HEADER ISOMERASE/RNA BINDING PROTEIN/RNA 28-APR-10 3MQK TITLE CBF5-NOP10-GAR1 COMPLEX BINDING WITH 17MER RNA CONTAINING ACA TITLE 2 TRINUCLEOTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRNA PSEUDOURIDINE SYNTHASE B; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 8-335; COMPND 5 SYNONYM: TRNA PSEUDOURIDINE 55 SYNTHASE, PSI55 SYNTHASE, TRNA-URIDINE COMPND 6 ISOMERASE, TRNA PSEUDOURIDYLATE SYNTHASE; COMPND 7 EC: 5.4.99.-; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: RIBOSOME BIOGENESIS PROTEIN NOP10; COMPND 11 CHAIN: B; COMPND 12 FRAGMENT: UNP RESIDUES 4-55; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: SMALL NUCLEOLAR RNP GAR1-LIKE PROTEIN; COMPND 16 CHAIN: C; COMPND 17 FRAGMENT: UNP RESIDUES 8-82; COMPND 18 ENGINEERED: YES; COMPND 19 MOL_ID: 4; COMPND 20 MOLECULE: RNA (5'-R(P*GP*UP*UP*CP*GP*AP*UP*CP*CP*AP*CP*AP*G)-3'); COMPND 21 CHAIN: D; COMPND 22 ENGINEERED: YES; COMPND 23 MOL_ID: 5; COMPND 24 MOLECULE: RNA (5'-R(P*CP*GP*AP*UP*CP*CP*AP*CP*A)-3'); COMPND 25 CHAIN: E; COMPND 26 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS FURIOSUS; SOURCE 3 ORGANISM_TAXID: 2261; SOURCE 4 GENE: TRUB, PF1785; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: PYROCOCCUS FURIOSUS; SOURCE 9 ORGANISM_TAXID: 2261; SOURCE 10 GENE: PF1141; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: PYROCOCCUS FURIOSUS; SOURCE 15 ORGANISM_TAXID: 2261; SOURCE 16 GENE: PF1791; SOURCE 17 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 19 MOL_ID: 4; SOURCE 20 SYNTHETIC: YES; SOURCE 21 MOL_ID: 5; SOURCE 22 SYNTHETIC: YES KEYWDS PROTEIN-RNA COMPLEX, BOX H/ACA, PSEUDOURIDINE SYNTHASE, POST- KEYWDS 2 TRANSCRIPTIONAL MODIFICATION, ISOMERASE, TRNA PROCESSING, RNA- KEYWDS 3 BINDING, ISOMERASE-RNA BINDING PROTEIN-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.ZHOU,B.LIANG,H.LI REVDAT 3 06-SEP-23 3MQK 1 SSBOND REVDAT 2 02-FEB-11 3MQK 1 JRNL REVDAT 1 29-DEC-10 3MQK 0 JRNL AUTH J.ZHOU,B.LIANG,H.LI JRNL TITL STRUCTURAL AND FUNCTIONAL EVIDENCE OF HIGH SPECIFICITY OF JRNL TITL 2 CBF5 FOR ACA TRINUCLEOTIDE. JRNL REF RNA V. 17 244 2011 JRNL REFN ISSN 1355-8382 JRNL PMID 21149572 JRNL DOI 10.1261/RNA.2415811 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.38 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.120 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 3 NUMBER OF REFLECTIONS : 19905 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.740 REMARK 3 FREE R VALUE TEST SET COUNT : 1938 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.3808 - 6.7297 0.99 1487 156 0.1890 0.2114 REMARK 3 2 6.7297 - 5.3487 0.99 1386 132 0.1958 0.2674 REMARK 3 3 5.3487 - 4.6746 0.99 1344 145 0.1657 0.2227 REMARK 3 4 4.6746 - 4.2482 0.99 1320 140 0.1407 0.2276 REMARK 3 5 4.2482 - 3.9442 0.99 1326 136 0.1437 0.1897 REMARK 3 6 3.9442 - 3.7120 0.98 1308 139 0.1653 0.2324 REMARK 3 7 3.7120 - 3.5263 0.98 1258 149 0.1764 0.2309 REMARK 3 8 3.5263 - 3.3729 0.98 1308 128 0.1836 0.2717 REMARK 3 9 3.3729 - 3.2432 0.96 1278 125 0.1900 0.2551 REMARK 3 10 3.2432 - 3.1314 0.96 1257 125 0.1952 0.2809 REMARK 3 11 3.1314 - 3.0335 0.93 1200 138 0.2018 0.2710 REMARK 3 12 3.0335 - 2.9469 0.93 1188 150 0.1920 0.2856 REMARK 3 13 2.9469 - 2.8693 0.91 1166 138 0.2148 0.2997 REMARK 3 14 2.8693 - 2.8000 0.89 1141 137 0.2189 0.3004 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.31 REMARK 3 B_SOL : 51.50 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 2.550 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.55520 REMARK 3 B22 (A**2) : -3.55520 REMARK 3 B33 (A**2) : 7.11030 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4264 REMARK 3 ANGLE : 1.228 5856 REMARK 3 CHIRALITY : 0.077 667 REMARK 3 PLANARITY : 0.005 663 REMARK 3 DIHEDRAL : 21.066 1722 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -12.2349 35.5660 -8.2205 REMARK 3 T TENSOR REMARK 3 T11: 0.1983 T22: 0.2657 REMARK 3 T33: 0.2436 T12: -0.0928 REMARK 3 T13: -0.0153 T23: -0.1741 REMARK 3 L TENSOR REMARK 3 L11: 1.7596 L22: 1.2147 REMARK 3 L33: 1.2551 L12: -0.9998 REMARK 3 L13: -0.6276 L23: 0.6707 REMARK 3 S TENSOR REMARK 3 S11: -0.1127 S12: 0.0895 S13: -0.2148 REMARK 3 S21: -0.0320 S22: 0.0182 S23: 0.0709 REMARK 3 S31: 0.0377 S32: -0.1137 S33: 0.1127 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3MQK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-MAY-10. REMARK 100 THE DEPOSITION ID IS D_1000058875. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-DEC-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20726 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 20.60 REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 48.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 17.40 REMARK 200 R MERGE FOR SHELL (I) : 0.77800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2EY4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 120 MM MAGNESIUM ACETATE TETRAHYDRATE, REMARK 280 50 MM MES PH 5.6, 20% 2-METHYL-2,4-PENTANEDIOL, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 303K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 162.61667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 81.30833 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 121.96250 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 40.65417 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 203.27083 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 162.61667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 81.30833 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 40.65417 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 121.96250 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 203.27083 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 204 OE1 GLU A 213 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 G D 5 C3' - C2' - C1' ANGL. DEV. = 4.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 16 -16.63 -43.02 REMARK 500 PHE A 36 104.71 -164.17 REMARK 500 LYS A 40 51.31 -93.67 REMARK 500 GLU A 97 -122.23 49.38 REMARK 500 GLN A 141 -78.71 -95.69 REMARK 500 ARG A 146 115.36 -24.61 REMARK 500 LYS A 150 109.08 -55.04 REMARK 500 LYS B 10 -61.56 -95.71 REMARK 500 CYS B 20 112.63 -37.04 REMARK 500 ASN C 27 10.29 82.76 REMARK 500 LEU C 35 13.43 89.09 REMARK 500 LYS C 58 32.20 -92.77 REMARK 500 GLU C 63 -5.44 -55.10 REMARK 500 REMARK 500 REMARK: NULL DBREF 3MQK A 11 338 UNP Q7LWY0 TRUB_PYRFU 8 335 DBREF 3MQK B 4 55 UNP Q8U1R4 NOP10_PYRFU 4 55 DBREF 3MQK C 1 75 UNP Q8U029 Q8U029_PYRFU 8 82 DBREF 3MQK D 5 17 PDB 3MQK 3MQK 5 17 DBREF 3MQK E 8 16 PDB 3MQK 3MQK 8 16 SEQRES 1 A 328 ARG ILE LEU PRO ALA ASP ILE LYS ARG GLU VAL LEU ILE SEQRES 2 A 328 LYS ASP GLU ASN ALA GLU THR ASN PRO ASP TRP GLY PHE SEQRES 3 A 328 PRO PRO GLU LYS ARG PRO ILE GLU MET HIS ILE GLN PHE SEQRES 4 A 328 GLY VAL ILE ASN LEU ASP LYS PRO PRO GLY PRO THR SER SEQRES 5 A 328 HIS GLU VAL VAL ALA TRP ILE LYS LYS ILE LEU ASN LEU SEQRES 6 A 328 GLU LYS ALA GLY HIS GLY GLY THR LEU ASP PRO LYS VAL SEQRES 7 A 328 SER GLY VAL LEU PRO VAL ALA LEU GLU LYS ALA THR ARG SEQRES 8 A 328 VAL VAL GLN ALA LEU LEU PRO ALA GLY LYS GLU TYR VAL SEQRES 9 A 328 ALA LEU MET HIS LEU HIS GLY ASP VAL PRO GLU ASP LYS SEQRES 10 A 328 ILE ILE GLN VAL MET LYS GLU PHE GLU GLY GLU ILE ILE SEQRES 11 A 328 GLN ARG PRO PRO LEU ARG SER ALA VAL LYS ARG ARG LEU SEQRES 12 A 328 ARG THR ARG LYS VAL TYR TYR ILE GLU VAL LEU GLU ILE SEQRES 13 A 328 GLU GLY ARG ASP VAL LEU PHE ARG VAL GLY VAL GLU ALA SEQRES 14 A 328 GLY THR TYR ILE ARG SER LEU ILE HIS HIS ILE GLY LEU SEQRES 15 A 328 ALA LEU GLY VAL GLY ALA HIS MET SER GLU LEU ARG ARG SEQRES 16 A 328 THR ARG SER GLY PRO PHE LYS GLU ASP GLU THR LEU ILE SEQRES 17 A 328 THR LEU HIS ASP LEU VAL ASP TYR TYR TYR PHE TRP LYS SEQRES 18 A 328 GLU ASP GLY ILE GLU GLU TYR PHE ARG LYS ALA ILE GLN SEQRES 19 A 328 PRO MET GLU LYS ALA VAL GLU HIS LEU PRO LYS VAL TRP SEQRES 20 A 328 ILE LYS ASP SER ALA VAL ALA ALA VAL THR HIS GLY ALA SEQRES 21 A 328 ASP LEU ALA VAL PRO GLY ILE ALA LYS LEU HIS ALA GLY SEQRES 22 A 328 ILE LYS ARG GLY ASP LEU VAL ALA ILE MET THR LEU LYS SEQRES 23 A 328 ASP GLU LEU VAL ALA LEU GLY LYS ALA MET MET THR SER SEQRES 24 A 328 GLN GLU MET LEU GLU LYS THR LYS GLY ILE ALA VAL ASP SEQRES 25 A 328 VAL GLU LYS VAL PHE MET PRO ARG ASP TRP TYR PRO LYS SEQRES 26 A 328 LEU TRP GLU SEQRES 1 B 52 ARG ILE ARG LYS CYS PRO LYS CYS GLY ARG TYR THR LEU SEQRES 2 B 52 LYS GLU VAL CYS PRO VAL CYS GLY GLU LYS THR LYS VAL SEQRES 3 B 52 ALA HIS PRO PRO ARG PHE SER PRO GLU ASP PRO TYR GLY SEQRES 4 B 52 GLU TYR ARG ARG ARG TRP LYS ARG GLU VAL LEU GLY ILE SEQRES 1 C 75 MET LYS ARG LEU GLY LYS VAL LEU HIS TYR ALA LYS GLN SEQRES 2 C 75 GLY PHE LEU ILE VAL ARG THR ASN TRP VAL PRO SER LEU SEQRES 3 C 75 ASN ASP ARG VAL VAL ASP LYS ARG LEU GLN PHE VAL GLY SEQRES 4 C 75 ILE VAL LYS ASP VAL PHE GLY PRO VAL LYS MET PRO TYR SEQRES 5 C 75 VAL ALA ILE LYS PRO LYS VAL SER ASN PRO GLU ILE TYR SEQRES 6 C 75 VAL GLY GLU VAL LEU TYR VAL ASP GLU ARG SEQRES 1 D 13 G U U C G A U C C A C A G SEQRES 1 E 9 C G A U C C A C A HELIX 1 1 PRO A 42 PHE A 49 1 8 HELIX 2 2 THR A 61 ASN A 74 1 14 HELIX 3 3 LYS A 98 LEU A 106 5 9 HELIX 4 4 PRO A 124 PHE A 135 1 12 HELIX 5 5 TYR A 182 LEU A 194 1 13 HELIX 6 6 THR A 219 GLU A 232 1 14 HELIX 7 7 GLU A 236 ALA A 242 1 7 HELIX 8 8 GLU A 247 GLU A 251 5 5 HELIX 9 9 LYS A 259 HIS A 268 1 10 HELIX 10 10 THR A 308 LYS A 315 1 8 HELIX 11 11 TYR B 41 ARG B 50 1 10 SHEET 1 A 7 VAL A 21 ILE A 23 0 SHEET 2 A 7 ILE A 277 HIS A 281 -1 O LEU A 280 N LEU A 22 SHEET 3 A 7 LYS A 255 ILE A 258 -1 N TRP A 257 O LYS A 279 SHEET 4 A 7 LEU A 289 MET A 293 1 O MET A 293 N VAL A 256 SHEET 5 A 7 LEU A 299 ALA A 305 -1 O ALA A 301 N ILE A 292 SHEET 6 A 7 ILE A 319 VAL A 326 -1 O ASP A 322 N LYS A 304 SHEET 7 A 7 LEU A 272 ALA A 273 -1 N LEU A 272 O ALA A 320 SHEET 1 B 5 ILE A 243 PRO A 245 0 SHEET 2 B 5 GLY A 50 LYS A 56 -1 N VAL A 51 O GLN A 244 SHEET 3 B 5 SER A 89 LEU A 96 -1 O LEU A 92 N LEU A 54 SHEET 4 B 5 ALA A 198 SER A 208 1 O ARG A 205 N SER A 89 SHEET 5 B 5 PHE A 211 LYS A 212 -1 O PHE A 211 N SER A 208 SHEET 1 C14 ILE A 243 PRO A 245 0 SHEET 2 C14 GLY A 50 LYS A 56 -1 N VAL A 51 O GLN A 244 SHEET 3 C14 SER A 89 LEU A 96 -1 O LEU A 92 N LEU A 54 SHEET 4 C14 ALA A 198 SER A 208 1 O ARG A 205 N SER A 89 SHEET 5 C14 LYS A 111 LEU A 119 -1 N GLU A 112 O THR A 206 SHEET 6 C14 ASP A 170 VAL A 177 -1 O VAL A 171 N MET A 117 SHEET 7 C14 THR A 155 GLU A 167 -1 N GLU A 162 O ARG A 174 SHEET 8 C14 GLY A 137 ILE A 140 -1 N ILE A 139 O ARG A 156 SHEET 9 C14 PHE C 37 PRO C 47 -1 O GLY C 46 N ILE A 140 SHEET 10 C14 TYR C 52 PRO C 57 -1 O TYR C 52 N PHE C 45 SHEET 11 C14 PHE C 15 ARG C 19 -1 N LEU C 16 O ILE C 55 SHEET 12 C14 LYS C 2 ALA C 11 -1 N ALA C 11 O PHE C 15 SHEET 13 C14 VAL C 69 VAL C 72 -1 O VAL C 72 N LYS C 2 SHEET 14 C14 ARG C 29 VAL C 31 -1 N VAL C 31 O TYR C 71 SHEET 1 D13 ALA A 78 HIS A 80 0 SHEET 2 D13 SER A 89 LEU A 96 -1 O ALA A 95 N GLY A 79 SHEET 3 D13 ALA A 198 SER A 208 1 O ARG A 205 N SER A 89 SHEET 4 D13 LYS A 111 LEU A 119 -1 N GLU A 112 O THR A 206 SHEET 5 D13 ASP A 170 VAL A 177 -1 O VAL A 171 N MET A 117 SHEET 6 D13 THR A 155 GLU A 167 -1 N GLU A 162 O ARG A 174 SHEET 7 D13 GLY A 137 ILE A 140 -1 N ILE A 139 O ARG A 156 SHEET 8 D13 PHE C 37 PRO C 47 -1 O GLY C 46 N ILE A 140 SHEET 9 D13 ARG C 29 VAL C 31 -1 N VAL C 30 O VAL C 38 SHEET 10 D13 VAL C 69 VAL C 72 -1 O TYR C 71 N VAL C 31 SHEET 11 D13 LYS C 2 ALA C 11 -1 N LYS C 2 O VAL C 72 SHEET 12 D13 PHE C 15 ARG C 19 -1 O PHE C 15 N ALA C 11 SHEET 13 D13 TYR C 52 PRO C 57 -1 O ILE C 55 N LEU C 16 SHEET 1 E 3 TYR B 14 THR B 15 0 SHEET 2 E 3 ARG B 6 LYS B 7 -1 N ARG B 6 O THR B 15 SHEET 3 E 3 LYS B 28 VAL B 29 -1 O LYS B 28 N LYS B 7 SSBOND 1 CYS B 8 CYS B 11 1555 1555 2.04 SSBOND 2 CYS B 8 CYS B 20 1555 1555 2.04 SSBOND 3 CYS B 8 CYS B 23 1555 1555 2.03 SSBOND 4 CYS B 11 CYS B 20 1555 1555 2.05 SSBOND 5 CYS B 11 CYS B 23 1555 1555 2.02 SSBOND 6 CYS B 20 CYS B 23 1555 1555 2.04 CRYST1 105.696 105.696 243.925 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009461 0.005462 0.000000 0.00000 SCALE2 0.000000 0.010925 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004100 0.00000