HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 21-APR-10 3MNF TITLE CRYSTAL STRUCTURE OF PAC2 FAMILY PROTEIN FROM STREPTOMYCES AVERMITILIS TITLE 2 MA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PAC2 FAMILY PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES AVERMITILIS; SOURCE 3 ORGANISM_TAXID: 227882; SOURCE 4 STRAIN: MA-4680; SOURCE 5 GENE: SAV6650, SAV_6650; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG19 KEYWDS PSI2, MCSG, STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR C.CHANG,C.HATZOS,T.MORGAN,J.BEARDEN,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 2 08-NOV-17 3MNF 1 REMARK REVDAT 1 05-MAY-10 3MNF 0 JRNL AUTH C.CHANG,C.HATZOS,T.MORGAN,J.BEARDEN,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF PAC2 FAMILY PROTEIN FROM STREPTOMYCES JRNL TITL 2 AVERMITILIS MA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 10484 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 502 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.98 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 668 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.31 REMARK 3 BIN R VALUE (WORKING SET) : 0.2360 REMARK 3 BIN FREE R VALUE SET COUNT : 28 REMARK 3 BIN FREE R VALUE : 0.2430 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1747 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 76.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 88.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.74000 REMARK 3 B22 (A**2) : -0.74000 REMARK 3 B33 (A**2) : 1.10000 REMARK 3 B12 (A**2) : -0.37000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.500 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.306 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.232 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 26.757 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.925 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.919 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1790 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2459 ; 1.511 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 233 ; 6.485 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 74 ;39.350 ;23.919 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 246 ;17.272 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;18.461 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 284 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1391 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1171 ; 0.540 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1871 ; 1.046 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 619 ; 1.557 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 588 ; 2.716 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 10 A 52 REMARK 3 ORIGIN FOR THE GROUP (A): 53.8092 55.7198 34.4350 REMARK 3 T TENSOR REMARK 3 T11: 0.1213 T22: 0.2078 REMARK 3 T33: 0.2106 T12: 0.0734 REMARK 3 T13: 0.1423 T23: 0.0879 REMARK 3 L TENSOR REMARK 3 L11: 5.0159 L22: 3.5814 REMARK 3 L33: 4.6110 L12: -1.7412 REMARK 3 L13: 0.2098 L23: 1.1100 REMARK 3 S TENSOR REMARK 3 S11: 0.2128 S12: -0.2480 S13: 0.0994 REMARK 3 S21: 0.1927 S22: 0.0681 S23: 0.2842 REMARK 3 S31: -0.1055 S32: -0.7718 S33: -0.2809 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 53 A 75 REMARK 3 ORIGIN FOR THE GROUP (A): 55.4237 37.7204 35.2197 REMARK 3 T TENSOR REMARK 3 T11: 0.1507 T22: 0.3432 REMARK 3 T33: 0.4598 T12: -0.0405 REMARK 3 T13: -0.0193 T23: 0.1940 REMARK 3 L TENSOR REMARK 3 L11: 3.8002 L22: 8.0211 REMARK 3 L33: 3.5528 L12: 3.2190 REMARK 3 L13: -3.5177 L23: -1.9239 REMARK 3 S TENSOR REMARK 3 S11: -0.0156 S12: 0.2535 S13: 0.0519 REMARK 3 S21: 0.3238 S22: 0.1069 S23: 0.6545 REMARK 3 S31: 0.1144 S32: -0.4026 S33: -0.0913 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 76 A 119 REMARK 3 ORIGIN FOR THE GROUP (A): 57.0637 56.7978 27.1985 REMARK 3 T TENSOR REMARK 3 T11: 0.1516 T22: 0.1895 REMARK 3 T33: 0.1854 T12: 0.0952 REMARK 3 T13: 0.1181 T23: 0.0518 REMARK 3 L TENSOR REMARK 3 L11: 4.4827 L22: 3.7570 REMARK 3 L33: 3.9433 L12: -0.7377 REMARK 3 L13: 0.9536 L23: -1.0451 REMARK 3 S TENSOR REMARK 3 S11: 0.1074 S12: 0.2042 S13: 0.4282 REMARK 3 S21: -0.2143 S22: 0.0648 S23: 0.1238 REMARK 3 S31: -0.2607 S32: -0.5534 S33: -0.1722 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 120 A 214 REMARK 3 ORIGIN FOR THE GROUP (A): 61.1904 66.6411 40.5754 REMARK 3 T TENSOR REMARK 3 T11: 0.4008 T22: 0.1759 REMARK 3 T33: 0.3367 T12: 0.1124 REMARK 3 T13: 0.1692 T23: -0.1028 REMARK 3 L TENSOR REMARK 3 L11: 5.2642 L22: 2.8998 REMARK 3 L33: 4.9479 L12: -1.1249 REMARK 3 L13: -0.5034 L23: 0.3093 REMARK 3 S TENSOR REMARK 3 S11: 0.0327 S12: -0.6042 S13: 0.9300 REMARK 3 S21: 0.4314 S22: 0.2540 S23: -0.1885 REMARK 3 S31: -0.8988 S32: -0.2183 S33: -0.2867 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 215 A 256 REMARK 3 ORIGIN FOR THE GROUP (A): 49.3189 63.4400 55.2009 REMARK 3 T TENSOR REMARK 3 T11: 0.7699 T22: 0.9917 REMARK 3 T33: 0.3761 T12: 0.2752 REMARK 3 T13: 0.4611 T23: -0.1134 REMARK 3 L TENSOR REMARK 3 L11: 6.4154 L22: 6.3137 REMARK 3 L33: 13.3685 L12: -0.6832 REMARK 3 L13: 5.5775 L23: 0.0949 REMARK 3 S TENSOR REMARK 3 S11: 0.0383 S12: -1.6339 S13: 0.5315 REMARK 3 S21: 1.7904 S22: 0.0369 S23: 1.1712 REMARK 3 S31: -0.4417 S32: -1.4633 S33: -0.0752 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3MNF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-APR-10. REMARK 100 THE DEPOSITION ID IS D_1000058763. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAR-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97929 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10559 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.970 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 12.60 REMARK 200 R MERGE (I) : 0.10600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 41.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.10 REMARK 200 R MERGE FOR SHELL (I) : 0.84700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.840 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000, SHELXD, MLPHARE, DM, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0M NA/K TARTRATE, 0.1M MES, PH 6.0, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 40.56050 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 40.56050 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 40.56050 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 40.56050 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 40.56050 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 40.56050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: HEXAMER WITH OPERATORS (X,Y,Z), (-Y+1,X-Y,Z), (-X+Y+1,-X+1, REMARK 300 Z), (-Y+1,-X+1,-Z+1/2), (X,X-Y,-Z+1/2), (-X+Y+1,Y,-Z+1/2) REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 61860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -127.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 143.94300 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 71.97150 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 124.65829 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.500000 -0.866025 0.000000 71.97150 REMARK 350 BIOMT2 4 -0.866025 -0.500000 0.000000 124.65829 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 40.56050 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 143.94300 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 40.56050 REMARK 350 BIOMT1 6 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 6 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 40.56050 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 8 REMARK 465 ASN A 9 REMARK 465 ALA A 10 REMARK 465 ILE A 11 REMARK 465 ALA A 238 REMARK 465 GLU A 239 REMARK 465 SER A 249 REMARK 465 LEU A 250 REMARK 465 GLU A 251 REMARK 465 GLU A 252 REMARK 465 ALA A 253 REMARK 465 ARG A 254 REMARK 465 ASP A 255 REMARK 465 THR A 256 REMARK 465 ALA A 257 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 41 CG CD CE NZ REMARK 470 GLU A 43 CG CD OE1 OE2 REMARK 470 ARG A 83 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 87 CB CG CD OE1 OE2 REMARK 470 LYS A 88 CG CD CE NZ REMARK 470 THR A 136 OG1 CG2 REMARK 470 ARG A 137 CG CD NE CZ NH1 NH2 REMARK 470 THR A 153 OG1 CG2 REMARK 470 LEU A 156 CG CD1 CD2 REMARK 470 ASP A 240 CG OD1 OD2 REMARK 470 SER A 241 OG REMARK 470 GLU A 242 CG CD OE1 OE2 REMARK 470 VAL A 243 CG1 CG2 REMARK 470 GLU A 245 CG CD OE1 OE2 REMARK 470 TYR A 246 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL A 247 CG1 CG2 REMARK 470 GLN A 248 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 196 C - N - CA ANGL. DEV. = 12.5 DEGREES REMARK 500 PRO A 197 C - N - CA ANGL. DEV. = -11.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 76 -169.47 -162.59 REMARK 500 LYS A 88 74.34 -115.66 REMARK 500 ARG A 103 50.86 39.96 REMARK 500 LEU A 156 96.49 -20.34 REMARK 500 GLU A 158 175.35 171.86 REMARK 500 PRO A 196 -33.55 -23.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC7488.2 RELATED DB: TARGETDB DBREF 3MNF A 11 257 UNP Q828L9 Q828L9_STRAW 11 257 SEQADV 3MNF SER A 8 UNP Q828L9 EXPRESSION TAG SEQADV 3MNF ASN A 9 UNP Q828L9 EXPRESSION TAG SEQADV 3MNF ALA A 10 UNP Q828L9 EXPRESSION TAG SEQRES 1 A 250 SER ASN ALA ILE ASP PRO VAL MSE VAL ALA ALA PHE GLU SEQRES 2 A 250 GLY TRP ASN ASP ALA GLY ASP ALA ALA SER THR ALA VAL SEQRES 3 A 250 ALA HIS LEU ASP ARG GLU TRP LYS GLY GLU VAL PHE ALA SEQRES 4 A 250 ALA LEU ASP ALA GLU ASP TYR TYR ASP PHE GLN VAL ASN SEQRES 5 A 250 ARG PRO THR VAL TRP LEU ASP GLY GLY VAL ARG LYS ILE SEQRES 6 A 250 THR TRP PRO THR THR ARG LEU SER VAL VAL ARG VAL GLY SEQRES 7 A 250 GLY GLU LYS PRO ARG ASP LEU VAL LEU VAL ARG GLY ILE SEQRES 8 A 250 GLU PRO SER MSE ARG TRP ARG SER PHE CYS ASN GLU LEU SEQRES 9 A 250 LEU ALA PHE ALA HIS GLU LEU GLY VAL GLU LEU VAL VAL SEQRES 10 A 250 VAL LEU GLY ALA LEU LEU GLY ASP THR PRO HIS THR ARG SEQRES 11 A 250 PRO VAL PRO VAL SER GLY VAL THR SER ASP PRO ASP LEU SEQRES 12 A 250 ALA ARG THR MSE ASP LEU GLU GLU THR LYS TYR GLU GLY SEQRES 13 A 250 PRO THR GLY ILE VAL GLY ILE LEU GLN GLU ALA CYS THR SEQRES 14 A 250 HIS ALA GLY VAL PRO ALA VAL SER LEU TRP ALA ALA VAL SEQRES 15 A 250 PRO HIS TYR VAL SER GLN PRO PRO ASN PRO LYS ALA THR SEQRES 16 A 250 LEU ALA LEU LEU ASN ARG LEU GLU ASP LEU ILE ASP VAL SEQRES 17 A 250 ARG ILE PRO LEU GLY GLU LEU PRO GLU ASP ALA ARG ALA SEQRES 18 A 250 TRP GLN VAL GLY VAL ASP GLN LEU ALA ALA GLU ASP SER SEQRES 19 A 250 GLU VAL ALA GLU TYR VAL GLN SER LEU GLU GLU ALA ARG SEQRES 20 A 250 ASP THR ALA MODRES 3MNF MSE A 15 MET SELENOMETHIONINE MODRES 3MNF MSE A 102 MET SELENOMETHIONINE MODRES 3MNF MSE A 154 MET SELENOMETHIONINE HET MSE A 15 8 HET MSE A 102 8 HET MSE A 154 8 HET CL A 301 1 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION FORMUL 1 MSE 3(C5 H11 N O2 SE) FORMUL 2 CL CL 1- HELIX 1 1 ASP A 27 TRP A 40 1 14 HELIX 2 2 ASP A 49 TYR A 53 5 5 HELIX 3 3 ARG A 103 GLY A 119 1 17 HELIX 4 4 ASP A 147 MSE A 154 1 8 HELIX 5 5 GLY A 166 GLY A 179 1 14 HELIX 6 6 TYR A 192 SER A 194 5 3 HELIX 7 7 ASN A 198 ASP A 214 1 17 HELIX 8 8 GLU A 221 ASP A 234 1 14 HELIX 9 9 SER A 241 TYR A 246 1 6 SHEET 1 A 7 GLU A 43 ALA A 47 0 SHEET 2 A 7 THR A 77 GLY A 85 -1 O LEU A 79 N ALA A 46 SHEET 3 A 7 PRO A 89 ILE A 98 -1 O ARG A 90 N VAL A 84 SHEET 4 A 7 VAL A 14 GLU A 20 1 N VAL A 14 O VAL A 93 SHEET 5 A 7 LEU A 122 GLY A 131 1 O VAL A 124 N MSE A 15 SHEET 6 A 7 ALA A 182 PRO A 190 1 O VAL A 189 N LEU A 129 SHEET 7 A 7 VAL A 141 THR A 145 -1 N SER A 142 O TRP A 186 SHEET 1 B 2 THR A 62 ASP A 66 0 SHEET 2 B 2 VAL A 69 THR A 73 -1 O VAL A 69 N ASP A 66 LINK C VAL A 14 N MSE A 15 1555 1555 1.33 LINK C MSE A 15 N VAL A 16 1555 1555 1.32 LINK C SER A 101 N MSE A 102 1555 1555 1.33 LINK C MSE A 102 N ARG A 103 1555 1555 1.33 LINK C MSE A 154 N ASP A 155 1555 1555 1.33 LINK C THR A 153 N MSE A 154 1555 1555 1.34 CISPEP 1 VAL A 84 GLY A 85 0 -2.50 SITE 1 AC1 2 ARG A 70 THR A 165 CRYST1 143.943 143.943 81.121 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006947 0.004011 0.000000 0.00000 SCALE2 0.000000 0.008022 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012327 0.00000