HEADER CELL ADHESION 05-MAY-10 3MW2 TITLE CRYSTAL STRUCTURE OF BETA-NEUREXIN 1 WITH THE SPLICE INSERT 4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NEUREXIN-1-ALPHA; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 1132 TO 1334; COMPND 5 SYNONYM: NEUREXIN I-ALPHA; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: NRXN1, KIAA0578; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: HEK293 KEYWDS NEUREXIN, LNS DOMAIN, CALCIUM-BINDING, CELL ADHESION, GLYCOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR X.JIN,L.SHAPIRO REVDAT 5 06-SEP-23 3MW2 1 HETSYN REVDAT 4 29-JUL-20 3MW2 1 COMPND REMARK SEQADV HETNAM REVDAT 4 2 1 LINK SITE ATOM REVDAT 3 08-NOV-17 3MW2 1 REMARK REVDAT 2 13-JUL-11 3MW2 1 VERSN REVDAT 1 28-JUL-10 3MW2 0 JRNL AUTH J.KOEHNKE,P.S.KATSAMBA,G.AHLSEN,F.BAHNA,J.VENDOME,B.HONIG, JRNL AUTH 2 L.SHAPIRO,X.JIN JRNL TITL SPLICE FORM DEPENDENCE OF BETA-NEUREXIN/NEUROLIGIN BINDING JRNL TITL 2 INTERACTIONS. JRNL REF NEURON V. 67 61 2010 JRNL REFN ISSN 0896-6273 JRNL PMID 20624592 JRNL DOI 10.1016/J.NEURON.2010.06.001 REMARK 2 REMARK 2 RESOLUTION. 2.69 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.69 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 13752 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.287 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 739 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.69 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.76 REMARK 3 REFLECTION IN BIN (WORKING SET) : 946 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.79 REMARK 3 BIN R VALUE (WORKING SET) : 0.3480 REMARK 3 BIN FREE R VALUE SET COUNT : 50 REMARK 3 BIN FREE R VALUE : 0.4610 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3041 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 83 REMARK 3 SOLVENT ATOMS : 148 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.64000 REMARK 3 B22 (A**2) : 0.97000 REMARK 3 B33 (A**2) : -2.05000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.91000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.386 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.300 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 26.824 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.934 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.840 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3209 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4357 ; 1.234 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 397 ; 6.661 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 150 ;41.204 ;23.867 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 524 ;17.007 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;15.592 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 495 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2414 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1235 ; 0.200 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2105 ; 0.306 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 166 ; 0.154 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 54 ; 0.202 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 5 ; 0.196 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1994 ; 0.407 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3115 ; 0.736 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1365 ; 1.031 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1238 ; 1.832 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 84 A 288 REMARK 3 ORIGIN FOR THE GROUP (A): 25.8861 -0.2447 13.8177 REMARK 3 T TENSOR REMARK 3 T11: -0.2254 T22: -0.2546 REMARK 3 T33: -0.0914 T12: -0.0022 REMARK 3 T13: -0.0412 T23: 0.0424 REMARK 3 L TENSOR REMARK 3 L11: 2.7608 L22: 3.0247 REMARK 3 L33: 4.9124 L12: 1.2406 REMARK 3 L13: 0.2850 L23: 0.0432 REMARK 3 S TENSOR REMARK 3 S11: 0.1038 S12: -0.1793 S13: -0.0361 REMARK 3 S21: 0.0586 S22: -0.2336 S23: 0.0515 REMARK 3 S31: -0.1204 S32: 0.1480 S33: 0.1299 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 84 B 288 REMARK 3 ORIGIN FOR THE GROUP (A): 10.9478 -7.8196 40.0964 REMARK 3 T TENSOR REMARK 3 T11: -0.0725 T22: 0.0030 REMARK 3 T33: -0.0784 T12: -0.1857 REMARK 3 T13: 0.0081 T23: -0.0083 REMARK 3 L TENSOR REMARK 3 L11: 5.7740 L22: 3.4622 REMARK 3 L33: 6.0680 L12: 1.5389 REMARK 3 L13: 1.2641 L23: 0.7916 REMARK 3 S TENSOR REMARK 3 S11: 0.0785 S12: -0.6569 S13: 0.2714 REMARK 3 S21: 0.2340 S22: -0.2759 S23: 0.1607 REMARK 3 S31: -0.1429 S32: -0.3377 S33: 0.1973 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3MW2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-MAY-10. REMARK 100 THE DEPOSITION ID IS D_1000059065. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 4.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : SI (111) CRYSTAL MONOCHROMATOR REMARK 200 WITH VERTICAL FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14339 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 78.3 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : 0.09000 REMARK 200 FOR THE DATA SET : 19.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ID 3BOD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 26% PEG1000, 0.2M LITHIUM SULFATE, REMARK 280 0.1M PHOSPHATE-CITRATE, PH 4.9, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 42.94500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.90950 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 42.94500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 29.90950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL UNIT IS A MONOMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 82 REMARK 465 PRO A 83 REMARK 465 TYR A 198 REMARK 465 PRO A 199 REMARK 465 ALA A 200 REMARK 465 GLY A 201 REMARK 465 ASN A 202 REMARK 465 ASN A 203 REMARK 465 ASP A 204 REMARK 465 ASN A 205 REMARK 465 GLU A 206 REMARK 465 ARG A 207 REMARK 465 GLY B 82 REMARK 465 PRO B 83 REMARK 465 PRO B 199 REMARK 465 ALA B 200 REMARK 465 GLY B 201 REMARK 465 ASN B 202 REMARK 465 ASN B 203 REMARK 465 ASP B 204 REMARK 465 ASN B 205 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 208 CG CD1 CD2 REMARK 470 TYR B 198 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU B 206 CG CD OE1 OE2 REMARK 470 ARG B 207 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 208 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 225 O HOH B 23 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CG1 VAL B 194 O HOH A 20 3445 1.81 REMARK 500 CG1 VAL A 194 O HOH B 9 3555 1.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASN A 103 N - CA - CB ANGL. DEV. = -13.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 102 -1.77 -51.77 REMARK 500 ARG A 105 104.90 -54.68 REMARK 500 THR A 156 -133.83 58.66 REMARK 500 ASN A 169 58.99 -97.69 REMARK 500 LEU A 228 77.53 -117.67 REMARK 500 ALA B 124 147.81 -177.61 REMARK 500 THR B 156 -75.83 -93.16 REMARK 500 ASN B 169 47.31 -100.05 REMARK 500 LEU B 208 -72.10 -73.37 REMARK 500 LEU B 228 54.50 -94.47 REMARK 500 ARG B 232 38.15 -87.36 REMARK 500 ASN B 264 51.71 39.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3MW3 RELATED DB: PDB REMARK 900 RELATED ID: 3MW4 RELATED DB: PDB DBREF 3MW2 A 86 288 UNP Q9CS84 NRX1A_MOUSE 1132 1334 DBREF 3MW2 B 86 288 UNP Q9CS84 NRX1A_MOUSE 1132 1334 SEQADV 3MW2 GLY A 82 UNP Q9CS84 EXPRESSION TAG SEQADV 3MW2 PRO A 83 UNP Q9CS84 EXPRESSION TAG SEQADV 3MW2 GLY A 84 UNP Q9CS84 EXPRESSION TAG SEQADV 3MW2 SER A 85 UNP Q9CS84 EXPRESSION TAG SEQADV 3MW2 GLY B 82 UNP Q9CS84 EXPRESSION TAG SEQADV 3MW2 PRO B 83 UNP Q9CS84 EXPRESSION TAG SEQADV 3MW2 GLY B 84 UNP Q9CS84 EXPRESSION TAG SEQADV 3MW2 SER B 85 UNP Q9CS84 EXPRESSION TAG SEQRES 1 A 207 GLY PRO GLY SER THR TYR ILE PHE SER LYS GLY GLY GLY SEQRES 2 A 207 GLN ILE THR TYR LYS TRP PRO PRO ASN ASP ARG PRO SER SEQRES 3 A 207 THR ARG ALA ASP ARG LEU ALA ILE GLY PHE SER THR VAL SEQRES 4 A 207 GLN LYS GLU ALA VAL LEU VAL ARG VAL ASP SER SER SER SEQRES 5 A 207 GLY LEU GLY ASP TYR LEU GLU LEU HIS ILE HIS GLN GLY SEQRES 6 A 207 LYS ILE GLY VAL LYS PHE ASN VAL GLY THR ASP ASP ILE SEQRES 7 A 207 ALA ILE GLU GLU SER ASN ALA ILE ILE ASN ASP GLY LYS SEQRES 8 A 207 TYR HIS VAL VAL ARG PHE THR ARG SER GLY GLY ASN ALA SEQRES 9 A 207 THR LEU GLN VAL ASP SER TRP PRO VAL ILE GLU ARG TYR SEQRES 10 A 207 PRO ALA GLY ASN ASN ASP ASN GLU ARG LEU ALA ILE ALA SEQRES 11 A 207 ARG GLN ARG ILE PRO TYR ARG LEU GLY ARG VAL VAL ASP SEQRES 12 A 207 GLU TRP LEU LEU ASP LYS GLY ARG GLN LEU THR ILE PHE SEQRES 13 A 207 ASN SER GLN ALA THR ILE ILE ILE GLY GLY LYS GLU GLN SEQRES 14 A 207 GLY GLN PRO PHE GLN GLY GLN LEU SER GLY LEU TYR TYR SEQRES 15 A 207 ASN GLY LEU LYS VAL LEU ASN MET ALA ALA GLU ASN ASP SEQRES 16 A 207 ALA ASN ILE ALA ILE VAL GLY ASN VAL ARG LEU VAL SEQRES 1 B 207 GLY PRO GLY SER THR TYR ILE PHE SER LYS GLY GLY GLY SEQRES 2 B 207 GLN ILE THR TYR LYS TRP PRO PRO ASN ASP ARG PRO SER SEQRES 3 B 207 THR ARG ALA ASP ARG LEU ALA ILE GLY PHE SER THR VAL SEQRES 4 B 207 GLN LYS GLU ALA VAL LEU VAL ARG VAL ASP SER SER SER SEQRES 5 B 207 GLY LEU GLY ASP TYR LEU GLU LEU HIS ILE HIS GLN GLY SEQRES 6 B 207 LYS ILE GLY VAL LYS PHE ASN VAL GLY THR ASP ASP ILE SEQRES 7 B 207 ALA ILE GLU GLU SER ASN ALA ILE ILE ASN ASP GLY LYS SEQRES 8 B 207 TYR HIS VAL VAL ARG PHE THR ARG SER GLY GLY ASN ALA SEQRES 9 B 207 THR LEU GLN VAL ASP SER TRP PRO VAL ILE GLU ARG TYR SEQRES 10 B 207 PRO ALA GLY ASN ASN ASP ASN GLU ARG LEU ALA ILE ALA SEQRES 11 B 207 ARG GLN ARG ILE PRO TYR ARG LEU GLY ARG VAL VAL ASP SEQRES 12 B 207 GLU TRP LEU LEU ASP LYS GLY ARG GLN LEU THR ILE PHE SEQRES 13 B 207 ASN SER GLN ALA THR ILE ILE ILE GLY GLY LYS GLU GLN SEQRES 14 B 207 GLY GLN PRO PHE GLN GLY GLN LEU SER GLY LEU TYR TYR SEQRES 15 B 207 ASN GLY LEU LYS VAL LEU ASN MET ALA ALA GLU ASN ASP SEQRES 16 B 207 ALA ASN ILE ALA ILE VAL GLY ASN VAL ARG LEU VAL MODRES 3MW2 ASN A 184 ASN GLYCOSYLATION SITE MODRES 3MW2 ASN B 184 ASN GLYCOSYLATION SITE HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET PO4 A 1 5 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM PO4 PHOSPHATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 3 NAG 4(C8 H15 N O6) FORMUL 3 BMA 2(C6 H12 O6) FORMUL 5 PO4 O4 P 3- FORMUL 6 HOH *148(H2 O) HELIX 1 1 GLY A 247 GLY A 251 5 5 HELIX 2 2 LYS A 267 GLU A 274 1 8 HELIX 3 3 PRO B 101 ARG B 105 5 5 HELIX 4 4 GLY B 247 GLY B 251 5 5 HELIX 5 5 VAL B 268 GLU B 274 1 7 LINK ND2 ASN A 184 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN B 184 C1 NAG D 1 1555 1555 1.45 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.45 LINK O6 NAG C 1 C1 BMA C 3 1555 1555 1.43 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44 LINK O6 NAG D 1 C1 BMA D 3 1555 1555 1.44 CRYST1 85.890 59.819 105.697 90.00 103.86 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011643 0.000000 0.002873 0.00000 SCALE2 0.000000 0.016717 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009745 0.00000