HEADER HYDROLASE 30-MAR-10 3MDU TITLE THE STRUCTURE OF N-FORMIMINO-L-GLUTAMATE IMINOHYDROLASE FROM TITLE 2 PSEUDOMONAS AERUGINOSA COMPLEXED WITH N-GUANIDINO-L-GLUTAMATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: N-FORMIMINO-L-GLUTAMATE IMINOHYDROLASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: PA5106; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS AMONOHYDRALASE FAMILY, N-FORMIMINO-L-GLUTAMATE IMINOHYDROLASE, N- KEYWDS 2 GUANIDINO-L-GLUTAMATE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.A.FEDOROV,E.V.FEDOROV,R.MARTI-ARBONA,F.M.RAUSHEL,S.C.ALMO REVDAT 5 21-FEB-24 3MDU 1 REMARK LINK REVDAT 4 11-FEB-15 3MDU 1 JRNL REVDAT 3 28-JAN-15 3MDU 1 JRNL REVDAT 2 21-JAN-15 3MDU 1 JRNL VERSN REVDAT 1 09-MAR-11 3MDU 0 JRNL AUTH A.A.FEDOROV,R.MARTI-ARBONA,V.V.NEMMARA,D.HITCHCOCK, JRNL AUTH 2 E.V.FEDOROV,S.C.ALMO,F.M.RAUSHEL JRNL TITL STRUCTURE OF N-FORMIMINO-L-GLUTAMATE IMINOHYDROLASE FROM JRNL TITL 2 PSEUDOMONAS AERUGINOSA. JRNL REF BIOCHEMISTRY V. 54 890 2015 JRNL REFN ISSN 0006-2960 JRNL PMID 25559274 JRNL DOI 10.1021/BI501299Y REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.5_2) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.43 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 3 NUMBER OF REFLECTIONS : 102752 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5136 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.4377 - 4.3483 0.99 3702 178 0.1830 0.1680 REMARK 3 2 4.3483 - 3.4523 1.00 3571 175 0.1500 0.1681 REMARK 3 3 3.4523 - 3.0162 1.00 3517 190 0.1767 0.1801 REMARK 3 4 3.0162 - 2.7405 1.00 3494 187 0.1704 0.1715 REMARK 3 5 2.7405 - 2.5442 1.00 3474 188 0.1751 0.1965 REMARK 3 6 2.5442 - 2.3942 0.99 3415 227 0.1724 0.1739 REMARK 3 7 2.3942 - 2.2743 1.00 3434 210 0.1663 0.1750 REMARK 3 8 2.2743 - 2.1753 0.99 3441 176 0.1661 0.1800 REMARK 3 9 2.1753 - 2.0916 1.00 3463 170 0.1693 0.1725 REMARK 3 10 2.0916 - 2.0194 1.00 3478 155 0.1686 0.1941 REMARK 3 11 2.0194 - 1.9563 0.99 3458 166 0.1725 0.2068 REMARK 3 12 1.9563 - 1.9004 1.00 3427 194 0.1742 0.2083 REMARK 3 13 1.9004 - 1.8503 1.00 3456 169 0.1797 0.1750 REMARK 3 14 1.8503 - 1.8052 1.00 3446 181 0.1682 0.1806 REMARK 3 15 1.8052 - 1.7642 1.00 3426 181 0.1739 0.1946 REMARK 3 16 1.7642 - 1.7266 1.00 3443 171 0.1879 0.2051 REMARK 3 17 1.7266 - 1.6921 1.00 3432 192 0.1889 0.2151 REMARK 3 18 1.6921 - 1.6602 1.00 3421 185 0.1855 0.2263 REMARK 3 19 1.6602 - 1.6305 1.00 3441 177 0.1819 0.1867 REMARK 3 20 1.6305 - 1.6029 1.00 3440 166 0.1844 0.1869 REMARK 3 21 1.6029 - 1.5770 0.99 3391 193 0.1857 0.2059 REMARK 3 22 1.5770 - 1.5528 0.96 3278 189 0.2017 0.2276 REMARK 3 23 1.5528 - 1.5299 0.92 3132 165 0.2082 0.2267 REMARK 3 24 1.5299 - 1.5084 0.88 3034 146 0.2254 0.2249 REMARK 3 25 1.5084 - 1.4880 0.84 2892 165 0.2345 0.2272 REMARK 3 26 1.4880 - 1.4687 0.80 2765 130 0.2465 0.2495 REMARK 3 27 1.4687 - 1.4503 0.77 2630 148 0.2661 0.2816 REMARK 3 28 1.4503 - 1.4328 0.73 2514 122 0.2833 0.3017 REMARK 3 29 1.4328 - 1.4162 0.69 2364 126 0.3126 0.3489 REMARK 3 30 1.4162 - 1.4003 0.65 2237 114 0.3371 0.3410 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 59.75 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.04 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.75880 REMARK 3 B22 (A**2) : -3.75880 REMARK 3 B33 (A**2) : 7.51750 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3550 REMARK 3 ANGLE : 1.053 4814 REMARK 3 CHIRALITY : 0.074 516 REMARK 3 PLANARITY : 0.006 645 REMARK 3 DIHEDRAL : 16.384 1279 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3MDU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-MAR-10. REMARK 100 THE DEPOSITION ID IS D_1000058421. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-SEP-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 102752 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 35.426 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.1M SODIUM MALONATE, 0.1M HEPES, 0.5% REMARK 280 JEFFAMINE, PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 66.60400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 66.60400 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.41750 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 66.60400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 31.20875 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 66.60400 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 93.62625 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 66.60400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 93.62625 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 66.60400 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 31.20875 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 66.60400 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 66.60400 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 62.41750 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 66.60400 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 66.60400 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 62.41750 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 66.60400 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 93.62625 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 66.60400 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 31.20875 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 66.60400 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 31.20875 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 66.60400 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 93.62625 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 66.60400 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 66.60400 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 62.41750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 487 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 756 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LEU A 452 REMARK 465 ASP A 453 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 73 145.95 -174.63 REMARK 500 HIS A 269 -73.05 77.02 REMARK 500 ASP A 320 -98.65 59.02 REMARK 500 SER A 326 113.24 -160.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 454 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 56 NE2 REMARK 620 2 HIS A 58 NE2 99.8 REMARK 620 3 HIS A 232 NE2 93.8 104.9 REMARK 620 4 ASP A 320 OD1 86.3 83.6 171.4 REMARK 620 5 HOH A 495 O 116.3 138.6 92.8 79.5 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 454 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NGQ A 455 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 456 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 457 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3MDW RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH ANOTHER LIGAND DBREF 3MDU A 1 453 UNP Q9HU77 Q9HU77_PSEAE 1 453 SEQRES 1 A 453 MET SER ALA ILE PHE ALA GLU ARG ALA LEU LEU PRO GLU SEQRES 2 A 453 GLY TRP ALA ARG ASN VAL ARG PHE GLU ILE SER ALA ASP SEQRES 3 A 453 GLY VAL LEU ALA GLU ILE ARG PRO ASP ALA ASN ALA ASP SEQRES 4 A 453 GLY ALA GLU ARG LEU GLY GLY ALA VAL LEU PRO GLY MET SEQRES 5 A 453 PRO ASN LEU HIS SER HIS ALA PHE GLN ARG ALA MET ALA SEQRES 6 A 453 GLY LEU ALA GLU VAL ALA GLY ASN PRO ASN ASP SER PHE SEQRES 7 A 453 TRP THR TRP ARG GLU LEU MET TYR ARG MET VAL ALA ARG SEQRES 8 A 453 LEU SER PRO GLU GLN ILE GLU VAL ILE ALA CYS GLN LEU SEQRES 9 A 453 TYR ILE GLU MET LEU LYS ALA GLY TYR THR ALA VAL ALA SEQRES 10 A 453 GLU PHE HIS TYR VAL HIS HIS ASP LEU ASP GLY ARG SER SEQRES 11 A 453 TYR ALA ASP PRO ALA GLU LEU SER LEU ARG ILE SER ARG SEQRES 12 A 453 ALA ALA SER ALA ALA GLY ILE GLY LEU THR LEU LEU PRO SEQRES 13 A 453 VAL LEU TYR SER HIS ALA GLY PHE GLY GLY GLN PRO ALA SEQRES 14 A 453 SER GLU GLY GLN ARG ARG PHE ILE ASN GLY SER GLU ALA SEQRES 15 A 453 TYR LEU GLU LEU LEU GLN ARG LEU ARG ALA PRO LEU GLU SEQRES 16 A 453 ALA ALA GLY HIS SER LEU GLY LEU CYS PHE HIS SER LEU SEQRES 17 A 453 ARG ALA VAL THR PRO GLN GLN ILE ALA THR VAL LEU ALA SEQRES 18 A 453 ALA GLY HIS ASP ASP LEU PRO VAL HIS ILE HIS ILE ALA SEQRES 19 A 453 GLU GLN GLN LYS GLU VAL ASP ASP CYS GLN ALA TRP SER SEQRES 20 A 453 GLY ARG ARG PRO LEU GLN TRP LEU TYR GLU ASN VAL ALA SEQRES 21 A 453 VAL ASP GLN ARG TRP CYS LEU VAL HIS ALA THR HIS ALA SEQRES 22 A 453 ASP PRO ALA GLU VAL ALA ALA MET ALA ARG SER GLY ALA SEQRES 23 A 453 VAL ALA GLY LEU CYS LEU SER THR GLU ALA ASN LEU GLY SEQRES 24 A 453 ASP GLY ILE PHE PRO ALA THR ASP PHE LEU ALA GLN GLY SEQRES 25 A 453 GLY ARG LEU GLY ILE GLY SER ASP SER HIS VAL SER LEU SEQRES 26 A 453 SER VAL VAL GLU GLU LEU ARG TRP LEU GLU TYR GLY GLN SEQRES 27 A 453 ARG LEU ARG ASP ARG LYS ARG ASN ARG LEU TYR ARG ASP SEQRES 28 A 453 ASP GLN PRO MET ILE GLY ARG THR LEU TYR ASP ALA ALA SEQRES 29 A 453 LEU ALA GLY GLY ALA GLN ALA LEU GLY GLN PRO ILE GLY SEQRES 30 A 453 SER LEU ALA VAL GLY ARG ARG ALA ASP LEU LEU VAL LEU SEQRES 31 A 453 ASP GLY ASN ASP PRO TYR LEU ALA SER ALA GLU GLY ASP SEQRES 32 A 453 ALA LEU LEU ASN ARG TRP LEU PHE ALA GLY GLY ASP ARG SEQRES 33 A 453 GLN VAL ARG ASP VAL MET VAL ALA GLY ARG TRP VAL VAL SEQRES 34 A 453 ARG ASP GLY ARG HIS ALA GLY GLU GLU ARG SER ALA ARG SEQRES 35 A 453 ALA PHE VAL GLN VAL LEU GLY GLU LEU LEU ASP HET ZN A 454 1 HET NGQ A 455 13 HET GOL A 456 6 HET GOL A 457 6 HETNAM ZN ZINC ION HETNAM NGQ N-CARBAMIMIDOYL-L-GLUTAMIC ACID HETNAM GOL GLYCEROL HETSYN NGQ N-GUANIDINO-L-GLUTAMATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 ZN ZN 2+ FORMUL 3 NGQ C6 H11 N3 O4 FORMUL 4 GOL 2(C3 H8 O3) FORMUL 6 HOH *372(H2 O) HELIX 1 1 HIS A 58 ALA A 65 5 8 HELIX 2 2 SER A 77 ALA A 90 1 14 HELIX 3 3 SER A 93 ALA A 111 1 19 HELIX 4 4 ALA A 135 GLY A 149 1 15 HELIX 5 5 SER A 170 ILE A 177 5 8 HELIX 6 6 GLY A 179 ALA A 197 1 19 HELIX 7 7 THR A 212 ALA A 221 1 10 HELIX 8 8 GLN A 236 GLY A 248 1 13 HELIX 9 9 ARG A 250 VAL A 259 1 10 HELIX 10 10 ASP A 274 GLY A 285 1 12 HELIX 11 11 CYS A 291 LEU A 298 1 8 HELIX 12 12 PRO A 304 GLN A 311 1 8 HELIX 13 13 SER A 326 ARG A 343 1 18 HELIX 14 14 MET A 355 GLY A 373 1 19 HELIX 15 15 ASP A 394 SER A 399 1 6 HELIX 16 16 GLU A 401 GLY A 413 1 13 HELIX 17 17 GLY A 414 ARG A 416 5 3 HELIX 18 18 GLY A 436 LEU A 451 1 16 SHEET 1 A 4 LEU A 29 ARG A 33 0 SHEET 2 A 4 GLY A 14 ILE A 23 -1 N GLU A 22 O ALA A 30 SHEET 3 A 4 ALA A 3 LEU A 11 -1 N ILE A 4 O PHE A 21 SHEET 4 A 4 GLU A 42 ARG A 43 1 O GLU A 42 N PHE A 5 SHEET 1 B 4 VAL A 48 PRO A 50 0 SHEET 2 B 4 LEU A 387 LEU A 390 -1 O LEU A 388 N LEU A 49 SHEET 3 B 4 VAL A 418 VAL A 423 -1 O MET A 422 N LEU A 387 SHEET 4 B 4 ARG A 426 VAL A 429 -1 O VAL A 428 N VAL A 421 SHEET 1 C 4 MET A 52 SER A 57 0 SHEET 2 C 4 TYR A 113 HIS A 120 1 O ALA A 115 N ASN A 54 SHEET 3 C 4 GLY A 151 PRO A 156 1 O LEU A 155 N GLU A 118 SHEET 4 C 4 SER A 200 LEU A 201 1 O SER A 200 N LEU A 152 SHEET 1 D 5 LEU A 203 SER A 207 0 SHEET 2 D 5 VAL A 229 ILE A 233 1 O HIS A 230 N PHE A 205 SHEET 3 D 5 TRP A 265 HIS A 269 1 O VAL A 268 N ILE A 231 SHEET 4 D 5 VAL A 287 LEU A 290 1 O GLY A 289 N HIS A 269 SHEET 5 D 5 ARG A 314 ILE A 317 1 O ARG A 314 N ALA A 288 LINK NE2 HIS A 56 ZN ZN A 454 1555 1555 2.07 LINK NE2 HIS A 58 ZN ZN A 454 1555 1555 2.06 LINK NE2 HIS A 232 ZN ZN A 454 1555 1555 2.15 LINK OD1 ASP A 320 ZN ZN A 454 1555 1555 2.54 LINK ZN ZN A 454 O HOH A 495 1555 1555 1.95 SITE 1 AC1 5 HIS A 56 HIS A 58 HIS A 232 ASP A 320 SITE 2 AC1 5 HOH A 495 SITE 1 AC2 14 HIS A 58 GLN A 61 PHE A 78 TRP A 81 SITE 2 AC2 14 ARG A 82 TYR A 121 HIS A 206 ARG A 209 SITE 3 AC2 14 GLU A 235 LEU A 298 HOH A 495 HOH A 499 SITE 4 AC2 14 HOH A 514 HOH A 562 SITE 1 AC3 8 LEU A 126 ASP A 127 GLN A 446 GLU A 450 SITE 2 AC3 8 HOH A 575 HOH A 595 HOH A 632 HOH A 753 SITE 1 AC4 5 GLU A 98 ARG A 129 ALA A 147 HOH A 573 SITE 2 AC4 5 HOH A 740 CRYST1 133.208 133.208 124.835 90.00 90.00 90.00 I 41 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007507 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007507 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008011 0.00000