HEADER OXIDOREDUCTASE 16-APR-10 3ML1 TITLE CRYSTAL STRUCTURE OF THE PERIPLASMIC NITRATE REDUCTASE FROM TITLE 2 CUPRIAVIDUS NECATOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: PERIPLASMIC NITRATE REDUCTASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: NAPA; COMPND 5 EC: 1.7.99.4; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: CATALYTIC SUBUNIT; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DIHEME CYTOCHROME C NAPB; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: NAPB; COMPND 12 EC: 1.9.6.1; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RALSTONIA EUTROPHA; SOURCE 3 ORGANISM_COMMON: CUPRIAVIDUS NECATOR; SOURCE 4 ORGANISM_TAXID: 381666; SOURCE 5 STRAIN: H16; SOURCE 6 GENE: NAPAB; SOURCE 7 EXPRESSION_SYSTEM: CUPRIAVIDUS NECATOR; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 106590; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: HF210; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PCM62; SOURCE 12 MOL_ID: 2; SOURCE 13 ORGANISM_SCIENTIFIC: RALSTONIA EUTROPHA; SOURCE 14 ORGANISM_COMMON: CUPRIAVIDUS NECATOR; SOURCE 15 ORGANISM_TAXID: 381666; SOURCE 16 STRAIN: H16; SOURCE 17 GENE: NAPB; SOURCE 18 EXPRESSION_SYSTEM: CUPRIAVIDUS NECATOR; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 106590; SOURCE 20 EXPRESSION_SYSTEM_STRAIN: HF210; SOURCE 21 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 22 EXPRESSION_SYSTEM_PLASMID: PCM62 KEYWDS HETERODIMER, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR C.COELHO,J.TRINCAO,M.J.ROMAO REVDAT 4 09-OCT-24 3ML1 1 REMARK REVDAT 3 01-NOV-23 3ML1 1 REMARK LINK REVDAT 2 07-DEC-11 3ML1 1 JRNL VERSN REVDAT 1 06-APR-11 3ML1 0 JRNL AUTH C.COELHO,P.J.GONZALEZ,J.J.G.MOURA,I.MOURA,J.TRINCAO, JRNL AUTH 2 M.J.ROMAO JRNL TITL THE CRYSTAL STRUCTURE OF CUPRIAVIDUS NECATOR NITRATE JRNL TITL 2 REDUCTASE IN OXIDIZED AND PARTIALLY REDUCED STATES JRNL REF J.MOL.BIOL. V. 408 932 2011 JRNL REFN ISSN 0022-2836 JRNL PMID 21419779 JRNL DOI 10.1016/J.JMB.2011.03.016 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.48 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 140809 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.190 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 7066 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 9796 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.18 REMARK 3 BIN R VALUE (WORKING SET) : 0.2540 REMARK 3 BIN FREE R VALUE SET COUNT : 494 REMARK 3 BIN FREE R VALUE : 0.2830 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7208 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 190 REMARK 3 SOLVENT ATOMS : 672 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.87 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.02000 REMARK 3 B22 (A**2) : -0.08000 REMARK 3 B33 (A**2) : 0.06000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.01000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.073 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.077 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.051 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.847 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7697 ; 0.028 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10554 ; 2.266 ; 2.005 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 926 ; 6.886 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 355 ;35.523 ;23.465 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1233 ;13.991 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 55 ;17.011 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1089 ; 0.207 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5958 ; 0.015 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4565 ; 1.137 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7371 ; 1.778 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3132 ; 2.950 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3110 ; 4.351 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 68 REMARK 3 RESIDUE RANGE : A 502 A 530 REMARK 3 RESIDUE RANGE : A 600 A 640 REMARK 3 ORIGIN FOR THE GROUP (A): 58.5370 -4.7160 27.4520 REMARK 3 T TENSOR REMARK 3 T11: 0.0414 T22: 0.0748 REMARK 3 T33: 0.0688 T12: -0.0026 REMARK 3 T13: 0.0011 T23: 0.0220 REMARK 3 L TENSOR REMARK 3 L11: 0.7760 L22: 0.7807 REMARK 3 L33: 0.9891 L12: -0.1258 REMARK 3 L13: -0.0368 L23: 0.0695 REMARK 3 S TENSOR REMARK 3 S11: 0.0237 S12: 0.0145 S13: 0.0840 REMARK 3 S21: 0.0257 S22: -0.0398 S23: -0.0802 REMARK 3 S31: -0.0365 S32: 0.1439 S33: 0.0161 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 69 A 147 REMARK 3 RESIDUE RANGE : A 387 A 501 REMARK 3 RESIDUE RANGE : A 531 A 599 REMARK 3 ORIGIN FOR THE GROUP (A): 49.9340 -0.3080 6.4220 REMARK 3 T TENSOR REMARK 3 T11: 0.1027 T22: 0.1241 REMARK 3 T33: 0.0646 T12: 0.0256 REMARK 3 T13: 0.0166 T23: 0.0445 REMARK 3 L TENSOR REMARK 3 L11: 0.6601 L22: 0.6127 REMARK 3 L33: 0.8031 L12: 0.0011 REMARK 3 L13: 0.0459 L23: -0.0927 REMARK 3 S TENSOR REMARK 3 S11: 0.0155 S12: 0.1944 S13: 0.1076 REMARK 3 S21: -0.1103 S22: -0.0453 S23: -0.0669 REMARK 3 S31: -0.0873 S32: 0.0904 S33: 0.0298 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 148 A 386 REMARK 3 ORIGIN FOR THE GROUP (A): 28.7470 -2.4020 35.5920 REMARK 3 T TENSOR REMARK 3 T11: 0.0466 T22: 0.0621 REMARK 3 T33: 0.0631 T12: 0.0157 REMARK 3 T13: 0.0038 T23: -0.0176 REMARK 3 L TENSOR REMARK 3 L11: 0.6400 L22: 0.5633 REMARK 3 L33: 0.6540 L12: -0.2353 REMARK 3 L13: 0.0352 L23: 0.0269 REMARK 3 S TENSOR REMARK 3 S11: 0.0070 S12: -0.0343 S13: 0.0453 REMARK 3 S21: -0.0011 S22: -0.0243 S23: 0.0490 REMARK 3 S31: -0.0696 S32: -0.1401 S33: 0.0173 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 641 A 802 REMARK 3 ORIGIN FOR THE GROUP (A): 32.7910 -15.1980 25.1200 REMARK 3 T TENSOR REMARK 3 T11: 0.0507 T22: 0.0557 REMARK 3 T33: 0.0378 T12: 0.0036 REMARK 3 T13: 0.0006 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 0.5837 L22: 0.5288 REMARK 3 L33: 0.6362 L12: -0.1544 REMARK 3 L13: -0.0250 L23: 0.0833 REMARK 3 S TENSOR REMARK 3 S11: 0.0376 S12: 0.0372 S13: -0.0390 REMARK 3 S21: -0.0245 S22: -0.0525 S23: 0.0399 REMARK 3 S31: 0.0575 S32: -0.0954 S33: 0.0149 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 27 REMARK 3 ORIGIN FOR THE GROUP (A): 43.2080 -31.8450 15.6780 REMARK 3 T TENSOR REMARK 3 T11: 0.1663 T22: 0.1061 REMARK 3 T33: 0.1200 T12: 0.0311 REMARK 3 T13: -0.0097 T23: -0.0487 REMARK 3 L TENSOR REMARK 3 L11: 1.5965 L22: 1.7507 REMARK 3 L33: 1.2268 L12: 0.3813 REMARK 3 L13: 0.1285 L23: 0.0521 REMARK 3 S TENSOR REMARK 3 S11: 0.1417 S12: 0.0710 S13: -0.2365 REMARK 3 S21: -0.0117 S22: -0.0639 S23: -0.0459 REMARK 3 S31: 0.2436 S32: 0.1217 S33: -0.0778 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 37 B 65 REMARK 3 RESIDUE RANGE : B 72 B 104 REMARK 3 ORIGIN FOR THE GROUP (A): 50.1250 -25.0610 46.0290 REMARK 3 T TENSOR REMARK 3 T11: 0.0642 T22: 0.0691 REMARK 3 T33: 0.0919 T12: -0.0086 REMARK 3 T13: -0.0057 T23: 0.0197 REMARK 3 L TENSOR REMARK 3 L11: 1.9230 L22: 2.0566 REMARK 3 L33: 3.1884 L12: -0.1974 REMARK 3 L13: -0.1883 L23: 0.6599 REMARK 3 S TENSOR REMARK 3 S11: 0.0588 S12: -0.2146 S13: -0.0947 REMARK 3 S21: 0.0737 S22: -0.0375 S23: -0.0589 REMARK 3 S31: 0.0586 S32: 0.0176 S33: -0.0212 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 105 B 122 REMARK 3 ORIGIN FOR THE GROUP (A): 59.5310 -29.5820 24.0630 REMARK 3 T TENSOR REMARK 3 T11: 0.2219 T22: 0.1942 REMARK 3 T33: 0.2114 T12: 0.1391 REMARK 3 T13: -0.0380 T23: -0.0261 REMARK 3 L TENSOR REMARK 3 L11: 4.7120 L22: 2.1049 REMARK 3 L33: 2.0837 L12: 2.6301 REMARK 3 L13: -1.2965 L23: 0.3027 REMARK 3 S TENSOR REMARK 3 S11: 0.0230 S12: -0.0410 S13: -0.4621 REMARK 3 S21: 0.1567 S22: 0.1004 S23: -0.4011 REMARK 3 S31: 0.3052 S32: 0.3365 S33: -0.1234 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES; WITH TLS ADDED REMARK 4 REMARK 4 3ML1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-APR-10. REMARK 100 THE DEPOSITION ID IS D_1000058677. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUL-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.934 REMARK 200 MONOCHROMATOR : DIAMOND (111), GE(220) REMARK 200 OPTICS : SAGITALLY FOCUSING GE(220) AND A REMARK 200 MULTILAYER REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.19 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 170014 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 95.346 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : 0.08500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.53700 REMARK 200 R SYM FOR SHELL (I) : 0.53700 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 1.3.1, DM 6.0 REMARK 200 STARTING MODEL: PDB ENTRY 2NAP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS PH 5.5, 25% PEG 3350, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 71.10100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.19200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 71.10100 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 41.19200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 ASN A 2 REMARK 465 PHE A 3 REMARK 465 GLN B 0 REMARK 465 ASP B 28 REMARK 465 ILE B 29 REMARK 465 ARG B 30 REMARK 465 ARG B 31 REMARK 465 THR B 32 REMARK 465 ARG B 33 REMARK 465 ASN B 34 REMARK 465 TYR B 35 REMARK 465 THR B 36 REMARK 465 ARG B 66 REMARK 465 THR B 67 REMARK 465 GLU B 68 REMARK 465 GLU B 69 REMARK 465 THR B 70 REMARK 465 GLN B 71 REMARK 465 ARG B 125 REMARK 465 ARG B 126 REMARK 465 PRO B 127 REMARK 465 GLY B 128 REMARK 465 ALA B 129 REMARK 465 LYS B 130 REMARK 465 GLY B 131 REMARK 465 ALA B 132 REMARK 465 ALA B 133 REMARK 465 LYS B 134 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 6 CG OD1 OD2 REMARK 470 LYS A 638 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O1D HEC B 1129 O HOH B 141 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PHE A 218 CZ PHE A 218 CE2 0.121 REMARK 500 TYR A 362 CD1 TYR A 362 CE1 0.098 REMARK 500 TYR A 485 CE1 TYR A 485 CZ 0.084 REMARK 500 GLY B 48 N GLY B 48 CA 0.094 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 69 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ASP A 87 CB - CG - OD1 ANGL. DEV. = 6.2 DEGREES REMARK 500 MET A 240 CG - SD - CE ANGL. DEV. = -16.9 DEGREES REMARK 500 ASP A 311 CB - CG - OD1 ANGL. DEV. = 6.8 DEGREES REMARK 500 PHE A 348 CB - CG - CD2 ANGL. DEV. = -4.7 DEGREES REMARK 500 LEU A 364 CB - CG - CD1 ANGL. DEV. = -10.8 DEGREES REMARK 500 LEU A 401 CB - CG - CD1 ANGL. DEV. = -10.4 DEGREES REMARK 500 TYR A 509 CB - CG - CD2 ANGL. DEV. = -3.7 DEGREES REMARK 500 TYR A 644 CB - CG - CD2 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG A 645 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 TYR A 688 CB - CG - CD2 ANGL. DEV. = -4.1 DEGREES REMARK 500 ARG A 694 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 750 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG A 750 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG A 756 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG B 7 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG B 64 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ASP B 90 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ARG B 94 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 21 -118.18 -102.71 REMARK 500 CYS A 152 -60.24 -133.73 REMARK 500 GLU A 168 155.84 81.64 REMARK 500 ASN A 188 70.06 -103.39 REMARK 500 GLN A 235 -7.79 78.73 REMARK 500 TYR A 274 23.49 -145.33 REMARK 500 THR A 345 -128.51 -142.38 REMARK 500 SER A 386 32.67 -142.51 REMARK 500 THR A 390 -69.34 -99.55 REMARK 500 ASP A 404 -1.95 75.64 REMARK 500 GLU A 467 -70.62 -123.78 REMARK 500 TRP A 502 -117.79 36.62 REMARK 500 ARG A 571 58.25 -112.90 REMARK 500 ASN A 589 89.42 -153.75 REMARK 500 HIS A 700 -119.06 48.17 REMARK 500 PHE A 715 83.41 -166.53 REMARK 500 ARG A 754 45.56 -140.73 REMARK 500 ASP A 781 49.93 -85.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 THE RESIDUE A 900 WAS ORIGINALLY DEPOSITED AS A ISOLATED SULFUR REMARK 600 ATOM. THE HETEROGEN S IS NOW OBSOLETE IN THE PDB HETGROUP REMARK 600 DICTIONARY. IN THIS ENTRY, IT IS TREATED AS A PART OF MOS A1802. REMARK 600 OTHER SULFURS OF MOLYBDENUM ATOM ARE SUPPLIED FROM SURROUNDING MGDS. REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A1801 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 19 SG REMARK 620 2 SF4 A1801 S1 115.7 REMARK 620 3 SF4 A1801 S2 106.6 106.0 REMARK 620 4 SF4 A1801 S3 117.5 105.2 105.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A1801 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 22 SG REMARK 620 2 SF4 A1801 S2 117.1 REMARK 620 3 SF4 A1801 S3 116.2 104.2 REMARK 620 4 SF4 A1801 S4 108.1 104.3 105.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A1801 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 26 SG REMARK 620 2 SF4 A1801 S1 113.9 REMARK 620 3 SF4 A1801 S2 106.9 107.1 REMARK 620 4 SF4 A1801 S4 118.6 104.5 105.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A1801 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 54 SG REMARK 620 2 SF4 A1801 S1 117.7 REMARK 620 3 SF4 A1801 S3 101.7 104.3 REMARK 620 4 SF4 A1801 S4 120.9 104.1 106.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MOS A1802 MO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 152 SG REMARK 620 2 MOS A1802 S 66.6 REMARK 620 3 MGD A1803 S12 128.5 87.3 REMARK 620 4 MGD A1803 S13 88.9 135.3 79.6 REMARK 620 5 MGD A1804 S13 134.1 92.6 88.0 129.0 REMARK 620 6 MGD A1804 S12 79.7 124.6 146.2 83.4 80.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC B1128 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 44 NE2 REMARK 620 2 HEC B1128 NA 92.1 REMARK 620 3 HEC B1128 NB 91.3 92.0 REMARK 620 4 HEC B1128 NC 90.2 177.7 88.1 REMARK 620 5 HEC B1128 ND 90.6 88.0 178.1 91.9 REMARK 620 6 HIS B 62 NE2 178.7 88.6 87.6 89.0 90.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC B1129 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 79 NE2 REMARK 620 2 HEC B1129 NA 91.8 REMARK 620 3 HEC B1129 NB 92.0 90.0 REMARK 620 4 HEC B1129 NC 90.6 177.6 90.1 REMARK 620 5 HEC B1129 ND 90.3 89.0 177.5 90.8 REMARK 620 6 HIS B 102 NE2 178.3 86.5 88.0 91.0 89.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SF4 A 1801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MOS A 1802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MGD A 1803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MGD A 1804 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC B 1128 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC B 1129 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3O5A RELATED DB: PDB REMARK 900 PARTIALLY REDUCED PERIPLASMIC NITRATE REDUCTASE USING IONIC LIQUIDS DBREF 3ML1 A 1 802 UNP P39185 NAPA_RALEH 30 831 DBREF 3ML1 B 0 134 UNP P39186 NAPB_RALEH 35 169 SEQRES 1 A 802 ALA ASN PHE VAL THR ASP SER GLU VAL THR LYS LEU LYS SEQRES 2 A 802 TRP SER LYS ALA PRO CYS ARG PHE CYS GLY THR GLY CYS SEQRES 3 A 802 GLY VAL THR VAL ALA VAL LYS ASP ASN LYS VAL VAL ALA SEQRES 4 A 802 THR GLN GLY ASP PRO GLN ALA GLU VAL ASN LYS GLY LEU SEQRES 5 A 802 ASN CYS VAL LYS GLY TYR PHE LEU SER LYS ILE MET TYR SEQRES 6 A 802 GLY GLN ASP ARG LEU THR ARG PRO LEU MET ARG MET LYS SEQRES 7 A 802 ASN GLY LYS TYR ASP LYS ASN GLY ASP PHE ALA PRO VAL SEQRES 8 A 802 THR TRP ASP GLN ALA PHE ASP GLU MET GLU ARG GLN PHE SEQRES 9 A 802 LYS ARG VAL LEU LYS GLU LYS GLY PRO THR ALA VAL GLY SEQRES 10 A 802 MET PHE GLY SER GLY GLN TRP THR VAL TRP GLU GLY TYR SEQRES 11 A 802 ALA ALA ALA LYS LEU TYR LYS ALA GLY PHE ARG SER ASN SEQRES 12 A 802 ASN ILE ASP PRO ASN ALA ARG HIS CYS MET ALA SER ALA SEQRES 13 A 802 ALA ALA GLY PHE MET ARG THR PHE GLY MET ASP GLU PRO SEQRES 14 A 802 MET GLY CYS TYR ASP ASP PHE GLU ALA ALA ASP ALA PHE SEQRES 15 A 802 VAL LEU TRP GLY SER ASN MET ALA GLU MET HIS PRO ILE SEQRES 16 A 802 LEU TRP THR ARG VAL THR ASP ARG ARG LEU SER HIS PRO SEQRES 17 A 802 LYS THR ARG VAL VAL VAL LEU SER THR PHE THR HIS ARG SEQRES 18 A 802 CYS PHE ASP LEU ALA ASP ILE GLY ILE ILE PHE LYS PRO SEQRES 19 A 802 GLN THR ASP LEU ALA MET LEU ASN TYR ILE ALA ASN TYR SEQRES 20 A 802 ILE ILE ARG ASN ASN LYS VAL ASN LYS ASP PHE VAL ASN SEQRES 21 A 802 LYS HIS THR VAL PHE LYS GLU GLY VAL THR ASP ILE GLY SEQRES 22 A 802 TYR GLY LEU ARG PRO ASP HIS PRO LEU GLN LYS ALA ALA SEQRES 23 A 802 LYS ASN ALA SER ASP PRO GLY ALA ALA LYS VAL ILE THR SEQRES 24 A 802 PHE ASP GLU PHE ALA LYS PHE VAL SER LYS TYR ASP ALA SEQRES 25 A 802 ASP TYR VAL SER LYS LEU SER ALA VAL PRO LYS ALA LYS SEQRES 26 A 802 LEU ASP GLN LEU ALA GLU LEU TYR ALA ASP PRO ASN ILE SEQRES 27 A 802 LYS VAL MET SER LEU TRP THR MET GLY PHE ASN GLN HIS SEQRES 28 A 802 THR ARG GLY THR TRP ALA ASN ASN MET VAL TYR ASN LEU SEQRES 29 A 802 HIS LEU LEU THR GLY LYS ILE ALA THR PRO GLY ASN SER SEQRES 30 A 802 PRO PHE SER LEU THR GLY GLN PRO SER ALA CYS GLY THR SEQRES 31 A 802 ALA ARG GLU VAL GLY THR PHE SER HIS ARG LEU PRO ALA SEQRES 32 A 802 ASP MET VAL VAL THR ASN PRO LYS HIS ARG GLU GLU ALA SEQRES 33 A 802 GLU ARG ILE TRP LYS LEU PRO PRO GLY THR ILE PRO ASP SEQRES 34 A 802 LYS PRO GLY TYR ASP ALA VAL LEU GLN ASN ARG MET LEU SEQRES 35 A 802 LYS ASP GLY LYS LEU ASN ALA TYR TRP VAL GLN VAL ASN SEQRES 36 A 802 ASN ASN MET GLN ALA ALA ALA ASN LEU MET GLU GLU GLY SEQRES 37 A 802 LEU PRO GLY TYR ARG ASN PRO ALA ASN PHE ILE VAL VAL SEQRES 38 A 802 SER ASP ALA TYR PRO THR VAL THR ALA LEU ALA ALA ASP SEQRES 39 A 802 LEU VAL LEU PRO SER ALA MET TRP VAL GLU LYS GLU GLY SEQRES 40 A 802 ALA TYR GLY ASN ALA GLU ARG ARG THR GLN PHE TRP HIS SEQRES 41 A 802 GLN LEU VAL ASP ALA PRO GLY GLU ALA ARG SER ASP LEU SEQRES 42 A 802 TRP GLN LEU VAL GLU PHE ALA LYS ARG PHE LYS VAL GLU SEQRES 43 A 802 GLU VAL TRP PRO PRO GLU LEU ILE ALA LYS LYS PRO GLU SEQRES 44 A 802 TYR LYS GLY LYS THR LEU TYR ASP VAL LEU TYR ARG ASN SEQRES 45 A 802 GLY GLN VAL ASP LYS PHE PRO LEU LYS ASP VAL ASN ALA SEQRES 46 A 802 GLU TYR HIS ASN ALA GLU ALA LYS ALA PHE GLY PHE TYR SEQRES 47 A 802 LEU GLN LYS GLY LEU PHE GLU GLU TYR ALA THR PHE GLY SEQRES 48 A 802 ARG GLY HIS GLY HIS ASP LEU ALA PRO PHE ASP ALA TYR SEQRES 49 A 802 HIS GLU ALA ARG GLY LEU ARG TRP PRO VAL VAL ASN GLY SEQRES 50 A 802 LYS GLU THR ARG TRP ARG TYR ARG GLU GLY SER ASP PRO SEQRES 51 A 802 TYR VAL LYS ALA GLY THR GLY PHE GLN PHE TYR GLY ASN SEQRES 52 A 802 PRO ASP GLY LYS ALA VAL ILE PHE ALA LEU PRO TYR GLU SEQRES 53 A 802 PRO PRO ALA GLU SER PRO ASP LYS GLU TYR PRO TYR TRP SEQRES 54 A 802 LEU VAL THR GLY ARG VAL LEU GLU HIS TRP HIS SER GLY SEQRES 55 A 802 SER MET THR ARG ARG VAL PRO GLU LEU TYR ARG SER PHE SEQRES 56 A 802 PRO ASN ALA VAL VAL PHE MET HIS PRO GLU ASP ALA LYS SEQRES 57 A 802 ALA LEU GLY LEU ARG ARG GLY VAL GLU VAL GLU VAL VAL SEQRES 58 A 802 SER ARG ARG GLY ARG MET ARG SER ARG ILE GLU THR ARG SEQRES 59 A 802 GLY ARG ASP ALA PRO PRO ARG GLY LEU VAL PHE VAL PRO SEQRES 60 A 802 TRP PHE ASP ALA SER GLN LEU ILE ASN LYS VAL THR LEU SEQRES 61 A 802 ASP ALA THR CYS PRO ILE SER LEU GLN THR ASP PHE LYS SEQRES 62 A 802 LYS CYS ALA VAL LYS ILE VAL LYS VAL SEQRES 1 B 135 GLN GLY LEU VAL ASP ALA MET ARG GLY PRO THR ALA ILE SEQRES 2 B 135 ALA ASN GLU PRO ARG ALA PRO LEU LEU TYR PRO THR GLU SEQRES 3 B 135 ASN LYS ASP ILE ARG ARG THR ARG ASN TYR THR MET GLN SEQRES 4 B 135 PRO PRO THR ILE PRO HIS LYS ILE ASP GLY TYR GLN LEU SEQRES 5 B 135 ASP LYS ASP PHE ASN ARG CYS MET PHE CYS HIS ALA ARG SEQRES 6 B 135 THR ARG THR GLU GLU THR GLN ALA ILE PRO VAL SER ILE SEQRES 7 B 135 THR HIS TYR MET ASP ARG ASP ASN ASN VAL LEU ALA ASP SEQRES 8 B 135 VAL SER PRO ARG ARG TYR PHE CYS THR GLN CYS HIS VAL SEQRES 9 B 135 PRO GLN ALA ASP THR LYS PRO LEU ILE GLY ASN ASN PHE SEQRES 10 B 135 VAL ASP VAL ASP THR ILE LEU LYS ARG ARG PRO GLY ALA SEQRES 11 B 135 LYS GLY ALA ALA LYS HET SF4 A1801 8 HET MOS A1802 2 HET MGD A1803 47 HET MGD A1804 47 HET HEC B1128 43 HET HEC B1129 43 HETNAM SF4 IRON/SULFUR CLUSTER HETNAM MOS DIOXOTHIOMOLYBDENUM(VI) ION HETNAM MGD 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8- HETNAM 2 MGD OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE HETNAM 3 MGD DINUCLEOTIDE HETNAM HEC HEME C HETSYN MGD MOLYBDOPTERIN GUANOSINE DINUCLEOTIDE FORMUL 3 SF4 FE4 S4 FORMUL 4 MOS H MO O2 S FORMUL 5 MGD 2(C20 H26 N10 O13 P2 S2) FORMUL 7 HEC 2(C34 H34 FE N4 O4) FORMUL 9 HOH *672(H2 O) HELIX 1 1 CYS A 54 PHE A 59 1 6 HELIX 2 2 LEU A 60 ILE A 63 5 4 HELIX 3 3 THR A 92 LYS A 111 1 20 HELIX 4 4 GLY A 112 THR A 114 5 3 HELIX 5 5 THR A 125 ALA A 138 1 14 HELIX 6 6 ALA A 149 CYS A 152 5 4 HELIX 7 7 MET A 153 GLY A 165 1 13 HELIX 8 8 CYS A 172 ALA A 178 5 7 HELIX 9 9 ASN A 188 HIS A 193 1 6 HELIX 10 10 HIS A 193 HIS A 207 1 15 HELIX 11 11 HIS A 220 LEU A 225 5 6 HELIX 12 12 THR A 236 ASN A 251 1 16 HELIX 13 13 ASN A 255 HIS A 262 1 8 HELIX 14 14 HIS A 280 ALA A 286 1 7 HELIX 15 15 THR A 299 LYS A 309 1 11 HELIX 16 16 ASP A 311 ALA A 320 1 10 HELIX 17 17 PRO A 322 ASP A 335 1 14 HELIX 18 18 THR A 345 GLN A 350 1 6 HELIX 19 19 ARG A 353 GLY A 369 1 17 HELIX 20 20 THR A 390 GLY A 395 1 6 HELIX 21 21 ASN A 409 TRP A 420 1 12 HELIX 22 22 ASP A 434 ASP A 444 1 11 HELIX 23 23 ASN A 456 ALA A 461 1 6 HELIX 24 24 GLU A 467 ASN A 474 1 8 HELIX 25 25 THR A 487 ALA A 492 1 6 HELIX 26 26 MET A 501 LYS A 505 5 5 HELIX 27 27 ASP A 532 LYS A 541 1 10 HELIX 28 28 LYS A 544 TRP A 549 1 6 HELIX 29 29 PRO A 550 ALA A 555 1 6 HELIX 30 30 LYS A 556 LYS A 561 5 6 HELIX 31 31 THR A 564 TYR A 570 1 7 HELIX 32 32 PRO A 579 VAL A 583 5 5 HELIX 33 33 ASN A 589 GLY A 596 1 8 HELIX 34 34 TYR A 598 ARG A 612 1 15 HELIX 35 35 PRO A 620 ALA A 627 1 8 HELIX 36 36 MET A 704 ARG A 707 5 4 HELIX 37 37 VAL A 708 PHE A 715 1 8 HELIX 38 38 HIS A 723 LEU A 730 1 8 HELIX 39 39 LEU A 774 VAL A 778 5 5 HELIX 40 40 ARG B 57 ALA B 63 1 7 HELIX 41 41 SER B 76 MET B 81 5 6 HELIX 42 42 SER B 92 PHE B 97 1 6 HELIX 43 43 CYS B 98 CYS B 101 5 4 HELIX 44 44 ASP B 118 LEU B 123 1 6 SHEET 1 A 3 LYS A 13 PRO A 18 0 SHEET 2 A 3 GLY A 27 LYS A 33 -1 O VAL A 28 N ALA A 17 SHEET 3 A 3 LYS A 36 GLY A 42 -1 O ALA A 39 N ALA A 31 SHEET 1 B 7 LYS A 81 TYR A 82 0 SHEET 2 B 7 LEU A 74 LYS A 78 -1 N LYS A 78 O LYS A 81 SHEET 3 B 7 LEU A 495 ALA A 500 -1 O VAL A 496 N LEU A 74 SHEET 4 B 7 PHE A 478 ASP A 483 1 N VAL A 481 O LEU A 497 SHEET 5 B 7 ALA A 449 GLN A 453 1 N TYR A 450 O VAL A 480 SHEET 6 B 7 VAL A 116 GLY A 120 1 N PHE A 119 O GLN A 453 SHEET 7 B 7 ILE A 145 PRO A 147 1 O ASP A 146 N GLY A 120 SHEET 1 C 4 ASP A 87 PRO A 90 0 SHEET 2 C 4 LEU A 74 LYS A 78 -1 N MET A 75 O ALA A 89 SHEET 3 C 4 LEU A 495 ALA A 500 -1 O VAL A 496 N LEU A 74 SHEET 4 C 4 ARG A 530 SER A 531 1 O ARG A 530 N PRO A 498 SHEET 1 D 5 ILE A 228 ILE A 231 0 SHEET 2 D 5 ARG A 211 SER A 216 1 N VAL A 214 O ILE A 230 SHEET 3 D 5 ALA A 181 TRP A 185 1 N PHE A 182 O VAL A 213 SHEET 4 D 5 VAL A 340 TRP A 344 1 O LEU A 343 N VAL A 183 SHEET 5 D 5 SER A 377 SER A 380 1 O PHE A 379 N SER A 342 SHEET 1 E 3 ALA A 295 ILE A 298 0 SHEET 2 E 3 THR A 263 GLY A 268 -1 N GLU A 267 O LYS A 296 SHEET 3 E 3 ALA A 668 ALA A 672 1 O ILE A 670 N VAL A 264 SHEET 1 F 3 GLY A 507 GLY A 510 0 SHEET 2 F 3 ARG A 515 TRP A 519 -1 O GLN A 517 N TYR A 509 SHEET 3 F 3 LEU A 630 ARG A 631 -1 O LEU A 630 N THR A 516 SHEET 1 G 7 TYR A 688 GLY A 693 0 SHEET 2 G 7 LEU A 763 PRO A 767 1 O VAL A 764 N TRP A 689 SHEET 3 G 7 VAL A 719 MET A 722 -1 N PHE A 721 O PHE A 765 SHEET 4 G 7 ARG A 746 GLU A 752 1 O GLU A 752 N VAL A 720 SHEET 5 G 7 GLU A 737 VAL A 741 -1 N VAL A 738 O SER A 749 SHEET 6 G 7 CYS A 795 LYS A 801 -1 O VAL A 800 N GLU A 739 SHEET 7 G 7 TYR A 688 GLY A 693 -1 N TYR A 688 O VAL A 797 SHEET 1 H 2 LEU B 51 ASP B 52 0 SHEET 2 H 2 PHE B 55 ASN B 56 -1 O PHE B 55 N ASP B 52 LINK SG CYS B 58 CAB HEC B1128 1555 1555 1.89 LINK SG CYS B 61 CAC HEC B1128 1555 1555 2.21 LINK SG CYS B 98 CAB HEC B1129 1555 1555 1.78 LINK SG CYS B 101 CAC HEC B1129 1555 1555 2.09 LINK SG CYS A 19 FE4 SF4 A1801 1555 1555 2.36 LINK SG CYS A 22 FE1 SF4 A1801 1555 1555 2.33 LINK SG CYS A 26 FE3 SF4 A1801 1555 1555 2.33 LINK SG CYS A 54 FE2 SF4 A1801 1555 1555 2.38 LINK SG CYS A 152 MO MOS A1802 1555 1555 2.46 LINK MO MOS A1802 S12 MGD A1803 1555 1555 2.40 LINK MO MOS A1802 S13 MGD A1803 1555 1555 2.41 LINK MO MOS A1802 S13 MGD A1804 1555 1555 2.34 LINK MO MOS A1802 S12 MGD A1804 1555 1555 2.42 LINK NE2 HIS B 44 FE HEC B1128 1555 1555 2.10 LINK NE2 HIS B 62 FE HEC B1128 1555 1555 2.08 LINK NE2 HIS B 79 FE HEC B1129 1555 1555 2.04 LINK NE2 HIS B 102 FE HEC B1129 1555 1555 2.03 CISPEP 1 TRP A 632 PRO A 633 0 -1.97 SITE 1 AC1 11 CYS A 19 PHE A 21 CYS A 22 GLY A 25 SITE 2 AC1 11 CYS A 26 ASN A 53 CYS A 54 LYS A 56 SITE 3 AC1 11 GLY A 57 PRO A 194 ILE A 195 SITE 1 AC2 5 CYS A 152 GLN A 384 ARG A 694 MGD A1803 SITE 2 AC2 5 MGD A1804 SITE 1 AC3 34 ARG A 20 GLN A 123 ASN A 148 CYS A 152 SITE 2 AC3 34 GLN A 350 GLN A 384 VAL A 454 ASN A 455 SITE 3 AC3 34 ASN A 456 ASN A 457 ALA A 460 SER A 482 SITE 4 AC3 34 ASP A 483 THR A 487 SER A 499 ALA A 500 SITE 5 AC3 34 MET A 501 LYS A 505 ASP A 532 THR A 692 SITE 6 AC3 34 ARG A 694 TRP A 699 HIS A 700 SER A 701 SITE 7 AC3 34 SER A 703 TRP A 768 ASN A 776 PHE A 792 SITE 8 AC3 34 LYS A 793 HOH A 860 HOH A 937 HOH A 991 SITE 9 AC3 34 MOS A1802 MGD A1804 SITE 1 AC4 38 CYS A 22 LYS A 56 CYS A 152 TRP A 185 SITE 2 AC4 38 GLY A 186 ASN A 188 GLU A 191 MET A 192 SITE 3 AC4 38 SER A 216 THR A 217 PHE A 218 HIS A 220 SITE 4 AC4 38 PHE A 232 PRO A 234 GLN A 235 ASP A 237 SITE 5 AC4 38 THR A 345 MET A 346 GLY A 347 PHE A 348 SITE 6 AC4 38 GLY A 383 GLN A 384 GLY A 693 ARG A 694 SITE 7 AC4 38 VAL A 695 LEU A 696 HIS A 698 TRP A 699 SITE 8 AC4 38 HIS A 700 LYS A 793 LYS A 794 HOH A 803 SITE 9 AC4 38 HOH A 871 HOH A 943 HOH A 956 HOH A 985 SITE 10 AC4 38 MOS A1802 MGD A1803 SITE 1 AC5 14 PRO B 40 PRO B 43 HIS B 44 TYR B 49 SITE 2 AC5 14 ARG B 57 CYS B 58 CYS B 61 HIS B 62 SITE 3 AC5 14 ALA B 72 ILE B 73 CYS B 98 HIS B 102 SITE 4 AC5 14 HOH B 455 HEC B1129 SITE 1 AC6 22 ASN A 53 TYR A 58 GLN B 38 ILE B 73 SITE 2 AC6 22 VAL B 75 SER B 76 ILE B 77 THR B 78 SITE 3 AC6 22 HIS B 79 ARG B 95 PHE B 97 CYS B 98 SITE 4 AC6 22 CYS B 101 HIS B 102 HOH B 141 HOH B 215 SITE 5 AC6 22 HOH B 302 HOH B 353 HOH B 455 HOH B 513 SITE 6 AC6 22 HOH B 553 HEC B1128 CRYST1 142.202 82.384 96.837 90.00 100.72 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007032 0.000000 0.001331 0.00000 SCALE2 0.000000 0.012138 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010510 0.00000