data_3MGL # _entry.id 3MGL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3MGL RCSB RCSB058519 WWPDB D_1000058519 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC36741.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3MGL _pdbx_database_status.recvd_initial_deposition_date 2010-04-06 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chang, C.' 1 'Marshall, N.' 2 'Bearden, J.' 3 'Joachimiak, A.' 4 'Midwest Center for Structural Genomics (MCSG)' 5 # _citation.id primary _citation.title 'Crystal structure of permease family protein from Vibrio cholerae' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Chang, C.' 1 primary 'Marshall, N.' 2 primary 'Bearden, J.' 3 primary 'Joachimiak, A.' 4 # _cell.entry_id 3MGL _cell.length_a 90.914 _cell.length_b 90.914 _cell.length_c 65.210 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3MGL _symmetry.space_group_name_H-M 'P 4 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Sulfate permease family protein' 14596.197 2 ? ? ? ? 2 non-polymer syn 'IODIDE ION' 126.904 11 ? ? ? ? 3 water nat water 18.015 68 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNAE(MSE)SYELAQHGRSTLPRELAVYALEGPFFFAAAETFERV(MSE)GSIQETPQILILRLKWVPF(MSE)DITGIQ TLEE(MSE)IQSFHKRGIKVLISGANSRVSQKLVKAGIVKLVGEQNVYPVFEGALSAALTEIEAQP ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAEMSYELAQHGRSTLPRELAVYALEGPFFFAAAETFERVMGSIQETPQILILRLKWVPFMDITGIQTLEEMIQSFHKR GIKVLISGANSRVSQKLVKAGIVKLVGEQNVYPVFEGALSAALTEIEAQP ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier APC36741.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 GLU n 1 5 MSE n 1 6 SER n 1 7 TYR n 1 8 GLU n 1 9 LEU n 1 10 ALA n 1 11 GLN n 1 12 HIS n 1 13 GLY n 1 14 ARG n 1 15 SER n 1 16 THR n 1 17 LEU n 1 18 PRO n 1 19 ARG n 1 20 GLU n 1 21 LEU n 1 22 ALA n 1 23 VAL n 1 24 TYR n 1 25 ALA n 1 26 LEU n 1 27 GLU n 1 28 GLY n 1 29 PRO n 1 30 PHE n 1 31 PHE n 1 32 PHE n 1 33 ALA n 1 34 ALA n 1 35 ALA n 1 36 GLU n 1 37 THR n 1 38 PHE n 1 39 GLU n 1 40 ARG n 1 41 VAL n 1 42 MSE n 1 43 GLY n 1 44 SER n 1 45 ILE n 1 46 GLN n 1 47 GLU n 1 48 THR n 1 49 PRO n 1 50 GLN n 1 51 ILE n 1 52 LEU n 1 53 ILE n 1 54 LEU n 1 55 ARG n 1 56 LEU n 1 57 LYS n 1 58 TRP n 1 59 VAL n 1 60 PRO n 1 61 PHE n 1 62 MSE n 1 63 ASP n 1 64 ILE n 1 65 THR n 1 66 GLY n 1 67 ILE n 1 68 GLN n 1 69 THR n 1 70 LEU n 1 71 GLU n 1 72 GLU n 1 73 MSE n 1 74 ILE n 1 75 GLN n 1 76 SER n 1 77 PHE n 1 78 HIS n 1 79 LYS n 1 80 ARG n 1 81 GLY n 1 82 ILE n 1 83 LYS n 1 84 VAL n 1 85 LEU n 1 86 ILE n 1 87 SER n 1 88 GLY n 1 89 ALA n 1 90 ASN n 1 91 SER n 1 92 ARG n 1 93 VAL n 1 94 SER n 1 95 GLN n 1 96 LYS n 1 97 LEU n 1 98 VAL n 1 99 LYS n 1 100 ALA n 1 101 GLY n 1 102 ILE n 1 103 VAL n 1 104 LYS n 1 105 LEU n 1 106 VAL n 1 107 GLY n 1 108 GLU n 1 109 GLN n 1 110 ASN n 1 111 VAL n 1 112 TYR n 1 113 PRO n 1 114 VAL n 1 115 PHE n 1 116 GLU n 1 117 GLY n 1 118 ALA n 1 119 LEU n 1 120 SER n 1 121 ALA n 1 122 ALA n 1 123 LEU n 1 124 THR n 1 125 GLU n 1 126 ILE n 1 127 GLU n 1 128 ALA n 1 129 GLN n 1 130 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene VC_A0077 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain N16961 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Vibrio cholerae O1 biovar El Tor' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 243277 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG19 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9KN88_VIBCH _struct_ref.pdbx_db_accession Q9KN88 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EMSYELAQHGRSTLPRELAVYALEGPFFFAAAETFERVMGSIQETPQILILRLKWVPFMDITGIQTLEEMIQSFHKRGIK VLISGANSRVSQKLVKAGIVKLVGEQNVYPVFEGALSAALTEIEAQP ; _struct_ref.pdbx_align_begin 425 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3MGL A 4 ? 130 ? Q9KN88 425 ? 551 ? 425 551 2 1 3MGL B 4 ? 130 ? Q9KN88 425 ? 551 ? 425 551 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3MGL SER A 1 ? UNP Q9KN88 ? ? 'expression tag' 422 1 1 3MGL ASN A 2 ? UNP Q9KN88 ? ? 'expression tag' 423 2 1 3MGL ALA A 3 ? UNP Q9KN88 ? ? 'expression tag' 424 3 2 3MGL SER B 1 ? UNP Q9KN88 ? ? 'expression tag' 422 4 2 3MGL ASN B 2 ? UNP Q9KN88 ? ? 'expression tag' 423 5 2 3MGL ALA B 3 ? UNP Q9KN88 ? ? 'expression tag' 424 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IOD non-polymer . 'IODIDE ION' ? 'I -1' 126.904 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3MGL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.31 _exptl_crystal.density_percent_sol 46.70 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '0.2M Potassium iodide, 20% PEG3350, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2010-02-08 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111) double crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97937 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97937 # _reflns.entry_id 3MGL _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.25 _reflns.number_obs 13508 _reflns.number_all 13528 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.096 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 63.7 _reflns.B_iso_Wilson_estimate 44.6 _reflns.pdbx_redundancy 13.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.25 _reflns_shell.d_res_low 2.29 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.503 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 12.2 _reflns_shell.pdbx_redundancy 14.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 656 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3MGL _refine.ls_number_reflns_obs 13300 _refine.ls_number_reflns_all 13300 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50 _refine.ls_d_res_high 2.25 _refine.ls_percent_reflns_obs 98.45 _refine.ls_R_factor_obs 0.19570 _refine.ls_R_factor_all 0.19570 _refine.ls_R_factor_R_work 0.19316 _refine.ls_R_factor_R_free 0.24745 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 642 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.958 _refine.correlation_coeff_Fo_to_Fc_free 0.934 _refine.B_iso_mean 28.258 _refine.aniso_B[1][1] 0.14 _refine.aniso_B[2][2] 0.14 _refine.aniso_B[3][3] -0.28 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.230 _refine.overall_SU_ML 0.149 _refine.overall_SU_B 12.864 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1975 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 11 _refine_hist.number_atoms_solvent 68 _refine_hist.number_atoms_total 2054 _refine_hist.d_res_high 2.25 _refine_hist.d_res_low 50 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.013 0.022 ? 2023 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.278 1.969 ? 2734 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.082 5.000 ? 254 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.620 23.882 ? 85 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.753 15.000 ? 362 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.413 15.000 ? 13 'X-RAY DIFFRACTION' ? r_chiral_restr 0.077 0.200 ? 315 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.021 ? 1495 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.782 1.500 ? 1266 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.437 2.000 ? 2036 'X-RAY DIFFRACTION' ? r_scbond_it 2.665 3.000 ? 757 'X-RAY DIFFRACTION' ? r_scangle_it 4.348 4.500 ? 698 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 1.268 3.000 ? 2023 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.249 _refine_ls_shell.d_res_low 2.308 _refine_ls_shell.number_reflns_R_work 868 _refine_ls_shell.R_factor_R_work 0.148 _refine_ls_shell.percent_reflns_obs 95.23 _refine_ls_shell.R_factor_R_free 0.222 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 50 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 918 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3MGL _struct.title 'Crystal structure of permease family protein from Vibrio cholerae' _struct.pdbx_descriptor 'Sulfate permease family protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3MGL _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.text ;PSI2, MCSG, structural genomics, sulfate permease family protein, Protein Structure Initiative, Midwest Center for Structural Genomics, TRANSPORT PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 2 ? K N N 2 ? L N N 2 ? M N N 2 ? N N N 3 ? O N N 3 ? # _struct_biol.id 1 _struct_biol.details 'octamer with operator (x,y,z), (y-1/2,-x+3/2,z), (-y+3/2,x+1/2,z), (-x+1,-y+2,z)' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 2 ? HIS A 12 ? ASN A 423 HIS A 433 1 ? 11 HELX_P HELX_P2 2 PHE A 31 ? ILE A 45 ? PHE A 452 ILE A 466 1 ? 15 HELX_P HELX_P3 3 ASP A 63 ? ARG A 80 ? ASP A 484 ARG A 501 1 ? 18 HELX_P HELX_P4 4 ASN A 90 ? ALA A 100 ? ASN A 511 ALA A 521 1 ? 11 HELX_P HELX_P5 5 GLY A 101 ? GLY A 107 ? GLY A 522 GLY A 528 1 ? 7 HELX_P HELX_P6 6 VAL A 114 ? GLN A 129 ? VAL A 535 GLN A 550 1 ? 16 HELX_P HELX_P7 7 GLU B 4 ? HIS B 12 ? GLU B 425 HIS B 433 1 ? 9 HELX_P HELX_P8 8 PHE B 31 ? ILE B 45 ? PHE B 452 ILE B 466 1 ? 15 HELX_P HELX_P9 9 ASP B 63 ? ARG B 80 ? ASP B 484 ARG B 501 1 ? 18 HELX_P HELX_P10 10 ASN B 90 ? ALA B 100 ? ASN B 511 ALA B 521 1 ? 11 HELX_P HELX_P11 11 GLY B 101 ? GLY B 107 ? GLY B 522 GLY B 528 1 ? 7 HELX_P HELX_P12 12 VAL B 114 ? ALA B 128 ? VAL B 535 ALA B 549 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A GLU 4 C ? ? ? 1_555 A MSE 5 N ? ? A GLU 425 A MSE 426 1_555 ? ? ? ? ? ? ? 1.333 ? covale2 covale ? ? A MSE 5 C ? ? ? 1_555 A SER 6 N ? ? A MSE 426 A SER 427 1_555 ? ? ? ? ? ? ? 1.324 ? covale3 covale ? ? A VAL 41 C ? ? ? 1_555 A MSE 42 N ? ? A VAL 462 A MSE 463 1_555 ? ? ? ? ? ? ? 1.326 ? covale4 covale ? ? A MSE 42 C ? ? ? 1_555 A GLY 43 N ? ? A MSE 463 A GLY 464 1_555 ? ? ? ? ? ? ? 1.332 ? covale5 covale ? ? A PHE 61 C ? ? ? 1_555 A MSE 62 N ? ? A PHE 482 A MSE 483 1_555 ? ? ? ? ? ? ? 1.332 ? covale6 covale ? ? A MSE 62 C ? ? ? 1_555 A ASP 63 N ? ? A MSE 483 A ASP 484 1_555 ? ? ? ? ? ? ? 1.317 ? covale7 covale ? ? A GLU 72 C ? ? ? 1_555 A MSE 73 N ? ? A GLU 493 A MSE 494 1_555 ? ? ? ? ? ? ? 1.327 ? covale8 covale ? ? A MSE 73 C ? ? ? 1_555 A ILE 74 N ? ? A MSE 494 A ILE 495 1_555 ? ? ? ? ? ? ? 1.331 ? covale9 covale ? ? B GLU 4 C ? ? ? 1_555 B MSE 5 N ? ? B GLU 425 B MSE 426 1_555 ? ? ? ? ? ? ? 1.322 ? covale10 covale ? ? B VAL 41 C ? ? ? 1_555 B MSE 42 N ? ? B VAL 462 B MSE 463 1_555 ? ? ? ? ? ? ? 1.327 ? covale11 covale ? ? B MSE 42 C ? ? ? 1_555 B GLY 43 N ? ? B MSE 463 B GLY 464 1_555 ? ? ? ? ? ? ? 1.331 ? covale12 covale ? ? B PHE 61 C ? ? ? 1_555 B MSE 62 N ? ? B PHE 482 B MSE 483 1_555 ? ? ? ? ? ? ? 1.328 ? covale13 covale ? ? B MSE 62 C ? ? ? 1_555 B ASP 63 N ? ? B MSE 483 B ASP 484 1_555 ? ? ? ? ? ? ? 1.323 ? covale14 covale ? ? B GLU 72 C ? ? ? 1_555 B MSE 73 N ? ? B GLU 493 B MSE 494 1_555 ? ? ? ? ? ? ? 1.330 ? covale15 covale ? ? B MSE 73 C ? ? ? 1_555 B ILE 74 N ? ? B MSE 494 B ILE 495 1_555 ? ? ? ? ? ? ? 1.328 ? covale16 covale ? ? B MSE 5 C ? ? ? 1_555 B SER 6 N ? ? B MSE 426 B SER 427 1_555 ? ? ? ? ? ? ? 1.339 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 21 ? GLU A 27 ? LEU A 442 GLU A 448 A 2 ILE A 51 ? TRP A 58 ? ILE A 472 TRP A 479 A 3 LYS A 83 ? SER A 87 ? LYS A 504 SER A 508 A 4 VAL A 111 ? TYR A 112 ? VAL A 532 TYR A 533 B 1 LEU B 21 ? ALA B 25 ? LEU B 442 ALA B 446 B 2 ILE B 51 ? ARG B 55 ? ILE B 472 ARG B 476 B 3 LYS B 83 ? SER B 87 ? LYS B 504 SER B 508 B 4 VAL B 111 ? TYR B 112 ? VAL B 532 TYR B 533 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 24 ? N TYR A 445 O ILE A 53 ? O ILE A 474 A 2 3 N LEU A 54 ? N LEU A 475 O LEU A 85 ? O LEU A 506 A 3 4 N ILE A 86 ? N ILE A 507 O TYR A 112 ? O TYR A 533 B 1 2 N TYR B 24 ? N TYR B 445 O ARG B 55 ? O ARG B 476 B 2 3 N LEU B 52 ? N LEU B 473 O LEU B 85 ? O LEU B 506 B 3 4 N ILE B 86 ? N ILE B 507 O TYR B 112 ? O TYR B 533 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE IOD A 602' AC2 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE IOD A 603' AC3 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE IOD A 604' AC4 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE IOD A 605' AC5 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE IOD A 607' AC6 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE IOD A 552' AC7 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE IOD B 601' AC8 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE IOD B 602' AC9 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE IOD B 604' BC1 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE IOD B 606' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 HOH N . ? HOH A 11 . ? 1_555 ? 2 AC1 4 ARG A 55 ? ARG A 476 . ? 1_555 ? 3 AC1 4 LYS A 57 ? LYS A 478 . ? 1_555 ? 4 AC1 4 SER A 87 ? SER A 508 . ? 1_555 ? 5 AC2 2 MSE A 62 ? MSE A 483 . ? 3_655 ? 6 AC2 2 LYS A 96 ? LYS A 517 . ? 3_655 ? 7 AC3 1 PRO A 113 ? PRO A 534 . ? 1_555 ? 8 AC4 1 PHE A 30 ? PHE A 451 . ? 3_655 ? 9 AC5 2 HOH N . ? HOH A 68 . ? 3_655 ? 10 AC5 2 LYS A 96 ? LYS A 517 . ? 3_655 ? 11 AC6 2 LYS A 104 ? LYS A 525 . ? 1_555 ? 12 AC6 2 GLN B 95 ? GLN B 516 . ? 6_466 ? 13 AC7 3 MSE B 62 ? MSE B 483 . ? 1_555 ? 14 AC7 3 ARG B 92 ? ARG B 513 . ? 1_555 ? 15 AC7 3 LYS B 96 ? LYS B 517 . ? 1_555 ? 16 AC8 2 PRO B 113 ? PRO B 534 . ? 1_555 ? 17 AC8 2 GLY B 117 ? GLY B 538 . ? 1_555 ? 18 AC9 5 HOH O . ? HOH B 59 . ? 1_555 ? 19 AC9 5 ARG B 55 ? ARG B 476 . ? 1_555 ? 20 AC9 5 LYS B 57 ? LYS B 478 . ? 1_555 ? 21 AC9 5 SER B 87 ? SER B 508 . ? 1_555 ? 22 AC9 5 GLY B 88 ? GLY B 509 . ? 1_555 ? 23 BC1 1 PHE B 30 ? PHE B 451 . ? 4_465 ? # _database_PDB_matrix.entry_id 3MGL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3MGL _atom_sites.fract_transf_matrix[1][1] 0.010999 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010999 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015335 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C I N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 422 ? ? ? A . n A 1 2 ASN 2 423 423 ASN ALA A . n A 1 3 ALA 3 424 424 ALA ALA A . n A 1 4 GLU 4 425 425 GLU GLU A . n A 1 5 MSE 5 426 426 MSE MSE A . n A 1 6 SER 6 427 427 SER SER A . n A 1 7 TYR 7 428 428 TYR TYR A . n A 1 8 GLU 8 429 429 GLU GLU A . n A 1 9 LEU 9 430 430 LEU LEU A . n A 1 10 ALA 10 431 431 ALA ALA A . n A 1 11 GLN 11 432 432 GLN GLN A . n A 1 12 HIS 12 433 433 HIS HIS A . n A 1 13 GLY 13 434 434 GLY GLY A . n A 1 14 ARG 14 435 435 ARG ARG A . n A 1 15 SER 15 436 436 SER SER A . n A 1 16 THR 16 437 437 THR THR A . n A 1 17 LEU 17 438 438 LEU LEU A . n A 1 18 PRO 18 439 439 PRO PRO A . n A 1 19 ARG 19 440 440 ARG ARG A . n A 1 20 GLU 20 441 441 GLU GLU A . n A 1 21 LEU 21 442 442 LEU LEU A . n A 1 22 ALA 22 443 443 ALA ALA A . n A 1 23 VAL 23 444 444 VAL VAL A . n A 1 24 TYR 24 445 445 TYR TYR A . n A 1 25 ALA 25 446 446 ALA ALA A . n A 1 26 LEU 26 447 447 LEU LEU A . n A 1 27 GLU 27 448 448 GLU GLU A . n A 1 28 GLY 28 449 449 GLY GLY A . n A 1 29 PRO 29 450 450 PRO PRO A . n A 1 30 PHE 30 451 451 PHE PHE A . n A 1 31 PHE 31 452 452 PHE PHE A . n A 1 32 PHE 32 453 453 PHE PHE A . n A 1 33 ALA 33 454 454 ALA ALA A . n A 1 34 ALA 34 455 455 ALA ALA A . n A 1 35 ALA 35 456 456 ALA ALA A . n A 1 36 GLU 36 457 457 GLU GLU A . n A 1 37 THR 37 458 458 THR THR A . n A 1 38 PHE 38 459 459 PHE PHE A . n A 1 39 GLU 39 460 460 GLU GLU A . n A 1 40 ARG 40 461 461 ARG ARG A . n A 1 41 VAL 41 462 462 VAL VAL A . n A 1 42 MSE 42 463 463 MSE MSE A . n A 1 43 GLY 43 464 464 GLY GLY A . n A 1 44 SER 44 465 465 SER SER A . n A 1 45 ILE 45 466 466 ILE ILE A . n A 1 46 GLN 46 467 467 GLN GLN A . n A 1 47 GLU 47 468 468 GLU GLU A . n A 1 48 THR 48 469 469 THR THR A . n A 1 49 PRO 49 470 470 PRO PRO A . n A 1 50 GLN 50 471 471 GLN GLN A . n A 1 51 ILE 51 472 472 ILE ILE A . n A 1 52 LEU 52 473 473 LEU LEU A . n A 1 53 ILE 53 474 474 ILE ILE A . n A 1 54 LEU 54 475 475 LEU LEU A . n A 1 55 ARG 55 476 476 ARG ARG A . n A 1 56 LEU 56 477 477 LEU LEU A . n A 1 57 LYS 57 478 478 LYS LYS A . n A 1 58 TRP 58 479 479 TRP TRP A . n A 1 59 VAL 59 480 480 VAL VAL A . n A 1 60 PRO 60 481 481 PRO PRO A . n A 1 61 PHE 61 482 482 PHE PHE A . n A 1 62 MSE 62 483 483 MSE MSE A . n A 1 63 ASP 63 484 484 ASP ASP A . n A 1 64 ILE 64 485 485 ILE ILE A . n A 1 65 THR 65 486 486 THR THR A . n A 1 66 GLY 66 487 487 GLY GLY A . n A 1 67 ILE 67 488 488 ILE ILE A . n A 1 68 GLN 68 489 489 GLN GLN A . n A 1 69 THR 69 490 490 THR THR A . n A 1 70 LEU 70 491 491 LEU LEU A . n A 1 71 GLU 71 492 492 GLU GLU A . n A 1 72 GLU 72 493 493 GLU GLU A . n A 1 73 MSE 73 494 494 MSE MSE A . n A 1 74 ILE 74 495 495 ILE ILE A . n A 1 75 GLN 75 496 496 GLN GLN A . n A 1 76 SER 76 497 497 SER SER A . n A 1 77 PHE 77 498 498 PHE PHE A . n A 1 78 HIS 78 499 499 HIS HIS A . n A 1 79 LYS 79 500 500 LYS LYS A . n A 1 80 ARG 80 501 501 ARG ARG A . n A 1 81 GLY 81 502 502 GLY GLY A . n A 1 82 ILE 82 503 503 ILE ILE A . n A 1 83 LYS 83 504 504 LYS LYS A . n A 1 84 VAL 84 505 505 VAL VAL A . n A 1 85 LEU 85 506 506 LEU LEU A . n A 1 86 ILE 86 507 507 ILE ILE A . n A 1 87 SER 87 508 508 SER SER A . n A 1 88 GLY 88 509 509 GLY GLY A . n A 1 89 ALA 89 510 510 ALA ALA A . n A 1 90 ASN 90 511 511 ASN ASN A . n A 1 91 SER 91 512 512 SER SER A . n A 1 92 ARG 92 513 513 ARG ARG A . n A 1 93 VAL 93 514 514 VAL VAL A . n A 1 94 SER 94 515 515 SER SER A . n A 1 95 GLN 95 516 516 GLN GLN A . n A 1 96 LYS 96 517 517 LYS LYS A . n A 1 97 LEU 97 518 518 LEU LEU A . n A 1 98 VAL 98 519 519 VAL VAL A . n A 1 99 LYS 99 520 520 LYS LYS A . n A 1 100 ALA 100 521 521 ALA ALA A . n A 1 101 GLY 101 522 522 GLY GLY A . n A 1 102 ILE 102 523 523 ILE ILE A . n A 1 103 VAL 103 524 524 VAL VAL A . n A 1 104 LYS 104 525 525 LYS LYS A . n A 1 105 LEU 105 526 526 LEU LEU A . n A 1 106 VAL 106 527 527 VAL VAL A . n A 1 107 GLY 107 528 528 GLY GLY A . n A 1 108 GLU 108 529 529 GLU GLU A . n A 1 109 GLN 109 530 530 GLN GLN A . n A 1 110 ASN 110 531 531 ASN ASN A . n A 1 111 VAL 111 532 532 VAL VAL A . n A 1 112 TYR 112 533 533 TYR TYR A . n A 1 113 PRO 113 534 534 PRO PRO A . n A 1 114 VAL 114 535 535 VAL VAL A . n A 1 115 PHE 115 536 536 PHE PHE A . n A 1 116 GLU 116 537 537 GLU GLU A . n A 1 117 GLY 117 538 538 GLY GLY A . n A 1 118 ALA 118 539 539 ALA ALA A . n A 1 119 LEU 119 540 540 LEU LEU A . n A 1 120 SER 120 541 541 SER SER A . n A 1 121 ALA 121 542 542 ALA ALA A . n A 1 122 ALA 122 543 543 ALA ALA A . n A 1 123 LEU 123 544 544 LEU LEU A . n A 1 124 THR 124 545 545 THR THR A . n A 1 125 GLU 125 546 546 GLU GLU A . n A 1 126 ILE 126 547 547 ILE ILE A . n A 1 127 GLU 127 548 548 GLU GLU A . n A 1 128 ALA 128 549 549 ALA ALA A . n A 1 129 GLN 129 550 550 GLN ALA A . n A 1 130 PRO 130 551 ? ? ? A . n B 1 1 SER 1 422 ? ? ? B . n B 1 2 ASN 2 423 ? ? ? B . n B 1 3 ALA 3 424 ? ? ? B . n B 1 4 GLU 4 425 425 GLU GLU B . n B 1 5 MSE 5 426 426 MSE MSE B . n B 1 6 SER 6 427 427 SER ALA B . n B 1 7 TYR 7 428 428 TYR TYR B . n B 1 8 GLU 8 429 429 GLU GLU B . n B 1 9 LEU 9 430 430 LEU LEU B . n B 1 10 ALA 10 431 431 ALA ALA B . n B 1 11 GLN 11 432 432 GLN GLN B . n B 1 12 HIS 12 433 433 HIS HIS B . n B 1 13 GLY 13 434 434 GLY GLY B . n B 1 14 ARG 14 435 435 ARG ARG B . n B 1 15 SER 15 436 436 SER SER B . n B 1 16 THR 16 437 437 THR THR B . n B 1 17 LEU 17 438 438 LEU LEU B . n B 1 18 PRO 18 439 439 PRO PRO B . n B 1 19 ARG 19 440 440 ARG ARG B . n B 1 20 GLU 20 441 441 GLU GLU B . n B 1 21 LEU 21 442 442 LEU LEU B . n B 1 22 ALA 22 443 443 ALA ALA B . n B 1 23 VAL 23 444 444 VAL VAL B . n B 1 24 TYR 24 445 445 TYR TYR B . n B 1 25 ALA 25 446 446 ALA ALA B . n B 1 26 LEU 26 447 447 LEU LEU B . n B 1 27 GLU 27 448 448 GLU ALA B . n B 1 28 GLY 28 449 449 GLY GLY B . n B 1 29 PRO 29 450 450 PRO PRO B . n B 1 30 PHE 30 451 451 PHE PHE B . n B 1 31 PHE 31 452 452 PHE PHE B . n B 1 32 PHE 32 453 453 PHE PHE B . n B 1 33 ALA 33 454 454 ALA ALA B . n B 1 34 ALA 34 455 455 ALA ALA B . n B 1 35 ALA 35 456 456 ALA ALA B . n B 1 36 GLU 36 457 457 GLU GLU B . n B 1 37 THR 37 458 458 THR THR B . n B 1 38 PHE 38 459 459 PHE PHE B . n B 1 39 GLU 39 460 460 GLU GLU B . n B 1 40 ARG 40 461 461 ARG ARG B . n B 1 41 VAL 41 462 462 VAL VAL B . n B 1 42 MSE 42 463 463 MSE MSE B . n B 1 43 GLY 43 464 464 GLY GLY B . n B 1 44 SER 44 465 465 SER SER B . n B 1 45 ILE 45 466 466 ILE ILE B . n B 1 46 GLN 46 467 467 GLN GLN B . n B 1 47 GLU 47 468 468 GLU GLU B . n B 1 48 THR 48 469 469 THR THR B . n B 1 49 PRO 49 470 470 PRO PRO B . n B 1 50 GLN 50 471 471 GLN GLN B . n B 1 51 ILE 51 472 472 ILE ILE B . n B 1 52 LEU 52 473 473 LEU LEU B . n B 1 53 ILE 53 474 474 ILE ILE B . n B 1 54 LEU 54 475 475 LEU LEU B . n B 1 55 ARG 55 476 476 ARG ARG B . n B 1 56 LEU 56 477 477 LEU LEU B . n B 1 57 LYS 57 478 478 LYS LYS B . n B 1 58 TRP 58 479 479 TRP TRP B . n B 1 59 VAL 59 480 480 VAL VAL B . n B 1 60 PRO 60 481 481 PRO PRO B . n B 1 61 PHE 61 482 482 PHE PHE B . n B 1 62 MSE 62 483 483 MSE MSE B . n B 1 63 ASP 63 484 484 ASP ASP B . n B 1 64 ILE 64 485 485 ILE ILE B . n B 1 65 THR 65 486 486 THR THR B . n B 1 66 GLY 66 487 487 GLY GLY B . n B 1 67 ILE 67 488 488 ILE ILE B . n B 1 68 GLN 68 489 489 GLN GLN B . n B 1 69 THR 69 490 490 THR THR B . n B 1 70 LEU 70 491 491 LEU LEU B . n B 1 71 GLU 71 492 492 GLU GLU B . n B 1 72 GLU 72 493 493 GLU GLU B . n B 1 73 MSE 73 494 494 MSE MSE B . n B 1 74 ILE 74 495 495 ILE ILE B . n B 1 75 GLN 75 496 496 GLN GLN B . n B 1 76 SER 76 497 497 SER SER B . n B 1 77 PHE 77 498 498 PHE PHE B . n B 1 78 HIS 78 499 499 HIS HIS B . n B 1 79 LYS 79 500 500 LYS LYS B . n B 1 80 ARG 80 501 501 ARG ARG B . n B 1 81 GLY 81 502 502 GLY GLY B . n B 1 82 ILE 82 503 503 ILE ILE B . n B 1 83 LYS 83 504 504 LYS LYS B . n B 1 84 VAL 84 505 505 VAL VAL B . n B 1 85 LEU 85 506 506 LEU LEU B . n B 1 86 ILE 86 507 507 ILE ILE B . n B 1 87 SER 87 508 508 SER SER B . n B 1 88 GLY 88 509 509 GLY GLY B . n B 1 89 ALA 89 510 510 ALA ALA B . n B 1 90 ASN 90 511 511 ASN ASN B . n B 1 91 SER 91 512 512 SER SER B . n B 1 92 ARG 92 513 513 ARG ARG B . n B 1 93 VAL 93 514 514 VAL VAL B . n B 1 94 SER 94 515 515 SER SER B . n B 1 95 GLN 95 516 516 GLN GLN B . n B 1 96 LYS 96 517 517 LYS LYS B . n B 1 97 LEU 97 518 518 LEU LEU B . n B 1 98 VAL 98 519 519 VAL VAL B . n B 1 99 LYS 99 520 520 LYS LYS B . n B 1 100 ALA 100 521 521 ALA ALA B . n B 1 101 GLY 101 522 522 GLY GLY B . n B 1 102 ILE 102 523 523 ILE ILE B . n B 1 103 VAL 103 524 524 VAL VAL B . n B 1 104 LYS 104 525 525 LYS LYS B . n B 1 105 LEU 105 526 526 LEU LEU B . n B 1 106 VAL 106 527 527 VAL VAL B . n B 1 107 GLY 107 528 528 GLY GLY B . n B 1 108 GLU 108 529 529 GLU GLU B . n B 1 109 GLN 109 530 530 GLN GLN B . n B 1 110 ASN 110 531 531 ASN ASN B . n B 1 111 VAL 111 532 532 VAL VAL B . n B 1 112 TYR 112 533 533 TYR TYR B . n B 1 113 PRO 113 534 534 PRO PRO B . n B 1 114 VAL 114 535 535 VAL VAL B . n B 1 115 PHE 115 536 536 PHE PHE B . n B 1 116 GLU 116 537 537 GLU GLU B . n B 1 117 GLY 117 538 538 GLY GLY B . n B 1 118 ALA 118 539 539 ALA ALA B . n B 1 119 LEU 119 540 540 LEU LEU B . n B 1 120 SER 120 541 541 SER SER B . n B 1 121 ALA 121 542 542 ALA ALA B . n B 1 122 ALA 122 543 543 ALA ALA B . n B 1 123 LEU 123 544 544 LEU LEU B . n B 1 124 THR 124 545 545 THR THR B . n B 1 125 GLU 125 546 546 GLU GLU B . n B 1 126 ILE 126 547 547 ILE ILE B . n B 1 127 GLU 127 548 548 GLU GLU B . n B 1 128 ALA 128 549 549 ALA ALA B . n B 1 129 GLN 129 550 550 GLN GLN B . n B 1 130 PRO 130 551 ? ? ? B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 IOD 1 602 602 IOD IOD A . D 2 IOD 1 603 603 IOD IOD A . E 2 IOD 1 604 604 IOD IOD A . F 2 IOD 1 605 605 IOD IOD A . G 2 IOD 1 607 607 IOD IOD A . H 2 IOD 1 552 605 IOD IOD A . I 2 IOD 1 601 601 IOD IOD B . J 2 IOD 1 602 602 IOD IOD B . K 2 IOD 1 603 603 IOD IOD B . L 2 IOD 1 604 604 IOD IOD B . M 2 IOD 1 606 606 IOD IOD B . N 3 HOH 1 1 1 HOH HOH A . N 3 HOH 2 2 2 HOH HOH A . N 3 HOH 3 3 3 HOH HOH A . N 3 HOH 4 4 4 HOH HOH A . N 3 HOH 5 5 5 HOH HOH A . N 3 HOH 6 6 6 HOH HOH A . N 3 HOH 7 7 7 HOH HOH A . N 3 HOH 8 8 8 HOH HOH A . N 3 HOH 9 9 9 HOH HOH A . N 3 HOH 10 10 10 HOH HOH A . N 3 HOH 11 11 11 HOH HOH A . N 3 HOH 12 12 12 HOH HOH A . N 3 HOH 13 13 13 HOH HOH A . N 3 HOH 14 14 14 HOH HOH A . N 3 HOH 15 15 15 HOH HOH A . N 3 HOH 16 16 16 HOH HOH A . N 3 HOH 17 17 17 HOH HOH A . N 3 HOH 18 18 18 HOH HOH A . N 3 HOH 19 19 19 HOH HOH A . N 3 HOH 20 20 20 HOH HOH A . N 3 HOH 21 21 21 HOH HOH A . N 3 HOH 22 22 22 HOH HOH A . N 3 HOH 23 23 23 HOH HOH A . N 3 HOH 24 24 24 HOH HOH A . N 3 HOH 25 25 25 HOH HOH A . N 3 HOH 26 26 26 HOH HOH A . N 3 HOH 27 27 27 HOH HOH A . N 3 HOH 28 28 28 HOH HOH A . N 3 HOH 29 29 29 HOH HOH A . N 3 HOH 30 30 30 HOH HOH A . N 3 HOH 31 31 31 HOH HOH A . N 3 HOH 32 32 32 HOH HOH A . N 3 HOH 33 33 33 HOH HOH A . N 3 HOH 34 34 34 HOH HOH A . N 3 HOH 35 35 35 HOH HOH A . N 3 HOH 36 36 36 HOH HOH A . N 3 HOH 37 37 37 HOH HOH A . N 3 HOH 38 38 38 HOH HOH A . N 3 HOH 39 39 39 HOH HOH A . N 3 HOH 40 40 40 HOH HOH A . N 3 HOH 41 41 41 HOH HOH A . N 3 HOH 42 42 42 HOH HOH A . N 3 HOH 43 43 43 HOH HOH A . N 3 HOH 44 44 44 HOH HOH A . N 3 HOH 45 45 45 HOH HOH A . N 3 HOH 46 46 46 HOH HOH A . N 3 HOH 47 54 54 HOH HOH A . N 3 HOH 48 67 67 HOH HOH A . N 3 HOH 49 68 68 HOH HOH A . O 3 HOH 1 47 47 HOH HOH B . O 3 HOH 2 48 48 HOH HOH B . O 3 HOH 3 49 49 HOH HOH B . O 3 HOH 4 50 50 HOH HOH B . O 3 HOH 5 51 51 HOH HOH B . O 3 HOH 6 52 52 HOH HOH B . O 3 HOH 7 53 53 HOH HOH B . O 3 HOH 8 55 55 HOH HOH B . O 3 HOH 9 56 56 HOH HOH B . O 3 HOH 10 57 57 HOH HOH B . O 3 HOH 11 58 58 HOH HOH B . O 3 HOH 12 59 59 HOH HOH B . O 3 HOH 13 60 60 HOH HOH B . O 3 HOH 14 61 61 HOH HOH B . O 3 HOH 15 62 62 HOH HOH B . O 3 HOH 16 63 63 HOH HOH B . O 3 HOH 17 64 64 HOH HOH B . O 3 HOH 18 65 65 HOH HOH B . O 3 HOH 19 66 66 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 5 A MSE 426 ? MET SELENOMETHIONINE 2 A MSE 42 A MSE 463 ? MET SELENOMETHIONINE 3 A MSE 62 A MSE 483 ? MET SELENOMETHIONINE 4 A MSE 73 A MSE 494 ? MET SELENOMETHIONINE 5 B MSE 5 B MSE 426 ? MET SELENOMETHIONINE 6 B MSE 42 B MSE 463 ? MET SELENOMETHIONINE 7 B MSE 62 B MSE 483 ? MET SELENOMETHIONINE 8 B MSE 73 B MSE 494 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 23990 ? 1 MORE -119 ? 1 'SSA (A^2)' 38690 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_675 -x+1,-y+2,z -1.0000000000 0.0000000000 0.0000000000 90.9140000000 0.0000000000 -1.0000000000 0.0000000000 181.8280000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_655 -y+3/2,x+1/2,z 0.0000000000 -1.0000000000 0.0000000000 136.3710000000 1.0000000000 0.0000000000 0.0000000000 45.4570000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 4_465 y-1/2,-x+3/2,z 0.0000000000 1.0000000000 0.0000000000 -45.4570000000 -1.0000000000 0.0000000000 0.0000000000 136.3710000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-04-21 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 52.7685 64.4621 28.5450 0.1458 0.0817 0.1236 0.0290 -0.0386 0.0187 8.1889 4.1071 14.4178 1.7726 -1.0699 -5.7499 0.2962 -0.3038 -0.1219 0.3997 -0.2542 -0.2872 -0.6164 0.0970 -0.0420 'X-RAY DIFFRACTION' 2 ? refined 37.4654 73.8386 17.1450 0.0622 0.0507 0.0468 -0.0188 -0.0103 0.0009 2.9781 3.4240 1.8111 -0.3515 -0.0111 0.8289 -0.0851 0.0728 0.1401 -0.2024 0.0552 0.1287 -0.0152 -0.0864 0.0299 'X-RAY DIFFRACTION' 3 ? refined 45.3467 61.1023 24.4344 0.1261 0.1312 0.1187 -0.0092 -0.0050 0.0324 15.9196 16.7917 12.3032 -7.9156 -4.8583 6.8991 -0.1672 -0.0685 -0.4445 0.5019 0.2777 -0.6389 0.9299 -0.0995 -0.1105 'X-RAY DIFFRACTION' 4 ? refined 37.5214 64.1290 42.3529 0.1603 0.0658 0.0895 -0.0528 0.0306 -0.0002 6.0414 5.9532 19.7279 -2.2344 -0.5941 4.0135 0.0834 0.0113 -0.1370 -0.1879 -0.1703 0.1571 0.0953 0.0622 0.0869 'X-RAY DIFFRACTION' 5 ? refined 53.2726 73.8472 53.2484 0.0790 0.0467 0.0322 0.0225 0.0027 0.0054 4.8771 3.4495 2.7679 1.3359 -0.4601 -0.9759 -0.0907 -0.0811 0.0629 0.1937 0.0525 -0.1059 -0.0543 0.0503 0.0382 'X-RAY DIFFRACTION' 6 ? refined 44.7886 61.0446 46.2037 0.2410 0.1828 0.1720 -0.0078 0.0376 -0.0327 17.6424 11.8326 12.2228 7.2799 -6.5400 -3.0919 -0.4214 0.1321 -0.7096 0.2031 0.3738 0.3084 0.7656 -0.2436 0.0477 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 423 ? ? A 440 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 441 ? ? A 534 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 535 ? ? A 550 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 B 423 ? ? B 440 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 B 441 ? ? B 534 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 B 535 ? ? B 550 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SBC-Collect 'data collection' . ? 1 HKL-3000 phasing . ? 2 SHELXD phasing . ? 3 SHELXE 'model building' . ? 4 MLPHARE phasing . ? 5 DM 'model building' . ? 6 RESOLVE 'model building' . ? 7 Coot 'model building' . ? 8 ARP/wARP 'model building' . ? 9 REFMAC refinement 5.5.0102 ? 10 HKL-3000 'data reduction' . ? 11 HKL-3000 'data scaling' . ? 12 DM phasing . ? 13 RESOLVE phasing . ? 14 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 I _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 IOD _pdbx_validate_symm_contact.auth_seq_id_1 607 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 68 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 3_655 _pdbx_validate_symm_contact.dist 1.29 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 451 ? ? -110.95 64.22 2 1 GLU B 448 ? ? -52.26 -70.74 3 1 PHE B 451 ? ? -113.05 65.71 4 1 ASN B 511 ? ? -64.89 -179.11 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASN 423 ? CG ? A ASN 2 CG 2 1 Y 1 A ASN 423 ? OD1 ? A ASN 2 OD1 3 1 Y 1 A ASN 423 ? ND2 ? A ASN 2 ND2 4 1 Y 1 A GLN 550 ? CG ? A GLN 129 CG 5 1 Y 1 A GLN 550 ? CD ? A GLN 129 CD 6 1 Y 1 A GLN 550 ? OE1 ? A GLN 129 OE1 7 1 Y 1 A GLN 550 ? NE2 ? A GLN 129 NE2 8 1 Y 1 B SER 427 ? OG ? B SER 6 OG 9 1 Y 1 B GLU 448 ? CG ? B GLU 27 CG 10 1 Y 1 B GLU 448 ? CD ? B GLU 27 CD 11 1 Y 1 B GLU 448 ? OE1 ? B GLU 27 OE1 12 1 Y 1 B GLU 448 ? OE2 ? B GLU 27 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 422 ? A SER 1 2 1 Y 1 A PRO 551 ? A PRO 130 3 1 Y 1 B SER 422 ? B SER 1 4 1 Y 1 B ASN 423 ? B ASN 2 5 1 Y 1 B ALA 424 ? B ALA 3 6 1 Y 1 B PRO 551 ? B PRO 130 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'IODIDE ION' IOD 3 water HOH #