HEADER TRANSPORT PROTEIN 12-MAY-10 3MZB TITLE X-RAY STRUCTURE OF NIKA IN COMPLEX WITH THE DOUBLY HYDROXYLATED IRON TITLE 2 COMPLEX, 1-O2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NICKEL-BINDING PERIPLASMIC PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: NIKA; COMPND 5 EC: 3.6.3.24; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: NIKA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS PROTEIN-BOUND IRON COMPLEX, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.CAVAZZA,C.BOCHOT,P.ROUSSELOT-PAILLEY,P.CARPENTIER,M.V.CHERRIER, AUTHOR 2 L.MARTIN,C.MARCHI-DELAPIERRE,J.C.FONTECILLA-CAMPS,S.MENAGE REVDAT 2 01-NOV-23 3MZB 1 REMARK LINK REVDAT 1 09-FEB-11 3MZB 0 JRNL AUTH C.CAVAZZA,C.BOCHOT,P.ROUSSELOT-PAILLEY,P.CARPENTIER, JRNL AUTH 2 M.V.CHERRIER,L.MARTIN,C.MARCHI-DELAPIERRE, JRNL AUTH 3 J.C.FONTECILLA-CAMPS,S.MENAGE JRNL TITL CRYSTALLOGRAPHIC SNAPSHOTS OF THE REACTION OF AROMATIC C-H JRNL TITL 2 WITH O(2) CATALYSED BY A PROTEIN-BOUND IRON COMPLEX JRNL REF NAT.CHEM. V. 2 1069 2010 JRNL REFN ISSN 1755-4330 JRNL PMID 21107372 JRNL DOI 10.1038/NCHEM.841 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.93 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 105673 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5562 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7722 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2430 REMARK 3 BIN FREE R VALUE SET COUNT : 406 REMARK 3 BIN FREE R VALUE : 0.2810 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7890 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 208 REMARK 3 SOLVENT ATOMS : 722 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.12000 REMARK 3 B22 (A**2) : -0.53000 REMARK 3 B33 (A**2) : 0.66000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.111 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.071 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.130 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8237 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11194 ; 1.362 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 992 ; 5.937 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 377 ;36.771 ;24.642 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1295 ;12.974 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 42 ;15.461 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1212 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6330 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5036 ; 1.303 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 8115 ; 1.640 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3201 ; 2.059 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3079 ; 3.316 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3MZB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-AUG-10. REMARK 100 THE DEPOSITION ID IS D_1000059182. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUN-08 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 4.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.96850 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 108346 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 46.930 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05800 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.4200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 92.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.28600 REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.450 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1ZLQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8M AMMONIUM SULFATE, 0.1M SODIUM REMARK 280 ACETATE, PH 4.7, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 43.52000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.36300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.93650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.36300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.52000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.93650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 VAL A 500 REMARK 465 LYS A 501 REMARK 465 ALA B 1 REMARK 465 ALA B 2 REMARK 465 PRO B 3 REMARK 465 VAL B 500 REMARK 465 LYS B 501 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLN A 96 CG CD OE1 NE2 REMARK 480 LYS A 115 CD CE NZ REMARK 480 LYS A 148 NZ REMARK 480 LYS A 171 CE NZ REMARK 480 GLU A 187 CD OE1 OE2 REMARK 480 LYS A 188 CG CD CE REMARK 480 LYS A 330 CG CD CE NZ REMARK 480 LYS B 111 CD CE NZ REMARK 480 LYS B 115 CG CD CE NZ REMARK 480 GLU B 187 CG CD OE1 OE2 REMARK 480 LYS B 192 CD CE NZ REMARK 480 LYS B 276 CG CD CE NZ REMARK 480 LYS B 321 CG CD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O6 BHR A 520 FE FE A 521 1.22 REMARK 500 O18 BHR A 520 FE FE A 521 1.29 REMARK 500 CE LYS A 171 OH TYR A 175 1.35 REMARK 500 NZ LYS A 171 OH TYR A 175 1.71 REMARK 500 O HOH A 571 O HOH A 784 1.85 REMARK 500 NE2 GLN A 287 O HOH A 868 1.87 REMARK 500 CE LYS A 171 CZ TYR A 175 1.99 REMARK 500 OD1 ASN B 149 O HOH B 848 2.06 REMARK 500 OE2 GLU A 495 O HOH A 865 2.08 REMARK 500 OE1 GLN B 131 O HOH B 854 2.13 REMARK 500 NH2 ARG B 231 O HOH B 861 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 880 O HOH B 770 4455 1.80 REMARK 500 OD2 ASP A 387 OD2 ASP B 460 3545 1.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS A 188 CE LYS A 188 NZ 0.273 REMARK 500 LYS B 111 CG LYS B 111 CD -0.473 REMARK 500 LYS B 115 CB LYS B 115 CG 0.283 REMARK 500 GLU B 187 CB GLU B 187 CG -0.172 REMARK 500 LYS B 276 CB LYS B 276 CG -0.191 REMARK 500 LYS B 321 CE LYS B 321 NZ -0.235 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS B 111 CB - CG - CD ANGL. DEV. = 51.6 DEGREES REMARK 500 LYS B 276 CA - CB - CG ANGL. DEV. = 14.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 22 -135.95 -113.16 REMARK 500 TRP A 49 -104.28 -133.08 REMARK 500 PRO A 128 20.25 -79.66 REMARK 500 PHE A 139 48.98 -90.03 REMARK 500 LYS A 157 -107.85 -92.67 REMARK 500 ASN A 220 -159.02 -90.95 REMARK 500 ASP A 311 82.68 -159.36 REMARK 500 SER A 415 36.47 -90.43 REMARK 500 TYR B 22 -133.78 -107.81 REMARK 500 TRP B 49 -101.63 -135.06 REMARK 500 PHE B 139 49.61 -92.36 REMARK 500 LYS B 157 -95.88 -87.00 REMARK 500 GLN B 174 -64.05 -124.74 REMARK 500 ASN B 220 -159.81 -88.80 REMARK 500 ASP B 311 81.16 -153.33 REMARK 500 ALA B 328 69.55 10.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 521 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 BHR A 520 O21 REMARK 620 2 BHR A 520 O23 172.3 REMARK 620 3 BHR A 520 N8 82.8 92.3 REMARK 620 4 BHR A 520 N11 96.4 77.1 84.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE B 507 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 BHR B 506 O6 REMARK 620 2 BHR B 506 O21 103.7 REMARK 620 3 BHR B 506 O23 88.2 163.6 REMARK 620 4 BHR B 506 N8 90.0 76.7 92.2 REMARK 620 5 BHR B 506 N11 160.3 89.7 76.1 79.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 510 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 511 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 512 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 513 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 514 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 515 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 516 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 517 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 518 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 519 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BHR A 520 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE A 521 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DTD A 522 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 523 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 525 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 526 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 527 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BHR B 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE B 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DTD B 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 510 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 511 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 512 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3MVX RELATED DB: PDB REMARK 900 RELATED ID: 3MVY RELATED DB: PDB REMARK 900 RELATED ID: 3MVZ RELATED DB: PDB REMARK 900 RELATED ID: 3MW0 RELATED DB: PDB REMARK 900 RELATED ID: 3MVW RELATED DB: PDB REMARK 900 RELATED ID: 3MZ9 RELATED DB: PDB DBREF 3MZB A 1 501 UNP P33590 NIKA_ECOLI 23 523 DBREF 3MZB B 1 501 UNP P33590 NIKA_ECOLI 23 523 SEQRES 1 A 501 ALA ALA PRO ASP GLU ILE THR THR ALA TRP PRO VAL ASN SEQRES 2 A 501 VAL GLY PRO LEU ASN PRO HIS LEU TYR THR PRO ASN GLN SEQRES 3 A 501 MET PHE ALA GLN SER MET VAL TYR GLU PRO LEU VAL LYS SEQRES 4 A 501 TYR GLN ALA ASP GLY SER VAL ILE PRO TRP LEU ALA LYS SEQRES 5 A 501 SER TRP THR HIS SER GLU ASP GLY LYS THR TRP THR PHE SEQRES 6 A 501 THR LEU ARG ASP ASP VAL LYS PHE SER ASN GLY GLU PRO SEQRES 7 A 501 PHE ASP ALA GLU ALA ALA ALA GLU ASN PHE ARG ALA VAL SEQRES 8 A 501 LEU ASP ASN ARG GLN ARG HIS ALA TRP LEU GLU LEU ALA SEQRES 9 A 501 ASN GLN ILE VAL ASP VAL LYS ALA LEU SER LYS THR GLU SEQRES 10 A 501 LEU GLN ILE THR LEU LYS SER ALA TYR TYR PRO PHE LEU SEQRES 11 A 501 GLN GLU LEU ALA LEU PRO ARG PRO PHE ARG PHE ILE ALA SEQRES 12 A 501 PRO SER GLN PHE LYS ASN HIS GLU THR MET ASN GLY ILE SEQRES 13 A 501 LYS ALA PRO ILE GLY THR GLY PRO TRP ILE LEU GLN GLU SEQRES 14 A 501 SER LYS LEU ASN GLN TYR ASP VAL PHE VAL ARG ASN GLU SEQRES 15 A 501 ASN TYR TRP GLY GLU LYS PRO ALA ILE LYS LYS ILE THR SEQRES 16 A 501 PHE ASN VAL ILE PRO ASP PRO THR THR ARG ALA VAL ALA SEQRES 17 A 501 PHE GLU THR GLY ASP ILE ASP LEU LEU TYR GLY ASN GLU SEQRES 18 A 501 GLY LEU LEU PRO LEU ASP THR PHE ALA ARG PHE SER GLN SEQRES 19 A 501 ASN PRO ALA TYR HIS THR GLN LEU SER GLN PRO ILE GLU SEQRES 20 A 501 THR VAL MET LEU ALA LEU ASN THR ALA LYS ALA PRO THR SEQRES 21 A 501 ASN GLU LEU ALA VAL ARG GLU ALA LEU ASN TYR ALA VAL SEQRES 22 A 501 ASN LYS LYS SER LEU ILE ASP ASN ALA LEU TYR GLY THR SEQRES 23 A 501 GLN GLN VAL ALA ASP THR LEU PHE ALA PRO SER VAL PRO SEQRES 24 A 501 TYR ALA ASN LEU GLY LEU LYS PRO SER GLN TYR ASP PRO SEQRES 25 A 501 GLN LYS ALA LYS ALA LEU LEU GLU LYS ALA GLY TRP THR SEQRES 26 A 501 LEU PRO ALA GLY LYS ASP ILE ARG GLU LYS ASN GLY GLN SEQRES 27 A 501 PRO LEU ARG ILE GLU LEU SER PHE ILE GLY THR ASP ALA SEQRES 28 A 501 LEU SER LYS SER MET ALA GLU ILE ILE GLN ALA ASP MET SEQRES 29 A 501 ARG GLN ILE GLY ALA ASP VAL SER LEU ILE GLY GLU GLU SEQRES 30 A 501 GLU SER SER ILE TYR ALA ARG GLN ARG ASP GLY ARG PHE SEQRES 31 A 501 GLY MET ILE PHE HIS ARG THR TRP GLY ALA PRO TYR ASP SEQRES 32 A 501 PRO HIS ALA PHE LEU SER SER MET ARG VAL PRO SER HIS SEQRES 33 A 501 ALA ASP PHE GLN ALA GLN GLN GLY LEU ALA ASP LYS PRO SEQRES 34 A 501 LEU ILE ASP LYS GLU ILE GLY GLU VAL LEU ALA THR HIS SEQRES 35 A 501 ASP GLU THR GLN ARG GLN ALA LEU TYR ARG ASP ILE LEU SEQRES 36 A 501 THR ARG LEU HIS ASP GLU ALA VAL TYR LEU PRO ILE SER SEQRES 37 A 501 TYR ILE SER MET MET VAL VAL SER LYS PRO GLU LEU GLY SEQRES 38 A 501 ASN ILE PRO TYR ALA PRO ILE ALA THR GLU ILE PRO PHE SEQRES 39 A 501 GLU GLN ILE LYS PRO VAL LYS SEQRES 1 B 501 ALA ALA PRO ASP GLU ILE THR THR ALA TRP PRO VAL ASN SEQRES 2 B 501 VAL GLY PRO LEU ASN PRO HIS LEU TYR THR PRO ASN GLN SEQRES 3 B 501 MET PHE ALA GLN SER MET VAL TYR GLU PRO LEU VAL LYS SEQRES 4 B 501 TYR GLN ALA ASP GLY SER VAL ILE PRO TRP LEU ALA LYS SEQRES 5 B 501 SER TRP THR HIS SER GLU ASP GLY LYS THR TRP THR PHE SEQRES 6 B 501 THR LEU ARG ASP ASP VAL LYS PHE SER ASN GLY GLU PRO SEQRES 7 B 501 PHE ASP ALA GLU ALA ALA ALA GLU ASN PHE ARG ALA VAL SEQRES 8 B 501 LEU ASP ASN ARG GLN ARG HIS ALA TRP LEU GLU LEU ALA SEQRES 9 B 501 ASN GLN ILE VAL ASP VAL LYS ALA LEU SER LYS THR GLU SEQRES 10 B 501 LEU GLN ILE THR LEU LYS SER ALA TYR TYR PRO PHE LEU SEQRES 11 B 501 GLN GLU LEU ALA LEU PRO ARG PRO PHE ARG PHE ILE ALA SEQRES 12 B 501 PRO SER GLN PHE LYS ASN HIS GLU THR MET ASN GLY ILE SEQRES 13 B 501 LYS ALA PRO ILE GLY THR GLY PRO TRP ILE LEU GLN GLU SEQRES 14 B 501 SER LYS LEU ASN GLN TYR ASP VAL PHE VAL ARG ASN GLU SEQRES 15 B 501 ASN TYR TRP GLY GLU LYS PRO ALA ILE LYS LYS ILE THR SEQRES 16 B 501 PHE ASN VAL ILE PRO ASP PRO THR THR ARG ALA VAL ALA SEQRES 17 B 501 PHE GLU THR GLY ASP ILE ASP LEU LEU TYR GLY ASN GLU SEQRES 18 B 501 GLY LEU LEU PRO LEU ASP THR PHE ALA ARG PHE SER GLN SEQRES 19 B 501 ASN PRO ALA TYR HIS THR GLN LEU SER GLN PRO ILE GLU SEQRES 20 B 501 THR VAL MET LEU ALA LEU ASN THR ALA LYS ALA PRO THR SEQRES 21 B 501 ASN GLU LEU ALA VAL ARG GLU ALA LEU ASN TYR ALA VAL SEQRES 22 B 501 ASN LYS LYS SER LEU ILE ASP ASN ALA LEU TYR GLY THR SEQRES 23 B 501 GLN GLN VAL ALA ASP THR LEU PHE ALA PRO SER VAL PRO SEQRES 24 B 501 TYR ALA ASN LEU GLY LEU LYS PRO SER GLN TYR ASP PRO SEQRES 25 B 501 GLN LYS ALA LYS ALA LEU LEU GLU LYS ALA GLY TRP THR SEQRES 26 B 501 LEU PRO ALA GLY LYS ASP ILE ARG GLU LYS ASN GLY GLN SEQRES 27 B 501 PRO LEU ARG ILE GLU LEU SER PHE ILE GLY THR ASP ALA SEQRES 28 B 501 LEU SER LYS SER MET ALA GLU ILE ILE GLN ALA ASP MET SEQRES 29 B 501 ARG GLN ILE GLY ALA ASP VAL SER LEU ILE GLY GLU GLU SEQRES 30 B 501 GLU SER SER ILE TYR ALA ARG GLN ARG ASP GLY ARG PHE SEQRES 31 B 501 GLY MET ILE PHE HIS ARG THR TRP GLY ALA PRO TYR ASP SEQRES 32 B 501 PRO HIS ALA PHE LEU SER SER MET ARG VAL PRO SER HIS SEQRES 33 B 501 ALA ASP PHE GLN ALA GLN GLN GLY LEU ALA ASP LYS PRO SEQRES 34 B 501 LEU ILE ASP LYS GLU ILE GLY GLU VAL LEU ALA THR HIS SEQRES 35 B 501 ASP GLU THR GLN ARG GLN ALA LEU TYR ARG ASP ILE LEU SEQRES 36 B 501 THR ARG LEU HIS ASP GLU ALA VAL TYR LEU PRO ILE SER SEQRES 37 B 501 TYR ILE SER MET MET VAL VAL SER LYS PRO GLU LEU GLY SEQRES 38 B 501 ASN ILE PRO TYR ALA PRO ILE ALA THR GLU ILE PRO PHE SEQRES 39 B 501 GLU GLN ILE LYS PRO VAL LYS HET ACT A 502 4 HET ACT A 503 4 HET ACT A 504 4 HET ACT A 505 4 HET ACT A 506 4 HET ACT A 507 4 HET ACT A 508 4 HET SO4 A 509 5 HET GOL A 510 6 HET GOL A 511 6 HET GOL A 512 6 HET GOL A 513 6 HET GOL A 514 6 HET GOL A 515 6 HET GOL A 516 6 HET CL A 517 1 HET CL A 518 1 HET CL A 519 1 HET BHR A 520 29 HET FE A 521 1 HET DTD A 522 8 HET CL A 523 1 HET GOL A 525 6 HET GOL A 526 6 HET GOL A 527 6 HET ACT B 502 4 HET ACT B 503 4 HET GOL B 504 6 HET CL B 505 1 HET BHR B 506 29 HET FE B 507 1 HET DTD B 508 8 HET GOL B 509 6 HET GOL B 510 6 HET ACT B 511 4 HET ACT B 512 4 HETNAM ACT ACETATE ION HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETNAM BHR 2-[2-[CARBOXYMETHYL-[(2-HYDROXYPHENYL) HETNAM 2 BHR METHYL]AMINO]ETHYL-[(2,3-DIHYDROXYPHENYL) HETNAM 3 BHR METHYL]AMINO]ETHANOIC ACID HETNAM FE FE (III) ION HETNAM DTD DITHIANE DIOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 ACT 11(C2 H3 O2 1-) FORMUL 10 SO4 O4 S 2- FORMUL 11 GOL 13(C3 H8 O3) FORMUL 18 CL 5(CL 1-) FORMUL 21 BHR 2(C20 H24 N2 O7) FORMUL 22 FE 2(FE 3+) FORMUL 23 DTD 2(C4 H8 O2 S2) FORMUL 39 HOH *722(H2 O) HELIX 1 1 GLN A 26 TYR A 34 1 9 HELIX 2 2 ASP A 80 ASP A 93 1 14 HELIX 3 3 ASN A 94 ALA A 99 5 6 HELIX 4 4 GLU A 102 GLN A 106 1 5 HELIX 5 5 PRO A 128 ALA A 134 1 7 HELIX 6 6 ALA A 143 SER A 145 5 3 HELIX 7 7 ASP A 201 THR A 211 1 11 HELIX 8 8 PRO A 225 ASN A 235 1 11 HELIX 9 9 GLU A 262 ALA A 272 1 11 HELIX 10 10 ASN A 274 LEU A 283 1 10 HELIX 11 11 ASP A 311 ALA A 322 1 12 HELIX 12 12 ASP A 350 GLN A 366 1 17 HELIX 13 13 GLU A 377 GLY A 388 1 12 HELIX 14 14 PRO A 404 SER A 410 1 7 HELIX 15 15 MET A 411 VAL A 413 5 3 HELIX 16 16 HIS A 416 GLN A 423 1 8 HELIX 17 17 ASP A 427 THR A 441 1 15 HELIX 18 18 ASP A 443 GLU A 461 1 19 HELIX 19 19 PRO A 478 GLY A 481 5 4 HELIX 20 20 PRO A 493 ILE A 497 5 5 HELIX 21 21 GLN B 26 TYR B 34 1 9 HELIX 22 22 ASP B 80 ASP B 93 1 14 HELIX 23 23 ASN B 94 ALA B 99 5 6 HELIX 24 24 LEU B 101 GLN B 106 1 6 HELIX 25 25 PRO B 128 ALA B 134 1 7 HELIX 26 26 ALA B 143 SER B 145 5 3 HELIX 27 27 ASP B 201 THR B 211 1 11 HELIX 28 28 PRO B 225 GLN B 234 1 10 HELIX 29 29 GLU B 262 VAL B 273 1 12 HELIX 30 30 ASN B 274 LEU B 283 1 10 HELIX 31 31 ASP B 311 ALA B 322 1 12 HELIX 32 32 ASP B 350 GLN B 366 1 17 HELIX 33 33 GLU B 377 GLY B 388 1 12 HELIX 34 34 PRO B 404 MET B 411 1 8 HELIX 35 35 HIS B 416 GLN B 422 1 7 HELIX 36 36 ASP B 427 THR B 441 1 15 HELIX 37 37 ASP B 443 GLU B 461 1 19 HELIX 38 38 PRO B 478 GLY B 481 5 4 HELIX 39 39 PRO B 493 ILE B 497 5 5 SHEET 1 A 4 GLU A 5 TRP A 10 0 SHEET 2 A 4 LYS A 193 VAL A 198 1 O THR A 195 N THR A 8 SHEET 3 A 4 TYR A 175 ARG A 180 -1 N ASP A 176 O PHE A 196 SHEET 4 A 4 TRP A 165 LYS A 171 -1 N GLN A 168 O VAL A 177 SHEET 1 B 2 VAL A 38 TYR A 40 0 SHEET 2 B 2 VAL A 46 PRO A 48 -1 O ILE A 47 N LYS A 39 SHEET 1 C 4 ALA A 51 HIS A 56 0 SHEET 2 C 4 THR A 62 LEU A 67 -1 O THR A 66 N SER A 53 SHEET 3 C 4 GLU A 117 LEU A 122 -1 O LEU A 118 N PHE A 65 SHEET 4 C 4 ILE A 107 ALA A 112 -1 N VAL A 108 O THR A 121 SHEET 1 D 2 PHE A 147 LYS A 148 0 SHEET 2 D 2 GLU A 151 ILE A 156 -1 O GLU A 151 N LYS A 148 SHEET 1 E 3 LEU A 216 GLY A 219 0 SHEET 2 E 3 TYR A 464 SER A 476 -1 O MET A 473 N GLY A 219 SHEET 3 E 3 GLN A 288 VAL A 289 -1 N GLN A 288 O TYR A 469 SHEET 1 F 6 LEU A 216 GLY A 219 0 SHEET 2 F 6 TYR A 464 SER A 476 -1 O MET A 473 N GLY A 219 SHEET 3 F 6 HIS A 239 LEU A 253 -1 N ILE A 246 O ILE A 470 SHEET 4 F 6 MET A 392 ARG A 396 -1 O HIS A 395 N MET A 250 SHEET 5 F 6 ARG A 341 ILE A 347 1 N GLU A 343 O MET A 392 SHEET 6 F 6 ASP A 370 GLU A 376 1 O ILE A 374 N LEU A 344 SHEET 1 G 2 GLU A 334 LYS A 335 0 SHEET 2 G 2 GLN A 338 PRO A 339 -1 O GLN A 338 N LYS A 335 SHEET 1 H 4 GLU B 5 TRP B 10 0 SHEET 2 H 4 LYS B 193 VAL B 198 1 O THR B 195 N THR B 8 SHEET 3 H 4 TYR B 175 ARG B 180 -1 N ASP B 176 O PHE B 196 SHEET 4 H 4 TRP B 165 LYS B 171 -1 N LYS B 171 O TYR B 175 SHEET 1 I 2 VAL B 38 TYR B 40 0 SHEET 2 I 2 VAL B 46 PRO B 48 -1 O ILE B 47 N LYS B 39 SHEET 1 J 4 ALA B 51 HIS B 56 0 SHEET 2 J 4 THR B 62 LEU B 67 -1 O THR B 64 N THR B 55 SHEET 3 J 4 GLU B 117 LEU B 122 -1 O ILE B 120 N TRP B 63 SHEET 4 J 4 ILE B 107 ALA B 112 -1 N VAL B 108 O THR B 121 SHEET 1 K 2 PHE B 147 LYS B 148 0 SHEET 2 K 2 GLU B 151 ILE B 156 -1 O GLU B 151 N LYS B 148 SHEET 1 L 3 LEU B 216 GLY B 219 0 SHEET 2 L 3 TYR B 464 SER B 476 -1 O MET B 473 N GLY B 219 SHEET 3 L 3 GLN B 288 VAL B 289 -1 N GLN B 288 O TYR B 469 SHEET 1 M 6 LEU B 216 GLY B 219 0 SHEET 2 M 6 TYR B 464 SER B 476 -1 O MET B 473 N GLY B 219 SHEET 3 M 6 HIS B 239 LEU B 253 -1 N ILE B 246 O ILE B 470 SHEET 4 M 6 MET B 392 ARG B 396 -1 O HIS B 395 N MET B 250 SHEET 5 M 6 ARG B 341 ILE B 347 1 N GLU B 343 O MET B 392 SHEET 6 M 6 ASP B 370 GLU B 376 1 O SER B 372 N LEU B 344 SHEET 1 N 2 GLU B 334 LYS B 335 0 SHEET 2 N 2 GLN B 338 PRO B 339 -1 O GLN B 338 N LYS B 335 LINK O21 BHR A 520 FE FE A 521 1555 1555 2.09 LINK O23 BHR A 520 FE FE A 521 1555 1555 2.12 LINK N8 BHR A 520 FE FE A 521 1555 1555 2.14 LINK N11 BHR A 520 FE FE A 521 1555 1555 2.25 LINK O6 BHR B 506 FE FE B 507 1555 1555 1.80 LINK O21 BHR B 506 FE FE B 507 1555 1555 2.07 LINK O23 BHR B 506 FE FE B 507 1555 1555 2.09 LINK N8 BHR B 506 FE FE B 507 1555 1555 2.20 LINK N11 BHR B 506 FE FE B 507 1555 1555 2.29 CISPEP 1 THR A 23 PRO A 24 0 3.89 CISPEP 2 ARG A 137 PRO A 138 0 6.19 CISPEP 3 ALA A 258 PRO A 259 0 -1.24 CISPEP 4 ALA A 328 GLY A 329 0 -23.96 CISPEP 5 ALA A 400 PRO A 401 0 -3.14 CISPEP 6 ASP A 403 PRO A 404 0 3.98 CISPEP 7 THR B 23 PRO B 24 0 6.14 CISPEP 8 ARG B 137 PRO B 138 0 6.47 CISPEP 9 ALA B 258 PRO B 259 0 -0.65 CISPEP 10 ALA B 400 PRO B 401 0 -1.93 CISPEP 11 ASP B 403 PRO B 404 0 0.40 SITE 1 AC1 7 ASN A 270 ASP A 291 HIS A 459 ALA A 462 SITE 2 AC1 7 TYR A 464 HOH A 568 HOH A 600 SITE 1 AC2 4 LYS A 52 ARG A 68 ASP A 69 ASP A 70 SITE 1 AC3 6 ASN A 302 GLY A 304 PHE B 229 ALA B 230 SITE 2 AC3 6 SER B 233 THR B 286 SITE 1 AC4 4 ASN A 261 GLU A 262 LEU A 263 GOL A 516 SITE 1 AC5 5 ASN A 235 ALA A 237 PHE A 419 GLN A 423 SITE 2 AC5 5 HOH A 676 SITE 1 AC6 2 ASN A 482 GLN A 496 SITE 1 AC7 5 GLN A 385 PHE A 394 HIS A 395 ARG A 396 SITE 2 AC7 5 HOH A 759 SITE 1 AC8 5 ARG A 384 ARG A 389 HOH A 811 LEU B 430 SITE 2 AC8 5 ARG B 457 SITE 1 AC9 6 ALA A 158 LEU A 167 GLN A 168 HOH A 599 SITE 2 AC9 6 THR B 211 ASP B 213 SITE 1 BC1 4 LYS A 148 ASN A 149 LYS A 157 HOH A 932 SITE 1 BC2 7 SER A 243 ILE A 246 MET A 472 TYR A 485 SITE 2 BC2 7 ALA A 486 HOH A 654 HOH A 743 SITE 1 BC3 5 LEU A 92 VAL A 108 ASP A 109 VAL A 110 SITE 2 BC3 5 ASN A 281 SITE 1 BC4 10 ARG A 68 ASP A 69 PRO A 78 PHE A 79 SITE 2 BC4 10 ASP A 80 LYS A 115 THR A 116 HOH A 606 SITE 3 BC4 10 HOH A 797 HOH A 860 SITE 1 BC5 6 GLU A 86 ARG A 89 PRO A 144 PHE A 147 SITE 2 BC5 6 HIS A 150 HOH A 830 SITE 1 BC6 8 THR A 255 ASN A 261 ARG A 266 GLY A 424 SITE 2 BC6 8 LEU A 425 ALA A 426 ACT A 505 HOH A 660 SITE 1 BC7 2 THR A 23 GLN A 26 SITE 1 BC8 2 ASP A 331 ARG A 365 SITE 1 BC9 2 ARG A 97 LYS B 314 SITE 1 CC1 11 TYR A 22 THR A 23 MET A 27 ARG A 97 SITE 2 CC1 11 TRP A 100 ARG A 137 TRP A 398 THR A 490 SITE 3 CC1 11 FE A 521 HOH A 582 HOH A 618 SITE 1 CC2 1 BHR A 520 SITE 1 CC3 6 TRP A 10 PRO A 11 ARG A 205 GLY A 219 SITE 2 CC3 6 ASN A 220 GLY A 222 SITE 1 CC4 1 TRP A 54 SITE 1 CC5 3 THR A 211 LYS A 433 HOH A 571 SITE 1 CC6 5 ASP A 453 THR A 456 ARG A 457 ASP A 460 SITE 2 CC6 5 HOH A 825 SITE 1 CC7 5 PHE A 229 ALA A 230 LEU A 242 THR A 286 SITE 2 CC7 5 ASN B 302 SITE 1 CC8 5 GLN B 385 HIS B 395 ARG B 396 HOH B 647 SITE 2 CC8 5 HOH B 851 SITE 1 CC9 6 ASN A 75 GLY A 76 THR B 203 PRO B 225 SITE 2 CC9 6 ASP B 227 THR B 228 SITE 1 DC1 4 SER B 243 ILE B 246 TYR B 485 HOH B 700 SITE 1 DC2 4 TRP B 10 MET B 27 PHE B 28 HOH B 640 SITE 1 DC3 9 TYR B 22 THR B 23 MET B 27 TRP B 100 SITE 2 DC3 9 ARG B 137 TRP B 398 THR B 490 FE B 507 SITE 3 DC3 9 HOH B 521 SITE 1 DC4 1 BHR B 506 SITE 1 DC5 6 TRP B 10 PRO B 11 ARG B 205 GLY B 219 SITE 2 DC5 6 ASN B 220 HOH B 793 SITE 1 DC6 6 SER B 31 ILE B 492 PRO B 493 GLU B 495 SITE 2 DC6 6 HOH B 572 HOH B 741 SITE 1 DC7 2 LEU B 167 GLN B 168 SITE 1 DC8 3 ARG B 89 ASP B 109 VAL B 110 SITE 1 DC9 4 GLU B 434 GLN B 446 LEU B 450 ASP B 453 CRYST1 87.040 93.873 124.726 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011489 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010653 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008018 0.00000