data_3MFK # _entry.id 3MFK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3MFK pdb_00003mfk 10.2210/pdb3mfk/pdb NDB NA0490 ? ? RCSB RCSB058482 ? ? WWPDB D_1000058482 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3MFK _pdbx_database_status.recvd_initial_deposition_date 2010-04-02 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Babayeva, N.D.' 1 'Mino, K.' 2 'Tahirov, T.H.' 3 # _citation.id primary _citation.title 'Structural basis of Ets1 cooperative binding to palindromic sequences on stromelysin-1 promoter DNA.' _citation.journal_abbrev 'Cell Cycle' _citation.journal_volume 9 _citation.page_first 3054 _citation.page_last 3062 _citation.year 2010 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1538-4101 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20686355 _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Babayeva, N.D.' 1 ? primary 'Wilder, P.J.' 2 ? primary 'Shiina, M.' 3 ? primary 'Mino, K.' 4 ? primary 'Desler, M.' 5 ? primary 'Ogata, K.' 6 ? primary 'Rizzino, A.' 7 ? primary 'Tahirov, T.H.' 8 ? # _cell.entry_id 3MFK _cell.length_a 92.812 _cell.length_b 99.153 _cell.length_c 76.496 _cell.angle_alpha 90.00 _cell.angle_beta 108.14 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3MFK _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein C-ets-1' 18731.172 2 ? ? 'UNP residues 280-441' ? 2 polymer syn 'stromelysin-1 promoter DNA' 4914.189 1 ? ? ? 'stromelysin-1 promoter DNA containing palindromic Ets-binding sequences' 3 polymer syn 'stromelysin-1 promoter DNA' 4883.180 1 ? ? ? 'stromelysin-1 promoter DNA containing palindromic Ets-binding sequences' 4 water nat water 18.015 27 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name p54 # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;VPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGD GWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDA DE ; ;VPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGD GWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDA DE ; A,B ? 2 polydeoxyribonucleotide no no '(DG)(DC)(DA)(DG)(DG)(DA)(DA)(DG)(DT)(DG)(DC)(DT)(DT)(DC)(DC)(DT)' GCAGGAAGTGCTTCCT C ? 3 polydeoxyribonucleotide no no '(DC)(DA)(DG)(DG)(DA)(DA)(DG)(DC)(DA)(DC)(DT)(DT)(DC)(DC)(DT)(DG)' CAGGAAGCACTTCCTG D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 PRO n 1 3 SER n 1 4 TYR n 1 5 ASP n 1 6 SER n 1 7 PHE n 1 8 ASP n 1 9 SER n 1 10 GLU n 1 11 ASP n 1 12 TYR n 1 13 PRO n 1 14 ALA n 1 15 ALA n 1 16 LEU n 1 17 PRO n 1 18 ASN n 1 19 HIS n 1 20 LYS n 1 21 PRO n 1 22 LYS n 1 23 GLY n 1 24 THR n 1 25 PHE n 1 26 LYS n 1 27 ASP n 1 28 TYR n 1 29 VAL n 1 30 ARG n 1 31 ASP n 1 32 ARG n 1 33 ALA n 1 34 ASP n 1 35 LEU n 1 36 ASN n 1 37 LYS n 1 38 ASP n 1 39 LYS n 1 40 PRO n 1 41 VAL n 1 42 ILE n 1 43 PRO n 1 44 ALA n 1 45 ALA n 1 46 ALA n 1 47 LEU n 1 48 ALA n 1 49 GLY n 1 50 TYR n 1 51 THR n 1 52 GLY n 1 53 SER n 1 54 GLY n 1 55 PRO n 1 56 ILE n 1 57 GLN n 1 58 LEU n 1 59 TRP n 1 60 GLN n 1 61 PHE n 1 62 LEU n 1 63 LEU n 1 64 GLU n 1 65 LEU n 1 66 LEU n 1 67 THR n 1 68 ASP n 1 69 LYS n 1 70 SER n 1 71 CYS n 1 72 GLN n 1 73 SER n 1 74 PHE n 1 75 ILE n 1 76 SER n 1 77 TRP n 1 78 THR n 1 79 GLY n 1 80 ASP n 1 81 GLY n 1 82 TRP n 1 83 GLU n 1 84 PHE n 1 85 LYS n 1 86 LEU n 1 87 SER n 1 88 ASP n 1 89 PRO n 1 90 ASP n 1 91 GLU n 1 92 VAL n 1 93 ALA n 1 94 ARG n 1 95 ARG n 1 96 TRP n 1 97 GLY n 1 98 LYS n 1 99 ARG n 1 100 LYS n 1 101 ASN n 1 102 LYS n 1 103 PRO n 1 104 LYS n 1 105 MET n 1 106 ASN n 1 107 TYR n 1 108 GLU n 1 109 LYS n 1 110 LEU n 1 111 SER n 1 112 ARG n 1 113 GLY n 1 114 LEU n 1 115 ARG n 1 116 TYR n 1 117 TYR n 1 118 TYR n 1 119 ASP n 1 120 LYS n 1 121 ASN n 1 122 ILE n 1 123 ILE n 1 124 HIS n 1 125 LYS n 1 126 THR n 1 127 ALA n 1 128 GLY n 1 129 LYS n 1 130 ARG n 1 131 TYR n 1 132 VAL n 1 133 TYR n 1 134 ARG n 1 135 PHE n 1 136 VAL n 1 137 CYS n 1 138 ASP n 1 139 LEU n 1 140 GLN n 1 141 SER n 1 142 LEU n 1 143 LEU n 1 144 GLY n 1 145 TYR n 1 146 THR n 1 147 PRO n 1 148 GLU n 1 149 GLU n 1 150 LEU n 1 151 HIS n 1 152 ALA n 1 153 MET n 1 154 LEU n 1 155 ASP n 1 156 VAL n 1 157 LYS n 1 158 PRO n 1 159 ASP n 1 160 ALA n 1 161 ASP n 1 162 GLU n 2 1 DG n 2 2 DC n 2 3 DA n 2 4 DG n 2 5 DG n 2 6 DA n 2 7 DA n 2 8 DG n 2 9 DT n 2 10 DG n 2 11 DC n 2 12 DT n 2 13 DT n 2 14 DC n 2 15 DC n 2 16 DT n 3 1 DC n 3 2 DA n 3 3 DG n 3 4 DG n 3 5 DA n 3 6 DA n 3 7 DG n 3 8 DC n 3 9 DA n 3 10 DC n 3 11 DT n 3 12 DT n 3 13 DC n 3 14 DC n 3 15 DT n 3 16 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ETS1, EWSR2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pEts280-441 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'stromelysin-1 promoter DNA sequence' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP ETS1_HUMAN P14921 1 ;VPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGD GWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDA DE ; 280 ? 2 PDB 3MFK 3MFK 2 ? ? ? 3 PDB 3MFK 3MFK 3 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3MFK A 1 ? 162 ? P14921 280 ? 441 ? 280 441 2 1 3MFK B 1 ? 162 ? P14921 280 ? 441 ? 280 441 3 2 3MFK C 1 ? 16 ? 3MFK 1 ? 16 ? 1 16 4 3 3MFK D 1 ? 16 ? 3MFK 101 ? 116 ? 101 116 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3MFK _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.54 _exptl_crystal.density_percent_sol 65.24 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details ;15 mM ammonium chloride, 15 mM magnesium chloride, 0.7 M NDSB-195, 40 mM MES buffer (pH 6.5) and 11.5% v/v 2-Propanol, VAPOR DIFFUSION, SITTING DROP, temperature 295 K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2008-07-17 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9793 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9793 # _reflns.entry_id 3MFK _reflns.observed_criterion_sigma_I -2 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 40 _reflns.d_resolution_high 3 _reflns.number_obs 13212 _reflns.number_all ? _reflns.percent_possible_obs 97.9 _reflns.pdbx_Rmerge_I_obs 0.067 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 29.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.00 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 3.00 _reflns_shell.d_res_low 3.11 _reflns_shell.percent_possible_all 96.1 _reflns_shell.Rmerge_I_obs 0.438 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.46 _reflns_shell.pdbx_redundancy 2.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1292 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3MFK _refine.ls_number_reflns_obs 12574 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 3197409.06 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 36.35 _refine.ls_d_res_high 3.00 _refine.ls_percent_reflns_obs 94.7 _refine.ls_R_factor_obs 0.243 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.243 _refine.ls_R_factor_R_free 0.289 _refine.ls_R_factor_R_free_error 0.011 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 631 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 71.7 _refine.aniso_B[1][1] -0.06 _refine.aniso_B[2][2] 3.15 _refine.aniso_B[3][3] -3.09 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 7.91 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.294203 _refine.solvent_model_param_bsol 34.3101 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'pdb entry 1gvj' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3MFK _refine_analyze.Luzzati_coordinate_error_obs 0.46 _refine_analyze.Luzzati_sigma_a_obs 0.76 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.53 _refine_analyze.Luzzati_sigma_a_free 0.85 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2247 _refine_hist.pdbx_number_atoms_nucleic_acid 650 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 27 _refine_hist.number_atoms_total 2924 _refine_hist.d_res_high 3.00 _refine_hist.d_res_low 36.35 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.008 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 20.9 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.01 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 4.78 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 7.52 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 6.75 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 9.35 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 3.00 _refine_ls_shell.d_res_low 3.19 _refine_ls_shell.number_reflns_R_work 1827 _refine_ls_shell.R_factor_R_work 0.419 _refine_ls_shell.percent_reflns_obs 87.6 _refine_ls_shell.R_factor_R_free 0.440 _refine_ls_shell.R_factor_R_free_error 0.043 _refine_ls_shell.percent_reflns_R_free 5.5 _refine_ls_shell.number_reflns_R_free 106 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 dna-rna_rep.param dna-rna.top 'X-RAY DIFFRACTION' 3 water_rep.param water.top 'X-RAY DIFFRACTION' # _struct.entry_id 3MFK _struct.title 'Ets1 complex with stromelysin-1 promoter DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3MFK _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text 'Ets1, Ets domain, protein-DNA complex, stromelysin-1, TRANSCRIPTION-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 24 ? ASP A 34 ? THR A 303 ASP A 313 1 ? 11 HELX_P HELX_P2 2 PRO A 43 ? GLY A 52 ? PRO A 322 GLY A 331 1 ? 10 HELX_P HELX_P3 3 GLN A 57 ? THR A 67 ? GLN A 336 THR A 346 1 ? 11 HELX_P HELX_P4 4 ASP A 68 ? PHE A 74 ? ASP A 347 PHE A 353 5 ? 7 HELX_P HELX_P5 5 ASP A 88 ? LYS A 100 ? ASP A 367 LYS A 379 1 ? 13 HELX_P HELX_P6 6 ASN A 106 ? TYR A 116 ? ASN A 385 TYR A 395 1 ? 11 HELX_P HELX_P7 7 TYR A 116 ? ASN A 121 ? TYR A 395 ASN A 400 1 ? 6 HELX_P HELX_P8 8 ASP A 138 ? GLY A 144 ? ASP A 417 GLY A 423 1 ? 7 HELX_P HELX_P9 9 THR A 146 ? LEU A 154 ? THR A 425 LEU A 433 1 ? 9 HELX_P HELX_P10 10 THR B 24 ? ASP B 34 ? THR B 303 ASP B 313 1 ? 11 HELX_P HELX_P11 11 PRO B 43 ? GLY B 52 ? PRO B 322 GLY B 331 1 ? 10 HELX_P HELX_P12 12 GLN B 57 ? LEU B 66 ? GLN B 336 LEU B 345 1 ? 10 HELX_P HELX_P13 13 ASP B 88 ? LYS B 100 ? ASP B 367 LYS B 379 1 ? 13 HELX_P HELX_P14 14 ASN B 106 ? TYR B 116 ? ASN B 385 TYR B 395 1 ? 11 HELX_P HELX_P15 15 ASP B 138 ? GLY B 144 ? ASP B 417 GLY B 423 1 ? 7 HELX_P HELX_P16 16 THR B 146 ? ASP B 155 ? THR B 425 ASP B 434 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? C DC 2 N3 ? ? ? 1_555 D DG 16 N1 ? ? C DC 2 D DG 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DC 2 N4 ? ? ? 1_555 D DG 16 O6 ? ? C DC 2 D DG 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DC 2 O2 ? ? ? 1_555 D DG 16 N2 ? ? C DC 2 D DG 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DA 3 N1 ? ? ? 1_555 D DT 15 N3 ? ? C DA 3 D DT 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DA 3 N6 ? ? ? 1_555 D DT 15 O4 ? ? C DA 3 D DT 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DG 4 N1 ? ? ? 1_555 D DC 14 N3 ? ? C DG 4 D DC 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DG 4 N2 ? ? ? 1_555 D DC 14 O2 ? ? C DG 4 D DC 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DG 4 O6 ? ? ? 1_555 D DC 14 N4 ? ? C DG 4 D DC 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DG 5 N1 ? ? ? 1_555 D DC 13 N3 ? ? C DG 5 D DC 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DG 5 N2 ? ? ? 1_555 D DC 13 O2 ? ? C DG 5 D DC 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DG 5 O6 ? ? ? 1_555 D DC 13 N4 ? ? C DG 5 D DC 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DA 6 N1 ? ? ? 1_555 D DT 12 N3 ? ? C DA 6 D DT 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DA 6 N6 ? ? ? 1_555 D DT 12 O4 ? ? C DA 6 D DT 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DA 7 N1 ? ? ? 1_555 D DT 11 N3 ? ? C DA 7 D DT 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DA 7 N6 ? ? ? 1_555 D DT 11 O4 ? ? C DA 7 D DT 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DG 8 N1 ? ? ? 1_555 D DC 10 N3 ? ? C DG 8 D DC 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DG 8 N2 ? ? ? 1_555 D DC 10 O2 ? ? C DG 8 D DC 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DG 8 O6 ? ? ? 1_555 D DC 10 N4 ? ? C DG 8 D DC 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DT 9 N3 ? ? ? 1_555 D DA 9 N1 ? ? C DT 9 D DA 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DT 9 O4 ? ? ? 1_555 D DA 9 N6 ? ? C DT 9 D DA 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DG 10 N1 ? ? ? 1_555 D DC 8 N3 ? ? C DG 10 D DC 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DG 10 N2 ? ? ? 1_555 D DC 8 O2 ? ? C DG 10 D DC 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DG 10 O6 ? ? ? 1_555 D DC 8 N4 ? ? C DG 10 D DC 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DC 11 N3 ? ? ? 1_555 D DG 7 N1 ? ? C DC 11 D DG 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DC 11 N4 ? ? ? 1_555 D DG 7 O6 ? ? C DC 11 D DG 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DC 11 O2 ? ? ? 1_555 D DG 7 N2 ? ? C DC 11 D DG 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DT 12 N3 ? ? ? 1_555 D DA 6 N1 ? ? C DT 12 D DA 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DT 12 O4 ? ? ? 1_555 D DA 6 N6 ? ? C DT 12 D DA 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DT 13 N3 ? ? ? 1_555 D DA 5 N1 ? ? C DT 13 D DA 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DT 13 O4 ? ? ? 1_555 D DA 5 N6 ? ? C DT 13 D DA 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DC 14 N3 ? ? ? 1_555 D DG 4 N1 ? ? C DC 14 D DG 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DC 14 N4 ? ? ? 1_555 D DG 4 O6 ? ? C DC 14 D DG 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DC 14 O2 ? ? ? 1_555 D DG 4 N2 ? ? C DC 14 D DG 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DC 15 N3 ? ? ? 1_555 D DG 3 N1 ? ? C DC 15 D DG 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DC 15 N4 ? ? ? 1_555 D DG 3 O6 ? ? C DC 15 D DG 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DC 15 O2 ? ? ? 1_555 D DG 3 N2 ? ? C DC 15 D DG 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DT 16 N3 ? ? ? 1_555 D DA 2 N1 ? ? C DT 16 D DA 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DT 16 O4 ? ? ? 1_555 D DA 2 N6 ? ? C DT 16 D DA 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 76 ? TRP A 77 ? SER A 355 TRP A 356 A 2 GLU A 83 ? LYS A 85 ? GLU A 362 LYS A 364 A 3 VAL A 132 ? ARG A 134 ? VAL A 411 ARG A 413 B 1 SER B 76 ? TRP B 77 ? SER B 355 TRP B 356 B 2 GLU B 83 ? LYS B 85 ? GLU B 362 LYS B 364 B 3 VAL B 132 ? PHE B 135 ? VAL B 411 PHE B 414 B 4 ILE B 123 ? LYS B 125 ? ILE B 402 LYS B 404 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER A 76 ? N SER A 355 O LYS A 85 ? O LYS A 364 A 2 3 N PHE A 84 ? N PHE A 363 O TYR A 133 ? O TYR A 412 B 1 2 N SER B 76 ? N SER B 355 O LYS B 85 ? O LYS B 364 B 2 3 N PHE B 84 ? N PHE B 363 O TYR B 133 ? O TYR B 412 B 3 4 O ARG B 134 ? O ARG B 413 N HIS B 124 ? N HIS B 403 # _database_PDB_matrix.entry_id 3MFK _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3MFK _atom_sites.fract_transf_matrix[1][1] 0.010774 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003530 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010085 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013756 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 280 ? ? ? A . n A 1 2 PRO 2 281 ? ? ? A . n A 1 3 SER 3 282 ? ? ? A . n A 1 4 TYR 4 283 ? ? ? A . n A 1 5 ASP 5 284 ? ? ? A . n A 1 6 SER 6 285 ? ? ? A . n A 1 7 PHE 7 286 ? ? ? A . n A 1 8 ASP 8 287 ? ? ? A . n A 1 9 SER 9 288 ? ? ? A . n A 1 10 GLU 10 289 ? ? ? A . n A 1 11 ASP 11 290 ? ? ? A . n A 1 12 TYR 12 291 ? ? ? A . n A 1 13 PRO 13 292 ? ? ? A . n A 1 14 ALA 14 293 ? ? ? A . n A 1 15 ALA 15 294 ? ? ? A . n A 1 16 LEU 16 295 ? ? ? A . n A 1 17 PRO 17 296 ? ? ? A . n A 1 18 ASN 18 297 ? ? ? A . n A 1 19 HIS 19 298 ? ? ? A . n A 1 20 LYS 20 299 ? ? ? A . n A 1 21 PRO 21 300 ? ? ? A . n A 1 22 LYS 22 301 ? ? ? A . n A 1 23 GLY 23 302 302 GLY GLY A . n A 1 24 THR 24 303 303 THR THR A . n A 1 25 PHE 25 304 304 PHE PHE A . n A 1 26 LYS 26 305 305 LYS LYS A . n A 1 27 ASP 27 306 306 ASP ASP A . n A 1 28 TYR 28 307 307 TYR TYR A . n A 1 29 VAL 29 308 308 VAL VAL A . n A 1 30 ARG 30 309 309 ARG ARG A . n A 1 31 ASP 31 310 310 ASP ASP A . n A 1 32 ARG 32 311 311 ARG ARG A . n A 1 33 ALA 33 312 312 ALA ALA A . n A 1 34 ASP 34 313 313 ASP ASP A . n A 1 35 LEU 35 314 314 LEU LEU A . n A 1 36 ASN 36 315 315 ASN ASN A . n A 1 37 LYS 37 316 316 LYS LYS A . n A 1 38 ASP 38 317 317 ASP ASP A . n A 1 39 LYS 39 318 318 LYS LYS A . n A 1 40 PRO 40 319 319 PRO PRO A . n A 1 41 VAL 41 320 320 VAL VAL A . n A 1 42 ILE 42 321 321 ILE ILE A . n A 1 43 PRO 43 322 322 PRO PRO A . n A 1 44 ALA 44 323 323 ALA ALA A . n A 1 45 ALA 45 324 324 ALA ALA A . n A 1 46 ALA 46 325 325 ALA ALA A . n A 1 47 LEU 47 326 326 LEU LEU A . n A 1 48 ALA 48 327 327 ALA ALA A . n A 1 49 GLY 49 328 328 GLY GLY A . n A 1 50 TYR 50 329 329 TYR TYR A . n A 1 51 THR 51 330 330 THR THR A . n A 1 52 GLY 52 331 331 GLY GLY A . n A 1 53 SER 53 332 332 SER SER A . n A 1 54 GLY 54 333 333 GLY GLY A . n A 1 55 PRO 55 334 334 PRO PRO A . n A 1 56 ILE 56 335 335 ILE ILE A . n A 1 57 GLN 57 336 336 GLN GLN A . n A 1 58 LEU 58 337 337 LEU LEU A . n A 1 59 TRP 59 338 338 TRP TRP A . n A 1 60 GLN 60 339 339 GLN GLN A . n A 1 61 PHE 61 340 340 PHE PHE A . n A 1 62 LEU 62 341 341 LEU LEU A . n A 1 63 LEU 63 342 342 LEU LEU A . n A 1 64 GLU 64 343 343 GLU GLU A . n A 1 65 LEU 65 344 344 LEU LEU A . n A 1 66 LEU 66 345 345 LEU LEU A . n A 1 67 THR 67 346 346 THR THR A . n A 1 68 ASP 68 347 347 ASP ASP A . n A 1 69 LYS 69 348 348 LYS LYS A . n A 1 70 SER 70 349 349 SER SER A . n A 1 71 CYS 71 350 350 CYS CYS A . n A 1 72 GLN 72 351 351 GLN GLN A . n A 1 73 SER 73 352 352 SER SER A . n A 1 74 PHE 74 353 353 PHE PHE A . n A 1 75 ILE 75 354 354 ILE ILE A . n A 1 76 SER 76 355 355 SER SER A . n A 1 77 TRP 77 356 356 TRP TRP A . n A 1 78 THR 78 357 357 THR THR A . n A 1 79 GLY 79 358 358 GLY GLY A . n A 1 80 ASP 80 359 359 ASP ASP A . n A 1 81 GLY 81 360 360 GLY GLY A . n A 1 82 TRP 82 361 361 TRP TRP A . n A 1 83 GLU 83 362 362 GLU GLU A . n A 1 84 PHE 84 363 363 PHE PHE A . n A 1 85 LYS 85 364 364 LYS LYS A . n A 1 86 LEU 86 365 365 LEU LEU A . n A 1 87 SER 87 366 366 SER SER A . n A 1 88 ASP 88 367 367 ASP ASP A . n A 1 89 PRO 89 368 368 PRO PRO A . n A 1 90 ASP 90 369 369 ASP ASP A . n A 1 91 GLU 91 370 370 GLU GLU A . n A 1 92 VAL 92 371 371 VAL VAL A . n A 1 93 ALA 93 372 372 ALA ALA A . n A 1 94 ARG 94 373 373 ARG ARG A . n A 1 95 ARG 95 374 374 ARG ARG A . n A 1 96 TRP 96 375 375 TRP TRP A . n A 1 97 GLY 97 376 376 GLY GLY A . n A 1 98 LYS 98 377 377 LYS LYS A . n A 1 99 ARG 99 378 378 ARG ARG A . n A 1 100 LYS 100 379 379 LYS LYS A . n A 1 101 ASN 101 380 380 ASN ASN A . n A 1 102 LYS 102 381 381 LYS LYS A . n A 1 103 PRO 103 382 382 PRO PRO A . n A 1 104 LYS 104 383 383 LYS LYS A . n A 1 105 MET 105 384 384 MET MET A . n A 1 106 ASN 106 385 385 ASN ASN A . n A 1 107 TYR 107 386 386 TYR TYR A . n A 1 108 GLU 108 387 387 GLU GLU A . n A 1 109 LYS 109 388 388 LYS LYS A . n A 1 110 LEU 110 389 389 LEU LEU A . n A 1 111 SER 111 390 390 SER SER A . n A 1 112 ARG 112 391 391 ARG ARG A . n A 1 113 GLY 113 392 392 GLY GLY A . n A 1 114 LEU 114 393 393 LEU LEU A . n A 1 115 ARG 115 394 394 ARG ARG A . n A 1 116 TYR 116 395 395 TYR TYR A . n A 1 117 TYR 117 396 396 TYR TYR A . n A 1 118 TYR 118 397 397 TYR TYR A . n A 1 119 ASP 119 398 398 ASP ASP A . n A 1 120 LYS 120 399 399 LYS LYS A . n A 1 121 ASN 121 400 400 ASN ASN A . n A 1 122 ILE 122 401 401 ILE ILE A . n A 1 123 ILE 123 402 402 ILE ILE A . n A 1 124 HIS 124 403 403 HIS HIS A . n A 1 125 LYS 125 404 404 LYS LYS A . n A 1 126 THR 126 405 405 THR THR A . n A 1 127 ALA 127 406 406 ALA ALA A . n A 1 128 GLY 128 407 407 GLY GLY A . n A 1 129 LYS 129 408 408 LYS LYS A . n A 1 130 ARG 130 409 409 ARG ARG A . n A 1 131 TYR 131 410 410 TYR TYR A . n A 1 132 VAL 132 411 411 VAL VAL A . n A 1 133 TYR 133 412 412 TYR TYR A . n A 1 134 ARG 134 413 413 ARG ARG A . n A 1 135 PHE 135 414 414 PHE PHE A . n A 1 136 VAL 136 415 415 VAL VAL A . n A 1 137 CYS 137 416 416 CYS CYS A . n A 1 138 ASP 138 417 417 ASP ASP A . n A 1 139 LEU 139 418 418 LEU LEU A . n A 1 140 GLN 140 419 419 GLN GLN A . n A 1 141 SER 141 420 420 SER SER A . n A 1 142 LEU 142 421 421 LEU LEU A . n A 1 143 LEU 143 422 422 LEU LEU A . n A 1 144 GLY 144 423 423 GLY GLY A . n A 1 145 TYR 145 424 424 TYR TYR A . n A 1 146 THR 146 425 425 THR THR A . n A 1 147 PRO 147 426 426 PRO PRO A . n A 1 148 GLU 148 427 427 GLU GLU A . n A 1 149 GLU 149 428 428 GLU GLU A . n A 1 150 LEU 150 429 429 LEU LEU A . n A 1 151 HIS 151 430 430 HIS HIS A . n A 1 152 ALA 152 431 431 ALA ALA A . n A 1 153 MET 153 432 432 MET MET A . n A 1 154 LEU 154 433 433 LEU LEU A . n A 1 155 ASP 155 434 434 ASP ASP A . n A 1 156 VAL 156 435 435 VAL VAL A . n A 1 157 LYS 157 436 436 LYS LYS A . n A 1 158 PRO 158 437 437 PRO PRO A . n A 1 159 ASP 159 438 438 ASP ASP A . n A 1 160 ALA 160 439 439 ALA ALA A . n A 1 161 ASP 161 440 ? ? ? A . n A 1 162 GLU 162 441 ? ? ? A . n B 1 1 VAL 1 280 ? ? ? B . n B 1 2 PRO 2 281 ? ? ? B . n B 1 3 SER 3 282 ? ? ? B . n B 1 4 TYR 4 283 ? ? ? B . n B 1 5 ASP 5 284 ? ? ? B . n B 1 6 SER 6 285 ? ? ? B . n B 1 7 PHE 7 286 ? ? ? B . n B 1 8 ASP 8 287 ? ? ? B . n B 1 9 SER 9 288 ? ? ? B . n B 1 10 GLU 10 289 ? ? ? B . n B 1 11 ASP 11 290 ? ? ? B . n B 1 12 TYR 12 291 ? ? ? B . n B 1 13 PRO 13 292 ? ? ? B . n B 1 14 ALA 14 293 ? ? ? B . n B 1 15 ALA 15 294 ? ? ? B . n B 1 16 LEU 16 295 ? ? ? B . n B 1 17 PRO 17 296 ? ? ? B . n B 1 18 ASN 18 297 ? ? ? B . n B 1 19 HIS 19 298 ? ? ? B . n B 1 20 LYS 20 299 ? ? ? B . n B 1 21 PRO 21 300 ? ? ? B . n B 1 22 LYS 22 301 ? ? ? B . n B 1 23 GLY 23 302 302 GLY GLY B . n B 1 24 THR 24 303 303 THR THR B . n B 1 25 PHE 25 304 304 PHE PHE B . n B 1 26 LYS 26 305 305 LYS LYS B . n B 1 27 ASP 27 306 306 ASP ASP B . n B 1 28 TYR 28 307 307 TYR TYR B . n B 1 29 VAL 29 308 308 VAL VAL B . n B 1 30 ARG 30 309 309 ARG ARG B . n B 1 31 ASP 31 310 310 ASP ASP B . n B 1 32 ARG 32 311 311 ARG ARG B . n B 1 33 ALA 33 312 312 ALA ALA B . n B 1 34 ASP 34 313 313 ASP ASP B . n B 1 35 LEU 35 314 314 LEU LEU B . n B 1 36 ASN 36 315 315 ASN ASN B . n B 1 37 LYS 37 316 316 LYS LYS B . n B 1 38 ASP 38 317 317 ASP ASP B . n B 1 39 LYS 39 318 318 LYS LYS B . n B 1 40 PRO 40 319 319 PRO PRO B . n B 1 41 VAL 41 320 320 VAL VAL B . n B 1 42 ILE 42 321 321 ILE ILE B . n B 1 43 PRO 43 322 322 PRO PRO B . n B 1 44 ALA 44 323 323 ALA ALA B . n B 1 45 ALA 45 324 324 ALA ALA B . n B 1 46 ALA 46 325 325 ALA ALA B . n B 1 47 LEU 47 326 326 LEU LEU B . n B 1 48 ALA 48 327 327 ALA ALA B . n B 1 49 GLY 49 328 328 GLY GLY B . n B 1 50 TYR 50 329 329 TYR TYR B . n B 1 51 THR 51 330 330 THR THR B . n B 1 52 GLY 52 331 331 GLY GLY B . n B 1 53 SER 53 332 332 SER SER B . n B 1 54 GLY 54 333 333 GLY GLY B . n B 1 55 PRO 55 334 334 PRO PRO B . n B 1 56 ILE 56 335 335 ILE ILE B . n B 1 57 GLN 57 336 336 GLN GLN B . n B 1 58 LEU 58 337 337 LEU LEU B . n B 1 59 TRP 59 338 338 TRP TRP B . n B 1 60 GLN 60 339 339 GLN GLN B . n B 1 61 PHE 61 340 340 PHE PHE B . n B 1 62 LEU 62 341 341 LEU LEU B . n B 1 63 LEU 63 342 342 LEU LEU B . n B 1 64 GLU 64 343 343 GLU GLU B . n B 1 65 LEU 65 344 344 LEU LEU B . n B 1 66 LEU 66 345 345 LEU LEU B . n B 1 67 THR 67 346 346 THR THR B . n B 1 68 ASP 68 347 347 ASP ASP B . n B 1 69 LYS 69 348 348 LYS LYS B . n B 1 70 SER 70 349 349 SER SER B . n B 1 71 CYS 71 350 350 CYS CYS B . n B 1 72 GLN 72 351 351 GLN GLN B . n B 1 73 SER 73 352 352 SER SER B . n B 1 74 PHE 74 353 353 PHE PHE B . n B 1 75 ILE 75 354 354 ILE ILE B . n B 1 76 SER 76 355 355 SER SER B . n B 1 77 TRP 77 356 356 TRP TRP B . n B 1 78 THR 78 357 357 THR THR B . n B 1 79 GLY 79 358 358 GLY GLY B . n B 1 80 ASP 80 359 359 ASP ASP B . n B 1 81 GLY 81 360 360 GLY GLY B . n B 1 82 TRP 82 361 361 TRP TRP B . n B 1 83 GLU 83 362 362 GLU GLU B . n B 1 84 PHE 84 363 363 PHE PHE B . n B 1 85 LYS 85 364 364 LYS LYS B . n B 1 86 LEU 86 365 365 LEU LEU B . n B 1 87 SER 87 366 366 SER SER B . n B 1 88 ASP 88 367 367 ASP ASP B . n B 1 89 PRO 89 368 368 PRO PRO B . n B 1 90 ASP 90 369 369 ASP ASP B . n B 1 91 GLU 91 370 370 GLU GLU B . n B 1 92 VAL 92 371 371 VAL VAL B . n B 1 93 ALA 93 372 372 ALA ALA B . n B 1 94 ARG 94 373 373 ARG ARG B . n B 1 95 ARG 95 374 374 ARG ARG B . n B 1 96 TRP 96 375 375 TRP TRP B . n B 1 97 GLY 97 376 376 GLY GLY B . n B 1 98 LYS 98 377 377 LYS LYS B . n B 1 99 ARG 99 378 378 ARG ARG B . n B 1 100 LYS 100 379 379 LYS LYS B . n B 1 101 ASN 101 380 380 ASN ASN B . n B 1 102 LYS 102 381 381 LYS LYS B . n B 1 103 PRO 103 382 382 PRO PRO B . n B 1 104 LYS 104 383 383 LYS LYS B . n B 1 105 MET 105 384 384 MET MET B . n B 1 106 ASN 106 385 385 ASN ASN B . n B 1 107 TYR 107 386 386 TYR TYR B . n B 1 108 GLU 108 387 387 GLU GLU B . n B 1 109 LYS 109 388 388 LYS LYS B . n B 1 110 LEU 110 389 389 LEU LEU B . n B 1 111 SER 111 390 390 SER SER B . n B 1 112 ARG 112 391 391 ARG ARG B . n B 1 113 GLY 113 392 392 GLY GLY B . n B 1 114 LEU 114 393 393 LEU LEU B . n B 1 115 ARG 115 394 394 ARG ARG B . n B 1 116 TYR 116 395 395 TYR TYR B . n B 1 117 TYR 117 396 396 TYR TYR B . n B 1 118 TYR 118 397 397 TYR TYR B . n B 1 119 ASP 119 398 398 ASP ASP B . n B 1 120 LYS 120 399 399 LYS LYS B . n B 1 121 ASN 121 400 400 ASN ASN B . n B 1 122 ILE 122 401 401 ILE ILE B . n B 1 123 ILE 123 402 402 ILE ILE B . n B 1 124 HIS 124 403 403 HIS HIS B . n B 1 125 LYS 125 404 404 LYS LYS B . n B 1 126 THR 126 405 405 THR THR B . n B 1 127 ALA 127 406 406 ALA ALA B . n B 1 128 GLY 128 407 407 GLY GLY B . n B 1 129 LYS 129 408 408 LYS LYS B . n B 1 130 ARG 130 409 409 ARG ARG B . n B 1 131 TYR 131 410 410 TYR TYR B . n B 1 132 VAL 132 411 411 VAL VAL B . n B 1 133 TYR 133 412 412 TYR TYR B . n B 1 134 ARG 134 413 413 ARG ARG B . n B 1 135 PHE 135 414 414 PHE PHE B . n B 1 136 VAL 136 415 415 VAL VAL B . n B 1 137 CYS 137 416 416 CYS CYS B . n B 1 138 ASP 138 417 417 ASP ASP B . n B 1 139 LEU 139 418 418 LEU LEU B . n B 1 140 GLN 140 419 419 GLN GLN B . n B 1 141 SER 141 420 420 SER SER B . n B 1 142 LEU 142 421 421 LEU LEU B . n B 1 143 LEU 143 422 422 LEU LEU B . n B 1 144 GLY 144 423 423 GLY GLY B . n B 1 145 TYR 145 424 424 TYR TYR B . n B 1 146 THR 146 425 425 THR THR B . n B 1 147 PRO 147 426 426 PRO PRO B . n B 1 148 GLU 148 427 427 GLU GLU B . n B 1 149 GLU 149 428 428 GLU GLU B . n B 1 150 LEU 150 429 429 LEU LEU B . n B 1 151 HIS 151 430 430 HIS HIS B . n B 1 152 ALA 152 431 431 ALA ALA B . n B 1 153 MET 153 432 432 MET MET B . n B 1 154 LEU 154 433 433 LEU LEU B . n B 1 155 ASP 155 434 434 ASP ASP B . n B 1 156 VAL 156 435 435 VAL VAL B . n B 1 157 LYS 157 436 436 LYS LYS B . n B 1 158 PRO 158 437 437 PRO PRO B . n B 1 159 ASP 159 438 ? ? ? B . n B 1 160 ALA 160 439 ? ? ? B . n B 1 161 ASP 161 440 ? ? ? B . n B 1 162 GLU 162 441 ? ? ? B . n C 2 1 DG 1 1 1 DG DG C . n C 2 2 DC 2 2 2 DC DC C . n C 2 3 DA 3 3 3 DA DA C . n C 2 4 DG 4 4 4 DG DG C . n C 2 5 DG 5 5 5 DG DG C . n C 2 6 DA 6 6 6 DA DA C . n C 2 7 DA 7 7 7 DA DA C . n C 2 8 DG 8 8 8 DG DG C . n C 2 9 DT 9 9 9 DT DT C . n C 2 10 DG 10 10 10 DG DG C . n C 2 11 DC 11 11 11 DC DC C . n C 2 12 DT 12 12 12 DT DT C . n C 2 13 DT 13 13 13 DT DT C . n C 2 14 DC 14 14 14 DC DC C . n C 2 15 DC 15 15 15 DC DC C . n C 2 16 DT 16 16 16 DT DT C . n D 3 1 DC 1 101 101 DC DC D . n D 3 2 DA 2 102 102 DA DA D . n D 3 3 DG 3 103 103 DG DG D . n D 3 4 DG 4 104 104 DG DG D . n D 3 5 DA 5 105 105 DA DA D . n D 3 6 DA 6 106 106 DA DA D . n D 3 7 DG 7 107 107 DG DG D . n D 3 8 DC 8 108 108 DC DC D . n D 3 9 DA 9 109 109 DA DA D . n D 3 10 DC 10 110 110 DC DC D . n D 3 11 DT 11 111 111 DT DT D . n D 3 12 DT 12 112 112 DT DT D . n D 3 13 DC 13 113 113 DC DC D . n D 3 14 DC 14 114 114 DC DC D . n D 3 15 DT 15 115 115 DT DT D . n D 3 16 DG 16 116 116 DG DG D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 HOH 1 1 1 HOH HOH A . E 4 HOH 2 3 3 HOH HOH A . E 4 HOH 3 7 7 HOH HOH A . E 4 HOH 4 9 9 HOH HOH A . E 4 HOH 5 10 10 HOH HOH A . E 4 HOH 6 12 12 HOH HOH A . E 4 HOH 7 14 14 HOH HOH A . E 4 HOH 8 16 16 HOH HOH A . E 4 HOH 9 17 17 HOH HOH A . E 4 HOH 10 20 20 HOH HOH A . E 4 HOH 11 22 22 HOH HOH A . E 4 HOH 12 25 25 HOH HOH A . F 4 HOH 1 13 13 HOH HOH B . F 4 HOH 2 19 19 HOH HOH B . F 4 HOH 3 21 21 HOH HOH B . G 4 HOH 1 17 17 HOH HOH C . G 4 HOH 2 18 18 HOH HOH C . G 4 HOH 3 19 19 HOH HOH C . G 4 HOH 4 20 20 HOH HOH C . G 4 HOH 5 21 21 HOH HOH C . G 4 HOH 6 24 24 HOH HOH C . G 4 HOH 7 26 26 HOH HOH C . H 4 HOH 1 5 5 HOH HOH D . H 4 HOH 2 15 15 HOH HOH D . H 4 HOH 3 18 18 HOH HOH D . H 4 HOH 4 23 23 HOH HOH D . H 4 HOH 5 27 27 HOH HOH D . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5270 ? 1 MORE -30 ? 1 'SSA (A^2)' 18990 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-08-18 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 CNS refinement . ? 2 HKL-2000 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 CNS phasing . ? 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OP1 _pdbx_validate_close_contact.auth_asym_id_1 D _pdbx_validate_close_contact.auth_comp_id_1 DC _pdbx_validate_close_contact.auth_seq_id_1 110 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 D _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 5 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.00 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 9 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 9 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_756 _pdbx_validate_symm_contact.dist 2.05 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N B ASN 315 ? ? CA B ASN 315 ? ? C B ASN 315 ? ? 91.87 111.00 -19.13 2.70 N 2 1 "O4'" C DC 2 ? ? "C1'" C DC 2 ? ? N1 C DC 2 ? ? 110.39 108.30 2.09 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 303 ? ? -85.71 -155.96 2 1 ASN A 315 ? ? -145.15 -64.54 3 1 LYS A 316 ? ? 64.29 -46.38 4 1 PRO A 334 ? ? -47.35 151.72 5 1 ASN A 380 ? ? 58.23 70.95 6 1 ARG A 413 ? ? -161.31 106.11 7 1 CYS A 416 ? ? -71.99 -162.23 8 1 ASP A 417 ? ? -112.80 51.70 9 1 LEU B 314 ? ? -46.74 176.80 10 1 ASN B 315 ? ? 176.68 -35.18 11 1 LYS B 316 ? ? -46.24 -179.56 12 1 ASP B 317 ? ? -92.00 53.03 13 1 SER B 332 ? ? -67.73 14.53 14 1 PRO B 334 ? ? -43.27 168.16 15 1 SER B 355 ? ? -171.77 -175.28 16 1 LEU B 365 ? ? -107.47 79.68 17 1 LYS B 383 ? ? -73.57 22.63 18 1 LYS B 436 ? ? -68.90 -71.35 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A VAL 280 ? A VAL 1 2 1 Y 1 A PRO 281 ? A PRO 2 3 1 Y 1 A SER 282 ? A SER 3 4 1 Y 1 A TYR 283 ? A TYR 4 5 1 Y 1 A ASP 284 ? A ASP 5 6 1 Y 1 A SER 285 ? A SER 6 7 1 Y 1 A PHE 286 ? A PHE 7 8 1 Y 1 A ASP 287 ? A ASP 8 9 1 Y 1 A SER 288 ? A SER 9 10 1 Y 1 A GLU 289 ? A GLU 10 11 1 Y 1 A ASP 290 ? A ASP 11 12 1 Y 1 A TYR 291 ? A TYR 12 13 1 Y 1 A PRO 292 ? A PRO 13 14 1 Y 1 A ALA 293 ? A ALA 14 15 1 Y 1 A ALA 294 ? A ALA 15 16 1 Y 1 A LEU 295 ? A LEU 16 17 1 Y 1 A PRO 296 ? A PRO 17 18 1 Y 1 A ASN 297 ? A ASN 18 19 1 Y 1 A HIS 298 ? A HIS 19 20 1 Y 1 A LYS 299 ? A LYS 20 21 1 Y 1 A PRO 300 ? A PRO 21 22 1 Y 1 A LYS 301 ? A LYS 22 23 1 Y 1 A ASP 440 ? A ASP 161 24 1 Y 1 A GLU 441 ? A GLU 162 25 1 Y 1 B VAL 280 ? B VAL 1 26 1 Y 1 B PRO 281 ? B PRO 2 27 1 Y 1 B SER 282 ? B SER 3 28 1 Y 1 B TYR 283 ? B TYR 4 29 1 Y 1 B ASP 284 ? B ASP 5 30 1 Y 1 B SER 285 ? B SER 6 31 1 Y 1 B PHE 286 ? B PHE 7 32 1 Y 1 B ASP 287 ? B ASP 8 33 1 Y 1 B SER 288 ? B SER 9 34 1 Y 1 B GLU 289 ? B GLU 10 35 1 Y 1 B ASP 290 ? B ASP 11 36 1 Y 1 B TYR 291 ? B TYR 12 37 1 Y 1 B PRO 292 ? B PRO 13 38 1 Y 1 B ALA 293 ? B ALA 14 39 1 Y 1 B ALA 294 ? B ALA 15 40 1 Y 1 B LEU 295 ? B LEU 16 41 1 Y 1 B PRO 296 ? B PRO 17 42 1 Y 1 B ASN 297 ? B ASN 18 43 1 Y 1 B HIS 298 ? B HIS 19 44 1 Y 1 B LYS 299 ? B LYS 20 45 1 Y 1 B PRO 300 ? B PRO 21 46 1 Y 1 B LYS 301 ? B LYS 22 47 1 Y 1 B ASP 438 ? B ASP 159 48 1 Y 1 B ALA 439 ? B ALA 160 49 1 Y 1 B ASP 440 ? B ASP 161 50 1 Y 1 B GLU 441 ? B GLU 162 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 PHE N N N N 393 PHE CA C N S 394 PHE C C N N 395 PHE O O N N 396 PHE CB C N N 397 PHE CG C Y N 398 PHE CD1 C Y N 399 PHE CD2 C Y N 400 PHE CE1 C Y N 401 PHE CE2 C Y N 402 PHE CZ C Y N 403 PHE OXT O N N 404 PHE H H N N 405 PHE H2 H N N 406 PHE HA H N N 407 PHE HB2 H N N 408 PHE HB3 H N N 409 PHE HD1 H N N 410 PHE HD2 H N N 411 PHE HE1 H N N 412 PHE HE2 H N N 413 PHE HZ H N N 414 PHE HXT H N N 415 PRO N N N N 416 PRO CA C N S 417 PRO C C N N 418 PRO O O N N 419 PRO CB C N N 420 PRO CG C N N 421 PRO CD C N N 422 PRO OXT O N N 423 PRO H H N N 424 PRO HA H N N 425 PRO HB2 H N N 426 PRO HB3 H N N 427 PRO HG2 H N N 428 PRO HG3 H N N 429 PRO HD2 H N N 430 PRO HD3 H N N 431 PRO HXT H N N 432 SER N N N N 433 SER CA C N S 434 SER C C N N 435 SER O O N N 436 SER CB C N N 437 SER OG O N N 438 SER OXT O N N 439 SER H H N N 440 SER H2 H N N 441 SER HA H N N 442 SER HB2 H N N 443 SER HB3 H N N 444 SER HG H N N 445 SER HXT H N N 446 THR N N N N 447 THR CA C N S 448 THR C C N N 449 THR O O N N 450 THR CB C N R 451 THR OG1 O N N 452 THR CG2 C N N 453 THR OXT O N N 454 THR H H N N 455 THR H2 H N N 456 THR HA H N N 457 THR HB H N N 458 THR HG1 H N N 459 THR HG21 H N N 460 THR HG22 H N N 461 THR HG23 H N N 462 THR HXT H N N 463 TRP N N N N 464 TRP CA C N S 465 TRP C C N N 466 TRP O O N N 467 TRP CB C N N 468 TRP CG C Y N 469 TRP CD1 C Y N 470 TRP CD2 C Y N 471 TRP NE1 N Y N 472 TRP CE2 C Y N 473 TRP CE3 C Y N 474 TRP CZ2 C Y N 475 TRP CZ3 C Y N 476 TRP CH2 C Y N 477 TRP OXT O N N 478 TRP H H N N 479 TRP H2 H N N 480 TRP HA H N N 481 TRP HB2 H N N 482 TRP HB3 H N N 483 TRP HD1 H N N 484 TRP HE1 H N N 485 TRP HE3 H N N 486 TRP HZ2 H N N 487 TRP HZ3 H N N 488 TRP HH2 H N N 489 TRP HXT H N N 490 TYR N N N N 491 TYR CA C N S 492 TYR C C N N 493 TYR O O N N 494 TYR CB C N N 495 TYR CG C Y N 496 TYR CD1 C Y N 497 TYR CD2 C Y N 498 TYR CE1 C Y N 499 TYR CE2 C Y N 500 TYR CZ C Y N 501 TYR OH O N N 502 TYR OXT O N N 503 TYR H H N N 504 TYR H2 H N N 505 TYR HA H N N 506 TYR HB2 H N N 507 TYR HB3 H N N 508 TYR HD1 H N N 509 TYR HD2 H N N 510 TYR HE1 H N N 511 TYR HE2 H N N 512 TYR HH H N N 513 TYR HXT H N N 514 VAL N N N N 515 VAL CA C N S 516 VAL C C N N 517 VAL O O N N 518 VAL CB C N N 519 VAL CG1 C N N 520 VAL CG2 C N N 521 VAL OXT O N N 522 VAL H H N N 523 VAL H2 H N N 524 VAL HA H N N 525 VAL HB H N N 526 VAL HG11 H N N 527 VAL HG12 H N N 528 VAL HG13 H N N 529 VAL HG21 H N N 530 VAL HG22 H N N 531 VAL HG23 H N N 532 VAL HXT H N N 533 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 SER N CA sing N N 426 SER N H sing N N 427 SER N H2 sing N N 428 SER CA C sing N N 429 SER CA CB sing N N 430 SER CA HA sing N N 431 SER C O doub N N 432 SER C OXT sing N N 433 SER CB OG sing N N 434 SER CB HB2 sing N N 435 SER CB HB3 sing N N 436 SER OG HG sing N N 437 SER OXT HXT sing N N 438 THR N CA sing N N 439 THR N H sing N N 440 THR N H2 sing N N 441 THR CA C sing N N 442 THR CA CB sing N N 443 THR CA HA sing N N 444 THR C O doub N N 445 THR C OXT sing N N 446 THR CB OG1 sing N N 447 THR CB CG2 sing N N 448 THR CB HB sing N N 449 THR OG1 HG1 sing N N 450 THR CG2 HG21 sing N N 451 THR CG2 HG22 sing N N 452 THR CG2 HG23 sing N N 453 THR OXT HXT sing N N 454 TRP N CA sing N N 455 TRP N H sing N N 456 TRP N H2 sing N N 457 TRP CA C sing N N 458 TRP CA CB sing N N 459 TRP CA HA sing N N 460 TRP C O doub N N 461 TRP C OXT sing N N 462 TRP CB CG sing N N 463 TRP CB HB2 sing N N 464 TRP CB HB3 sing N N 465 TRP CG CD1 doub Y N 466 TRP CG CD2 sing Y N 467 TRP CD1 NE1 sing Y N 468 TRP CD1 HD1 sing N N 469 TRP CD2 CE2 doub Y N 470 TRP CD2 CE3 sing Y N 471 TRP NE1 CE2 sing Y N 472 TRP NE1 HE1 sing N N 473 TRP CE2 CZ2 sing Y N 474 TRP CE3 CZ3 doub Y N 475 TRP CE3 HE3 sing N N 476 TRP CZ2 CH2 doub Y N 477 TRP CZ2 HZ2 sing N N 478 TRP CZ3 CH2 sing Y N 479 TRP CZ3 HZ3 sing N N 480 TRP CH2 HH2 sing N N 481 TRP OXT HXT sing N N 482 TYR N CA sing N N 483 TYR N H sing N N 484 TYR N H2 sing N N 485 TYR CA C sing N N 486 TYR CA CB sing N N 487 TYR CA HA sing N N 488 TYR C O doub N N 489 TYR C OXT sing N N 490 TYR CB CG sing N N 491 TYR CB HB2 sing N N 492 TYR CB HB3 sing N N 493 TYR CG CD1 doub Y N 494 TYR CG CD2 sing Y N 495 TYR CD1 CE1 sing Y N 496 TYR CD1 HD1 sing N N 497 TYR CD2 CE2 doub Y N 498 TYR CD2 HD2 sing N N 499 TYR CE1 CZ doub Y N 500 TYR CE1 HE1 sing N N 501 TYR CE2 CZ sing Y N 502 TYR CE2 HE2 sing N N 503 TYR CZ OH sing N N 504 TYR OH HH sing N N 505 TYR OXT HXT sing N N 506 VAL N CA sing N N 507 VAL N H sing N N 508 VAL N H2 sing N N 509 VAL CA C sing N N 510 VAL CA CB sing N N 511 VAL CA HA sing N N 512 VAL C O doub N N 513 VAL C OXT sing N N 514 VAL CB CG1 sing N N 515 VAL CB CG2 sing N N 516 VAL CB HB sing N N 517 VAL CG1 HG11 sing N N 518 VAL CG1 HG12 sing N N 519 VAL CG1 HG13 sing N N 520 VAL CG2 HG21 sing N N 521 VAL CG2 HG22 sing N N 522 VAL CG2 HG23 sing N N 523 VAL OXT HXT sing N N 524 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3MFK 'double helix' 3MFK 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DC 2 1_555 D DG 16 1_555 0.148 -0.090 0.049 -8.211 -1.565 2.197 1 C_DC2:DG116_D C 2 ? D 116 ? 19 1 1 C DA 3 1_555 D DT 15 1_555 -0.042 -0.146 0.106 -11.079 2.953 -3.561 2 C_DA3:DT115_D C 3 ? D 115 ? 20 1 1 C DG 4 1_555 D DC 14 1_555 0.107 -0.245 0.144 3.300 16.656 0.654 3 C_DG4:DC114_D C 4 ? D 114 ? 19 1 1 C DG 5 1_555 D DC 13 1_555 -0.102 -0.091 -0.053 -1.236 0.152 -1.148 4 C_DG5:DC113_D C 5 ? D 113 ? 19 1 1 C DA 6 1_555 D DT 12 1_555 -0.101 -0.074 -0.264 -4.618 -2.018 0.538 5 C_DA6:DT112_D C 6 ? D 112 ? 20 1 1 C DA 7 1_555 D DT 11 1_555 -0.060 0.141 0.052 1.776 -3.847 -1.382 6 C_DA7:DT111_D C 7 ? D 111 ? 20 1 1 C DG 8 1_555 D DC 10 1_555 -0.299 0.070 -0.101 -4.671 -0.192 -1.228 7 C_DG8:DC110_D C 8 ? D 110 ? 19 1 1 C DT 9 1_555 D DA 9 1_555 0.040 -0.019 0.295 -1.593 5.550 2.225 8 C_DT9:DA109_D C 9 ? D 109 ? 20 1 1 C DG 10 1_555 D DC 8 1_555 0.061 -0.171 0.071 10.564 6.424 3.987 9 C_DG10:DC108_D C 10 ? D 108 ? 19 1 1 C DC 11 1_555 D DG 7 1_555 0.092 -0.188 -0.132 9.988 -14.493 1.637 10 C_DC11:DG107_D C 11 ? D 107 ? 19 1 1 C DT 12 1_555 D DA 6 1_555 -0.011 -0.224 0.388 -8.684 -12.570 4.725 11 C_DT12:DA106_D C 12 ? D 106 ? 20 1 1 C DT 13 1_555 D DA 5 1_555 -0.294 -0.120 0.372 -12.340 -9.912 -0.038 12 C_DT13:DA105_D C 13 ? D 105 ? 20 1 1 C DC 14 1_555 D DG 4 1_555 0.359 -0.057 -0.161 -1.330 -4.081 1.049 13 C_DC14:DG104_D C 14 ? D 104 ? 19 1 1 C DC 15 1_555 D DG 3 1_555 0.369 -0.127 -0.248 11.031 -2.272 2.044 14 C_DC15:DG103_D C 15 ? D 103 ? 19 1 1 C DT 16 1_555 D DA 2 1_555 0.058 -0.196 -0.013 15.690 -18.348 -8.239 15 C_DT16:DA102_D C 16 ? D 102 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DC 2 1_555 D DG 16 1_555 C DA 3 1_555 D DT 15 1_555 -0.660 -0.035 3.293 -2.655 14.841 37.467 -1.756 0.654 3.101 22.044 3.943 40.286 1 CC_DC2DA3:DT115DG116_DD C 2 ? D 116 ? C 3 ? D 115 ? 1 C DA 3 1_555 D DT 15 1_555 C DG 4 1_555 D DC 14 1_555 1.004 -0.976 3.036 -0.546 0.059 26.632 -2.133 -2.312 3.013 0.128 1.185 26.638 2 CC_DA3DG4:DC114DT115_DD C 3 ? D 115 ? C 4 ? D 114 ? 1 C DG 4 1_555 D DC 14 1_555 C DG 5 1_555 D DC 13 1_555 -0.808 -0.317 3.458 1.851 5.413 36.386 -1.270 1.541 3.335 8.602 -2.941 36.818 3 CC_DG4DG5:DC113DC114_DD C 4 ? D 114 ? C 5 ? D 113 ? 1 C DG 5 1_555 D DC 13 1_555 C DA 6 1_555 D DT 12 1_555 -0.169 -1.030 3.083 1.475 12.679 28.680 -4.008 0.557 2.412 24.141 -2.809 31.337 4 CC_DG5DA6:DT112DC113_DD C 5 ? D 113 ? C 6 ? D 112 ? 1 C DA 6 1_555 D DT 12 1_555 C DA 7 1_555 D DT 11 1_555 -0.483 -0.649 2.868 -6.149 9.930 32.194 -2.458 -0.017 2.606 17.214 10.660 34.195 5 CC_DA6DA7:DT111DT112_DD C 6 ? D 112 ? C 7 ? D 111 ? 1 C DA 7 1_555 D DT 11 1_555 C DG 8 1_555 D DC 10 1_555 0.024 -0.590 3.454 -4.610 1.577 37.891 -1.111 -0.649 3.402 2.416 7.063 38.191 6 CC_DA7DG8:DC110DT111_DD C 7 ? D 111 ? C 8 ? D 110 ? 1 C DG 8 1_555 D DC 10 1_555 C DT 9 1_555 D DA 9 1_555 -0.868 -1.086 3.277 -3.492 -2.225 26.408 -1.752 0.940 3.439 -4.833 7.585 26.725 7 CC_DG8DT9:DA109DC110_DD C 8 ? D 110 ? C 9 ? D 109 ? 1 C DT 9 1_555 D DA 9 1_555 C DG 10 1_555 D DC 8 1_555 0.418 0.579 3.155 2.808 15.488 29.675 -1.591 -0.254 3.099 27.906 -5.060 33.508 8 CC_DT9DG10:DC108DA109_DD C 9 ? D 109 ? C 10 ? D 108 ? 1 C DG 10 1_555 D DC 8 1_555 C DC 11 1_555 D DG 7 1_555 0.047 0.201 3.220 1.422 3.610 28.453 -0.397 0.221 3.219 7.302 -2.877 28.711 9 CC_DG10DC11:DG107DC108_DD C 10 ? D 108 ? C 11 ? D 107 ? 1 C DC 11 1_555 D DG 7 1_555 C DT 12 1_555 D DA 6 1_555 -0.288 -0.627 3.751 -3.858 4.719 39.559 -1.533 -0.083 3.667 6.922 5.659 40.007 10 CC_DC11DT12:DA106DG107_DD C 11 ? D 107 ? C 12 ? D 106 ? 1 C DT 12 1_555 D DA 6 1_555 C DT 13 1_555 D DA 5 1_555 -0.322 -0.884 3.279 -1.917 -2.793 35.003 -1.040 0.242 3.350 -4.629 3.179 35.161 11 CC_DT12DT13:DA105DA106_DD C 12 ? D 106 ? C 13 ? D 105 ? 1 C DT 13 1_555 D DA 5 1_555 C DC 14 1_555 D DG 4 1_555 -0.227 -0.423 2.957 3.728 4.228 31.795 -1.431 0.998 2.834 7.641 -6.738 32.278 12 CC_DT13DC14:DG104DA105_DD C 13 ? D 105 ? C 14 ? D 104 ? 1 C DC 14 1_555 D DG 4 1_555 C DC 15 1_555 D DG 3 1_555 1.011 0.108 2.874 3.321 2.291 33.053 -0.153 -1.269 2.959 4.009 -5.810 33.292 13 CC_DC14DC15:DG103DG104_DD C 14 ? D 104 ? C 15 ? D 103 ? 1 C DC 15 1_555 D DG 3 1_555 C DT 16 1_555 D DA 2 1_555 -0.763 0.342 3.271 -0.577 1.588 34.014 0.331 1.210 3.295 2.712 0.985 34.055 14 CC_DC15DT16:DA102DG103_DD C 15 ? D 103 ? C 16 ? D 102 ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1GVJ _pdbx_initial_refinement_model.details 'pdb entry 1gvj' #