data_3M9K # _entry.id 3M9K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3M9K pdb_00003m9k 10.2210/pdb3m9k/pdb RCSB RCSB058279 ? ? WWPDB D_1000058279 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1ERT _pdbx_database_related.details 'wild-type protein' _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3M9K _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-03-22 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Weichsel, A.' 1 'Montfort, W.R.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Crystal structure of human thioredoxin revealing an unraveled helix and exposed S-nitrosation site.' 'Protein Sci.' 19 1801 1806 2010 PRCIEI US 0961-8368 0795 ? 20662007 10.1002/pro.455 1 'Buried S-nitrosocysteine revealed in crystal structures of human thioredoxin.' Biochemistry 46 1219 1227 2007 BICHAW US 0006-2960 0033 ? 17260951 10.1021/bi061878r 2 'Crystal structures of reduced, oxidized, and mutated human thioredoxins: evidence for a regulatory homodimer.' Structure 4 735 751 1996 STRUE6 UK 0969-2126 2005 ? 8805557 ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Weichsel, A.' 1 ? primary 'Kem, M.' 2 ? primary 'Montfort, W.R.' 3 ? 1 'Weichsel, A.' 4 ? 1 'Brailey, J.L.' 5 ? 1 'Montfort, W.R.' 6 ? 2 'Weichsel, A.' 7 ? 2 'Gasdaska, J.R.' 8 ? 2 'Powis, G.' 9 ? 2 'Montfort, W.R.' 10 ? # _cell.entry_id 3M9K _cell.length_a 125.620 _cell.length_b 125.620 _cell.length_c 33.550 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3M9K _symmetry.space_group_name_H-M 'P 6' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 168 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Thioredoxin 11718.348 2 ? 'C69S, C73S' ? ? 2 non-polymer syn 'SULFATE ION' 96.063 4 ? ? ? ? 3 non-polymer syn '(4S,5S)-1,2-DITHIANE-4,5-DIOL' 152.235 1 ? ? ? ? 4 water nat water 18.015 165 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Trx, ATL-derived factor, ADF, Surface-associated sulphydryl protein, SASP' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASESEVKSMPTFQFF KKGQKVGEFSGANKEKLEATINELV ; _entity_poly.pdbx_seq_one_letter_code_can ;MVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASESEVKSMPTFQFF KKGQKVGEFSGANKEKLEATINELV ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 VAL n 1 3 LYS n 1 4 GLN n 1 5 ILE n 1 6 GLU n 1 7 SER n 1 8 LYS n 1 9 THR n 1 10 ALA n 1 11 PHE n 1 12 GLN n 1 13 GLU n 1 14 ALA n 1 15 LEU n 1 16 ASP n 1 17 ALA n 1 18 ALA n 1 19 GLY n 1 20 ASP n 1 21 LYS n 1 22 LEU n 1 23 VAL n 1 24 VAL n 1 25 VAL n 1 26 ASP n 1 27 PHE n 1 28 SER n 1 29 ALA n 1 30 THR n 1 31 TRP n 1 32 CYS n 1 33 GLY n 1 34 PRO n 1 35 CYS n 1 36 LYS n 1 37 MET n 1 38 ILE n 1 39 LYS n 1 40 PRO n 1 41 PHE n 1 42 PHE n 1 43 HIS n 1 44 SER n 1 45 LEU n 1 46 SER n 1 47 GLU n 1 48 LYS n 1 49 TYR n 1 50 SER n 1 51 ASN n 1 52 VAL n 1 53 ILE n 1 54 PHE n 1 55 LEU n 1 56 GLU n 1 57 VAL n 1 58 ASP n 1 59 VAL n 1 60 ASP n 1 61 ASP n 1 62 CYS n 1 63 GLN n 1 64 ASP n 1 65 VAL n 1 66 ALA n 1 67 SER n 1 68 GLU n 1 69 SER n 1 70 GLU n 1 71 VAL n 1 72 LYS n 1 73 SER n 1 74 MET n 1 75 PRO n 1 76 THR n 1 77 PHE n 1 78 GLN n 1 79 PHE n 1 80 PHE n 1 81 LYS n 1 82 LYS n 1 83 GLY n 1 84 GLN n 1 85 LYS n 1 86 VAL n 1 87 GLY n 1 88 GLU n 1 89 PHE n 1 90 SER n 1 91 GLY n 1 92 ALA n 1 93 ASN n 1 94 LYS n 1 95 GLU n 1 96 LYS n 1 97 LEU n 1 98 GLU n 1 99 ALA n 1 100 THR n 1 101 ILE n 1 102 ASN n 1 103 GLU n 1 104 LEU n 1 105 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'TXN, TRDX, TRX, TRX1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET3a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code THIO_HUMAN _struct_ref.pdbx_db_accession P10599 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEVKCMPTFQFF KKGQKVGEFSGANKEKLEATINELV ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3M9K A 1 ? 105 ? P10599 1 ? 105 ? 1 105 2 1 3M9K B 1 ? 105 ? P10599 1 ? 105 ? 1 105 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3M9K SER A 69 ? UNP P10599 CYS 69 'engineered mutation' 69 1 1 3M9K SER A 73 ? UNP P10599 CYS 73 'engineered mutation' 73 2 2 3M9K SER B 69 ? UNP P10599 CYS 69 'engineered mutation' 69 3 2 3M9K SER B 73 ? UNP P10599 CYS 73 'engineered mutation' 73 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 D1D non-polymer . '(4S,5S)-1,2-DITHIANE-4,5-DIOL' ? 'C4 H8 O2 S2' 152.235 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3M9K _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.26 _exptl_crystal.density_percent_sol 62.28 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '1.8 M ammonium sulfate, 100 mM MES, 10 mM CoCl2, 2 mM DTT, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 298K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.pdbx_collection_date 2009-04-17 _diffrn_detector.details 'RH COATED FLAT MIRROR, TOROIDAL FOCUSING MIRROR' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI(111) DOUBLE CRYSTAL MONOCHROMATOR' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97946 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.pdbx_wavelength 0.97946 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3M9K _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 22.430 _reflns.d_resolution_high 1.500 _reflns.number_obs 48316 _reflns.number_all ? _reflns.percent_possible_obs 98.6 _reflns.pdbx_Rmerge_I_obs 0.05300 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.2000 _reflns.B_iso_Wilson_estimate 29.90 _reflns.pdbx_redundancy 9.890 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.50 _reflns_shell.d_res_low 1.55 _reflns_shell.percent_possible_all 97.8 _reflns_shell.Rmerge_I_obs 0.63100 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.800 _reflns_shell.pdbx_redundancy 9.16 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3M9K _refine.ls_number_reflns_obs 48316 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 22.34 _refine.ls_d_res_high 1.50 _refine.ls_percent_reflns_obs 98.6 _refine.ls_R_factor_obs 0.185 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.184 _refine.ls_R_factor_R_free 0.211 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 2445 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 0.00 _refine.occupancy_max 1.00 _refine.correlation_coeff_Fo_to_Fc 0.967 _refine.correlation_coeff_Fo_to_Fc_free 0.958 _refine.B_iso_mean 23.87 _refine.aniso_B[1][1] 0.22000 _refine.aniso_B[2][2] 0.22000 _refine.aniso_B[3][3] -0.32000 _refine.aniso_B[1][2] 0.11000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES: REFINED INDIVIDUALLY' _refine.pdbx_starting_model 1ERT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.077 _refine.pdbx_overall_ESU_R_Free 0.069 _refine.overall_SU_ML 0.047 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 2.812 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 3M9K _refine_analyze.Luzzati_coordinate_error_obs 0.202 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1642 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 28 _refine_hist.number_atoms_solvent 165 _refine_hist.number_atoms_total 1835 _refine_hist.d_res_high 1.50 _refine_hist.d_res_low 22.34 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.020 0.022 ? 1945 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 1325 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.731 1.972 ? 2658 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.950 3.004 ? 3303 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.513 5.000 ? 265 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 33.671 27.011 ? 87 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.519 15.000 ? 373 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.104 0.200 ? 287 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.020 ? 2227 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.003 0.020 ? 363 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.664 1.500 ? 1191 'X-RAY DIFFRACTION' ? r_mcbond_other 0.763 1.500 ? 471 'X-RAY DIFFRACTION' ? r_mcangle_it 2.547 2.000 ? 1960 'X-RAY DIFFRACTION' ? r_scbond_it 3.724 3.000 ? 754 'X-RAY DIFFRACTION' ? r_scangle_it 5.540 4.500 ? 685 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 1.807 3.000 ? 3270 'X-RAY DIFFRACTION' ? r_sphericity_free 9.192 3.000 ? 167 'X-RAY DIFFRACTION' ? r_sphericity_bonded 3.531 3.000 ? 3212 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.50 _refine_ls_shell.d_res_low 1.54 _refine_ls_shell.number_reflns_R_work 3296 _refine_ls_shell.R_factor_R_work 0.3030 _refine_ls_shell.percent_reflns_obs 97.05 _refine_ls_shell.R_factor_R_free 0.3470 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 164 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3M9K _struct.title 'Crystal structure of human thioredoxin C69/73S double-mutant, oxidized form' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3M9K _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text 'dimer, intermolecular disulfide bond, DTT, disulfide bond, S-nitrosylation, OXIDOREDUCTASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 4 ? I N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 7 ? ALA A 18 ? SER A 7 ALA A 18 1 ? 12 HELX_P HELX_P2 2 CYS A 32 ? TYR A 49 ? CYS A 32 TYR A 49 1 ? 18 HELX_P HELX_P3 3 CYS A 62 ? SER A 69 ? CYS A 62 SER A 69 1 ? 8 HELX_P HELX_P4 4 ASN A 93 ? VAL A 105 ? ASN A 93 VAL A 105 1 ? 13 HELX_P HELX_P5 5 SER B 7 ? ALA B 18 ? SER B 7 ALA B 18 1 ? 12 HELX_P HELX_P6 6 CYS B 32 ? TYR B 49 ? CYS B 32 TYR B 49 1 ? 18 HELX_P HELX_P7 7 SER B 67 ? VAL B 71 ? SER B 67 VAL B 71 5 ? 5 HELX_P HELX_P8 8 ASN B 93 ? VAL B 105 ? ASN B 93 VAL B 105 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 32 SG ? ? ? 1_555 A CYS 35 SG ? ? A CYS 32 A CYS 35 1_555 ? ? ? ? ? ? ? 2.180 ? ? disulf2 disulf ? ? A CYS 62 SG ? ? ? 1_555 B CYS 62 SG ? ? A CYS 62 B CYS 62 1_555 ? ? ? ? ? ? ? 2.055 ? ? disulf3 disulf ? ? B CYS 32 SG ? ? ? 1_555 B CYS 35 SG ? ? B CYS 32 B CYS 35 1_555 ? ? ? ? ? ? ? 2.279 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 MET 74 A . ? MET 74 A PRO 75 A ? PRO 75 A 1 -6.14 2 MET 74 B . ? MET 74 B PRO 75 B ? PRO 75 B 1 -7.02 3 MET 74 B . ? MET 74 B PRO 75 B ? PRO 75 B 1 -9.30 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 2 ? GLN A 4 ? VAL A 2 GLN A 4 A 2 ILE A 53 ? ASP A 58 ? ILE A 53 ASP A 58 A 3 VAL A 23 ? SER A 28 ? VAL A 23 SER A 28 A 4 THR A 76 ? LYS A 81 ? THR A 76 LYS A 81 A 5 GLN A 84 ? SER A 90 ? GLN A 84 SER A 90 B 1 LYS B 3 ? GLN B 4 ? LYS B 3 GLN B 4 B 2 ILE B 53 ? ASP B 58 ? ILE B 53 ASP B 58 B 3 VAL B 23 ? SER B 28 ? VAL B 23 SER B 28 B 4 THR B 76 ? LYS B 81 ? THR B 76 LYS B 81 B 5 GLN B 84 ? SER B 90 ? GLN B 84 SER B 90 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 3 ? N LYS A 3 O PHE A 54 ? O PHE A 54 A 2 3 O ILE A 53 ? O ILE A 53 N VAL A 24 ? N VAL A 24 A 3 4 N PHE A 27 ? N PHE A 27 O THR A 76 ? O THR A 76 A 4 5 N PHE A 77 ? N PHE A 77 O PHE A 89 ? O PHE A 89 B 1 2 N LYS B 3 ? N LYS B 3 O PHE B 54 ? O PHE B 54 B 2 3 O ILE B 53 ? O ILE B 53 N VAL B 24 ? N VAL B 24 B 3 4 N PHE B 27 ? N PHE B 27 O THR B 76 ? O THR B 76 B 4 5 N PHE B 77 ? N PHE B 77 O PHE B 89 ? O PHE B 89 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 106 ? 7 'BINDING SITE FOR RESIDUE SO4 A 106' AC2 Software B D1D 106 ? 8 'BINDING SITE FOR RESIDUE D1D B 106' AC3 Software B SO4 107 ? 6 'BINDING SITE FOR RESIDUE SO4 B 107' AC4 Software B SO4 108 ? 3 'BINDING SITE FOR RESIDUE SO4 B 108' AC5 Software B SO4 109 ? 4 'BINDING SITE FOR RESIDUE SO4 B 109' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 ASP A 61 ? ASP A 61 . ? 1_555 ? 2 AC1 7 GLN A 63 ? GLN A 63 . ? 1_555 ? 3 AC1 7 ASP A 64 ? ASP A 64 . ? 1_555 ? 4 AC1 7 HOH H . ? HOH A 150 . ? 1_555 ? 5 AC1 7 HOH H . ? HOH A 185 . ? 1_555 ? 6 AC1 7 ASP B 61 ? ASP B 61 . ? 1_555 ? 7 AC1 7 CYS B 62 ? CYS B 62 . ? 1_555 ? 8 AC2 8 PHE B 27 ? PHE B 27 . ? 1_555 ? 9 AC2 8 GLU B 70 ? GLU B 70 . ? 1_555 ? 10 AC2 8 MET B 74 ? MET B 74 . ? 1_555 ? 11 AC2 8 THR B 76 ? THR B 76 . ? 1_555 ? 12 AC2 8 GLN B 78 ? GLN B 78 . ? 1_555 ? 13 AC2 8 HOH I . ? HOH B 136 . ? 1_555 ? 14 AC2 8 HOH I . ? HOH B 158 . ? 1_555 ? 15 AC2 8 HOH I . ? HOH B 185 . ? 1_555 ? 16 AC3 6 THR A 9 ? THR A 9 . ? 1_555 ? 17 AC3 6 LYS B 3 ? LYS B 3 . ? 1_555 ? 18 AC3 6 GLU B 6 ? GLU B 6 . ? 1_555 ? 19 AC3 6 SER B 7 ? SER B 7 . ? 1_555 ? 20 AC3 6 ALA B 10 ? ALA B 10 . ? 1_555 ? 21 AC3 6 HOH I . ? HOH B 113 . ? 1_555 ? 22 AC4 3 PHE B 89 ? PHE B 89 . ? 1_555 ? 23 AC4 3 SER B 90 ? SER B 90 . ? 1_555 ? 24 AC4 3 HOH I . ? HOH B 180 . ? 1_555 ? 25 AC5 4 ALA B 92 ? ALA B 92 . ? 1_555 ? 26 AC5 4 ASN B 93 ? ASN B 93 . ? 1_555 ? 27 AC5 4 LYS B 94 ? LYS B 94 . ? 1_555 ? 28 AC5 4 GLU B 95 ? GLU B 95 . ? 1_555 ? # _atom_sites.entry_id 3M9K _atom_sites.fract_transf_matrix[1][1] 0.007961 _atom_sites.fract_transf_matrix[1][2] 0.004596 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009192 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.029806 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 LYS 3 3 3 LYS LYS A . n A 1 4 GLN 4 4 4 GLN GLN A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 PHE 11 11 11 PHE PHE A . n A 1 12 GLN 12 12 12 GLN GLN A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 GLY 19 19 19 GLY GLY A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 ASP 26 26 26 ASP ASP A . n A 1 27 PHE 27 27 27 PHE PHE A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 THR 30 30 30 THR THR A . n A 1 31 TRP 31 31 31 TRP TRP A . n A 1 32 CYS 32 32 32 CYS CYS A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 PRO 34 34 34 PRO PRO A . n A 1 35 CYS 35 35 35 CYS CYS A . n A 1 36 LYS 36 36 36 LYS LYS A . n A 1 37 MET 37 37 37 MET MET A . n A 1 38 ILE 38 38 38 ILE ILE A . n A 1 39 LYS 39 39 39 LYS LYS A . n A 1 40 PRO 40 40 40 PRO PRO A . n A 1 41 PHE 41 41 41 PHE PHE A . n A 1 42 PHE 42 42 42 PHE PHE A . n A 1 43 HIS 43 43 43 HIS HIS A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 SER 46 46 46 SER SER A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 TYR 49 49 49 TYR TYR A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 VAL 52 52 52 VAL VAL A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 PHE 54 54 54 PHE PHE A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 GLU 56 56 56 GLU GLU A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 CYS 62 62 62 CYS CYS A . n A 1 63 GLN 63 63 63 GLN GLN A . n A 1 64 ASP 64 64 64 ASP ASP A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 ALA 66 66 66 ALA ALA A . n A 1 67 SER 67 67 67 SER SER A . n A 1 68 GLU 68 68 68 GLU GLU A . n A 1 69 SER 69 69 69 SER SER A . n A 1 70 GLU 70 70 70 GLU GLU A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 SER 73 73 73 SER SER A . n A 1 74 MET 74 74 74 MET MET A . n A 1 75 PRO 75 75 75 PRO PRO A . n A 1 76 THR 76 76 76 THR THR A . n A 1 77 PHE 77 77 77 PHE PHE A . n A 1 78 GLN 78 78 78 GLN GLN A . n A 1 79 PHE 79 79 79 PHE PHE A . n A 1 80 PHE 80 80 80 PHE PHE A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 LYS 82 82 82 LYS LYS A . n A 1 83 GLY 83 83 83 GLY GLY A . n A 1 84 GLN 84 84 84 GLN GLN A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 GLU 88 88 88 GLU GLU A . n A 1 89 PHE 89 89 89 PHE PHE A . n A 1 90 SER 90 90 90 SER SER A . n A 1 91 GLY 91 91 91 GLY GLY A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 ASN 93 93 93 ASN ASN A . n A 1 94 LYS 94 94 94 LYS LYS A . n A 1 95 GLU 95 95 95 GLU GLU A . n A 1 96 LYS 96 96 96 LYS LYS A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 GLU 98 98 98 GLU GLU A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 THR 100 100 100 THR THR A . n A 1 101 ILE 101 101 101 ILE ILE A . n A 1 102 ASN 102 102 102 ASN ASN A . n A 1 103 GLU 103 103 103 GLU GLU A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 VAL 105 105 105 VAL VAL A . n B 1 1 MET 1 1 1 MET MET B . n B 1 2 VAL 2 2 2 VAL VAL B . n B 1 3 LYS 3 3 3 LYS LYS B . n B 1 4 GLN 4 4 4 GLN GLN B . n B 1 5 ILE 5 5 5 ILE ILE B . n B 1 6 GLU 6 6 6 GLU GLU B . n B 1 7 SER 7 7 7 SER SER B . n B 1 8 LYS 8 8 8 LYS LYS B . n B 1 9 THR 9 9 9 THR THR B . n B 1 10 ALA 10 10 10 ALA ALA B . n B 1 11 PHE 11 11 11 PHE PHE B . n B 1 12 GLN 12 12 12 GLN GLN B . n B 1 13 GLU 13 13 13 GLU GLU B . n B 1 14 ALA 14 14 14 ALA ALA B . n B 1 15 LEU 15 15 15 LEU LEU B . n B 1 16 ASP 16 16 16 ASP ASP B . n B 1 17 ALA 17 17 17 ALA ALA B . n B 1 18 ALA 18 18 18 ALA ALA B . n B 1 19 GLY 19 19 19 GLY GLY B . n B 1 20 ASP 20 20 20 ASP ASP B . n B 1 21 LYS 21 21 21 LYS LYS B . n B 1 22 LEU 22 22 22 LEU LEU B . n B 1 23 VAL 23 23 23 VAL VAL B . n B 1 24 VAL 24 24 24 VAL VAL B . n B 1 25 VAL 25 25 25 VAL VAL B . n B 1 26 ASP 26 26 26 ASP ASP B . n B 1 27 PHE 27 27 27 PHE PHE B . n B 1 28 SER 28 28 28 SER SER B . n B 1 29 ALA 29 29 29 ALA ALA B . n B 1 30 THR 30 30 30 THR THR B . n B 1 31 TRP 31 31 31 TRP TRP B . n B 1 32 CYS 32 32 32 CYS CYS B . n B 1 33 GLY 33 33 33 GLY GLY B . n B 1 34 PRO 34 34 34 PRO PRO B . n B 1 35 CYS 35 35 35 CYS CYS B . n B 1 36 LYS 36 36 36 LYS LYS B . n B 1 37 MET 37 37 37 MET MET B . n B 1 38 ILE 38 38 38 ILE ILE B . n B 1 39 LYS 39 39 39 LYS LYS B . n B 1 40 PRO 40 40 40 PRO PRO B . n B 1 41 PHE 41 41 41 PHE PHE B . n B 1 42 PHE 42 42 42 PHE PHE B . n B 1 43 HIS 43 43 43 HIS HIS B . n B 1 44 SER 44 44 44 SER SER B . n B 1 45 LEU 45 45 45 LEU LEU B . n B 1 46 SER 46 46 46 SER SER B . n B 1 47 GLU 47 47 47 GLU GLU B . n B 1 48 LYS 48 48 48 LYS LYS B . n B 1 49 TYR 49 49 49 TYR TYR B . n B 1 50 SER 50 50 50 SER SER B . n B 1 51 ASN 51 51 51 ASN ASN B . n B 1 52 VAL 52 52 52 VAL VAL B . n B 1 53 ILE 53 53 53 ILE ILE B . n B 1 54 PHE 54 54 54 PHE PHE B . n B 1 55 LEU 55 55 55 LEU LEU B . n B 1 56 GLU 56 56 56 GLU GLU B . n B 1 57 VAL 57 57 57 VAL VAL B . n B 1 58 ASP 58 58 58 ASP ASP B . n B 1 59 VAL 59 59 59 VAL VAL B . n B 1 60 ASP 60 60 60 ASP ASP B . n B 1 61 ASP 61 61 61 ASP ASP B . n B 1 62 CYS 62 62 62 CYS CYS B . n B 1 63 GLN 63 63 63 GLN GLN B . n B 1 64 ASP 64 64 64 ASP ASP B . n B 1 65 VAL 65 65 65 VAL VAL B . n B 1 66 ALA 66 66 66 ALA ALA B . n B 1 67 SER 67 67 67 SER SER B . n B 1 68 GLU 68 68 68 GLU GLU B . n B 1 69 SER 69 69 69 SER SER B . n B 1 70 GLU 70 70 70 GLU GLU B . n B 1 71 VAL 71 71 71 VAL VAL B . n B 1 72 LYS 72 72 72 LYS LYS B . n B 1 73 SER 73 73 73 SER SER B . n B 1 74 MET 74 74 74 MET MET B . n B 1 75 PRO 75 75 75 PRO PRO B . n B 1 76 THR 76 76 76 THR THR B . n B 1 77 PHE 77 77 77 PHE PHE B . n B 1 78 GLN 78 78 78 GLN GLN B . n B 1 79 PHE 79 79 79 PHE PHE B . n B 1 80 PHE 80 80 80 PHE PHE B . n B 1 81 LYS 81 81 81 LYS LYS B . n B 1 82 LYS 82 82 82 LYS LYS B . n B 1 83 GLY 83 83 83 GLY GLY B . n B 1 84 GLN 84 84 84 GLN GLN B . n B 1 85 LYS 85 85 85 LYS LYS B . n B 1 86 VAL 86 86 86 VAL VAL B . n B 1 87 GLY 87 87 87 GLY GLY B . n B 1 88 GLU 88 88 88 GLU GLU B . n B 1 89 PHE 89 89 89 PHE PHE B . n B 1 90 SER 90 90 90 SER SER B . n B 1 91 GLY 91 91 91 GLY GLY B . n B 1 92 ALA 92 92 92 ALA ALA B . n B 1 93 ASN 93 93 93 ASN ASN B . n B 1 94 LYS 94 94 94 LYS LYS B . n B 1 95 GLU 95 95 95 GLU GLU B . n B 1 96 LYS 96 96 96 LYS LYS B . n B 1 97 LEU 97 97 97 LEU LEU B . n B 1 98 GLU 98 98 98 GLU GLU B . n B 1 99 ALA 99 99 99 ALA ALA B . n B 1 100 THR 100 100 100 THR THR B . n B 1 101 ILE 101 101 101 ILE ILE B . n B 1 102 ASN 102 102 102 ASN ASN B . n B 1 103 GLU 103 103 103 GLU GLU B . n B 1 104 LEU 104 104 104 LEU LEU B . n B 1 105 VAL 105 105 105 VAL VAL B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 1 106 106 SO4 SO4 A . D 3 D1D 1 106 106 D1D D1D B . E 2 SO4 1 107 107 SO4 SO4 B . F 2 SO4 1 108 108 SO4 SO4 B . G 2 SO4 1 109 109 SO4 SO4 B . H 4 HOH 1 107 107 HOH HOH A . H 4 HOH 2 108 108 HOH HOH A . H 4 HOH 3 109 109 HOH HOH A . H 4 HOH 4 110 110 HOH HOH A . H 4 HOH 5 111 111 HOH HOH A . H 4 HOH 6 112 112 HOH HOH A . H 4 HOH 7 113 113 HOH HOH A . H 4 HOH 8 114 114 HOH HOH A . H 4 HOH 9 115 115 HOH HOH A . H 4 HOH 10 116 116 HOH HOH A . H 4 HOH 11 117 117 HOH HOH A . H 4 HOH 12 118 118 HOH HOH A . H 4 HOH 13 119 119 HOH HOH A . H 4 HOH 14 120 120 HOH HOH A . H 4 HOH 15 121 121 HOH HOH A . H 4 HOH 16 122 122 HOH HOH A . H 4 HOH 17 123 123 HOH HOH A . H 4 HOH 18 124 124 HOH HOH A . H 4 HOH 19 125 125 HOH HOH A . H 4 HOH 20 126 126 HOH HOH A . H 4 HOH 21 127 127 HOH HOH A . H 4 HOH 22 128 128 HOH HOH A . H 4 HOH 23 129 129 HOH HOH A . H 4 HOH 24 130 130 HOH HOH A . H 4 HOH 25 131 131 HOH HOH A . H 4 HOH 26 132 132 HOH HOH A . H 4 HOH 27 133 133 HOH HOH A . H 4 HOH 28 134 134 HOH HOH A . H 4 HOH 29 135 135 HOH HOH A . H 4 HOH 30 136 136 HOH HOH A . H 4 HOH 31 137 137 HOH HOH A . H 4 HOH 32 138 138 HOH HOH A . H 4 HOH 33 139 139 HOH HOH A . H 4 HOH 34 140 140 HOH HOH A . H 4 HOH 35 141 141 HOH HOH A . H 4 HOH 36 142 142 HOH HOH A . H 4 HOH 37 143 143 HOH HOH A . H 4 HOH 38 144 144 HOH HOH A . H 4 HOH 39 145 145 HOH HOH A . H 4 HOH 40 146 146 HOH HOH A . H 4 HOH 41 147 147 HOH HOH A . H 4 HOH 42 148 148 HOH HOH A . H 4 HOH 43 149 149 HOH HOH A . H 4 HOH 44 150 150 HOH HOH A . H 4 HOH 45 151 151 HOH HOH A . H 4 HOH 46 152 152 HOH HOH A . H 4 HOH 47 153 153 HOH HOH A . H 4 HOH 48 154 154 HOH HOH A . H 4 HOH 49 155 155 HOH HOH A . H 4 HOH 50 156 156 HOH HOH A . H 4 HOH 51 157 157 HOH HOH A . H 4 HOH 52 158 158 HOH HOH A . H 4 HOH 53 159 159 HOH HOH A . H 4 HOH 54 160 160 HOH HOH A . H 4 HOH 55 161 161 HOH HOH A . H 4 HOH 56 162 162 HOH HOH A . H 4 HOH 57 163 163 HOH HOH A . H 4 HOH 58 164 164 HOH HOH A . H 4 HOH 59 165 165 HOH HOH A . H 4 HOH 60 166 166 HOH HOH A . H 4 HOH 61 167 167 HOH HOH A . H 4 HOH 62 168 168 HOH HOH A . H 4 HOH 63 169 169 HOH HOH A . H 4 HOH 64 170 170 HOH HOH A . H 4 HOH 65 171 171 HOH HOH A . H 4 HOH 66 172 172 HOH HOH A . H 4 HOH 67 173 173 HOH HOH A . H 4 HOH 68 174 174 HOH HOH A . H 4 HOH 69 175 175 HOH HOH A . H 4 HOH 70 176 176 HOH HOH A . H 4 HOH 71 177 177 HOH HOH A . H 4 HOH 72 178 178 HOH HOH A . H 4 HOH 73 179 179 HOH HOH A . H 4 HOH 74 180 180 HOH HOH A . H 4 HOH 75 181 181 HOH HOH A . H 4 HOH 76 182 182 HOH HOH A . H 4 HOH 77 183 183 HOH HOH A . H 4 HOH 78 184 184 HOH HOH A . H 4 HOH 79 185 185 HOH HOH A . H 4 HOH 80 186 186 HOH HOH A . H 4 HOH 81 187 187 HOH HOH A . H 4 HOH 82 188 188 HOH HOH A . H 4 HOH 83 189 189 HOH HOH A . H 4 HOH 84 190 190 HOH HOH A . I 4 HOH 1 110 110 HOH HOH B . I 4 HOH 2 111 111 HOH HOH B . I 4 HOH 3 112 112 HOH HOH B . I 4 HOH 4 113 113 HOH HOH B . I 4 HOH 5 114 114 HOH HOH B . I 4 HOH 6 115 115 HOH HOH B . I 4 HOH 7 116 116 HOH HOH B . I 4 HOH 8 117 117 HOH HOH B . I 4 HOH 9 118 118 HOH HOH B . I 4 HOH 10 119 119 HOH HOH B . I 4 HOH 11 120 120 HOH HOH B . I 4 HOH 12 121 121 HOH HOH B . I 4 HOH 13 122 122 HOH HOH B . I 4 HOH 14 123 123 HOH HOH B . I 4 HOH 15 124 124 HOH HOH B . I 4 HOH 16 125 125 HOH HOH B . I 4 HOH 17 126 126 HOH HOH B . I 4 HOH 18 127 127 HOH HOH B . I 4 HOH 19 128 128 HOH HOH B . I 4 HOH 20 129 129 HOH HOH B . I 4 HOH 21 130 130 HOH HOH B . I 4 HOH 22 131 131 HOH HOH B . I 4 HOH 23 132 132 HOH HOH B . I 4 HOH 24 133 133 HOH HOH B . I 4 HOH 25 134 134 HOH HOH B . I 4 HOH 26 135 135 HOH HOH B . I 4 HOH 27 136 136 HOH HOH B . I 4 HOH 28 137 137 HOH HOH B . I 4 HOH 29 138 138 HOH HOH B . I 4 HOH 30 139 139 HOH HOH B . I 4 HOH 31 140 140 HOH HOH B . I 4 HOH 32 141 141 HOH HOH B . I 4 HOH 33 142 142 HOH HOH B . I 4 HOH 34 143 143 HOH HOH B . I 4 HOH 35 144 144 HOH HOH B . I 4 HOH 36 145 145 HOH HOH B . I 4 HOH 37 146 146 HOH HOH B . I 4 HOH 38 147 147 HOH HOH B . I 4 HOH 39 148 148 HOH HOH B . I 4 HOH 40 149 149 HOH HOH B . I 4 HOH 41 150 150 HOH HOH B . I 4 HOH 42 151 151 HOH HOH B . I 4 HOH 43 152 152 HOH HOH B . I 4 HOH 44 153 153 HOH HOH B . I 4 HOH 45 154 154 HOH HOH B . I 4 HOH 46 155 155 HOH HOH B . I 4 HOH 47 156 156 HOH HOH B . I 4 HOH 48 157 157 HOH HOH B . I 4 HOH 49 158 158 HOH HOH B . I 4 HOH 50 159 159 HOH HOH B . I 4 HOH 51 160 160 HOH HOH B . I 4 HOH 52 161 161 HOH HOH B . I 4 HOH 53 162 162 HOH HOH B . I 4 HOH 54 163 163 HOH HOH B . I 4 HOH 55 164 164 HOH HOH B . I 4 HOH 56 165 165 HOH HOH B . I 4 HOH 57 166 166 HOH HOH B . I 4 HOH 58 167 167 HOH HOH B . I 4 HOH 59 168 168 HOH HOH B . I 4 HOH 60 169 169 HOH HOH B . I 4 HOH 61 170 170 HOH HOH B . I 4 HOH 62 171 171 HOH HOH B . I 4 HOH 63 172 172 HOH HOH B . I 4 HOH 64 173 173 HOH HOH B . I 4 HOH 65 174 174 HOH HOH B . I 4 HOH 66 175 175 HOH HOH B . I 4 HOH 67 176 176 HOH HOH B . I 4 HOH 68 177 177 HOH HOH B . I 4 HOH 69 178 178 HOH HOH B . I 4 HOH 70 179 179 HOH HOH B . I 4 HOH 71 180 180 HOH HOH B . I 4 HOH 72 181 181 HOH HOH B . I 4 HOH 73 182 182 HOH HOH B . I 4 HOH 74 183 183 HOH HOH B . I 4 HOH 75 184 184 HOH HOH B . I 4 HOH 76 185 185 HOH HOH B . I 4 HOH 77 186 186 HOH HOH B . I 4 HOH 78 187 187 HOH HOH B . I 4 HOH 79 188 188 HOH HOH B . I 4 HOH 80 189 189 HOH HOH B . I 4 HOH 81 190 190 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 3 software_defined_assembly PISA tetrameric 4 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,H 2 1 B,D,E,F,G,I 3 1,2 A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 3 'ABSA (A^2)' 3510 ? 3 MORE -20 ? 3 'SSA (A^2)' 19500 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_655 -x+1,-y,z -1.0000000000 0.0000000000 0.0000000000 125.6200000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-08-11 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-10-06 4 'Structure model' 1 3 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' struct_ref_seq_dif 3 3 'Structure model' struct_site 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 REFMAC 5.5.0072 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 2 PDB_EXTRACT 3.100 'Jan. 22, 2010' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 Blu-Ice . ? ? ? ? 'data collection' ? ? ? 4 CrystalClear . ? ? ? ? 'data reduction' ? ? ? 5 d*TREK . ? ? ? ? 'data scaling' ? ? ? 6 MOLREP . ? ? ? ? phasing ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 88 ? ? -172.56 143.23 2 1 LYS B 72 ? ? -118.81 -79.62 3 1 LYS B 72 ? ? -118.81 -80.32 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ASN N N N N 14 ASN CA C N S 15 ASN C C N N 16 ASN O O N N 17 ASN CB C N N 18 ASN CG C N N 19 ASN OD1 O N N 20 ASN ND2 N N N 21 ASN OXT O N N 22 ASN H H N N 23 ASN H2 H N N 24 ASN HA H N N 25 ASN HB2 H N N 26 ASN HB3 H N N 27 ASN HD21 H N N 28 ASN HD22 H N N 29 ASN HXT H N N 30 ASP N N N N 31 ASP CA C N S 32 ASP C C N N 33 ASP O O N N 34 ASP CB C N N 35 ASP CG C N N 36 ASP OD1 O N N 37 ASP OD2 O N N 38 ASP OXT O N N 39 ASP H H N N 40 ASP H2 H N N 41 ASP HA H N N 42 ASP HB2 H N N 43 ASP HB3 H N N 44 ASP HD2 H N N 45 ASP HXT H N N 46 CYS N N N N 47 CYS CA C N R 48 CYS C C N N 49 CYS O O N N 50 CYS CB C N N 51 CYS SG S N N 52 CYS OXT O N N 53 CYS H H N N 54 CYS H2 H N N 55 CYS HA H N N 56 CYS HB2 H N N 57 CYS HB3 H N N 58 CYS HG H N N 59 CYS HXT H N N 60 D1D S1 S N N 61 D1D C1 C N N 62 D1D C2 C N S 63 D1D O2 O N N 64 D1D C3 C N S 65 D1D O3 O N N 66 D1D C4 C N N 67 D1D S4 S N N 68 D1D H1C1 H N N 69 D1D H1C2 H N N 70 D1D H2 H N N 71 D1D HA H N N 72 D1D H3 H N N 73 D1D HB H N N 74 D1D H4C1 H N N 75 D1D H4C2 H N N 76 GLN N N N N 77 GLN CA C N S 78 GLN C C N N 79 GLN O O N N 80 GLN CB C N N 81 GLN CG C N N 82 GLN CD C N N 83 GLN OE1 O N N 84 GLN NE2 N N N 85 GLN OXT O N N 86 GLN H H N N 87 GLN H2 H N N 88 GLN HA H N N 89 GLN HB2 H N N 90 GLN HB3 H N N 91 GLN HG2 H N N 92 GLN HG3 H N N 93 GLN HE21 H N N 94 GLN HE22 H N N 95 GLN HXT H N N 96 GLU N N N N 97 GLU CA C N S 98 GLU C C N N 99 GLU O O N N 100 GLU CB C N N 101 GLU CG C N N 102 GLU CD C N N 103 GLU OE1 O N N 104 GLU OE2 O N N 105 GLU OXT O N N 106 GLU H H N N 107 GLU H2 H N N 108 GLU HA H N N 109 GLU HB2 H N N 110 GLU HB3 H N N 111 GLU HG2 H N N 112 GLU HG3 H N N 113 GLU HE2 H N N 114 GLU HXT H N N 115 GLY N N N N 116 GLY CA C N N 117 GLY C C N N 118 GLY O O N N 119 GLY OXT O N N 120 GLY H H N N 121 GLY H2 H N N 122 GLY HA2 H N N 123 GLY HA3 H N N 124 GLY HXT H N N 125 HIS N N N N 126 HIS CA C N S 127 HIS C C N N 128 HIS O O N N 129 HIS CB C N N 130 HIS CG C Y N 131 HIS ND1 N Y N 132 HIS CD2 C Y N 133 HIS CE1 C Y N 134 HIS NE2 N Y N 135 HIS OXT O N N 136 HIS H H N N 137 HIS H2 H N N 138 HIS HA H N N 139 HIS HB2 H N N 140 HIS HB3 H N N 141 HIS HD1 H N N 142 HIS HD2 H N N 143 HIS HE1 H N N 144 HIS HE2 H N N 145 HIS HXT H N N 146 HOH O O N N 147 HOH H1 H N N 148 HOH H2 H N N 149 ILE N N N N 150 ILE CA C N S 151 ILE C C N N 152 ILE O O N N 153 ILE CB C N S 154 ILE CG1 C N N 155 ILE CG2 C N N 156 ILE CD1 C N N 157 ILE OXT O N N 158 ILE H H N N 159 ILE H2 H N N 160 ILE HA H N N 161 ILE HB H N N 162 ILE HG12 H N N 163 ILE HG13 H N N 164 ILE HG21 H N N 165 ILE HG22 H N N 166 ILE HG23 H N N 167 ILE HD11 H N N 168 ILE HD12 H N N 169 ILE HD13 H N N 170 ILE HXT H N N 171 LEU N N N N 172 LEU CA C N S 173 LEU C C N N 174 LEU O O N N 175 LEU CB C N N 176 LEU CG C N N 177 LEU CD1 C N N 178 LEU CD2 C N N 179 LEU OXT O N N 180 LEU H H N N 181 LEU H2 H N N 182 LEU HA H N N 183 LEU HB2 H N N 184 LEU HB3 H N N 185 LEU HG H N N 186 LEU HD11 H N N 187 LEU HD12 H N N 188 LEU HD13 H N N 189 LEU HD21 H N N 190 LEU HD22 H N N 191 LEU HD23 H N N 192 LEU HXT H N N 193 LYS N N N N 194 LYS CA C N S 195 LYS C C N N 196 LYS O O N N 197 LYS CB C N N 198 LYS CG C N N 199 LYS CD C N N 200 LYS CE C N N 201 LYS NZ N N N 202 LYS OXT O N N 203 LYS H H N N 204 LYS H2 H N N 205 LYS HA H N N 206 LYS HB2 H N N 207 LYS HB3 H N N 208 LYS HG2 H N N 209 LYS HG3 H N N 210 LYS HD2 H N N 211 LYS HD3 H N N 212 LYS HE2 H N N 213 LYS HE3 H N N 214 LYS HZ1 H N N 215 LYS HZ2 H N N 216 LYS HZ3 H N N 217 LYS HXT H N N 218 MET N N N N 219 MET CA C N S 220 MET C C N N 221 MET O O N N 222 MET CB C N N 223 MET CG C N N 224 MET SD S N N 225 MET CE C N N 226 MET OXT O N N 227 MET H H N N 228 MET H2 H N N 229 MET HA H N N 230 MET HB2 H N N 231 MET HB3 H N N 232 MET HG2 H N N 233 MET HG3 H N N 234 MET HE1 H N N 235 MET HE2 H N N 236 MET HE3 H N N 237 MET HXT H N N 238 PHE N N N N 239 PHE CA C N S 240 PHE C C N N 241 PHE O O N N 242 PHE CB C N N 243 PHE CG C Y N 244 PHE CD1 C Y N 245 PHE CD2 C Y N 246 PHE CE1 C Y N 247 PHE CE2 C Y N 248 PHE CZ C Y N 249 PHE OXT O N N 250 PHE H H N N 251 PHE H2 H N N 252 PHE HA H N N 253 PHE HB2 H N N 254 PHE HB3 H N N 255 PHE HD1 H N N 256 PHE HD2 H N N 257 PHE HE1 H N N 258 PHE HE2 H N N 259 PHE HZ H N N 260 PHE HXT H N N 261 PRO N N N N 262 PRO CA C N S 263 PRO C C N N 264 PRO O O N N 265 PRO CB C N N 266 PRO CG C N N 267 PRO CD C N N 268 PRO OXT O N N 269 PRO H H N N 270 PRO HA H N N 271 PRO HB2 H N N 272 PRO HB3 H N N 273 PRO HG2 H N N 274 PRO HG3 H N N 275 PRO HD2 H N N 276 PRO HD3 H N N 277 PRO HXT H N N 278 SER N N N N 279 SER CA C N S 280 SER C C N N 281 SER O O N N 282 SER CB C N N 283 SER OG O N N 284 SER OXT O N N 285 SER H H N N 286 SER H2 H N N 287 SER HA H N N 288 SER HB2 H N N 289 SER HB3 H N N 290 SER HG H N N 291 SER HXT H N N 292 SO4 S S N N 293 SO4 O1 O N N 294 SO4 O2 O N N 295 SO4 O3 O N N 296 SO4 O4 O N N 297 THR N N N N 298 THR CA C N S 299 THR C C N N 300 THR O O N N 301 THR CB C N R 302 THR OG1 O N N 303 THR CG2 C N N 304 THR OXT O N N 305 THR H H N N 306 THR H2 H N N 307 THR HA H N N 308 THR HB H N N 309 THR HG1 H N N 310 THR HG21 H N N 311 THR HG22 H N N 312 THR HG23 H N N 313 THR HXT H N N 314 TRP N N N N 315 TRP CA C N S 316 TRP C C N N 317 TRP O O N N 318 TRP CB C N N 319 TRP CG C Y N 320 TRP CD1 C Y N 321 TRP CD2 C Y N 322 TRP NE1 N Y N 323 TRP CE2 C Y N 324 TRP CE3 C Y N 325 TRP CZ2 C Y N 326 TRP CZ3 C Y N 327 TRP CH2 C Y N 328 TRP OXT O N N 329 TRP H H N N 330 TRP H2 H N N 331 TRP HA H N N 332 TRP HB2 H N N 333 TRP HB3 H N N 334 TRP HD1 H N N 335 TRP HE1 H N N 336 TRP HE3 H N N 337 TRP HZ2 H N N 338 TRP HZ3 H N N 339 TRP HH2 H N N 340 TRP HXT H N N 341 TYR N N N N 342 TYR CA C N S 343 TYR C C N N 344 TYR O O N N 345 TYR CB C N N 346 TYR CG C Y N 347 TYR CD1 C Y N 348 TYR CD2 C Y N 349 TYR CE1 C Y N 350 TYR CE2 C Y N 351 TYR CZ C Y N 352 TYR OH O N N 353 TYR OXT O N N 354 TYR H H N N 355 TYR H2 H N N 356 TYR HA H N N 357 TYR HB2 H N N 358 TYR HB3 H N N 359 TYR HD1 H N N 360 TYR HD2 H N N 361 TYR HE1 H N N 362 TYR HE2 H N N 363 TYR HH H N N 364 TYR HXT H N N 365 VAL N N N N 366 VAL CA C N S 367 VAL C C N N 368 VAL O O N N 369 VAL CB C N N 370 VAL CG1 C N N 371 VAL CG2 C N N 372 VAL OXT O N N 373 VAL H H N N 374 VAL H2 H N N 375 VAL HA H N N 376 VAL HB H N N 377 VAL HG11 H N N 378 VAL HG12 H N N 379 VAL HG13 H N N 380 VAL HG21 H N N 381 VAL HG22 H N N 382 VAL HG23 H N N 383 VAL HXT H N N 384 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ASN N CA sing N N 13 ASN N H sing N N 14 ASN N H2 sing N N 15 ASN CA C sing N N 16 ASN CA CB sing N N 17 ASN CA HA sing N N 18 ASN C O doub N N 19 ASN C OXT sing N N 20 ASN CB CG sing N N 21 ASN CB HB2 sing N N 22 ASN CB HB3 sing N N 23 ASN CG OD1 doub N N 24 ASN CG ND2 sing N N 25 ASN ND2 HD21 sing N N 26 ASN ND2 HD22 sing N N 27 ASN OXT HXT sing N N 28 ASP N CA sing N N 29 ASP N H sing N N 30 ASP N H2 sing N N 31 ASP CA C sing N N 32 ASP CA CB sing N N 33 ASP CA HA sing N N 34 ASP C O doub N N 35 ASP C OXT sing N N 36 ASP CB CG sing N N 37 ASP CB HB2 sing N N 38 ASP CB HB3 sing N N 39 ASP CG OD1 doub N N 40 ASP CG OD2 sing N N 41 ASP OD2 HD2 sing N N 42 ASP OXT HXT sing N N 43 CYS N CA sing N N 44 CYS N H sing N N 45 CYS N H2 sing N N 46 CYS CA C sing N N 47 CYS CA CB sing N N 48 CYS CA HA sing N N 49 CYS C O doub N N 50 CYS C OXT sing N N 51 CYS CB SG sing N N 52 CYS CB HB2 sing N N 53 CYS CB HB3 sing N N 54 CYS SG HG sing N N 55 CYS OXT HXT sing N N 56 D1D S1 C1 sing N N 57 D1D S1 S4 sing N N 58 D1D C1 C2 sing N N 59 D1D C1 H1C1 sing N N 60 D1D C1 H1C2 sing N N 61 D1D C2 O2 sing N N 62 D1D C2 C3 sing N N 63 D1D C2 H2 sing N N 64 D1D O2 HA sing N N 65 D1D C3 O3 sing N N 66 D1D C3 C4 sing N N 67 D1D C3 H3 sing N N 68 D1D O3 HB sing N N 69 D1D C4 S4 sing N N 70 D1D C4 H4C1 sing N N 71 D1D C4 H4C2 sing N N 72 GLN N CA sing N N 73 GLN N H sing N N 74 GLN N H2 sing N N 75 GLN CA C sing N N 76 GLN CA CB sing N N 77 GLN CA HA sing N N 78 GLN C O doub N N 79 GLN C OXT sing N N 80 GLN CB CG sing N N 81 GLN CB HB2 sing N N 82 GLN CB HB3 sing N N 83 GLN CG CD sing N N 84 GLN CG HG2 sing N N 85 GLN CG HG3 sing N N 86 GLN CD OE1 doub N N 87 GLN CD NE2 sing N N 88 GLN NE2 HE21 sing N N 89 GLN NE2 HE22 sing N N 90 GLN OXT HXT sing N N 91 GLU N CA sing N N 92 GLU N H sing N N 93 GLU N H2 sing N N 94 GLU CA C sing N N 95 GLU CA CB sing N N 96 GLU CA HA sing N N 97 GLU C O doub N N 98 GLU C OXT sing N N 99 GLU CB CG sing N N 100 GLU CB HB2 sing N N 101 GLU CB HB3 sing N N 102 GLU CG CD sing N N 103 GLU CG HG2 sing N N 104 GLU CG HG3 sing N N 105 GLU CD OE1 doub N N 106 GLU CD OE2 sing N N 107 GLU OE2 HE2 sing N N 108 GLU OXT HXT sing N N 109 GLY N CA sing N N 110 GLY N H sing N N 111 GLY N H2 sing N N 112 GLY CA C sing N N 113 GLY CA HA2 sing N N 114 GLY CA HA3 sing N N 115 GLY C O doub N N 116 GLY C OXT sing N N 117 GLY OXT HXT sing N N 118 HIS N CA sing N N 119 HIS N H sing N N 120 HIS N H2 sing N N 121 HIS CA C sing N N 122 HIS CA CB sing N N 123 HIS CA HA sing N N 124 HIS C O doub N N 125 HIS C OXT sing N N 126 HIS CB CG sing N N 127 HIS CB HB2 sing N N 128 HIS CB HB3 sing N N 129 HIS CG ND1 sing Y N 130 HIS CG CD2 doub Y N 131 HIS ND1 CE1 doub Y N 132 HIS ND1 HD1 sing N N 133 HIS CD2 NE2 sing Y N 134 HIS CD2 HD2 sing N N 135 HIS CE1 NE2 sing Y N 136 HIS CE1 HE1 sing N N 137 HIS NE2 HE2 sing N N 138 HIS OXT HXT sing N N 139 HOH O H1 sing N N 140 HOH O H2 sing N N 141 ILE N CA sing N N 142 ILE N H sing N N 143 ILE N H2 sing N N 144 ILE CA C sing N N 145 ILE CA CB sing N N 146 ILE CA HA sing N N 147 ILE C O doub N N 148 ILE C OXT sing N N 149 ILE CB CG1 sing N N 150 ILE CB CG2 sing N N 151 ILE CB HB sing N N 152 ILE CG1 CD1 sing N N 153 ILE CG1 HG12 sing N N 154 ILE CG1 HG13 sing N N 155 ILE CG2 HG21 sing N N 156 ILE CG2 HG22 sing N N 157 ILE CG2 HG23 sing N N 158 ILE CD1 HD11 sing N N 159 ILE CD1 HD12 sing N N 160 ILE CD1 HD13 sing N N 161 ILE OXT HXT sing N N 162 LEU N CA sing N N 163 LEU N H sing N N 164 LEU N H2 sing N N 165 LEU CA C sing N N 166 LEU CA CB sing N N 167 LEU CA HA sing N N 168 LEU C O doub N N 169 LEU C OXT sing N N 170 LEU CB CG sing N N 171 LEU CB HB2 sing N N 172 LEU CB HB3 sing N N 173 LEU CG CD1 sing N N 174 LEU CG CD2 sing N N 175 LEU CG HG sing N N 176 LEU CD1 HD11 sing N N 177 LEU CD1 HD12 sing N N 178 LEU CD1 HD13 sing N N 179 LEU CD2 HD21 sing N N 180 LEU CD2 HD22 sing N N 181 LEU CD2 HD23 sing N N 182 LEU OXT HXT sing N N 183 LYS N CA sing N N 184 LYS N H sing N N 185 LYS N H2 sing N N 186 LYS CA C sing N N 187 LYS CA CB sing N N 188 LYS CA HA sing N N 189 LYS C O doub N N 190 LYS C OXT sing N N 191 LYS CB CG sing N N 192 LYS CB HB2 sing N N 193 LYS CB HB3 sing N N 194 LYS CG CD sing N N 195 LYS CG HG2 sing N N 196 LYS CG HG3 sing N N 197 LYS CD CE sing N N 198 LYS CD HD2 sing N N 199 LYS CD HD3 sing N N 200 LYS CE NZ sing N N 201 LYS CE HE2 sing N N 202 LYS CE HE3 sing N N 203 LYS NZ HZ1 sing N N 204 LYS NZ HZ2 sing N N 205 LYS NZ HZ3 sing N N 206 LYS OXT HXT sing N N 207 MET N CA sing N N 208 MET N H sing N N 209 MET N H2 sing N N 210 MET CA C sing N N 211 MET CA CB sing N N 212 MET CA HA sing N N 213 MET C O doub N N 214 MET C OXT sing N N 215 MET CB CG sing N N 216 MET CB HB2 sing N N 217 MET CB HB3 sing N N 218 MET CG SD sing N N 219 MET CG HG2 sing N N 220 MET CG HG3 sing N N 221 MET SD CE sing N N 222 MET CE HE1 sing N N 223 MET CE HE2 sing N N 224 MET CE HE3 sing N N 225 MET OXT HXT sing N N 226 PHE N CA sing N N 227 PHE N H sing N N 228 PHE N H2 sing N N 229 PHE CA C sing N N 230 PHE CA CB sing N N 231 PHE CA HA sing N N 232 PHE C O doub N N 233 PHE C OXT sing N N 234 PHE CB CG sing N N 235 PHE CB HB2 sing N N 236 PHE CB HB3 sing N N 237 PHE CG CD1 doub Y N 238 PHE CG CD2 sing Y N 239 PHE CD1 CE1 sing Y N 240 PHE CD1 HD1 sing N N 241 PHE CD2 CE2 doub Y N 242 PHE CD2 HD2 sing N N 243 PHE CE1 CZ doub Y N 244 PHE CE1 HE1 sing N N 245 PHE CE2 CZ sing Y N 246 PHE CE2 HE2 sing N N 247 PHE CZ HZ sing N N 248 PHE OXT HXT sing N N 249 PRO N CA sing N N 250 PRO N CD sing N N 251 PRO N H sing N N 252 PRO CA C sing N N 253 PRO CA CB sing N N 254 PRO CA HA sing N N 255 PRO C O doub N N 256 PRO C OXT sing N N 257 PRO CB CG sing N N 258 PRO CB HB2 sing N N 259 PRO CB HB3 sing N N 260 PRO CG CD sing N N 261 PRO CG HG2 sing N N 262 PRO CG HG3 sing N N 263 PRO CD HD2 sing N N 264 PRO CD HD3 sing N N 265 PRO OXT HXT sing N N 266 SER N CA sing N N 267 SER N H sing N N 268 SER N H2 sing N N 269 SER CA C sing N N 270 SER CA CB sing N N 271 SER CA HA sing N N 272 SER C O doub N N 273 SER C OXT sing N N 274 SER CB OG sing N N 275 SER CB HB2 sing N N 276 SER CB HB3 sing N N 277 SER OG HG sing N N 278 SER OXT HXT sing N N 279 SO4 S O1 doub N N 280 SO4 S O2 doub N N 281 SO4 S O3 sing N N 282 SO4 S O4 sing N N 283 THR N CA sing N N 284 THR N H sing N N 285 THR N H2 sing N N 286 THR CA C sing N N 287 THR CA CB sing N N 288 THR CA HA sing N N 289 THR C O doub N N 290 THR C OXT sing N N 291 THR CB OG1 sing N N 292 THR CB CG2 sing N N 293 THR CB HB sing N N 294 THR OG1 HG1 sing N N 295 THR CG2 HG21 sing N N 296 THR CG2 HG22 sing N N 297 THR CG2 HG23 sing N N 298 THR OXT HXT sing N N 299 TRP N CA sing N N 300 TRP N H sing N N 301 TRP N H2 sing N N 302 TRP CA C sing N N 303 TRP CA CB sing N N 304 TRP CA HA sing N N 305 TRP C O doub N N 306 TRP C OXT sing N N 307 TRP CB CG sing N N 308 TRP CB HB2 sing N N 309 TRP CB HB3 sing N N 310 TRP CG CD1 doub Y N 311 TRP CG CD2 sing Y N 312 TRP CD1 NE1 sing Y N 313 TRP CD1 HD1 sing N N 314 TRP CD2 CE2 doub Y N 315 TRP CD2 CE3 sing Y N 316 TRP NE1 CE2 sing Y N 317 TRP NE1 HE1 sing N N 318 TRP CE2 CZ2 sing Y N 319 TRP CE3 CZ3 doub Y N 320 TRP CE3 HE3 sing N N 321 TRP CZ2 CH2 doub Y N 322 TRP CZ2 HZ2 sing N N 323 TRP CZ3 CH2 sing Y N 324 TRP CZ3 HZ3 sing N N 325 TRP CH2 HH2 sing N N 326 TRP OXT HXT sing N N 327 TYR N CA sing N N 328 TYR N H sing N N 329 TYR N H2 sing N N 330 TYR CA C sing N N 331 TYR CA CB sing N N 332 TYR CA HA sing N N 333 TYR C O doub N N 334 TYR C OXT sing N N 335 TYR CB CG sing N N 336 TYR CB HB2 sing N N 337 TYR CB HB3 sing N N 338 TYR CG CD1 doub Y N 339 TYR CG CD2 sing Y N 340 TYR CD1 CE1 sing Y N 341 TYR CD1 HD1 sing N N 342 TYR CD2 CE2 doub Y N 343 TYR CD2 HD2 sing N N 344 TYR CE1 CZ doub Y N 345 TYR CE1 HE1 sing N N 346 TYR CE2 CZ sing Y N 347 TYR CE2 HE2 sing N N 348 TYR CZ OH sing N N 349 TYR OH HH sing N N 350 TYR OXT HXT sing N N 351 VAL N CA sing N N 352 VAL N H sing N N 353 VAL N H2 sing N N 354 VAL CA C sing N N 355 VAL CA CB sing N N 356 VAL CA HA sing N N 357 VAL C O doub N N 358 VAL C OXT sing N N 359 VAL CB CG1 sing N N 360 VAL CB CG2 sing N N 361 VAL CB HB sing N N 362 VAL CG1 HG11 sing N N 363 VAL CG1 HG12 sing N N 364 VAL CG1 HG13 sing N N 365 VAL CG2 HG21 sing N N 366 VAL CG2 HG22 sing N N 367 VAL CG2 HG23 sing N N 368 VAL OXT HXT sing N N 369 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 '(4S,5S)-1,2-DITHIANE-4,5-DIOL' D1D 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1ERT _pdbx_initial_refinement_model.details ? #