HEADER IMMUNE SYSTEM 03-MAY-10 3MV9 TITLE CRYSTAL STRUCTURE OF THE TK3-GLN55ALA TCR IN COMPLEX WITH HLA- TITLE 2 B*3501/HPVG COMPND MOL_ID: 1; COMPND 2 MOLECULE: HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, B-35 ALPHA CHAIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: EXTRACELLULAR DOMAIN; COMPND 5 SYNONYM: HLA B*3501 HEAVY CHAIN, MHC CLASS I ANTIGEN B*35; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: BETA-2-MICROGLOBULIN FORM PI 5.3; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: HPVG PEPTIDE FROM EPSTEIN-BARR NUCLEAR ANTIGEN 1; COMPND 14 CHAIN: C; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: ALPHA CHAIN OF THE TK3 TCR; COMPND 18 CHAIN: D; COMPND 19 ENGINEERED: YES; COMPND 20 MOL_ID: 5; COMPND 21 MOLECULE: BETA CHAIN OF THE TK3 TCR; COMPND 22 CHAIN: E; COMPND 23 ENGINEERED: YES; COMPND 24 OTHER_DETAILS: Q55A MUTANT SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HLA-B, HLAB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: B2M, CDABP0092, HDCMA22P; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET; SOURCE 21 MOL_ID: 3; SOURCE 22 SYNTHETIC: YES; SOURCE 23 OTHER_DETAILS: SYNTHETIC PEPTIDE; SOURCE 24 MOL_ID: 4; SOURCE 25 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 26 ORGANISM_COMMON: HUMAN; SOURCE 27 ORGANISM_TAXID: 9606; SOURCE 28 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 29 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 30 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 31 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 32 EXPRESSION_SYSTEM_PLASMID: PET; SOURCE 33 MOL_ID: 5; SOURCE 34 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 35 ORGANISM_COMMON: HUMAN; SOURCE 36 ORGANISM_TAXID: 9606; SOURCE 37 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 38 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 39 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 40 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 41 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS HLA B*3501, EBV, TCR, TCRPMHC COMPLEX, HPVG, TCR POLYMORPHISM, IMMUNE KEYWDS 2 SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR S.GRAS,Z.CHEN,J.J.MILES,Y.C.LIU,M.J.BELL,L.C.SULLIVAN,L.KJER-NIELSEN, AUTHOR 2 R.M.BRENNAN,J.M.BURROWS,M.A.NELLER,R.KHANNA,A.W.PURCELL,A.G.BROOKS, AUTHOR 3 J.MCCLUSKEY,J.ROSSJOHN,S.R.BURROWS REVDAT 2 20-JUL-11 3MV9 1 JRNL REVDAT 1 09-JUN-10 3MV9 0 JRNL AUTH S.GRAS,Z.CHEN,J.J.MILES,Y.C.LIU,M.J.BELL,L.C.SULLIVAN, JRNL AUTH 2 L.KJER-NIELSEN,R.M.BRENNAN,J.M.BURROWS,M.A.NELLER,R.KHANNA, JRNL AUTH 3 A.W.PURCELL,A.G.BROOKS,J.MCCLUSKEY,J.ROSSJOHN,S.R.BURROWS JRNL TITL ALLELIC POLYMORPHISM IN THE T CELL RECEPTOR AND ITS IMPACT JRNL TITL 2 ON IMMUNE RESPONSES JRNL REF J.EXP.MED. V. 207 1555 2010 JRNL REFN ISSN 0022-1007 JRNL PMID 20566715 JRNL DOI 10.1084/JEM.20100603 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.4_4) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.25 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.020 REMARK 3 COMPLETENESS FOR RANGE (%) : 83.7 REMARK 3 NUMBER OF REFLECTIONS : 22529 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.238 REMARK 3 R VALUE (WORKING SET) : 0.234 REMARK 3 FREE R VALUE : 0.331 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1131 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.2520 - 5.3960 0.98 3126 168 0.1740 0.2410 REMARK 3 2 5.3960 - 4.2840 0.97 3091 164 0.1570 0.2430 REMARK 3 3 4.2840 - 3.7430 0.84 2669 148 0.2190 0.3160 REMARK 3 4 3.7430 - 3.4010 0.68 2178 121 0.3180 0.4460 REMARK 3 5 3.4010 - 3.1580 0.82 2625 126 0.2640 0.3540 REMARK 3 6 3.1580 - 2.9710 0.85 2713 151 0.2560 0.3890 REMARK 3 7 2.9710 - 2.8230 0.81 2579 136 0.2680 0.3550 REMARK 3 8 2.8230 - 2.7000 0.75 2417 117 0.2810 0.4450 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.28 REMARK 3 B_SOL : 32.72 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.480 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.860 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 47.53 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.26200 REMARK 3 B22 (A**2) : -12.16100 REMARK 3 B33 (A**2) : 10.89900 REMARK 3 B12 (A**2) : 0.23700 REMARK 3 B13 (A**2) : -3.53700 REMARK 3 B23 (A**2) : -5.36500 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 6864 REMARK 3 ANGLE : 1.121 9316 REMARK 3 CHIRALITY : 0.075 975 REMARK 3 PLANARITY : 0.004 1235 REMARK 3 DIHEDRAL : 19.161 2482 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3MV9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-MAY-10. REMARK 100 THE RCSB ID CODE IS RCSB059036. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-AUG-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979457 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25447 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.0400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.45900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: 2FYY, 3FFC REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15%PEG 3350, 0.2M LISO4, 0.1M NA- REMARK 280 CITRATE, PH 5.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS D 151 CB CYS D 201 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO D 8 C - N - CA ANGL. DEV. = -9.6 DEGREES REMARK 500 PRO E 240 C - N - CA ANGL. DEV. = 10.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 2 -58.70 -142.19 REMARK 500 PRO A 15 85.93 -27.34 REMARK 500 ARG A 17 65.80 -101.38 REMARK 500 ASP A 29 -95.79 59.95 REMARK 500 ALA A 40 166.18 169.08 REMARK 500 ASP A 114 74.00 -156.84 REMARK 500 TYR A 123 -83.41 -117.41 REMARK 500 SER A 131 -33.15 -139.73 REMARK 500 GLU A 177 -17.66 92.61 REMARK 500 ALA A 182 81.27 51.65 REMARK 500 HIS A 188 -167.84 -170.67 REMARK 500 GLU A 198 -161.95 56.88 REMARK 500 PRO A 210 -158.20 -77.83 REMARK 500 LEU A 215 -94.59 -105.32 REMARK 500 THR A 216 127.92 63.81 REMARK 500 ARG A 219 73.71 -114.61 REMARK 500 ASP A 220 78.01 57.77 REMARK 500 GLN A 224 -72.25 -85.11 REMARK 500 THR A 225 -50.36 78.87 REMARK 500 ASP A 238 51.23 -117.14 REMARK 500 ARG A 239 -32.98 74.58 REMARK 500 LYS A 243 147.08 -175.78 REMARK 500 GLU A 254 -87.85 67.14 REMARK 500 ARG A 256 43.01 -174.79 REMARK 500 HIS A 260 99.50 -68.05 REMARK 500 GLU A 264 3.47 -64.74 REMARK 500 ILE B 1 83.40 -60.95 REMARK 500 ILE B 35 -84.04 -121.88 REMARK 500 GLU B 36 109.72 80.31 REMARK 500 LEU B 39 69.06 -119.90 REMARK 500 LYS B 41 44.51 -106.89 REMARK 500 ASN B 42 -29.50 68.48 REMARK 500 ILE B 46 66.13 169.45 REMARK 500 SER D 7 -77.14 -83.21 REMARK 500 GLU D 15 124.85 -36.35 REMARK 500 SER D 19 144.40 177.77 REMARK 500 CYS D 23 116.76 -160.11 REMARK 500 ALA D 59 103.75 -44.70 REMARK 500 GLU D 68 -112.95 -6.71 REMARK 500 GLU D 70 -130.73 74.04 REMARK 500 THR D 84 -167.02 -122.98 REMARK 500 GLU D 86 169.44 176.79 REMARK 500 GLN D 107 -51.93 -120.68 REMARK 500 ASP D 108 120.84 87.14 REMARK 500 SER D 149 -71.25 57.78 REMARK 500 VAL D 150 125.94 54.99 REMARK 500 THR D 173 -177.32 -62.04 REMARK 500 LYS D 175 151.43 114.92 REMARK 500 ASP D 184 11.46 55.74 REMARK 500 SER D 189 151.90 174.15 REMARK 500 REMARK 500 THIS ENTRY HAS 75 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2FYY RELATED DB: PDB REMARK 900 RELATED ID: 3MV7 RELATED DB: PDB REMARK 900 RELATED ID: 3MV8 RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE DATABASE REFERENCE FOR CHAIN D, E REMARK 999 DO NOT CURRENTLY EXIST IN UNP DATABASE. REMARK 999 CHAIN D: TRAV20/TRAJ58 TCR ALPHA CHAIN REMARK 999 CHAIN E : TRBV9 WITH THE MUTATION Q55A, TRBJ2-2 TCR BETA CHAIN REMARK 999 THE ABOVE CODES ARE FROM IMGT DATABASES. DBREF 3MV9 A 1 276 UNP P30685 1B35_HUMAN 25 300 DBREF 3MV9 B 1 99 UNP P61769 B2MG_HUMAN 21 119 DBREF 3MV9 C 1 11 UNP P03211 EBNA1_EBVB9 407 417 DBREF 3MV9 D 3 218 PDB 3MV9 3MV9 3 218 DBREF 3MV9 E 1 254 PDB 3MV9 3MV9 1 254 SEQADV 3MV9 MET B 0 UNP P61769 INITIATING METHIONINE SEQRES 1 A 276 GLY SER HIS SER MET ARG TYR PHE TYR THR ALA MET SER SEQRES 2 A 276 ARG PRO GLY ARG GLY GLU PRO ARG PHE ILE ALA VAL GLY SEQRES 3 A 276 TYR VAL ASP ASP THR GLN PHE VAL ARG PHE ASP SER ASP SEQRES 4 A 276 ALA ALA SER PRO ARG THR GLU PRO ARG ALA PRO TRP ILE SEQRES 5 A 276 GLU GLN GLU GLY PRO GLU TYR TRP ASP ARG ASN THR GLN SEQRES 6 A 276 ILE PHE LYS THR ASN THR GLN THR TYR ARG GLU SER LEU SEQRES 7 A 276 ARG ASN LEU ARG GLY TYR TYR ASN GLN SER GLU ALA GLY SEQRES 8 A 276 SER HIS ILE ILE GLN ARG MET TYR GLY CYS ASP LEU GLY SEQRES 9 A 276 PRO ASP GLY ARG LEU LEU ARG GLY HIS ASP GLN SER ALA SEQRES 10 A 276 TYR ASP GLY LYS ASP TYR ILE ALA LEU ASN GLU ASP LEU SEQRES 11 A 276 SER SER TRP THR ALA ALA ASP THR ALA ALA GLN ILE THR SEQRES 12 A 276 GLN ARG LYS TRP GLU ALA ALA ARG VAL ALA GLU GLN LEU SEQRES 13 A 276 ARG ALA TYR LEU GLU GLY LEU CYS VAL GLU TRP LEU ARG SEQRES 14 A 276 ARG TYR LEU GLU ASN GLY LYS GLU THR LEU GLN ARG ALA SEQRES 15 A 276 ASP PRO PRO LYS THR HIS VAL THR HIS HIS PRO VAL SER SEQRES 16 A 276 ASP HIS GLU ALA THR LEU ARG CYS TRP ALA LEU GLY PHE SEQRES 17 A 276 TYR PRO ALA GLU ILE THR LEU THR TRP GLN ARG ASP GLY SEQRES 18 A 276 GLU ASP GLN THR GLN ASP THR GLU LEU VAL GLU THR ARG SEQRES 19 A 276 PRO ALA GLY ASP ARG THR PHE GLN LYS TRP ALA ALA VAL SEQRES 20 A 276 VAL VAL PRO SER GLY GLU GLU GLN ARG TYR THR CYS HIS SEQRES 21 A 276 VAL GLN HIS GLU GLY LEU PRO LYS PRO LEU THR LEU ARG SEQRES 22 A 276 TRP GLU PRO SEQRES 1 B 100 MET ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG SEQRES 2 B 100 HIS PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS SEQRES 3 B 100 TYR VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP SEQRES 4 B 100 LEU LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SEQRES 5 B 100 SER ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU SEQRES 6 B 100 LEU TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU SEQRES 7 B 100 TYR ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO SEQRES 8 B 100 LYS ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 C 11 HIS PRO VAL GLY GLU ALA ASP TYR PHE GLU TYR SEQRES 1 D 200 GLN VAL THR GLN SER PRO GLU ALA LEU ARG LEU GLN GLU SEQRES 2 D 200 GLY GLU SER SER SER LEU ASN CYS SER TYR THR VAL SER SEQRES 3 D 200 GLY LEU ARG GLY LEU PHE TRP TYR ARG GLN ASP PRO GLY SEQRES 4 D 200 LYS GLY PRO GLU PHE LEU PHE THR LEU TYR SER ALA GLY SEQRES 5 D 200 GLU GLU LYS GLU LYS GLU ARG LEU LYS ALA THR LEU THR SEQRES 6 D 200 LYS LYS GLU SER PHE LEU HIS ILE THR ALA PRO LYS PRO SEQRES 7 D 200 GLU ASP SER ALA THR TYR LEU CYS ALA VAL GLN ASP LEU SEQRES 8 D 200 GLY THR SER GLY SER ARG LEU THR PHE GLY GLU GLY THR SEQRES 9 D 200 GLN LEU THR VAL ASN PRO ASN ILE GLN ASN PRO ASP PRO SEQRES 10 D 200 ALA VAL TYR GLN LEU ARG ASP SER LYS SER SER ASP LYS SEQRES 11 D 200 SER VAL CYS LEU PHE THR ASP PHE ASP SER GLN THR ASN SEQRES 12 D 200 VAL SER GLN SER LYS ASP SER ASP VAL TYR ILE THR ASP SEQRES 13 D 200 LYS CYS VAL LEU ASP MET ARG SER MET ASP PHE LYS SER SEQRES 14 D 200 ASN SER ALA VAL ALA TRP SER ASN LYS SER ASP PHE ALA SEQRES 15 D 200 CYS ALA ASN ALA PHE ASN ASN SER ILE ILE PRO GLU ASP SEQRES 16 D 200 THR PHE PHE PRO SER SEQRES 1 E 241 ASP SER GLY VAL THR GLN THR PRO LYS HIS LEU ILE THR SEQRES 2 E 241 ALA THR GLY GLN ARG VAL THR LEU ARG CYS SER PRO ARG SEQRES 3 E 241 SER GLY ASP LEU SER VAL TYR TRP TYR GLN GLN SER LEU SEQRES 4 E 241 ASP GLN GLY LEU GLN PHE LEU ILE ALA TYR TYR ASN GLY SEQRES 5 E 241 GLU GLU ARG ALA LYS GLY ASN ILE LEU GLU ARG PHE SER SEQRES 6 E 241 ALA GLN GLN PHE PRO ASP LEU HIS SER GLU LEU ASN LEU SEQRES 7 E 241 SER SER LEU GLU LEU GLY ASP SER ALA LEU TYR PHE CYS SEQRES 8 E 241 ALA SER SER ALA ARG SER GLY GLU LEU PHE PHE GLY GLU SEQRES 9 E 241 GLY SER ARG LEU THR VAL LEU GLU ASP LEU LYS ASN VAL SEQRES 10 E 241 PHE PRO PRO GLU VAL ALA VAL PHE GLU PRO SER GLU ALA SEQRES 11 E 241 GLU ILE SER HIS THR GLN LYS ALA THR LEU VAL CYS LEU SEQRES 12 E 241 ALA THR GLY PHE TYR PRO ASP HIS VAL GLU LEU SER TRP SEQRES 13 E 241 TRP VAL ASN GLY LYS GLU VAL HIS SER GLY VAL CYS THR SEQRES 14 E 241 ASP PRO GLN PRO LEU LYS GLU GLN PRO ALA LEU ASN ASP SEQRES 15 E 241 SER ARG TYR ALA LEU SER SER ARG LEU ARG VAL SER ALA SEQRES 16 E 241 THR PHE TRP GLN ASN PRO ARG ASN HIS PHE ARG CYS GLN SEQRES 17 E 241 VAL GLN PHE TYR GLY LEU SER GLU ASN ASP GLU TRP THR SEQRES 18 E 241 GLN ASP ARG ALA LYS PRO VAL THR GLN ILE VAL SER ALA SEQRES 19 E 241 GLU ALA TRP GLY ARG ALA ASP HET SO4 D 1 5 HETNAM SO4 SULFATE ION FORMUL 6 SO4 O4 S 2- FORMUL 7 HOH *62(H2 O) HELIX 1 1 ALA A 49 GLU A 53 5 5 HELIX 2 2 GLY A 56 TYR A 85 1 30 HELIX 3 3 ASP A 137 ALA A 150 1 14 HELIX 4 4 ARG A 151 GLY A 162 1 12 HELIX 5 5 GLY A 162 GLY A 175 1 14 HELIX 6 6 LYS D 95 SER D 99 5 5 HELIX 7 7 ARG D 181 ASP D 184 5 4 HELIX 8 8 GLU E 95 SER E 99 5 5 HELIX 9 9 ASP E 126 VAL E 130 5 5 HELIX 10 10 SER E 141 GLN E 149 1 9 HELIX 11 11 ALA E 208 GLN E 212 1 5 SHEET 1 A 8 GLU A 46 PRO A 47 0 SHEET 2 A 8 THR A 31 ASP A 37 -1 N ARG A 35 O GLU A 46 SHEET 3 A 8 ARG A 21 VAL A 28 -1 N GLY A 26 O VAL A 34 SHEET 4 A 8 HIS A 3 SER A 13 -1 N ARG A 6 O TYR A 27 SHEET 5 A 8 HIS A 93 LEU A 103 -1 O LEU A 103 N HIS A 3 SHEET 6 A 8 LEU A 109 TYR A 118 -1 O LEU A 110 N ASP A 102 SHEET 7 A 8 ASP A 122 LEU A 126 -1 O TYR A 123 N SER A 116 SHEET 8 A 8 TRP A 133 ALA A 135 -1 O THR A 134 N ALA A 125 SHEET 1 B 4 LYS A 186 THR A 190 0 SHEET 2 B 4 LEU A 201 PHE A 208 -1 O TRP A 204 N HIS A 188 SHEET 3 B 4 PHE A 241 VAL A 247 -1 O VAL A 247 N LEU A 201 SHEET 4 B 4 GLU A 229 LEU A 230 -1 N GLU A 229 O ALA A 246 SHEET 1 C 4 LYS A 186 THR A 190 0 SHEET 2 C 4 LEU A 201 PHE A 208 -1 O TRP A 204 N HIS A 188 SHEET 3 C 4 PHE A 241 VAL A 247 -1 O VAL A 247 N LEU A 201 SHEET 4 C 4 ARG A 234 PRO A 235 -1 N ARG A 234 O GLN A 242 SHEET 1 D 4 VAL B 9 SER B 11 0 SHEET 2 D 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 D 4 PHE B 62 PHE B 70 -1 O LEU B 64 N VAL B 27 SHEET 4 D 4 GLU B 50 HIS B 51 -1 N GLU B 50 O TYR B 67 SHEET 1 E 4 VAL B 9 SER B 11 0 SHEET 2 E 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 E 4 PHE B 62 PHE B 70 -1 O LEU B 64 N VAL B 27 SHEET 4 E 4 SER B 55 PHE B 56 -1 N SER B 55 O TYR B 63 SHEET 1 F 3 VAL B 37 ASP B 38 0 SHEET 2 F 3 ALA B 79 VAL B 82 -1 O ARG B 81 N ASP B 38 SHEET 3 F 3 LYS B 91 LYS B 94 -1 O LYS B 91 N VAL B 82 SHEET 1 G 5 VAL D 4 THR D 5 0 SHEET 2 G 5 SER D 19 TYR D 25 -1 O SER D 24 N THR D 5 SHEET 3 G 5 GLU D 86 ILE D 91 -1 O ILE D 91 N SER D 19 SHEET 4 G 5 LEU D 79 LEU D 83 -1 N LYS D 80 O HIS D 90 SHEET 5 G 5 GLU D 66 LYS D 67 -1 N LYS D 67 O ALA D 81 SHEET 1 H 5 ALA D 10 GLN D 14 0 SHEET 2 H 5 THR D 122 ASN D 127 1 O ASN D 127 N LEU D 13 SHEET 3 H 5 ALA D 100 VAL D 106 -1 N TYR D 102 O THR D 122 SHEET 4 H 5 LEU D 39 GLN D 44 -1 N PHE D 40 O ALA D 105 SHEET 5 H 5 GLU D 51 LEU D 56 -1 O GLU D 51 N ARG D 43 SHEET 1 I 4 ALA D 10 GLN D 14 0 SHEET 2 I 4 THR D 122 ASN D 127 1 O ASN D 127 N LEU D 13 SHEET 3 I 4 ALA D 100 VAL D 106 -1 N TYR D 102 O THR D 122 SHEET 4 I 4 THR D 117 PHE D 118 -1 O THR D 117 N VAL D 106 SHEET 1 J 2 ALA D 136 GLN D 139 0 SHEET 2 J 2 CYS D 151 THR D 154 -1 O LEU D 152 N TYR D 138 SHEET 1 K 2 TYR D 171 ILE D 172 0 SHEET 2 K 2 ALA D 192 TRP D 193 -1 O TRP D 193 N TYR D 171 SHEET 1 L 2 LEU D 178 MET D 180 0 SHEET 2 L 2 PHE D 185 SER D 187 -1 O SER D 187 N LEU D 178 SHEET 1 M 6 HIS E 10 ALA E 14 0 SHEET 2 M 6 SER E 119 LEU E 124 1 O LEU E 124 N THR E 13 SHEET 3 M 6 ALA E 100 SER E 107 -1 N ALA E 100 O LEU E 121 SHEET 4 M 6 VAL E 39 GLN E 44 -1 N GLN E 44 O LEU E 101 SHEET 5 M 6 LEU E 50 TYR E 56 -1 O GLN E 51 N GLN E 43 SHEET 6 M 6 GLU E 61 LYS E 68 -1 O ARG E 66 N ALA E 55 SHEET 1 N 4 HIS E 10 ALA E 14 0 SHEET 2 N 4 SER E 119 LEU E 124 1 O LEU E 124 N THR E 13 SHEET 3 N 4 ALA E 100 SER E 107 -1 N ALA E 100 O LEU E 121 SHEET 4 N 4 LEU E 113 PHE E 115 -1 O PHE E 114 N SER E 106 SHEET 1 O 3 VAL E 19 CYS E 23 0 SHEET 2 O 3 SER E 87 LEU E 91 -1 O LEU E 91 N VAL E 19 SHEET 3 O 3 PHE E 76 GLN E 80 -1 N SER E 77 O ASN E 90 SHEET 1 P 4 GLU E 134 PHE E 138 0 SHEET 2 P 4 LYS E 150 PHE E 160 -1 O VAL E 154 N PHE E 138 SHEET 3 P 4 TYR E 198 SER E 207 -1 O VAL E 206 N ALA E 151 SHEET 4 P 4 VAL E 180 THR E 182 -1 N CYS E 181 O ARG E 203 SHEET 1 Q 4 GLU E 134 PHE E 138 0 SHEET 2 Q 4 LYS E 150 PHE E 160 -1 O VAL E 154 N PHE E 138 SHEET 3 Q 4 TYR E 198 SER E 207 -1 O VAL E 206 N ALA E 151 SHEET 4 Q 4 LEU E 187 LYS E 188 -1 N LEU E 187 O ALA E 199 SHEET 1 R 4 LYS E 174 GLU E 175 0 SHEET 2 R 4 VAL E 165 VAL E 171 -1 N VAL E 171 O LYS E 174 SHEET 3 R 4 HIS E 217 PHE E 224 -1 O GLN E 221 N SER E 168 SHEET 4 R 4 GLN E 243 TRP E 250 -1 O GLN E 243 N PHE E 224 SSBOND 1 CYS A 101 CYS A 164 1555 1555 2.03 SSBOND 2 CYS A 203 CYS A 259 1555 1555 2.04 SSBOND 3 CYS B 25 CYS B 80 1555 1555 2.04 SSBOND 4 CYS D 23 CYS D 104 1555 1555 2.02 SSBOND 5 CYS D 151 CYS D 201 1555 1555 2.03 SSBOND 6 CYS D 176 CYS E 181 1555 1555 2.03 SSBOND 7 CYS E 23 CYS E 104 1555 1555 2.02 SSBOND 8 CYS E 155 CYS E 220 1555 1555 2.03 CISPEP 1 ALA A 90 GLY A 91 0 -10.06 CISPEP 2 TYR A 209 PRO A 210 0 1.74 CISPEP 3 HIS B 31 PRO B 32 0 -2.07 CISPEP 4 GLU D 68 LYS D 69 0 -9.79 CISPEP 5 THR E 7 PRO E 8 0 0.68 CISPEP 6 GLY E 59 GLU E 60 0 -6.74 CISPEP 7 ALA E 108 ARG E 109 0 -9.15 CISPEP 8 SER E 110 GLY E 111 0 -10.37 CISPEP 9 TYR E 161 PRO E 162 0 -0.28 SITE 1 AC1 3 ARG A 17 LYS D 69 GLU D 70 CRYST1 44.900 62.570 98.140 92.04 102.29 109.18 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022272 0.007748 0.005775 0.00000 SCALE2 0.000000 0.016921 0.001946 0.00000 SCALE3 0.000000 0.000000 0.010497 0.00000