HEADER CELL ADHESION 04-MAY-10 3MVS TITLE STRUCTURE OF THE N-TERMINUS OF CADHERIN 23 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CADHERIN-23; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 24-233; COMPND 5 SYNONYM: OTOCADHERIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: CDH23; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PTXB1 KEYWDS CADHERIN, ADHESION, EXTRACELLULAR DOMAIN, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR P.CLARK,J.S.JOSEPH,A.R.KOLATKAR REVDAT 3 21-FEB-24 3MVS 1 REMARK LINK REVDAT 2 23-JUN-10 3MVS 1 JRNL REVDAT 1 09-JUN-10 3MVS 0 JRNL AUTH H.M.ELLEDGE,P.KAZMIERCZAK,P.CLARK,J.S.JOSEPH,A.KOLATKAR, JRNL AUTH 2 P.KUHN,U.MULLER JRNL TITL STRUCTURE OF THE N TERMINUS OF CADHERIN 23 REVEALS A NEW JRNL TITL 2 ADHESION MECHANISM FOR A SUBSET OF CADHERIN SUPERFAMILY JRNL TITL 3 MEMBERS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 107 10708 2010 JRNL REFN ISSN 0027-8424 JRNL PMID 20498078 JRNL DOI 10.1073/PNAS.1006284107 REMARK 2 REMARK 2 RESOLUTION. 1.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0088 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.0 REMARK 3 NUMBER OF REFLECTIONS : 77493 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4098 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.13 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4286 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 69.47 REMARK 3 BIN R VALUE (WORKING SET) : 0.2860 REMARK 3 BIN FREE R VALUE SET COUNT : 248 REMARK 3 BIN FREE R VALUE : 0.3080 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1610 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 94 REMARK 3 SOLVENT ATOMS : 279 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.46000 REMARK 3 B22 (A**2) : 0.88000 REMARK 3 B33 (A**2) : 0.05000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.66000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.035 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.023 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.075 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.958 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1785 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2430 ; 1.354 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 236 ; 6.303 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 81 ;40.120 ;25.679 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 255 ; 9.544 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;13.409 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 288 ; 0.095 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1356 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1094 ; 1.243 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1817 ; 1.946 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 691 ; 2.337 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 599 ; 3.322 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 1785 ; 1.245 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 286 ; 4.760 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 1754 ; 4.381 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3MVS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-MAY-10. REMARK 100 THE DEPOSITION ID IS D_1000059055. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JAN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95369 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 77493 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.100 REMARK 200 RESOLUTION RANGE LOW (A) : 23.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.0 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08000 REMARK 200 FOR THE DATA SET : 11.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 75.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.49000 REMARK 200 FOR SHELL : 1.510 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 NL OF 6.9 MG/ML PROTEIN IN 1 MM REMARK 280 CACL2, 50 MM TRIS-HCL, PH 8.5, 200 NL CRYSTALLANT (22.5% REMARK 280 ETHYLENE GLYCOL AND 0.2 M NDSB-201), VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 32.10400 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 49 CD OE1 OE2 REMARK 470 GLU A 50 CG CD OE1 OE2 REMARK 470 ARG A 53 CD NE CZ NH1 NH2 REMARK 470 ARG A 67 CZ NH1 NH2 REMARK 470 LYS A 75 CD CE NZ REMARK 470 LYS A 94 CD CE NZ REMARK 470 LYS A 189 CE NZ REMARK 470 ARG A 191 CD NE CZ NH1 NH2 REMARK 470 ASP A 210 CB CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 15 -95.42 -114.26 REMARK 500 THR A 30 -178.88 -171.95 REMARK 500 HIS A 87 -1.93 74.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 216 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 3 OD1 REMARK 620 2 ARG A 4 O 87.7 REMARK 620 3 ASP A 36 OD1 162.6 89.4 REMARK 620 4 ASP A 36 OD2 145.2 108.0 51.4 REMARK 620 5 ASP A 38 OD2 73.0 79.4 123.2 79.6 REMARK 620 6 ASP A 40 OD2 82.2 169.9 100.1 80.9 97.9 REMARK 620 7 ASP A 86 OD2 78.2 85.5 84.5 132.4 147.9 92.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 211 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 21 OE1 REMARK 620 2 ASP A 71 OD1 91.8 REMARK 620 3 GLU A 73 OE1 87.6 84.3 REMARK 620 4 ASP A 104 OD2 86.1 162.1 113.3 REMARK 620 5 ASP A 104 OD1 92.1 153.3 69.5 44.5 REMARK 620 6 HOH A 335 O 99.6 81.9 164.6 81.0 123.4 REMARK 620 7 HOH A 395 O 171.7 91.3 85.1 93.3 81.8 88.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 212 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 21 OE2 REMARK 620 2 GLU A 73 OE2 116.8 REMARK 620 3 GLU A 73 OE1 88.0 49.0 REMARK 620 4 ASP A 101 OD1 82.0 75.4 109.8 REMARK 620 5 VAL A 102 O 82.2 152.0 158.2 88.1 REMARK 620 6 ASP A 104 OD1 84.7 115.7 74.9 165.7 84.8 REMARK 620 7 ASP A 137 OD1 157.3 84.2 101.1 113.5 81.9 77.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 213 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 103 OD1 REMARK 620 2 ASN A 105 O 106.7 REMARK 620 3 ASP A 135 OD2 160.4 85.6 REMARK 620 4 ASP A 135 OD1 136.7 97.2 53.2 REMARK 620 5 ASP A 137 OD2 72.3 77.9 126.1 78.4 REMARK 620 6 GLY A 141 O 82.4 170.1 84.6 78.1 109.4 REMARK 620 7 ASP A 186 OD2 79.5 90.0 85.5 137.0 144.3 87.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 214 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 120 OE2 REMARK 620 2 GLU A 173 OE2 120.0 REMARK 620 3 GLU A 173 OE1 82.4 48.0 REMARK 620 4 ASP A 205 OD1 82.8 83.6 108.0 REMARK 620 5 MET A 206 O 80.4 155.4 156.3 86.0 REMARK 620 6 ASP A 208 OD1 87.4 110.8 81.3 165.4 81.7 REMARK 620 7 HOH A 486 O 155.3 83.4 121.7 93.1 75.0 91.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 215 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 120 OE1 REMARK 620 2 ASP A 171 OD1 90.4 REMARK 620 3 GLU A 173 OE1 84.3 81.3 REMARK 620 4 ASP A 208 OD2 82.9 163.8 112.4 REMARK 620 5 HOH A 338 O 165.4 95.4 83.3 94.7 REMARK 620 6 HOH A 485 O 82.6 81.9 158.5 82.7 111.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 211 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 212 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 213 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 214 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 215 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 216 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 217 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 218 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 219 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 220 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 221 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 222 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 223 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 224 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 225 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 226 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 227 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 228 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 229 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 230 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 231 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 232 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 233 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 234 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 235 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 236 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 237 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 238 DBREF 3MVS A 1 210 UNP Q99PF4 CAD23_MOUSE 24 233 SEQRES 1 A 210 GLN VAL ASN ARG LEU PRO PHE PHE THR ASN HIS PHE PHE SEQRES 2 A 210 ASP THR TYR LEU LEU ILE SER GLU ASP THR PRO VAL GLY SEQRES 3 A 210 SER SER VAL THR GLN LEU LEU ALA ARG ASP MET ASP ASN SEQRES 4 A 210 ASP PRO LEU VAL PHE GLY VAL SER GLY GLU GLU ALA SER SEQRES 5 A 210 ARG PHE PHE ALA VAL GLU PRO ASP THR GLY VAL VAL TRP SEQRES 6 A 210 LEU ARG GLN PRO LEU ASP ARG GLU THR LYS SER GLU PHE SEQRES 7 A 210 THR VAL GLU PHE SER VAL SER ASP HIS GLN GLY VAL ILE SEQRES 8 A 210 THR ARG LYS VAL ASN ILE GLN VAL GLY ASP VAL ASN ASP SEQRES 9 A 210 ASN ALA PRO THR PHE HIS ASN GLN PRO TYR SER VAL ARG SEQRES 10 A 210 ILE PRO GLU ASN THR PRO VAL GLY THR PRO ILE PHE ILE SEQRES 11 A 210 VAL ASN ALA THR ASP PRO ASP LEU GLY ALA GLY GLY SER SEQRES 12 A 210 VAL LEU TYR SER PHE GLN PRO PRO SER PRO PHE PHE ALA SEQRES 13 A 210 ILE ASP SER ALA ARG GLY ILE VAL THR VAL ILE GLN GLU SEQRES 14 A 210 LEU ASP TYR GLU VAL THR GLN ALA TYR GLN LEU THR VAL SEQRES 15 A 210 ASN ALA THR ASP GLN ASP LYS THR ARG PRO LEU SER THR SEQRES 16 A 210 LEU ALA ASN LEU ALA ILE ILE ILE THR ASP MET GLN ASP SEQRES 17 A 210 MET ASP HET CA A 211 1 HET CA A 212 1 HET CA A 213 1 HET CA A 214 1 HET CA A 215 1 HET CA A 216 1 HET EDO A 217 4 HET EDO A 218 4 HET EDO A 219 4 HET EDO A 220 4 HET EDO A 221 4 HET EDO A 222 4 HET EDO A 223 4 HET EDO A 224 4 HET EDO A 225 4 HET EDO A 226 4 HET EDO A 227 4 HET EDO A 228 4 HET EDO A 229 4 HET EDO A 230 4 HET EDO A 231 4 HET EDO A 232 4 HET EDO A 233 4 HET EDO A 234 4 HET EDO A 235 4 HET EDO A 236 4 HET EDO A 237 4 HET EDO A 238 4 HETNAM CA CALCIUM ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 CA 6(CA 2+) FORMUL 8 EDO 22(C2 H6 O2) FORMUL 30 HOH *279(H2 O) HELIX 1 1 ASN A 10 ASP A 14 5 5 HELIX 2 2 GLY A 48 PHE A 54 1 7 HELIX 3 3 LEU A 138 GLY A 142 5 5 SHEET 1 A 2 PHE A 7 PHE A 8 0 SHEET 2 A 2 ALA A 34 ARG A 35 -1 O ARG A 35 N PHE A 7 SHEET 1 B 4 LEU A 17 SER A 20 0 SHEET 2 B 4 VAL A 90 GLY A 100 1 O ASN A 96 N LEU A 17 SHEET 3 B 4 GLU A 77 SER A 85 -1 N PHE A 78 O ILE A 97 SHEET 4 B 4 VAL A 43 SER A 47 -1 N SER A 47 O GLU A 81 SHEET 1 C 3 SER A 28 GLN A 31 0 SHEET 2 C 3 VAL A 63 LEU A 66 -1 O VAL A 64 N VAL A 29 SHEET 3 C 3 PHE A 55 VAL A 57 -1 N ALA A 56 O TRP A 65 SHEET 1 D 2 THR A 108 PHE A 109 0 SHEET 2 D 2 ALA A 133 THR A 134 -1 O THR A 134 N THR A 108 SHEET 1 E 4 TYR A 114 PRO A 119 0 SHEET 2 E 4 SER A 194 THR A 204 1 O ILE A 202 N VAL A 116 SHEET 3 E 4 ALA A 177 ASP A 186 -1 N VAL A 182 O ALA A 197 SHEET 4 E 4 VAL A 144 PHE A 148 -1 N SER A 147 O ASN A 183 SHEET 1 F 3 PRO A 127 ILE A 130 0 SHEET 2 F 3 ILE A 163 VAL A 166 -1 O VAL A 164 N PHE A 129 SHEET 3 F 3 PHE A 155 ILE A 157 -1 N ALA A 156 O THR A 165 LINK OD1 ASN A 3 CA CA A 216 1555 1555 2.41 LINK O ARG A 4 CA CA A 216 1555 1555 2.28 LINK OE1 GLU A 21 CA CA A 211 1555 1555 2.34 LINK OE2 GLU A 21 CA CA A 212 1555 1555 2.34 LINK OD1 ASP A 36 CA CA A 216 1555 1555 2.42 LINK OD2 ASP A 36 CA CA A 216 1555 1555 2.60 LINK OD2 ASP A 38 CA CA A 216 1555 1555 2.40 LINK OD2 ASP A 40 CA CA A 216 1555 1555 2.36 LINK OD1 ASP A 71 CA CA A 211 1555 1555 2.34 LINK OE1 GLU A 73 CA CA A 211 1555 1555 2.33 LINK OE2 GLU A 73 CA CA A 212 1555 1555 2.42 LINK OE1 GLU A 73 CA CA A 212 1555 1555 2.74 LINK OD2 ASP A 86 CA CA A 216 1555 1555 2.42 LINK OD1 ASP A 101 CA CA A 212 1555 1555 2.31 LINK O VAL A 102 CA CA A 212 1555 1555 2.39 LINK OD1 ASN A 103 CA CA A 213 1555 1555 2.36 LINK OD2 ASP A 104 CA CA A 211 1555 1555 2.39 LINK OD1 ASP A 104 CA CA A 211 1555 1555 3.09 LINK OD1 ASP A 104 CA CA A 212 1555 1555 2.43 LINK O ASN A 105 CA CA A 213 1555 1555 2.35 LINK OE2 GLU A 120 CA CA A 214 1555 1555 2.40 LINK OE1 GLU A 120 CA CA A 215 1555 1555 2.37 LINK OD2 ASP A 135 CA CA A 213 1555 1555 2.40 LINK OD1 ASP A 135 CA CA A 213 1555 1555 2.48 LINK OD1 ASP A 137 CA CA A 212 1555 1555 2.32 LINK OD2 ASP A 137 CA CA A 213 1555 1555 2.41 LINK O GLY A 141 CA CA A 213 1555 1555 2.34 LINK OD1 ASP A 171 CA CA A 215 1555 1555 2.35 LINK OE2 GLU A 173 CA CA A 214 1555 1555 2.38 LINK OE1 GLU A 173 CA CA A 214 1555 1555 2.85 LINK OE1 GLU A 173 CA CA A 215 1555 1555 2.31 LINK OD2 ASP A 186 CA CA A 213 1555 1555 2.35 LINK OD1 ASP A 205 CA CA A 214 1555 1555 2.28 LINK O MET A 206 CA CA A 214 1555 1555 2.38 LINK OD1 ASP A 208 CA CA A 214 1555 1555 2.36 LINK OD2 ASP A 208 CA CA A 215 1555 1555 2.38 LINK CA CA A 211 O HOH A 335 1555 1555 2.32 LINK CA CA A 211 O HOH A 395 1555 1555 2.36 LINK CA CA A 214 O HOH A 486 1555 1555 2.43 LINK CA CA A 215 O HOH A 338 1555 1555 2.34 LINK CA CA A 215 O HOH A 485 1555 1555 2.37 CISPEP 1 GLN A 112 PRO A 113 0 1.74 CISPEP 2 GLN A 149 PRO A 150 0 -9.83 SITE 1 AC1 6 GLU A 21 ASP A 71 GLU A 73 ASP A 104 SITE 2 AC1 6 HOH A 335 HOH A 395 SITE 1 AC2 6 GLU A 21 GLU A 73 ASP A 101 VAL A 102 SITE 2 AC2 6 ASP A 104 ASP A 137 SITE 1 AC3 6 ASN A 103 ASN A 105 ASP A 135 ASP A 137 SITE 2 AC3 6 GLY A 141 ASP A 186 SITE 1 AC4 6 GLU A 120 GLU A 173 ASP A 205 MET A 206 SITE 2 AC4 6 ASP A 208 HOH A 486 SITE 1 AC5 6 GLU A 120 ASP A 171 GLU A 173 ASP A 208 SITE 2 AC5 6 HOH A 338 HOH A 485 SITE 1 AC6 6 ASN A 3 ARG A 4 ASP A 36 ASP A 38 SITE 2 AC6 6 ASP A 40 ASP A 86 SITE 1 AC7 4 ASN A 3 ASP A 38 ASP A 40 GLN A 88 SITE 1 AC8 1 ASN A 39 SITE 1 AC9 6 LYS A 75 SER A 76 GLU A 77 ASN A 198 SITE 2 AC9 6 HOH A 277 HOH A 366 SITE 1 BC1 1 PRO A 127 SITE 1 BC2 3 THR A 9 ASN A 10 ASP A 14 SITE 1 BC3 5 GLU A 21 ASP A 22 THR A 23 PRO A 69 SITE 2 BC3 5 HOH A 375 SITE 1 BC4 3 GLU A 58 HOH A 274 HOH A 510 SITE 1 BC5 3 ASN A 111 ILE A 130 HOH A 380 SITE 1 BC6 6 VAL A 131 ASN A 132 TYR A 146 ARG A 161 SITE 2 BC6 6 GLU A 173 HOH A 441 SITE 1 BC7 2 PHE A 12 THR A 30 SITE 1 BC8 2 ASN A 3 HOH A 279 SITE 1 BC9 4 PHE A 8 ILE A 91 ARG A 93 HOH A 438 SITE 1 CC1 4 VAL A 57 GLN A 168 HOH A 275 HOH A 334 SITE 1 CC2 4 ALA A 106 PRO A 107 THR A 108 HOH A 342 SITE 1 CC3 2 ASN A 111 HOH A 431 SITE 1 CC4 4 LEU A 138 GLY A 139 EDO A 235 HOH A 378 SITE 1 CC5 8 VAL A 46 SER A 47 GLY A 48 GLU A 49 SITE 2 CC5 8 PRO A 123 VAL A 124 GLU A 169 HOH A 497 SITE 1 CC6 3 ARG A 4 MET A 37 HOH A 483 SITE 1 CC7 10 ASP A 135 PRO A 136 ASP A 137 GLY A 142 SITE 2 CC7 10 VAL A 174 THR A 175 EDO A 232 EDO A 238 SITE 3 CC7 10 HOH A 299 HOH A 319 SITE 1 CC8 4 ASP A 205 MET A 206 GLN A 207 EDO A 237 SITE 1 CC9 2 ASP A 205 EDO A 236 SITE 1 DC1 8 THR A 134 ASP A 135 PRO A 136 VAL A 174 SITE 2 DC1 8 GLN A 176 EDO A 235 HOH A 387 HOH A 400 CRYST1 38.375 64.208 47.859 90.00 110.89 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026059 0.000000 0.009947 0.00000 SCALE2 0.000000 0.015574 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022365 0.00000