data_3MVU # _entry.id 3MVU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3MVU pdb_00003mvu 10.2210/pdb3mvu/pdb RCSB RCSB059057 ? ? WWPDB D_1000059057 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 394535 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3MVU _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-05-04 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of a TenA family transcription regulator (TM1040_3656) from SILICIBACTER SP. TM1040 at 1.80 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3MVU _cell.length_a 65.315 _cell.length_b 65.315 _cell.length_c 107.079 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3MVU _symmetry.Int_Tables_number 94 _symmetry.space_group_name_H-M 'P 42 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'TenA family transcriptional regulator' 25204.516 1 ? ? ? ? 2 non-polymer syn IMIDAZOLE 69.085 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 12 ? ? ? ? 4 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 5 water nat water 18.015 107 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)SEPYGKAFSL(MSE)RAEAEPAWRAYTHHAFVEGLKAGTLPREAFLHYLQQDYVFLIHFSRAWALAVVKSETHS E(MSE)LAAVGTVNALVAEE(MSE)QLHIGICEASGISQEALFATRERAENLAYTRFVLEAGYSGDLLDLLAALAPCV (MSE)GYGEIGKRLTAEATSTLYGDWIDTYGGDDYQAACKAVGTLLDDALERRLGAEFTSSPRWSRLCQTFHTATELEVG FWQ(MSE)GLTP ; _entity_poly.pdbx_seq_one_letter_code_can ;GMSEPYGKAFSLMRAEAEPAWRAYTHHAFVEGLKAGTLPREAFLHYLQQDYVFLIHFSRAWALAVVKSETHSEMLAAVGT VNALVAEEMQLHIGICEASGISQEALFATRERAENLAYTRFVLEAGYSGDLLDLLAALAPCVMGYGEIGKRLTAEATSTL YGDWIDTYGGDDYQAACKAVGTLLDDALERRLGAEFTSSPRWSRLCQTFHTATELEVGFWQMGLTP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 394535 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 SER n 1 4 GLU n 1 5 PRO n 1 6 TYR n 1 7 GLY n 1 8 LYS n 1 9 ALA n 1 10 PHE n 1 11 SER n 1 12 LEU n 1 13 MSE n 1 14 ARG n 1 15 ALA n 1 16 GLU n 1 17 ALA n 1 18 GLU n 1 19 PRO n 1 20 ALA n 1 21 TRP n 1 22 ARG n 1 23 ALA n 1 24 TYR n 1 25 THR n 1 26 HIS n 1 27 HIS n 1 28 ALA n 1 29 PHE n 1 30 VAL n 1 31 GLU n 1 32 GLY n 1 33 LEU n 1 34 LYS n 1 35 ALA n 1 36 GLY n 1 37 THR n 1 38 LEU n 1 39 PRO n 1 40 ARG n 1 41 GLU n 1 42 ALA n 1 43 PHE n 1 44 LEU n 1 45 HIS n 1 46 TYR n 1 47 LEU n 1 48 GLN n 1 49 GLN n 1 50 ASP n 1 51 TYR n 1 52 VAL n 1 53 PHE n 1 54 LEU n 1 55 ILE n 1 56 HIS n 1 57 PHE n 1 58 SER n 1 59 ARG n 1 60 ALA n 1 61 TRP n 1 62 ALA n 1 63 LEU n 1 64 ALA n 1 65 VAL n 1 66 VAL n 1 67 LYS n 1 68 SER n 1 69 GLU n 1 70 THR n 1 71 HIS n 1 72 SER n 1 73 GLU n 1 74 MSE n 1 75 LEU n 1 76 ALA n 1 77 ALA n 1 78 VAL n 1 79 GLY n 1 80 THR n 1 81 VAL n 1 82 ASN n 1 83 ALA n 1 84 LEU n 1 85 VAL n 1 86 ALA n 1 87 GLU n 1 88 GLU n 1 89 MSE n 1 90 GLN n 1 91 LEU n 1 92 HIS n 1 93 ILE n 1 94 GLY n 1 95 ILE n 1 96 CYS n 1 97 GLU n 1 98 ALA n 1 99 SER n 1 100 GLY n 1 101 ILE n 1 102 SER n 1 103 GLN n 1 104 GLU n 1 105 ALA n 1 106 LEU n 1 107 PHE n 1 108 ALA n 1 109 THR n 1 110 ARG n 1 111 GLU n 1 112 ARG n 1 113 ALA n 1 114 GLU n 1 115 ASN n 1 116 LEU n 1 117 ALA n 1 118 TYR n 1 119 THR n 1 120 ARG n 1 121 PHE n 1 122 VAL n 1 123 LEU n 1 124 GLU n 1 125 ALA n 1 126 GLY n 1 127 TYR n 1 128 SER n 1 129 GLY n 1 130 ASP n 1 131 LEU n 1 132 LEU n 1 133 ASP n 1 134 LEU n 1 135 LEU n 1 136 ALA n 1 137 ALA n 1 138 LEU n 1 139 ALA n 1 140 PRO n 1 141 CYS n 1 142 VAL n 1 143 MSE n 1 144 GLY n 1 145 TYR n 1 146 GLY n 1 147 GLU n 1 148 ILE n 1 149 GLY n 1 150 LYS n 1 151 ARG n 1 152 LEU n 1 153 THR n 1 154 ALA n 1 155 GLU n 1 156 ALA n 1 157 THR n 1 158 SER n 1 159 THR n 1 160 LEU n 1 161 TYR n 1 162 GLY n 1 163 ASP n 1 164 TRP n 1 165 ILE n 1 166 ASP n 1 167 THR n 1 168 TYR n 1 169 GLY n 1 170 GLY n 1 171 ASP n 1 172 ASP n 1 173 TYR n 1 174 GLN n 1 175 ALA n 1 176 ALA n 1 177 CYS n 1 178 LYS n 1 179 ALA n 1 180 VAL n 1 181 GLY n 1 182 THR n 1 183 LEU n 1 184 LEU n 1 185 ASP n 1 186 ASP n 1 187 ALA n 1 188 LEU n 1 189 GLU n 1 190 ARG n 1 191 ARG n 1 192 LEU n 1 193 GLY n 1 194 ALA n 1 195 GLU n 1 196 PHE n 1 197 THR n 1 198 SER n 1 199 SER n 1 200 PRO n 1 201 ARG n 1 202 TRP n 1 203 SER n 1 204 ARG n 1 205 LEU n 1 206 CYS n 1 207 GLN n 1 208 THR n 1 209 PHE n 1 210 HIS n 1 211 THR n 1 212 ALA n 1 213 THR n 1 214 GLU n 1 215 LEU n 1 216 GLU n 1 217 VAL n 1 218 GLY n 1 219 PHE n 1 220 TRP n 1 221 GLN n 1 222 MSE n 1 223 GLY n 1 224 LEU n 1 225 THR n 1 226 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene TM1040_3656 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Ruegeria sp. TM1040' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 292414 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q1GL43_SILST _struct_ref.pdbx_db_accession Q1GL43 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSEPYGKAFSLMRAEAEPAWRAYTHHAFVEGLKAGTLPREAFLHYLQQDYVFLIHFSRAWALAVVKSETHSEMLAAVGTV NALVAEEMQLHIGICEASGISQEALFATRERAENLAYTRFVLEAGYSGDLLDLLAALAPCVMGYGEIGKRLTAEATSTLY GDWIDTYGGDDYQAACKAVGTLLDDALERRLGAEFTSSPRWSRLCQTFHTATELEVGFWQMGLTP ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3MVU _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 226 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q1GL43 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 225 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 225 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3MVU _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q1GL43 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IMD non-polymer . IMIDAZOLE ? 'C3 H5 N2 1' 69.085 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3MVU # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.27 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 45.71 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details ;0.2000M magnesium acetate, 22.0000% polyethylene glycol 8000, 0.1M sodium cacodylate pH 6.0, NANODROP', VAPOR DIFFUSION, SITTING DROP, temperature 293K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2009-06-12 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97935 1.0 3 0.97882 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list 0.91837,0.97935,0.97882 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3MVU _reflns.d_resolution_high 1.80 _reflns.d_resolution_low 29.210 _reflns.number_obs 22224 _reflns.pdbx_Rmerge_I_obs 0.065 _reflns.pdbx_netI_over_sigmaI 18.100 _reflns.pdbx_Rsym_value 0.065 _reflns.pdbx_redundancy 7.100 _reflns.percent_possible_obs 99.900 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.B_iso_Wilson_estimate 28 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 1.80 1.85 ? 11519 ? 0.666 1.2 0.666 ? 7.20 ? 1610 100.00 ? 1 1.85 1.90 ? 11208 ? 0.548 1.4 0.548 ? 7.20 ? 1557 100.00 ? 2 1.90 1.95 ? 10863 ? 0.417 1.8 0.417 ? 7.10 ? 1520 100.00 ? 3 1.95 2.01 ? 10712 ? 0.321 2.4 0.321 ? 7.20 ? 1496 100.00 ? 4 2.01 2.08 ? 10208 ? 0.243 3.1 0.243 ? 7.20 ? 1419 100.00 ? 5 2.08 2.15 ? 10112 ? 0.187 4.1 0.187 ? 7.20 ? 1413 100.00 ? 6 2.15 2.23 ? 9669 ? 0.141 5.3 0.141 ? 7.20 ? 1351 100.00 ? 7 2.23 2.32 ? 9393 ? 0.120 6.2 0.120 ? 7.10 ? 1316 100.00 ? 8 2.32 2.43 ? 8890 ? 0.103 6.9 0.103 ? 7.10 ? 1248 100.00 ? 9 2.43 2.55 ? 8464 ? 0.087 7.7 0.087 ? 7.10 ? 1184 100.00 ? 10 2.55 2.68 ? 8136 ? 0.083 8.3 0.083 ? 7.10 ? 1147 100.00 ? 11 2.68 2.85 ? 7759 ? 0.078 8.4 0.078 ? 7.10 ? 1098 100.00 ? 12 2.85 3.04 ? 7205 ? 0.074 8.4 0.074 ? 7.10 ? 1018 100.00 ? 13 3.04 3.29 ? 6871 ? 0.061 10.0 0.061 ? 7.00 ? 977 100.00 ? 14 3.29 3.60 ? 6170 ? 0.050 12.3 0.050 ? 7.00 ? 884 100.00 ? 15 3.60 4.02 ? 5725 ? 0.039 15.3 0.039 ? 7.00 ? 823 100.00 ? 16 4.02 4.65 ? 5010 ? 0.042 14.3 0.042 ? 6.80 ? 735 100.00 ? 17 4.65 5.69 ? 4117 ? 0.045 13.4 0.045 ? 6.70 ? 618 100.00 ? 18 5.69 8.05 ? 3226 ? 0.039 15.8 0.039 ? 6.30 ? 511 99.90 ? 19 8.05 29.21 ? 1600 ? 0.033 18.4 0.033 ? 5.40 ? 299 95.70 ? 20 # _refine.entry_id 3MVU _refine.ls_d_res_high 1.800 _refine.ls_d_res_low 29.210 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.940 _refine.ls_number_reflns_obs 22179 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. 3. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 4. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 5. CHLORIDE (CL) ION, IMIDAZOLE (IMD), AND ETHYLENE GLYCOL (EDO) MOLECULES FROM THE PURIFICATION/CRYOPROTECTION SOLUTION ARE MODELED. 6. RESIDUES 84-91 HAVE POOR ELECTRON DENSITY SUPPORT. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.165 _refine.ls_R_factor_R_work 0.165 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.179 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1132 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 38.752 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.050 _refine.aniso_B[2][2] 0.050 _refine.aniso_B[3][3] -0.100 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.967 _refine.correlation_coeff_Fo_to_Fc_free 0.964 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free 0.100 _refine.overall_SU_ML 0.067 _refine.overall_SU_B 4.476 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 129.65 _refine.B_iso_min 18.83 _refine.occupancy_max 1.00 _refine.occupancy_min 0.30 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1722 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 54 _refine_hist.number_atoms_solvent 107 _refine_hist.number_atoms_total 1883 _refine_hist.d_res_high 1.800 _refine_hist.d_res_low 29.210 # loop_ _refine_ls_restr.type _refine_ls_restr.pdbx_refine_id _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 'X-RAY DIFFRACTION' 1855 0.016 0.021 ? ? r_bond_other_d 'X-RAY DIFFRACTION' 1272 0.001 0.020 ? ? r_angle_refined_deg 'X-RAY DIFFRACTION' 2502 1.378 1.958 ? ? r_angle_other_deg 'X-RAY DIFFRACTION' 3059 0.908 3.000 ? ? r_dihedral_angle_1_deg 'X-RAY DIFFRACTION' 238 4.742 5.000 ? ? r_dihedral_angle_2_deg 'X-RAY DIFFRACTION' 80 29.605 22.250 ? ? r_dihedral_angle_3_deg 'X-RAY DIFFRACTION' 284 13.846 15.000 ? ? r_dihedral_angle_4_deg 'X-RAY DIFFRACTION' 15 18.220 15.000 ? ? r_chiral_restr 'X-RAY DIFFRACTION' 272 0.078 0.200 ? ? r_gen_planes_refined 'X-RAY DIFFRACTION' 2081 0.007 0.020 ? ? r_gen_planes_other 'X-RAY DIFFRACTION' 419 0.001 0.020 ? ? # _refine_ls_shell.d_res_high 1.800 _refine_ls_shell.d_res_low 1.847 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 100.000 _refine_ls_shell.number_reflns_R_work 1530 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.218 _refine_ls_shell.R_factor_R_free 0.201 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 77 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1607 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3MVU _struct.title 'Crystal structure of a TenA family transcription regulator (TM1040_3656) from SILICIBACTER SP. TM1040 at 1.80 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;TENA/THI-4/PQQC family, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, TRANSCRIPTION, transcription regulator ; _struct_keywords.pdbx_keywords 'transcription regulator' _struct_keywords.entry_id 3MVU # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 3 ? O N N 4 ? P N N 5 ? # _struct_biol.id 1 _struct_biol.details 'LIGHT SCATTERING SUPPORTS THE ASSIGNMENT OF A TETRAMER AS A SIGNIFICANT OLIGOMERIZATION STATE IN SOLUTION.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 7 ? ALA A 17 ? GLY A 6 ALA A 16 1 ? 11 HELX_P HELX_P2 2 PRO A 19 ? HIS A 26 ? PRO A 18 HIS A 25 1 ? 8 HELX_P HELX_P3 3 HIS A 27 ? ALA A 35 ? HIS A 26 ALA A 34 1 ? 9 HELX_P HELX_P4 4 PRO A 39 ? LYS A 67 ? PRO A 38 LYS A 66 1 ? 29 HELX_P HELX_P5 5 THR A 70 ? ALA A 86 ? THR A 69 ALA A 85 1 ? 17 HELX_P HELX_P6 6 GLU A 87 ? SER A 99 ? GLU A 86 SER A 98 1 ? 13 HELX_P HELX_P7 7 SER A 102 ? ALA A 108 ? SER A 101 ALA A 107 1 ? 7 HELX_P HELX_P8 8 ARG A 112 ? GLY A 129 ? ARG A 111 GLY A 128 1 ? 18 HELX_P HELX_P9 9 ASP A 130 ? ALA A 156 ? ASP A 129 ALA A 155 1 ? 27 HELX_P HELX_P10 10 TYR A 161 ? GLY A 170 ? TYR A 160 GLY A 169 1 ? 10 HELX_P HELX_P11 11 GLY A 170 ? GLY A 193 ? GLY A 169 GLY A 192 1 ? 24 HELX_P HELX_P12 12 GLU A 195 ? SER A 199 ? GLU A 194 SER A 198 5 ? 5 HELX_P HELX_P13 13 PRO A 200 ? LEU A 224 ? PRO A 199 LEU A 223 1 ? 25 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 2 C ? ? ? 1_555 A SER 3 N ? ? A MSE 1 A SER 2 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale2 covale both ? A LEU 12 C ? ? ? 1_555 A MSE 13 N ? ? A LEU 11 A MSE 12 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale3 covale both ? A MSE 13 C ? ? ? 1_555 A ARG 14 N ? ? A MSE 12 A ARG 13 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale4 covale both ? A GLU 73 C ? ? ? 1_555 A MSE 74 N ? ? A GLU 72 A MSE 73 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale5 covale both ? A MSE 74 C ? ? ? 1_555 A LEU 75 N ? ? A MSE 73 A LEU 74 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale6 covale both ? A GLU 88 C ? ? ? 1_555 A MSE 89 N ? ? A GLU 87 A MSE 88 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale7 covale both ? A MSE 89 C ? ? ? 1_555 A GLN 90 N ? ? A MSE 88 A GLN 89 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale8 covale both ? A VAL 142 C ? ? ? 1_555 A MSE 143 N ? ? A VAL 141 A MSE 142 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale9 covale both ? A MSE 143 C ? ? ? 1_555 A GLY 144 N ? ? A MSE 142 A GLY 143 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale10 covale both ? A GLN 221 C ? ? ? 1_555 A MSE 222 N ? ? A GLN 220 A MSE 221 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale11 covale both ? A MSE 222 C ? ? ? 1_555 A GLY 223 N ? ? A MSE 221 A GLY 222 1_555 ? ? ? ? ? ? ? 1.324 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLU _struct_mon_prot_cis.label_seq_id 18 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLU _struct_mon_prot_cis.auth_seq_id 17 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 19 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 18 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 2.12 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A IMD 226 ? 7 'BINDING SITE FOR RESIDUE IMD A 226' AC2 Software A EDO 227 ? 5 'BINDING SITE FOR RESIDUE EDO A 227' AC3 Software A EDO 228 ? 6 'BINDING SITE FOR RESIDUE EDO A 228' AC4 Software A EDO 229 ? 8 'BINDING SITE FOR RESIDUE EDO A 229' AC5 Software A EDO 230 ? 8 'BINDING SITE FOR RESIDUE EDO A 230' AC6 Software A EDO 231 ? 5 'BINDING SITE FOR RESIDUE EDO A 231' AC7 Software A EDO 232 ? 7 'BINDING SITE FOR RESIDUE EDO A 232' AC8 Software A EDO 233 ? 5 'BINDING SITE FOR RESIDUE EDO A 233' AC9 Software A EDO 234 ? 4 'BINDING SITE FOR RESIDUE EDO A 234' BC1 Software A EDO 235 ? 6 'BINDING SITE FOR RESIDUE EDO A 235' BC2 Software A EDO 236 ? 5 'BINDING SITE FOR RESIDUE EDO A 236' BC3 Software A EDO 237 ? 3 'BINDING SITE FOR RESIDUE EDO A 237' BC4 Software A EDO 238 ? 2 'BINDING SITE FOR RESIDUE EDO A 238' BC5 Software A CL 239 ? 3 'BINDING SITE FOR RESIDUE CL A 239' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 ASP A 50 ? ASP A 49 . ? 1_555 ? 2 AC1 7 PHE A 53 ? PHE A 52 . ? 1_555 ? 3 AC1 7 CYS A 141 ? CYS A 140 . ? 1_555 ? 4 AC1 7 TYR A 145 ? TYR A 144 . ? 1_555 ? 5 AC1 7 GLU A 216 ? GLU A 215 . ? 1_555 ? 6 AC1 7 PHE A 219 ? PHE A 218 . ? 1_555 ? 7 AC1 7 EDO M . ? EDO A 237 . ? 1_555 ? 8 AC2 5 SER A 72 ? SER A 71 . ? 1_555 ? 9 AC2 5 THR A 182 ? THR A 181 . ? 1_555 ? 10 AC2 5 LEU A 183 ? LEU A 182 . ? 1_555 ? 11 AC2 5 ASP A 186 ? ASP A 185 . ? 1_555 ? 12 AC2 5 HOH P . ? HOH A 264 . ? 1_555 ? 13 AC3 6 ARG A 59 ? ARG A 58 . ? 1_555 ? 14 AC3 6 VAL A 66 ? VAL A 65 . ? 2_665 ? 15 AC3 6 LYS A 67 ? LYS A 66 . ? 2_665 ? 16 AC3 6 SER A 68 ? SER A 67 . ? 2_665 ? 17 AC3 6 ARG A 204 ? ARG A 203 . ? 7_556 ? 18 AC3 6 EDO K . ? EDO A 235 . ? 7_556 ? 19 AC4 8 ARG A 110 ? ARG A 109 . ? 7_556 ? 20 AC4 8 GLN A 207 ? GLN A 206 . ? 1_555 ? 21 AC4 8 HIS A 210 ? HIS A 209 . ? 1_555 ? 22 AC4 8 THR A 211 ? THR A 210 . ? 1_555 ? 23 AC4 8 GLU A 214 ? GLU A 213 . ? 1_555 ? 24 AC4 8 EDO F . ? EDO A 230 . ? 1_555 ? 25 AC4 8 EDO J . ? EDO A 234 . ? 1_555 ? 26 AC4 8 HOH P . ? HOH A 294 . ? 7_556 ? 27 AC5 8 ARG A 110 ? ARG A 109 . ? 7_556 ? 28 AC5 8 ALA A 113 ? ALA A 112 . ? 7_556 ? 29 AC5 8 THR A 211 ? THR A 210 . ? 1_555 ? 30 AC5 8 GLU A 214 ? GLU A 213 . ? 1_555 ? 31 AC5 8 EDO E . ? EDO A 229 . ? 1_555 ? 32 AC5 8 EDO I . ? EDO A 233 . ? 7_556 ? 33 AC5 8 HOH P . ? HOH A 247 . ? 1_555 ? 34 AC5 8 HOH P . ? HOH A 312 . ? 7_556 ? 35 AC6 5 LYS A 8 ? LYS A 7 . ? 1_555 ? 36 AC6 5 ALA A 194 ? ALA A 193 . ? 1_555 ? 37 AC6 5 GLU A 195 ? GLU A 194 . ? 1_555 ? 38 AC6 5 PHE A 196 ? PHE A 195 . ? 1_555 ? 39 AC6 5 THR A 197 ? THR A 196 . ? 1_555 ? 40 AC7 7 GLU A 69 ? GLU A 68 . ? 1_555 ? 41 AC7 7 ARG A 190 ? ARG A 189 . ? 1_555 ? 42 AC7 7 ARG A 191 ? ARG A 190 . ? 1_555 ? 43 AC7 7 PRO A 200 ? PRO A 199 . ? 8_666 ? 44 AC7 7 ARG A 201 ? ARG A 200 . ? 8_666 ? 45 AC7 7 ARG A 204 ? ARG A 203 . ? 8_666 ? 46 AC7 7 HOH P . ? HOH A 248 . ? 1_555 ? 47 AC8 5 ARG A 110 ? ARG A 109 . ? 1_555 ? 48 AC8 5 ARG A 112 ? ARG A 111 . ? 1_555 ? 49 AC8 5 ALA A 113 ? ALA A 112 . ? 1_555 ? 50 AC8 5 GLU A 114 ? GLU A 113 . ? 1_555 ? 51 AC8 5 EDO F . ? EDO A 230 . ? 7_556 ? 52 AC9 4 GLU A 16 ? GLU A 15 . ? 1_555 ? 53 AC9 4 GLN A 207 ? GLN A 206 . ? 1_555 ? 54 AC9 4 HIS A 210 ? HIS A 209 . ? 1_555 ? 55 AC9 4 EDO E . ? EDO A 229 . ? 1_555 ? 56 BC1 6 ALA A 125 ? ALA A 124 . ? 1_555 ? 57 BC1 6 ASP A 133 ? ASP A 132 . ? 1_555 ? 58 BC1 6 ARG A 204 ? ARG A 203 . ? 1_555 ? 59 BC1 6 THR A 208 ? THR A 207 . ? 1_555 ? 60 BC1 6 EDO D . ? EDO A 228 . ? 7_556 ? 61 BC1 6 HOH P . ? HOH A 306 . ? 1_555 ? 62 BC2 5 ALA A 113 ? ALA A 112 . ? 1_555 ? 63 BC2 5 ALA A 113 ? ALA A 112 . ? 7_556 ? 64 BC2 5 GLU A 114 ? GLU A 113 . ? 1_555 ? 65 BC2 5 GLU A 114 ? GLU A 113 . ? 7_556 ? 66 BC2 5 HOH P . ? HOH A 257 . ? 1_555 ? 67 BC3 3 GLU A 88 ? GLU A 87 . ? 1_555 ? 68 BC3 3 TYR A 173 ? TYR A 172 . ? 1_555 ? 69 BC3 3 IMD B . ? IMD A 226 . ? 1_555 ? 70 BC4 2 GLU A 16 ? GLU A 15 . ? 1_555 ? 71 BC4 2 PRO A 19 ? PRO A 18 . ? 2_655 ? 72 BC5 3 HIS A 45 ? HIS A 44 . ? 1_555 ? 73 BC5 3 GLN A 49 ? GLN A 48 . ? 1_555 ? 74 BC5 3 HOH P . ? HOH A 338 . ? 1_555 ? # _atom_sites.entry_id 3MVU _atom_sites.fract_transf_matrix[1][1] 0.015310 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015310 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009339 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 SER 3 2 2 SER SER A . n A 1 4 GLU 4 3 3 GLU GLU A . n A 1 5 PRO 5 4 4 PRO PRO A . n A 1 6 TYR 6 5 5 TYR TYR A . n A 1 7 GLY 7 6 6 GLY GLY A . n A 1 8 LYS 8 7 7 LYS LYS A . n A 1 9 ALA 9 8 8 ALA ALA A . n A 1 10 PHE 10 9 9 PHE PHE A . n A 1 11 SER 11 10 10 SER SER A . n A 1 12 LEU 12 11 11 LEU LEU A . n A 1 13 MSE 13 12 12 MSE MSE A . n A 1 14 ARG 14 13 13 ARG ARG A . n A 1 15 ALA 15 14 14 ALA ALA A . n A 1 16 GLU 16 15 15 GLU GLU A . n A 1 17 ALA 17 16 16 ALA ALA A . n A 1 18 GLU 18 17 17 GLU GLU A . n A 1 19 PRO 19 18 18 PRO PRO A . n A 1 20 ALA 20 19 19 ALA ALA A . n A 1 21 TRP 21 20 20 TRP TRP A . n A 1 22 ARG 22 21 21 ARG ARG A . n A 1 23 ALA 23 22 22 ALA ALA A . n A 1 24 TYR 24 23 23 TYR TYR A . n A 1 25 THR 25 24 24 THR THR A . n A 1 26 HIS 26 25 25 HIS HIS A . n A 1 27 HIS 27 26 26 HIS HIS A . n A 1 28 ALA 28 27 27 ALA ALA A . n A 1 29 PHE 29 28 28 PHE PHE A . n A 1 30 VAL 30 29 29 VAL VAL A . n A 1 31 GLU 31 30 30 GLU GLU A . n A 1 32 GLY 32 31 31 GLY GLY A . n A 1 33 LEU 33 32 32 LEU LEU A . n A 1 34 LYS 34 33 33 LYS LYS A . n A 1 35 ALA 35 34 34 ALA ALA A . n A 1 36 GLY 36 35 35 GLY GLY A . n A 1 37 THR 37 36 36 THR THR A . n A 1 38 LEU 38 37 37 LEU LEU A . n A 1 39 PRO 39 38 38 PRO PRO A . n A 1 40 ARG 40 39 39 ARG ARG A . n A 1 41 GLU 41 40 40 GLU GLU A . n A 1 42 ALA 42 41 41 ALA ALA A . n A 1 43 PHE 43 42 42 PHE PHE A . n A 1 44 LEU 44 43 43 LEU LEU A . n A 1 45 HIS 45 44 44 HIS HIS A . n A 1 46 TYR 46 45 45 TYR TYR A . n A 1 47 LEU 47 46 46 LEU LEU A . n A 1 48 GLN 48 47 47 GLN GLN A . n A 1 49 GLN 49 48 48 GLN GLN A . n A 1 50 ASP 50 49 49 ASP ASP A . n A 1 51 TYR 51 50 50 TYR TYR A . n A 1 52 VAL 52 51 51 VAL VAL A . n A 1 53 PHE 53 52 52 PHE PHE A . n A 1 54 LEU 54 53 53 LEU LEU A . n A 1 55 ILE 55 54 54 ILE ILE A . n A 1 56 HIS 56 55 55 HIS HIS A . n A 1 57 PHE 57 56 56 PHE PHE A . n A 1 58 SER 58 57 57 SER SER A . n A 1 59 ARG 59 58 58 ARG ARG A . n A 1 60 ALA 60 59 59 ALA ALA A . n A 1 61 TRP 61 60 60 TRP TRP A . n A 1 62 ALA 62 61 61 ALA ALA A . n A 1 63 LEU 63 62 62 LEU LEU A . n A 1 64 ALA 64 63 63 ALA ALA A . n A 1 65 VAL 65 64 64 VAL VAL A . n A 1 66 VAL 66 65 65 VAL VAL A . n A 1 67 LYS 67 66 66 LYS LYS A . n A 1 68 SER 68 67 67 SER SER A . n A 1 69 GLU 69 68 68 GLU GLU A . n A 1 70 THR 70 69 69 THR THR A . n A 1 71 HIS 71 70 70 HIS HIS A . n A 1 72 SER 72 71 71 SER SER A . n A 1 73 GLU 73 72 72 GLU GLU A . n A 1 74 MSE 74 73 73 MSE MSE A . n A 1 75 LEU 75 74 74 LEU LEU A . n A 1 76 ALA 76 75 75 ALA ALA A . n A 1 77 ALA 77 76 76 ALA ALA A . n A 1 78 VAL 78 77 77 VAL VAL A . n A 1 79 GLY 79 78 78 GLY GLY A . n A 1 80 THR 80 79 79 THR THR A . n A 1 81 VAL 81 80 80 VAL VAL A . n A 1 82 ASN 82 81 81 ASN ASN A . n A 1 83 ALA 83 82 82 ALA ALA A . n A 1 84 LEU 84 83 83 LEU LEU A . n A 1 85 VAL 85 84 84 VAL VAL A . n A 1 86 ALA 86 85 85 ALA ALA A . n A 1 87 GLU 87 86 86 GLU GLU A . n A 1 88 GLU 88 87 87 GLU GLU A . n A 1 89 MSE 89 88 88 MSE MSE A . n A 1 90 GLN 90 89 89 GLN GLN A . n A 1 91 LEU 91 90 90 LEU LEU A . n A 1 92 HIS 92 91 91 HIS HIS A . n A 1 93 ILE 93 92 92 ILE ILE A . n A 1 94 GLY 94 93 93 GLY GLY A . n A 1 95 ILE 95 94 94 ILE ILE A . n A 1 96 CYS 96 95 95 CYS CYS A . n A 1 97 GLU 97 96 96 GLU GLU A . n A 1 98 ALA 98 97 97 ALA ALA A . n A 1 99 SER 99 98 98 SER SER A . n A 1 100 GLY 100 99 99 GLY GLY A . n A 1 101 ILE 101 100 100 ILE ILE A . n A 1 102 SER 102 101 101 SER SER A . n A 1 103 GLN 103 102 102 GLN GLN A . n A 1 104 GLU 104 103 103 GLU GLU A . n A 1 105 ALA 105 104 104 ALA ALA A . n A 1 106 LEU 106 105 105 LEU LEU A . n A 1 107 PHE 107 106 106 PHE PHE A . n A 1 108 ALA 108 107 107 ALA ALA A . n A 1 109 THR 109 108 108 THR THR A . n A 1 110 ARG 110 109 109 ARG ARG A . n A 1 111 GLU 111 110 110 GLU GLU A . n A 1 112 ARG 112 111 111 ARG ARG A . n A 1 113 ALA 113 112 112 ALA ALA A . n A 1 114 GLU 114 113 113 GLU GLU A . n A 1 115 ASN 115 114 114 ASN ASN A . n A 1 116 LEU 116 115 115 LEU LEU A . n A 1 117 ALA 117 116 116 ALA ALA A . n A 1 118 TYR 118 117 117 TYR TYR A . n A 1 119 THR 119 118 118 THR THR A . n A 1 120 ARG 120 119 119 ARG ARG A . n A 1 121 PHE 121 120 120 PHE PHE A . n A 1 122 VAL 122 121 121 VAL VAL A . n A 1 123 LEU 123 122 122 LEU LEU A . n A 1 124 GLU 124 123 123 GLU GLU A . n A 1 125 ALA 125 124 124 ALA ALA A . n A 1 126 GLY 126 125 125 GLY GLY A . n A 1 127 TYR 127 126 126 TYR TYR A . n A 1 128 SER 128 127 127 SER SER A . n A 1 129 GLY 129 128 128 GLY GLY A . n A 1 130 ASP 130 129 129 ASP ASP A . n A 1 131 LEU 131 130 130 LEU LEU A . n A 1 132 LEU 132 131 131 LEU LEU A . n A 1 133 ASP 133 132 132 ASP ASP A . n A 1 134 LEU 134 133 133 LEU LEU A . n A 1 135 LEU 135 134 134 LEU LEU A . n A 1 136 ALA 136 135 135 ALA ALA A . n A 1 137 ALA 137 136 136 ALA ALA A . n A 1 138 LEU 138 137 137 LEU LEU A . n A 1 139 ALA 139 138 138 ALA ALA A . n A 1 140 PRO 140 139 139 PRO PRO A . n A 1 141 CYS 141 140 140 CYS CYS A . n A 1 142 VAL 142 141 141 VAL VAL A . n A 1 143 MSE 143 142 142 MSE MSE A . n A 1 144 GLY 144 143 143 GLY GLY A . n A 1 145 TYR 145 144 144 TYR TYR A . n A 1 146 GLY 146 145 145 GLY GLY A . n A 1 147 GLU 147 146 146 GLU GLU A . n A 1 148 ILE 148 147 147 ILE ILE A . n A 1 149 GLY 149 148 148 GLY GLY A . n A 1 150 LYS 150 149 149 LYS LYS A . n A 1 151 ARG 151 150 150 ARG ARG A . n A 1 152 LEU 152 151 151 LEU LEU A . n A 1 153 THR 153 152 152 THR THR A . n A 1 154 ALA 154 153 153 ALA ALA A . n A 1 155 GLU 155 154 154 GLU GLU A . n A 1 156 ALA 156 155 155 ALA ALA A . n A 1 157 THR 157 156 156 THR THR A . n A 1 158 SER 158 157 157 SER SER A . n A 1 159 THR 159 158 158 THR THR A . n A 1 160 LEU 160 159 159 LEU LEU A . n A 1 161 TYR 161 160 160 TYR TYR A . n A 1 162 GLY 162 161 161 GLY GLY A . n A 1 163 ASP 163 162 162 ASP ASP A . n A 1 164 TRP 164 163 163 TRP TRP A . n A 1 165 ILE 165 164 164 ILE ILE A . n A 1 166 ASP 166 165 165 ASP ASP A . n A 1 167 THR 167 166 166 THR THR A . n A 1 168 TYR 168 167 167 TYR TYR A . n A 1 169 GLY 169 168 168 GLY GLY A . n A 1 170 GLY 170 169 169 GLY GLY A . n A 1 171 ASP 171 170 170 ASP ASP A . n A 1 172 ASP 172 171 171 ASP ASP A . n A 1 173 TYR 173 172 172 TYR TYR A . n A 1 174 GLN 174 173 173 GLN GLN A . n A 1 175 ALA 175 174 174 ALA ALA A . n A 1 176 ALA 176 175 175 ALA ALA A . n A 1 177 CYS 177 176 176 CYS CYS A . n A 1 178 LYS 178 177 177 LYS LYS A . n A 1 179 ALA 179 178 178 ALA ALA A . n A 1 180 VAL 180 179 179 VAL VAL A . n A 1 181 GLY 181 180 180 GLY GLY A . n A 1 182 THR 182 181 181 THR THR A . n A 1 183 LEU 183 182 182 LEU LEU A . n A 1 184 LEU 184 183 183 LEU LEU A . n A 1 185 ASP 185 184 184 ASP ASP A . n A 1 186 ASP 186 185 185 ASP ASP A . n A 1 187 ALA 187 186 186 ALA ALA A . n A 1 188 LEU 188 187 187 LEU LEU A . n A 1 189 GLU 189 188 188 GLU GLU A . n A 1 190 ARG 190 189 189 ARG ARG A . n A 1 191 ARG 191 190 190 ARG ARG A . n A 1 192 LEU 192 191 191 LEU LEU A . n A 1 193 GLY 193 192 192 GLY GLY A . n A 1 194 ALA 194 193 193 ALA ALA A . n A 1 195 GLU 195 194 194 GLU GLU A . n A 1 196 PHE 196 195 195 PHE PHE A . n A 1 197 THR 197 196 196 THR THR A . n A 1 198 SER 198 197 197 SER SER A . n A 1 199 SER 199 198 198 SER SER A . n A 1 200 PRO 200 199 199 PRO PRO A . n A 1 201 ARG 201 200 200 ARG ARG A . n A 1 202 TRP 202 201 201 TRP TRP A . n A 1 203 SER 203 202 202 SER SER A . n A 1 204 ARG 204 203 203 ARG ARG A . n A 1 205 LEU 205 204 204 LEU LEU A . n A 1 206 CYS 206 205 205 CYS CYS A . n A 1 207 GLN 207 206 206 GLN GLN A . n A 1 208 THR 208 207 207 THR THR A . n A 1 209 PHE 209 208 208 PHE PHE A . n A 1 210 HIS 210 209 209 HIS HIS A . n A 1 211 THR 211 210 210 THR THR A . n A 1 212 ALA 212 211 211 ALA ALA A . n A 1 213 THR 213 212 212 THR THR A . n A 1 214 GLU 214 213 213 GLU GLU A . n A 1 215 LEU 215 214 214 LEU LEU A . n A 1 216 GLU 216 215 215 GLU GLU A . n A 1 217 VAL 217 216 216 VAL VAL A . n A 1 218 GLY 218 217 217 GLY GLY A . n A 1 219 PHE 219 218 218 PHE PHE A . n A 1 220 TRP 220 219 219 TRP TRP A . n A 1 221 GLN 221 220 220 GLN GLN A . n A 1 222 MSE 222 221 221 MSE MSE A . n A 1 223 GLY 223 222 222 GLY GLY A . n A 1 224 LEU 224 223 223 LEU LEU A . n A 1 225 THR 225 224 224 THR THR A . n A 1 226 PRO 226 225 225 PRO PRO A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IMD 1 226 1 IMD IMD A . C 3 EDO 1 227 2 EDO EDO A . D 3 EDO 1 228 3 EDO EDO A . E 3 EDO 1 229 4 EDO EDO A . F 3 EDO 1 230 5 EDO EDO A . G 3 EDO 1 231 6 EDO EDO A . H 3 EDO 1 232 7 EDO EDO A . I 3 EDO 1 233 8 EDO EDO A . J 3 EDO 1 234 9 EDO EDO A . K 3 EDO 1 235 10 EDO EDO A . L 3 EDO 1 236 11 EDO EDO A . M 3 EDO 1 237 12 EDO EDO A . N 3 EDO 1 238 13 EDO EDO A . O 4 CL 1 239 14 CL CL A . P 5 HOH 1 240 15 HOH HOH A . P 5 HOH 2 241 16 HOH HOH A . P 5 HOH 3 242 17 HOH HOH A . P 5 HOH 4 243 18 HOH HOH A . P 5 HOH 5 244 19 HOH HOH A . P 5 HOH 6 245 20 HOH HOH A . P 5 HOH 7 246 21 HOH HOH A . P 5 HOH 8 247 22 HOH HOH A . P 5 HOH 9 248 23 HOH HOH A . P 5 HOH 10 249 24 HOH HOH A . P 5 HOH 11 250 25 HOH HOH A . P 5 HOH 12 251 26 HOH HOH A . P 5 HOH 13 252 27 HOH HOH A . P 5 HOH 14 253 28 HOH HOH A . P 5 HOH 15 254 29 HOH HOH A . P 5 HOH 16 255 30 HOH HOH A . P 5 HOH 17 256 31 HOH HOH A . P 5 HOH 18 257 32 HOH HOH A . P 5 HOH 19 258 33 HOH HOH A . P 5 HOH 20 259 34 HOH HOH A . P 5 HOH 21 260 35 HOH HOH A . P 5 HOH 22 261 36 HOH HOH A . P 5 HOH 23 262 37 HOH HOH A . P 5 HOH 24 263 38 HOH HOH A . P 5 HOH 25 264 39 HOH HOH A . P 5 HOH 26 265 40 HOH HOH A . P 5 HOH 27 266 41 HOH HOH A . P 5 HOH 28 267 42 HOH HOH A . P 5 HOH 29 268 43 HOH HOH A . P 5 HOH 30 269 44 HOH HOH A . P 5 HOH 31 270 45 HOH HOH A . P 5 HOH 32 271 46 HOH HOH A . P 5 HOH 33 272 47 HOH HOH A . P 5 HOH 34 273 48 HOH HOH A . P 5 HOH 35 274 49 HOH HOH A . P 5 HOH 36 275 50 HOH HOH A . P 5 HOH 37 276 51 HOH HOH A . P 5 HOH 38 277 52 HOH HOH A . P 5 HOH 39 278 53 HOH HOH A . P 5 HOH 40 279 54 HOH HOH A . P 5 HOH 41 280 55 HOH HOH A . P 5 HOH 42 281 56 HOH HOH A . P 5 HOH 43 282 57 HOH HOH A . P 5 HOH 44 283 58 HOH HOH A . P 5 HOH 45 284 59 HOH HOH A . P 5 HOH 46 285 60 HOH HOH A . P 5 HOH 47 286 61 HOH HOH A . P 5 HOH 48 287 62 HOH HOH A . P 5 HOH 49 288 63 HOH HOH A . P 5 HOH 50 289 64 HOH HOH A . P 5 HOH 51 290 65 HOH HOH A . P 5 HOH 52 291 66 HOH HOH A . P 5 HOH 53 292 67 HOH HOH A . P 5 HOH 54 293 68 HOH HOH A . P 5 HOH 55 294 69 HOH HOH A . P 5 HOH 56 295 70 HOH HOH A . P 5 HOH 57 296 71 HOH HOH A . P 5 HOH 58 297 72 HOH HOH A . P 5 HOH 59 298 73 HOH HOH A . P 5 HOH 60 299 74 HOH HOH A . P 5 HOH 61 300 75 HOH HOH A . P 5 HOH 62 301 76 HOH HOH A . P 5 HOH 63 302 77 HOH HOH A . P 5 HOH 64 303 78 HOH HOH A . P 5 HOH 65 304 79 HOH HOH A . P 5 HOH 66 305 80 HOH HOH A . P 5 HOH 67 306 81 HOH HOH A . P 5 HOH 68 307 82 HOH HOH A . P 5 HOH 69 308 83 HOH HOH A . P 5 HOH 70 309 84 HOH HOH A . P 5 HOH 71 310 85 HOH HOH A . P 5 HOH 72 311 86 HOH HOH A . P 5 HOH 73 312 87 HOH HOH A . P 5 HOH 74 313 88 HOH HOH A . P 5 HOH 75 314 89 HOH HOH A . P 5 HOH 76 315 90 HOH HOH A . P 5 HOH 77 316 91 HOH HOH A . P 5 HOH 78 317 92 HOH HOH A . P 5 HOH 79 318 93 HOH HOH A . P 5 HOH 80 319 94 HOH HOH A . P 5 HOH 81 320 95 HOH HOH A . P 5 HOH 82 321 96 HOH HOH A . P 5 HOH 83 322 97 HOH HOH A . P 5 HOH 84 323 98 HOH HOH A . P 5 HOH 85 324 99 HOH HOH A . P 5 HOH 86 325 100 HOH HOH A . P 5 HOH 87 326 101 HOH HOH A . P 5 HOH 88 327 102 HOH HOH A . P 5 HOH 89 328 103 HOH HOH A . P 5 HOH 90 329 104 HOH HOH A . P 5 HOH 91 330 105 HOH HOH A . P 5 HOH 92 331 106 HOH HOH A . P 5 HOH 93 332 107 HOH HOH A . P 5 HOH 94 333 108 HOH HOH A . P 5 HOH 95 334 109 HOH HOH A . P 5 HOH 96 335 110 HOH HOH A . P 5 HOH 97 336 111 HOH HOH A . P 5 HOH 98 337 112 HOH HOH A . P 5 HOH 99 338 113 HOH HOH A . P 5 HOH 100 339 114 HOH HOH A . P 5 HOH 101 340 115 HOH HOH A . P 5 HOH 102 341 116 HOH HOH A . P 5 HOH 103 342 117 HOH HOH A . P 5 HOH 104 343 118 HOH HOH A . P 5 HOH 105 344 119 HOH HOH A . P 5 HOH 106 345 120 HOH HOH A . P 5 HOH 107 346 121 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 13 A MSE 12 ? MET SELENOMETHIONINE 3 A MSE 74 A MSE 73 ? MET SELENOMETHIONINE 4 A MSE 89 A MSE 88 ? MET SELENOMETHIONINE 5 A MSE 143 A MSE 142 ? MET SELENOMETHIONINE 6 A MSE 222 A MSE 221 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7550 ? 1 MORE -51.8 ? 1 'SSA (A^2)' 32950 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1.0000000000 0.0000000000 0.0000000000 65.3150000000 0.0000000000 -1.0000000000 0.0000000000 65.3150000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 7_556 y,x,-z+1 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 107.0790000000 4 'crystal symmetry operation' 8_666 -y+1,-x+1,-z+1 0.0000000000 -1.0000000000 0.0000000000 65.3150000000 -1.0000000000 0.0000000000 0.0000000000 65.3150000000 0.0000000000 0.0000000000 -1.0000000000 107.0790000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-05-26 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2019-07-17 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Author supporting evidence' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_struct_assembly_auth_evidence 2 3 'Structure model' software 3 4 'Structure model' software 4 4 'Structure model' struct_conn 5 5 'Structure model' database_2 6 5 'Structure model' struct_ref_seq_dif 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 26.5590 _pdbx_refine_tls.origin_y 16.3840 _pdbx_refine_tls.origin_z 40.0830 _pdbx_refine_tls.T[1][1] 0.1155 _pdbx_refine_tls.T[2][2] 0.0470 _pdbx_refine_tls.T[3][3] 0.0280 _pdbx_refine_tls.T[1][2] -0.0212 _pdbx_refine_tls.T[1][3] -0.0185 _pdbx_refine_tls.T[2][3] -0.0050 _pdbx_refine_tls.L[1][1] 1.4730 _pdbx_refine_tls.L[2][2] 1.5292 _pdbx_refine_tls.L[3][3] 1.6119 _pdbx_refine_tls.L[1][2] 0.3749 _pdbx_refine_tls.L[1][3] 0.1605 _pdbx_refine_tls.L[2][3] 0.1120 _pdbx_refine_tls.S[1][1] 0.0063 _pdbx_refine_tls.S[2][2] 0.0987 _pdbx_refine_tls.S[3][3] -0.1051 _pdbx_refine_tls.S[1][2] 0.2141 _pdbx_refine_tls.S[1][3] -0.0697 _pdbx_refine_tls.S[2][3] 0.0077 _pdbx_refine_tls.S[2][1] -0.2415 _pdbx_refine_tls.S[3][1] 0.1394 _pdbx_refine_tls.S[3][2] -0.0496 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 1 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 225 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.6.0059 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 SCALA 3.2.5 5/04/2004 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 7 SHELXD . ? ? ? ? phasing ? ? ? 8 autoSHARP . ? ? ? ? phasing ? ? ? 9 # _pdbx_entry_details.entry_id 3MVU _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 58 ? ? CZ A ARG 58 ? ? NH1 A ARG 58 ? ? 124.11 120.30 3.81 0.50 N 2 1 NE A ARG 200 ? B CZ A ARG 200 ? B NH2 A ARG 200 ? B 116.52 120.30 -3.78 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 86 ? ? -158.64 -78.43 2 1 GLU A 194 ? ? -90.22 56.21 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 40 ? CD ? A GLU 41 CD 2 1 Y 1 A GLU 40 ? OE1 ? A GLU 41 OE1 3 1 Y 1 A GLU 40 ? OE2 ? A GLU 41 OE2 4 1 Y 1 A GLU 86 ? CG ? A GLU 87 CG 5 1 Y 1 A GLU 86 ? CD ? A GLU 87 CD 6 1 Y 1 A GLU 86 ? OE1 ? A GLU 87 OE1 7 1 Y 1 A GLU 86 ? OE2 ? A GLU 87 OE2 8 1 Y 1 A ILE 94 ? CG1 ? A ILE 95 CG1 9 1 Y 1 A ILE 94 ? CG2 ? A ILE 95 CG2 10 1 Y 1 A ILE 94 ? CD1 ? A ILE 95 CD1 11 1 Y 1 A ILE 100 ? CG1 ? A ILE 101 CG1 12 1 Y 1 A ILE 100 ? CG2 ? A ILE 101 CG2 13 1 Y 1 A ILE 100 ? CD1 ? A ILE 101 CD1 14 1 Y 1 A GLN 102 ? CG ? A GLN 103 CG 15 1 Y 1 A GLN 102 ? CD ? A GLN 103 CD 16 1 Y 1 A GLN 102 ? OE1 ? A GLN 103 OE1 17 1 Y 1 A GLN 102 ? NE2 ? A GLN 103 NE2 18 1 Y 1 A GLU 103 ? CG ? A GLU 104 CG 19 1 Y 1 A GLU 103 ? CD ? A GLU 104 CD 20 1 Y 1 A GLU 103 ? OE1 ? A GLU 104 OE1 21 1 Y 1 A GLU 103 ? OE2 ? A GLU 104 OE2 22 1 Y 1 A LYS 149 ? CD ? A LYS 150 CD 23 1 Y 1 A LYS 149 ? CE ? A LYS 150 CE 24 1 Y 1 A LYS 149 ? NZ ? A LYS 150 NZ 25 1 Y 1 A GLU 194 ? CG ? A GLU 195 CG 26 1 Y 1 A GLU 194 ? CD ? A GLU 195 CD 27 1 Y 1 A GLU 194 ? OE1 ? A GLU 195 OE1 28 1 Y 1 A GLU 194 ? OE2 ? A GLU 195 OE2 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id GLY _pdbx_unobs_or_zero_occ_residues.auth_seq_id 0 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id GLY _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 IMIDAZOLE IMD 3 1,2-ETHANEDIOL EDO 4 'CHLORIDE ION' CL 5 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'light scattering' _pdbx_struct_assembly_auth_evidence.details ? #