VAL ASN LEU HIS SER SEQRES 21 A 522 GLN SER GLY LEU ASN ILE ALA TYR ILE ALA PHE ASN THR SEQRES 22 A 522 GLU LYS ALA PRO PHE ASP ASN VAL LYS VAL ARG GLN ALA SEQRES 23 A 522 LEU ASN TYR ALA VAL ASP LYS ASN ALA ILE ILE ASP ALA SEQRES 24 A 522 VAL TYR ARG GLY ALA GLY VAL ALA ALA LYS ASN PRO LEU SEQRES 25 A 522 PRO PRO THR ILE TRP GLY TYR ASN ASN GLU ILE THR GLY SEQRES 26 A 522 TYR GLU TYR SER PRO GLU LYS ALA LYS GLN LEU LEU LYS SEQRES 27 A 522 GLU ALA GLY PHE GLU ASN GLY PHE GLU THR ASP ILE TRP SEQRES 28 A 522 VAL GLN PRO VAL VAL ARG ALA SER ASN PRO ASN PRO ARG SEQRES 29 A 522 ARG MET ALA GLU LEU VAL GLN SER ASP TRP GLU LYS VAL SEQRES 30 A 522 GLY VAL LYS SER LYS LEU VAL SER TYR GLU TRP GLY ASP SEQRES 31 A 522 TYR ILE LYS ARG THR LYS ALA GLY GLU LEU THR ALA GLY SEQRES 32 A 522 THR TYR GLY TRP SER GLY ASP ASN GLY ASP PRO ASP ASN SEQRES 33 A 522 PHE LEU SER PRO LEU PHE GLY SER GLU ASN VAL GLY ASN SEQRES 34 A 522 SER ASN TYR ALA ARG PHE LYS ASN PRO GLU LEU ASP ALA SEQRES 35 A 522 LEU LEU HIS LYS ALA VAL GLY LEU SER ASP LYS ALA GLU SEQRES 36 A 522 ARG ALA LYS ILE TYR GLU GLN ALA GLN VAL LEU LEU LYS SEQRES 37 A 522 GLU GLN ALA PRO TRP ILE ASN VAL ALA HIS SER ILE ASN SEQRES 38 A 522 PHE ALA PRO THR SER LYS ARG VAL GLN ASP TYR LYS GLN SEQRES 39 A 522 SER PRO PHE GLY TYR THR TYR LEU TYR GLY THR LYS LEU SEQRES 40 A 522 ALA ASP LYS LEU ALA ALA ALA LEU GLU HIS HIS HIS HIS SEQRES 41 A 522 HIS HIS HET GDS A 1 65 HET MLI A 2 9 HET MLI A 3 9 HET MLI A 4 9 HETNAM GDS OXIDIZED GLUTATHIONE DISULFIDE HETNAM MLI MALONATE ION FORMUL 2 GDS C20 H32 N6 O12 S2 FORMUL 3 MLI 3(C3 H2 O4 2-) FORMUL 6 HOH *594(H2 O) HELIX 1 1 SER A 39 VAL A 43 5 5 HELIX 2 2 ASP A 45 SER A 52 1 8 HELIX 3 3 SER A 52 TYR A 57 1 6 HELIX 4 4 ASN A 110 ASP A 123 1 14 HELIX 5 5 ASN A 130 ALA A 134 5 5 HELIX 6 6 TYR A 136 MET A 142 1 7 HELIX 7 7 LYS A 143 LEU A 147 1 5 HELIX 8 8 THR A 169 LEU A 174 1 6 HELIX 9 9 GLY A 175 SER A 180 5 6 HELIX 10 10 SER A 183 ALA A 193 1 11 HELIX 11 11 GLU A 197 THR A 202 1 6 HELIX 12 12 ASP A 245 ALA A 255 1 11 HELIX 13 13 ASN A 265 LYS A 273 1 9 HELIX 14 14 ASN A 302 ALA A 312 1 11 HELIX 15 15 ASP A 314 VAL A 322 1 9 HELIX 16 16 SER A 351 ALA A 362 1 12 HELIX 17 17 ASN A 384 LYS A 398 1 15 HELIX 18 18 GLU A 409 ALA A 419 1 11 HELIX 19 19 PRO A 436 GLY A 445 1 10 HELIX 20 20 SER A 446 VAL A 449 5 4 HELIX 21 21 ASN A 459 GLY A 471 1 13 HELIX 22 22 ASP A 474 ALA A 493 1 20 SHEET 1 A 5 PHE A 209 GLN A 215 0 SHEET 2 A 5 LYS A 219 ALA A 224 -1 O ARG A 221 N ALA A 212 SHEET 3 A 5 ARG A 237 ILE A 242 -1 O PHE A 240 N SER A 220 SHEET 4 A 5 THR A 26 VAL A 31 1 N ASN A 29 O ILE A 239 SHEET 5 A 5 LEU A 260 ILE A 261 1 O LEU A 260 N CYS A 30 SHEET 1 B 2 VAL A 61 PHE A 63 0 SHEET 2 B 2 ILE A 70 PRO A 72 -1 O GLU A 71 N GLU A 62 SHEET 1 C 4 ALA A 75 VAL A 80 0 SHEET 2 C 4 THR A 86 LEU A 91 -1 O ASN A 90 N SER A 77 SHEET 3 C 4 THR A 158 LEU A 163 -1 O VAL A 159 N PHE A 89 SHEET 4 C 4 LEU A 148 ASP A 155 -1 N VAL A 154 O THR A 158 SHEET 1 D 3 ASN A 279 SER A 284 0 SHEET 2 D 3 TRP A 495 THR A 507 -1 O ASN A 503 N GLN A 283 SHEET 3 D 3 GLY A 327 ALA A 329 -1 N VAL A 328 O HIS A 500 SHEET 1 E 6 ASN A 279 SER A 284 0 SHEET 2 E 6 TRP A 495 THR A 507 -1 O ASN A 503 N GLN A 283 SHEET 3 E 6 ASN A 287 PHE A 293 -1 N ALA A 289 O ALA A 499 SHEET 4 E 6 ALA A 424 SER A 430 -1 O TYR A 427 N TYR A 290 SHEET 5 E 6 PHE A 368 TRP A 373 1 N TRP A 373 O ALA A 424 SHEET 6 E 6 VAL A 401 VAL A 406 1 O LYS A 404 N ILE A 372 SHEET 1 F 2 VAL A 511 GLN A 512 0 SHEET 2 F 2 LYS A 528 LEU A 529 -1 O LYS A 528 N GLN A 512 SSBOND 1 CYS A 30 CYS A 258 1555 1555 2.02 CISPEP 1 ALA A 298 PRO A 299 0 4.63 SITE 1 AC1 30 HOH A 7 ARG A 33 ASP A 45 GLY A 46 SITE 2 AC1 30 ILE A 47 ASN A 50 TYR A 138 PHE A 263 SITE 3 AC1 30 ARG A 379 ALA A 380 SER A 381 GLY A 428 SITE 4 AC1 30 TRP A 429 SER A 430 ASP A 432 ASN A 503 SITE 5 AC1 30 PHE A 504 ALA A 505 GLN A 516 PHE A 519 SITE 6 AC1 30 GLY A 520 TYR A 521 HOH A 610 HOH A 611 SITE 7 AC1 30 HOH A 613 HOH A 674 HOH A 676 HOH A 700 SITE 8 AC1 30 HOH A 749 HOH A 992 SITE 1 AC2 7 LYS A 273 SER A 282 ARG A 386 LEU A 405 SITE 2 AC2 7 SER A 407 HOH A 726 HOH A 889 SITE 1 AC3 11 MET A 44 PRO A 137 LYS A 418 ASN A 451 SITE 2 AC3 11 SER A 452 TYR A 454 HOH A 640 HOH A 749 SITE 3 AC3 11 HOH A 845 HOH A1039 HOH A1064 SITE 1 AC4 8 ARG A 33 SER A 34 PRO A 244 ASN A 316 SITE 2 AC4 8 HOH A 567 HOH A 796 HOH A 974 HOH A1090 CRYST1 57.520 68.470 142.320 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017385 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014605 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007026 0.00000