HEADER CHAPERONE 05-MAY-10 3MWH TITLE THE 1.4 ANG CRYSTAL STRUCTURE OF THE ARSD ARSENIC METALLOCHAPERONE TITLE 2 PROVIDES INSIGHTS INTO ITS INTERACTIONS WITH THE ARSA ATPASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARSENICAL RESISTANCE OPERON TRANS-ACTING REPRESSOR ARSD; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: ARSD, R773; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PTYB2 KEYWDS ALPHA+BETA, ARSENICAL RESISTANCE, CHAPERONE, REPRESSOR, KEYWDS 2 TRANSCRIPTION, TRANSCRIPTION REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR J.YE,A.A.AJEES,J.YANG,B.P.ROSEN REVDAT 5 07-FEB-24 3MWH 1 JRNL REVDAT 4 06-SEP-23 3MWH 1 REMARK SEQADV REVDAT 3 08-NOV-17 3MWH 1 REMARK REVDAT 2 13-JUL-11 3MWH 1 VERSN REVDAT 1 26-MAY-10 3MWH 0 JRNL AUTH J.YE,A.A.AJEES,J.YANG,B.P.ROSEN JRNL TITL THE 1.4 A CRYSTAL STRUCTURE OF THE ARSD ARSENIC JRNL TITL 2 METALLOCHAPERONE PROVIDES INSIGHTS INTO ITS INTERACTION WITH JRNL TITL 3 THE ARSA ATPASE. JRNL REF BIOCHEMISTRY V. 49 5206 2010 JRNL REFN ISSN 0006-2960 JRNL PMID 20507177 JRNL DOI 10.1021/BI100571R REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.46 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 13712 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.274 REMARK 3 R VALUE (WORKING SET) : 0.271 REMARK 3 FREE R VALUE : 0.324 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 686 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 945 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.52 REMARK 3 BIN R VALUE (WORKING SET) : 0.2970 REMARK 3 BIN FREE R VALUE SET COUNT : 53 REMARK 3 BIN FREE R VALUE : 0.3240 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1534 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 113 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.96 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.88000 REMARK 3 B22 (A**2) : -2.05000 REMARK 3 B33 (A**2) : 3.34000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.52000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.243 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.167 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.460 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.915 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.892 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1568 ; 0.023 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2115 ; 1.992 ; 1.979 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 192 ; 7.374 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 69 ;42.865 ;25.072 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 278 ;19.267 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;16.935 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 236 ; 0.141 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1164 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 973 ; 1.129 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1558 ; 1.966 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 595 ; 3.148 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 557 ; 4.700 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 9 REMARK 3 ORIGIN FOR THE GROUP (A): 8.9193 -1.2231 17.5849 REMARK 3 T TENSOR REMARK 3 T11: 0.1639 T22: 0.1697 REMARK 3 T33: 0.0946 T12: -0.0201 REMARK 3 T13: 0.0302 T23: 0.0280 REMARK 3 L TENSOR REMARK 3 L11: 6.1826 L22: 8.8639 REMARK 3 L33: 10.3233 L12: -5.4877 REMARK 3 L13: 7.3467 L23: -6.9792 REMARK 3 S TENSOR REMARK 3 S11: -0.1702 S12: 0.0812 S13: 0.0125 REMARK 3 S21: 0.2976 S22: 0.0223 S23: 0.4128 REMARK 3 S31: -0.1304 S32: 0.1189 S33: 0.1479 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 20 A 109 REMARK 3 ORIGIN FOR THE GROUP (A): 10.7563 -1.4040 13.0067 REMARK 3 T TENSOR REMARK 3 T11: 0.1530 T22: 0.1076 REMARK 3 T33: 0.0392 T12: -0.0067 REMARK 3 T13: -0.0261 T23: 0.0019 REMARK 3 L TENSOR REMARK 3 L11: 2.3382 L22: 3.1301 REMARK 3 L33: 1.3931 L12: -0.7364 REMARK 3 L13: -0.5707 L23: 0.5530 REMARK 3 S TENSOR REMARK 3 S11: -0.0930 S12: 0.0289 S13: -0.1728 REMARK 3 S21: 0.0353 S22: 0.0004 S23: 0.2384 REMARK 3 S31: 0.2257 S32: -0.0124 S33: 0.0925 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 10 REMARK 3 ORIGIN FOR THE GROUP (A): 20.9809 19.4637 11.0183 REMARK 3 T TENSOR REMARK 3 T11: 0.1691 T22: 0.1890 REMARK 3 T33: 0.3088 T12: 0.0288 REMARK 3 T13: 0.0278 T23: -0.0635 REMARK 3 L TENSOR REMARK 3 L11: 7.9864 L22: 8.8351 REMARK 3 L33: 1.5521 L12: -6.1839 REMARK 3 L13: -2.0795 L23: -0.7187 REMARK 3 S TENSOR REMARK 3 S11: 0.0153 S12: 0.3362 S13: 0.2949 REMARK 3 S21: 0.4040 S22: -0.2904 S23: -0.1677 REMARK 3 S31: -0.0301 S32: -0.1218 S33: 0.2751 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 23 B 108 REMARK 3 ORIGIN FOR THE GROUP (A): 19.7268 17.2054 7.3213 REMARK 3 T TENSOR REMARK 3 T11: 0.0924 T22: 0.0949 REMARK 3 T33: 0.0437 T12: -0.0065 REMARK 3 T13: -0.0062 T23: -0.0066 REMARK 3 L TENSOR REMARK 3 L11: 1.4043 L22: 1.9730 REMARK 3 L33: 2.9857 L12: -0.0439 REMARK 3 L13: 0.1442 L23: -0.9728 REMARK 3 S TENSOR REMARK 3 S11: 0.0323 S12: 0.0392 S13: 0.1984 REMARK 3 S21: -0.1149 S22: 0.0240 S23: -0.1022 REMARK 3 S31: -0.0130 S32: 0.1019 S33: -0.0564 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3MWH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-MAY-10. REMARK 100 THE DEPOSITION ID IS D_1000059080. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUL-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-D REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS HTC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13712 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 40.460 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 3.120 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09100 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.12 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.05 REMARK 200 R MERGE FOR SHELL (I) : 0.34800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3KGK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 6000, 0.1M CALCIUM ACETATE, REMARK 280 0.1M HEPES, PH 7.4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 37.11150 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 10 REMARK 465 MET A 11 REMARK 465 CYS A 12 REMARK 465 CYS A 13 REMARK 465 SER A 14 REMARK 465 THR A 15 REMARK 465 GLY A 16 REMARK 465 VAL A 17 REMARK 465 CYS A 18 REMARK 465 GLY A 19 REMARK 465 GLY A 110 REMARK 465 CYS B 12 REMARK 465 CYS B 13 REMARK 465 SER B 14 REMARK 465 THR B 15 REMARK 465 GLY B 16 REMARK 465 VAL B 17 REMARK 465 CYS B 18 REMARK 465 GLY B 19 REMARK 465 THR B 20 REMARK 465 ASP B 21 REMARK 465 VAL B 22 REMARK 465 PRO B 109 REMARK 465 GLY B 110 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 32 NH1 ARG A 91 1.95 REMARK 500 NH2 ARG B 96 O HOH B 165 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 22 83.68 44.24 REMARK 500 ASP A 23 -96.27 -59.20 REMARK 500 GLN A 24 -58.60 178.32 REMARK 500 MET A 84 147.02 -172.70 REMARK 500 VAL A 105 -81.30 -94.08 REMARK 500 LEU A 107 96.60 115.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 106 LEU A 107 144.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 111 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3KGK RELATED DB: PDB DBREF 3MWH A 1 109 UNP P46003 ARSD1_ECOLX 1 109 DBREF 3MWH B 1 109 UNP P46003 ARSD1_ECOLX 1 109 SEQADV 3MWH GLY A 110 UNP P46003 EXPRESSION TAG SEQADV 3MWH GLY B 110 UNP P46003 EXPRESSION TAG SEQRES 1 A 110 MET LYS THR LEU MET VAL PHE ASP PRO ALA MET CYS CYS SEQRES 2 A 110 SER THR GLY VAL CYS GLY THR ASP VAL ASP GLN ALA LEU SEQRES 3 A 110 VAL ASP PHE SER THR ASP VAL GLN TRP LEU LYS GLN CYS SEQRES 4 A 110 GLY VAL GLN ILE GLU ARG PHE ASN LEU ALA GLN GLN PRO SEQRES 5 A 110 MET SER PHE VAL GLN ASN GLU LYS VAL LYS ALA PHE ILE SEQRES 6 A 110 GLU ALA SER GLY ALA GLU GLY LEU PRO LEU LEU LEU LEU SEQRES 7 A 110 ASP GLY GLU THR VAL MET ALA GLY ARG TYR PRO LYS ARG SEQRES 8 A 110 ALA GLU LEU ALA ARG TRP PHE GLY ILE PRO LEU ASP LYS SEQRES 9 A 110 VAL GLY LEU ALA PRO GLY SEQRES 1 B 110 MET LYS THR LEU MET VAL PHE ASP PRO ALA MET CYS CYS SEQRES 2 B 110 SER THR GLY VAL CYS GLY THR ASP VAL ASP GLN ALA LEU SEQRES 3 B 110 VAL ASP PHE SER THR ASP VAL GLN TRP LEU LYS GLN CYS SEQRES 4 B 110 GLY VAL GLN ILE GLU ARG PHE ASN LEU ALA GLN GLN PRO SEQRES 5 B 110 MET SER PHE VAL GLN ASN GLU LYS VAL LYS ALA PHE ILE SEQRES 6 B 110 GLU ALA SER GLY ALA GLU GLY LEU PRO LEU LEU LEU LEU SEQRES 7 B 110 ASP GLY GLU THR VAL MET ALA GLY ARG TYR PRO LYS ARG SEQRES 8 B 110 ALA GLU LEU ALA ARG TRP PHE GLY ILE PRO LEU ASP LYS SEQRES 9 B 110 VAL GLY LEU ALA PRO GLY HET GOL A 111 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL C3 H8 O3 FORMUL 4 HOH *113(H2 O) HELIX 1 1 GLN A 24 CYS A 39 1 16 HELIX 2 2 MET A 53 ASN A 58 1 6 HELIX 3 3 ASN A 58 GLY A 69 1 12 HELIX 4 4 ALA A 70 LEU A 73 5 4 HELIX 5 5 LYS A 90 GLY A 99 1 10 HELIX 6 6 ASP B 23 CYS B 39 1 17 HELIX 7 7 GLN B 51 ASN B 58 1 8 HELIX 8 8 ASN B 58 GLY B 69 1 12 HELIX 9 9 ALA B 70 LEU B 73 5 4 HELIX 10 10 LYS B 90 GLY B 99 1 10 HELIX 11 11 PRO B 101 VAL B 105 5 5 SHEET 1 A 4 ILE A 43 ASN A 47 0 SHEET 2 A 4 LEU A 4 ASP A 8 1 N ASP A 8 O PHE A 46 SHEET 3 A 4 LEU A 75 LEU A 78 -1 O LEU A 75 N PHE A 7 SHEET 4 A 4 GLU A 81 ALA A 85 -1 O GLU A 81 N LEU A 78 SHEET 1 B 4 GLN B 42 ASN B 47 0 SHEET 2 B 4 THR B 3 ASP B 8 1 N LEU B 4 O GLU B 44 SHEET 3 B 4 LEU B 75 LEU B 78 -1 O LEU B 75 N PHE B 7 SHEET 4 B 4 GLU B 81 ALA B 85 -1 O GLU B 81 N LEU B 78 CISPEP 1 LEU A 73 PRO A 74 0 2.26 CISPEP 2 LEU B 73 PRO B 74 0 6.48 SITE 1 AC1 6 ASP A 8 ARG A 45 PHE A 46 ASN A 47 SITE 2 AC1 6 GLN A 51 HOH A 112 CRYST1 37.676 74.223 40.830 90.00 97.77 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026542 0.000000 0.003623 0.00000 SCALE2 0.000000 0.013473 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024719 0.00000