HEADER HYDROLASE 30-APR-10 3MTV TITLE THE CRYSTAL STRUCTURE OF THE PRRSV NONSTRUCTURAL PROTEIN NSP1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PAPAIN-LIKE CYSTEINE PROTEASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 181-383; COMPND 5 SYNONYM: NSP1B; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PORCINE REPRODUCTIVE AND RESPIRATORY SYNDROME SOURCE 3 VIRUS; SOURCE 4 ORGANISM_COMMON: PRRSV; SOURCE 5 ORGANISM_TAXID: 28344; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX-6P-1 KEYWDS PRRSV, NSP1, NUCLEASE, PAPAIN-LIKE CYSTEINE PROTEASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR F.XUE,Y.N.SUN,L.M.YAN,C.ZHAO,Z.Y.LOU,Z.H.RAO REVDAT 3 20-MAR-24 3MTV 1 REMARK REVDAT 2 21-JUL-10 3MTV 1 JRNL REVDAT 1 19-MAY-10 3MTV 0 JRNL AUTH F.XUE,Y.N.SUN,L.M.YAN,C.ZHAO,J.CHEN,M.BARTLAM,X.M.LI, JRNL AUTH 2 Z.Y.LOU,Z.H.RAO JRNL TITL THE CRYSTAL STRUCTURE OF PORCINE REPRODUCTIVE AND JRNL TITL 2 RESPIRATORY SYNDROME VIRUS NONSTRUCTURAL PROTEIN NSP1BETA JRNL TITL 3 REVEALS A NOVEL METAL-DEPENDENT NUCLEASE JRNL REF J.VIROL. V. 84 6461 2010 JRNL REFN ISSN 0022-538X JRNL PMID 20410261 JRNL DOI 10.1128/JVI.00301-10 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.1_357) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.91 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.220 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 10604 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.770 REMARK 3 FREE R VALUE TEST SET COUNT : 506 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.9079 - 4.4418 1.00 2695 138 0.1814 0.2179 REMARK 3 2 4.4418 - 3.5270 1.00 2549 135 0.1804 0.2612 REMARK 3 3 3.5270 - 3.0816 0.98 2492 122 0.2280 0.3036 REMARK 3 4 3.0816 - 2.8000 0.93 2362 111 0.2668 0.3572 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.29 REMARK 3 B_SOL : 39.13 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.520 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.470 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 74.95 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 68.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.47300 REMARK 3 B22 (A**2) : 3.47300 REMARK 3 B33 (A**2) : -6.94610 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.038 1683 REMARK 3 ANGLE : 3.426 2285 REMARK 3 CHIRALITY : 0.188 236 REMARK 3 PLANARITY : 0.018 296 REMARK 3 DIHEDRAL : 21.951 625 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3MTV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-MAY-10. REMARK 100 THE DEPOSITION ID IS D_1000058988. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAR-09; 15-MAR-09 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY; PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A; BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000; 0.9798, 0.9795, 0.960 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL; SI 111 CHANNEL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315; ADSC QUANTUM REMARK 200 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12021 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 31.910 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 18.10 REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 11.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.42100 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM HEPES (PH 7.0), VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291K, PH 6.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.84250 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 50.44750 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 50.44750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 20.42125 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 50.44750 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 50.44750 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 61.26375 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 50.44750 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 50.44750 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 20.42125 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 50.44750 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 50.44750 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 61.26375 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 40.84250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 81.68500 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLY A 203 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLY A 26 C GLY A 26 O 0.098 REMARK 500 GLU A 32 CD GLU A 32 OE1 0.092 REMARK 500 GLU A 32 CD GLU A 32 OE2 0.092 REMARK 500 THR A 61 CB THR A 61 CG2 0.208 REMARK 500 TYR A 75 CD1 TYR A 75 CE1 0.115 REMARK 500 ALA A 82 CA ALA A 82 CB -0.126 REMARK 500 CYS A 90 CB CYS A 90 SG 0.110 REMARK 500 TYR A 104 CE2 TYR A 104 CD2 0.115 REMARK 500 LYS A 105 CB LYS A 105 CG 0.164 REMARK 500 PHE A 113 CE2 PHE A 113 CD2 0.123 REMARK 500 TYR A 115 CE1 TYR A 115 CZ 0.084 REMARK 500 THR A 117 CB THR A 117 CG2 0.214 REMARK 500 VAL A 132 CB VAL A 132 CG2 -0.127 REMARK 500 GLU A 172 CD GLU A 172 OE2 0.076 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 VAL A 14 CB - CA - C ANGL. DEV. = -13.3 DEGREES REMARK 500 ARG A 24 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 ARG A 24 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 PRO A 33 C - N - CA ANGL. DEV. = -11.2 DEGREES REMARK 500 PRO A 35 C - N - CA ANGL. DEV. = 18.7 DEGREES REMARK 500 PRO A 35 C - N - CD ANGL. DEV. = -19.1 DEGREES REMARK 500 LEU A 40 CA - CB - CG ANGL. DEV. = -13.8 DEGREES REMARK 500 ARG A 44 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 CYS A 79 CA - CB - SG ANGL. DEV. = 11.2 DEGREES REMARK 500 PRO A 81 C - N - CD ANGL. DEV. = -14.6 DEGREES REMARK 500 PRO A 100 C - N - CA ANGL. DEV. = 9.9 DEGREES REMARK 500 TYR A 115 CB - CG - CD2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG A 128 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 LEU A 130 CB - CG - CD1 ANGL. DEV. = 12.3 DEGREES REMARK 500 VAL A 132 CB - CA - C ANGL. DEV. = -16.0 DEGREES REMARK 500 VAL A 132 CG1 - CB - CG2 ANGL. DEV. = -13.6 DEGREES REMARK 500 PRO A 144 C - N - CA ANGL. DEV. = 20.6 DEGREES REMARK 500 PRO A 144 C - N - CD ANGL. DEV. = -20.7 DEGREES REMARK 500 VAL A 152 CG1 - CB - CG2 ANGL. DEV. = -10.2 DEGREES REMARK 500 ARG A 158 NE - CZ - NH1 ANGL. DEV. = 4.9 DEGREES REMARK 500 LEU A 160 CA - CB - CG ANGL. DEV. = -16.1 DEGREES REMARK 500 ASP A 173 CB - CG - OD1 ANGL. DEV. = -5.7 DEGREES REMARK 500 ASP A 173 CB - CG - OD2 ANGL. DEV. = 6.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 8 44.23 37.54 REMARK 500 ALA A 15 117.31 174.52 REMARK 500 PRO A 35 10.82 -52.05 REMARK 500 LYS A 36 -41.82 60.82 REMARK 500 GLU A 37 -2.26 -52.61 REMARK 500 LEU A 38 -4.37 -143.70 REMARK 500 LEU A 40 -78.68 -74.68 REMARK 500 VAL A 41 -41.92 -19.13 REMARK 500 ALA A 42 -79.74 -60.22 REMARK 500 ASN A 43 -46.79 -26.46 REMARK 500 ARG A 44 -81.00 -59.39 REMARK 500 LEU A 45 -66.55 -16.17 REMARK 500 HIS A 52 0.76 89.88 REMARK 500 PRO A 65 127.88 -30.98 REMARK 500 CYS A 79 28.04 -163.98 REMARK 500 ASP A 83 -22.65 -32.87 REMARK 500 PHE A 113 -161.69 -71.41 REMARK 500 TYR A 115 -32.72 23.41 REMARK 500 LEU A 130 -76.84 75.93 REMARK 500 GLN A 131 -58.67 -28.51 REMARK 500 THR A 141 -8.69 -41.95 REMARK 500 SER A 151 -41.65 82.11 REMARK 500 LEU A 174 -70.39 -94.97 REMARK 500 ASN A 182 53.95 -100.59 REMARK 500 LYS A 189 -15.60 -168.06 REMARK 500 PHE A 196 4.99 -43.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 74 TYR A 75 -147.49 REMARK 500 LYS A 189 ASP A 190 145.27 REMARK 500 REMARK 500 REMARK: NULL DBREF 3MTV A 1 203 UNP B2ZAB4 B2ZAB4_PRRSV 181 383 SEQRES 1 A 203 ALA ASP VAL TYR ASP ILE GLY ARG GLY ALA VAL MET TYR SEQRES 2 A 203 VAL ALA GLY GLY LYS VAL SER TRP ALA PRO ARG GLY GLY SEQRES 3 A 203 ASN GLU VAL LYS PHE GLU PRO VAL PRO LYS GLU LEU LYS SEQRES 4 A 203 LEU VAL ALA ASN ARG LEU HIS THR SER PHE PRO PRO HIS SEQRES 5 A 203 HIS VAL VAL ASP MET SER LYS PHE THR PHE ILE THR PRO SEQRES 6 A 203 GLY SER GLY VAL SER MET ARG VAL GLU TYR GLN TYR GLY SEQRES 7 A 203 CYS LEU PRO ALA ASP THR VAL PRO GLU GLY ASN CYS TRP SEQRES 8 A 203 TRP ARG LEU LEU ASP SER LEU PRO PRO GLU VAL GLN TYR SEQRES 9 A 203 LYS GLU ILE ARG HIS ALA ASN GLN PHE GLY TYR GLN THR SEQRES 10 A 203 LYS HIS GLY VAL PRO GLY LYS TYR LEU GLN ARG ARG LEU SEQRES 11 A 203 GLN VAL ASN GLY LEU ARG ALA VAL THR ASP THR HIS GLY SEQRES 12 A 203 PRO ILE VAL ILE GLN TYR PHE SER VAL LYS GLU SER TRP SEQRES 13 A 203 ILE ARG HIS LEU LYS LEU VAL GLU GLU PRO SER LEU PRO SEQRES 14 A 203 GLY PHE GLU ASP LEU LEU ARG ILE ARG VAL GLU PRO ASN SEQRES 15 A 203 THR SER PRO LEU ALA GLY LYS ASP GLU LYS ILE PHE ARG SEQRES 16 A 203 PHE GLY SER HIS LYS TRP TYR GLY FORMUL 2 HOH *20(H2 O) HELIX 1 1 LEU A 38 PHE A 49 1 12 HELIX 2 2 SER A 58 PHE A 60 5 3 HELIX 3 3 PRO A 81 VAL A 85 5 5 HELIX 4 4 TRP A 91 ASP A 96 5 6 HELIX 5 5 PRO A 99 PHE A 113 1 15 HELIX 6 6 GLY A 123 VAL A 132 1 10 SHEET 1 A 4 VAL A 3 GLY A 7 0 SHEET 2 A 4 ALA A 10 ALA A 15 -1 O ALA A 10 N GLY A 7 SHEET 3 A 4 LYS A 18 PRO A 23 -1 O ALA A 22 N VAL A 11 SHEET 4 A 4 VAL A 54 ASP A 56 -1 O VAL A 55 N VAL A 19 SHEET 1 B 2 GLY A 68 VAL A 69 0 SHEET 2 B 2 TYR A 77 GLY A 78 -1 O GLY A 78 N GLY A 68 SHEET 1 C 5 ARG A 158 LEU A 162 0 SHEET 2 C 5 ILE A 145 PHE A 150 -1 N GLN A 148 O HIS A 159 SHEET 3 C 5 PHE A 171 PRO A 181 -1 O LEU A 175 N ILE A 147 SHEET 4 C 5 LEU A 135 THR A 139 -1 N ARG A 136 O GLU A 180 SHEET 5 C 5 LYS A 192 ILE A 193 -1 O LYS A 192 N THR A 139 CRYST1 100.895 100.895 81.685 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009911 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009911 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012242 0.00000