HEADER TRANSFERASE 14-MAY-10 3N0M TITLE CRYSTAL STRUCTURE OF BA2930 MUTANT (H183G) IN COMPLEX WITH ACCOA COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMINOGLYCOSIDE N3-ACETYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.3.1.81; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS ANTHRACIS; SOURCE 3 ORGANISM_TAXID: 198094; SOURCE 4 STRAIN: AMES; SOURCE 5 GENE: AACC7, BA_2930, GBAA2930, GBAA_2930; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS ACCOA, 2 ACYLTRANSFERASE, STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS OF INFECTIOUS DISEASES, CSGID, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.M.KLIMECKA,M.CHRUSZCZ,P.J.POREBSKI,M.CYMBOROWSKI,W.F.ANDERSON, AUTHOR 2 W.MINOR,CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES AUTHOR 3 (CSGID) REVDAT 6 22-NOV-23 3N0M 1 REMARK REVDAT 5 06-SEP-23 3N0M 1 REMARK REVDAT 4 13-APR-22 3N0M 1 AUTHOR JRNL REMARK SEQADV REVDAT 4 2 1 LINK REVDAT 3 03-AUG-11 3N0M 1 JRNL REVDAT 2 23-JUN-10 3N0M 1 REMARK REVDAT 1 09-JUN-10 3N0M 0 JRNL AUTH M.M.KLIMECKA,M.CHRUSZCZ,J.FONT,T.SKARINA,I.SHUMILIN, JRNL AUTH 2 O.ONOPRYIENKO,P.J.POREBSKI,M.CYMBOROWSKI,M.D.ZIMMERMAN, JRNL AUTH 3 J.HASSEMAN,I.J.GLOMSKI,L.LEBIODA,A.SAVCHENKO,A.EDWARDS, JRNL AUTH 4 W.MINOR JRNL TITL STRUCTURAL ANALYSIS OF A PUTATIVE AMINOGLYCOSIDE JRNL TITL 2 N-ACETYLTRANSFERASE FROM BACILLUS ANTHRACIS. JRNL REF J.MOL.BIOL. V. 410 411 2011 JRNL REFN ISSN 0022-2836 JRNL PMID 21601576 JRNL DOI 10.1016/J.JMB.2011.04.076 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0072 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 20256 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1094 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1417 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.94 REMARK 3 BIN R VALUE (WORKING SET) : 0.2890 REMARK 3 BIN FREE R VALUE SET COUNT : 77 REMARK 3 BIN FREE R VALUE : 0.3090 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4095 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 104 REMARK 3 SOLVENT ATOMS : 43 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 54.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.54000 REMARK 3 B22 (A**2) : 0.29000 REMARK 3 B33 (A**2) : 2.25000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.292 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.250 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 23.105 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4292 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2859 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5844 ; 1.649 ; 1.980 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6992 ; 4.150 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 528 ; 6.199 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 175 ;38.500 ;24.286 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 714 ;17.347 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 25 ;19.984 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 658 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4697 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 832 ; 0.007 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2638 ; 0.741 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1073 ; 0.000 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4279 ; 1.369 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1654 ; 2.685 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1565 ; 3.856 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 264 1 REMARK 3 1 B 1 B 264 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 3385 ; 0.120 ; 0.050 REMARK 3 TIGHT THERMAL 1 A (A**2): 3385 ; 0.160 ; 0.500 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 264 REMARK 3 ORIGIN FOR THE GROUP (A): -9.2912 10.0092 -21.5998 REMARK 3 T TENSOR REMARK 3 T11: 0.1684 T22: 0.4260 REMARK 3 T33: 0.3580 T12: 0.0047 REMARK 3 T13: 0.0040 T23: 0.2753 REMARK 3 L TENSOR REMARK 3 L11: 0.8658 L22: 1.6824 REMARK 3 L33: 2.7832 L12: -0.7035 REMARK 3 L13: -0.2280 L23: -0.4907 REMARK 3 S TENSOR REMARK 3 S11: 0.0332 S12: 0.3522 S13: 0.4606 REMARK 3 S21: -0.1065 S22: -0.1993 S23: -0.1880 REMARK 3 S31: -0.1409 S32: 0.3939 S33: 0.1661 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 264 REMARK 3 ORIGIN FOR THE GROUP (A): -5.1333 -7.7367 5.0546 REMARK 3 T TENSOR REMARK 3 T11: 0.0805 T22: 0.0773 REMARK 3 T33: 0.1889 T12: -0.0167 REMARK 3 T13: -0.0126 T23: 0.0001 REMARK 3 L TENSOR REMARK 3 L11: 1.3071 L22: 2.0852 REMARK 3 L33: 1.6578 L12: -0.8961 REMARK 3 L13: 0.3382 L23: -0.1350 REMARK 3 S TENSOR REMARK 3 S11: -0.0674 S12: -0.0032 S13: 0.4789 REMARK 3 S21: 0.1587 S22: -0.0474 S23: -0.1914 REMARK 3 S31: -0.1620 S32: 0.0040 S33: 0.1148 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3N0M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-MAY-10. REMARK 100 THE DEPOSITION ID IS D_1000059229. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-OCT-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21408 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : 0.08400 REMARK 200 FOR THE DATA SET : 23.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.54600 REMARK 200 R SYM FOR SHELL (I) : 0.54600 REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000, MOLREP REMARK 200 STARTING MODEL: 3KZL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.14 MOLAL MGCL2, 17% W/V PEG 3350, REMARK 280 0.1M HEPES, PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.42400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.29600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 55.30650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 66.29600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.42400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 55.30650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A 265 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 ASN B 265 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A -1 CG OD1 ND2 REMARK 470 LYS A 15 CD CE NZ REMARK 470 LYS A 78 CG CD CE NZ REMARK 470 LYS A 112 CD CE NZ REMARK 470 GLU A 193 CG CD OE1 OE2 REMARK 470 LYS A 196 CG CD CE NZ REMARK 470 ARG A 262 O REMARK 470 VAL B 5 CG1 CG2 REMARK 470 LYS B 15 CD CE NZ REMARK 470 LYS B 23 CG CD CE NZ REMARK 470 LYS B 78 CD CE NZ REMARK 470 ARG B 82 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 88 CG CD OE1 OE2 REMARK 470 LYS B 263 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 60 167.53 64.11 REMARK 500 ALA A 109 17.15 80.04 REMARK 500 ASN A 122 -4.41 72.07 REMARK 500 THR B 60 167.76 64.21 REMARK 500 SER B 81 -62.94 -120.31 REMARK 500 ARG B 82 -71.38 -38.69 REMARK 500 ASN B 122 -2.88 70.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ARG B 82 PRO B 83 149.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACO A 266 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 267 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACO B 266 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 267 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3KZL RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF BA2930 MUTANT (H183G) IN COMPLEX WITH ACCOA REMARK 900 RELATED ID: 3N0S RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF BA2930 MUTANT (H183A) IN COMPLEX WITH ACCOA REMARK 900 RELATED ID: IDP00044 RELATED DB: TARGETDB DBREF 3N0M A 1 265 UNP Q81P86 Q81P86_BACAN 1 265 DBREF 3N0M B 1 265 UNP Q81P86 Q81P86_BACAN 1 265 SEQADV 3N0M SER A -2 UNP Q81P86 EXPRESSION TAG SEQADV 3N0M ASN A -1 UNP Q81P86 EXPRESSION TAG SEQADV 3N0M ALA A 0 UNP Q81P86 EXPRESSION TAG SEQADV 3N0M GLY A 183 UNP Q81P86 HIS 183 ENGINEERED MUTATION SEQADV 3N0M SER B -2 UNP Q81P86 EXPRESSION TAG SEQADV 3N0M ASN B -1 UNP Q81P86 EXPRESSION TAG SEQADV 3N0M ALA B 0 UNP Q81P86 EXPRESSION TAG SEQADV 3N0M GLY B 183 UNP Q81P86 HIS 183 ENGINEERED MUTATION SEQRES 1 A 268 SER ASN ALA MSE ASN ASP ILE VAL ALA SER THR GLN LEU SEQRES 2 A 268 PRO ASN THR ILE LYS THR ILE THR ASN ASP LEU ARG LYS SEQRES 3 A 268 LEU GLY LEU LYS LYS GLY MSE THR VAL ILE VAL HIS SER SEQRES 4 A 268 SER LEU SER SER ILE GLY TRP ILE SER GLY GLY ALA VAL SEQRES 5 A 268 ALA VAL VAL GLU ALA LEU MSE GLU VAL ILE THR GLU GLU SEQRES 6 A 268 GLY THR ILE ILE MSE PRO THR GLN SER SER ASP LEU SER SEQRES 7 A 268 ASP PRO LYS HIS TRP SER ARG PRO PRO VAL PRO GLU GLU SEQRES 8 A 268 TRP TRP GLN ILE ILE ARG ASP ASN VAL PRO ALA PHE GLU SEQRES 9 A 268 PRO HIS ILE THR PRO THR ARG ALA MSE GLY LYS VAL VAL SEQRES 10 A 268 GLU CYS PHE ARG THR TYR PRO ASN VAL VAL ARG SER ASN SEQRES 11 A 268 HIS PRO LEU GLY SER PHE ALA ALA TRP GLY ARG HIS ALA SEQRES 12 A 268 GLU GLU ILE THR VAL ASN GLN SER LEU SER MSE SER LEU SEQRES 13 A 268 GLY GLU GLU SER PRO LEU ARG LYS ILE TYR ASP LEU ASP SEQRES 14 A 268 GLY TYR ILE LEU LEU ILE GLY VAL GLY TYR ASP SER ASN SEQRES 15 A 268 THR SER VAL GLY LEU SER GLU VAL ARG SER GLY ALA CYS SEQRES 16 A 268 GLU LEU ILE LYS VAL GLY ALA PRO ILE ILE GLU ASN GLY SEQRES 17 A 268 GLU ARG VAL TRP LYS GLU PHE VAL ASP MSE ASP TYR ASP SEQRES 18 A 268 SER ASP LYS PHE VAL GLU ILE GLY VAL GLU PHE GLU GLN SEQRES 19 A 268 LYS GLY THR VAL THR MSE GLY LYS ILE GLY ASN ALA LYS SEQRES 20 A 268 CYS ARG LEU MSE LYS GLN ARG ASP ILE VAL ASP PHE GLY SEQRES 21 A 268 THR GLU TRP PHE ARG LYS LYS ASN SEQRES 1 B 268 SER ASN ALA MSE ASN ASP ILE VAL ALA SER THR GLN LEU SEQRES 2 B 268 PRO ASN THR ILE LYS THR ILE THR ASN ASP LEU ARG LYS SEQRES 3 B 268 LEU GLY LEU LYS LYS GLY MSE THR VAL ILE VAL HIS SER SEQRES 4 B 268 SER LEU SER SER ILE GLY TRP ILE SER GLY GLY ALA VAL SEQRES 5 B 268 ALA VAL VAL GLU ALA LEU MSE GLU VAL ILE THR GLU GLU SEQRES 6 B 268 GLY THR ILE ILE MSE PRO THR GLN SER SER ASP LEU SER SEQRES 7 B 268 ASP PRO LYS HIS TRP SER ARG PRO PRO VAL PRO GLU GLU SEQRES 8 B 268 TRP TRP GLN ILE ILE ARG ASP ASN VAL PRO ALA PHE GLU SEQRES 9 B 268 PRO HIS ILE THR PRO THR ARG ALA MSE GLY LYS VAL VAL SEQRES 10 B 268 GLU CYS PHE ARG THR TYR PRO ASN VAL VAL ARG SER ASN SEQRES 11 B 268 HIS PRO LEU GLY SER PHE ALA ALA TRP GLY ARG HIS ALA SEQRES 12 B 268 GLU GLU ILE THR VAL ASN GLN SER LEU SER MSE SER LEU SEQRES 13 B 268 GLY GLU GLU SER PRO LEU ARG LYS ILE TYR ASP LEU ASP SEQRES 14 B 268 GLY TYR ILE LEU LEU ILE GLY VAL GLY TYR ASP SER ASN SEQRES 15 B 268 THR SER VAL GLY LEU SER GLU VAL ARG SER GLY ALA CYS SEQRES 16 B 268 GLU LEU ILE LYS VAL GLY ALA PRO ILE ILE GLU ASN GLY SEQRES 17 B 268 GLU ARG VAL TRP LYS GLU PHE VAL ASP MSE ASP TYR ASP SEQRES 18 B 268 SER ASP LYS PHE VAL GLU ILE GLY VAL GLU PHE GLU GLN SEQRES 19 B 268 LYS GLY THR VAL THR MSE GLY LYS ILE GLY ASN ALA LYS SEQRES 20 B 268 CYS ARG LEU MSE LYS GLN ARG ASP ILE VAL ASP PHE GLY SEQRES 21 B 268 THR GLU TRP PHE ARG LYS LYS ASN MODRES 3N0M MSE A 1 MET SELENOMETHIONINE MODRES 3N0M MSE A 30 MET SELENOMETHIONINE MODRES 3N0M MSE A 56 MET SELENOMETHIONINE MODRES 3N0M MSE A 67 MET SELENOMETHIONINE MODRES 3N0M MSE A 110 MET SELENOMETHIONINE MODRES 3N0M MSE A 151 MET SELENOMETHIONINE MODRES 3N0M MSE A 215 MET SELENOMETHIONINE MODRES 3N0M MSE A 237 MET SELENOMETHIONINE MODRES 3N0M MSE A 248 MET SELENOMETHIONINE MODRES 3N0M MSE B 1 MET SELENOMETHIONINE MODRES 3N0M MSE B 30 MET SELENOMETHIONINE MODRES 3N0M MSE B 56 MET SELENOMETHIONINE MODRES 3N0M MSE B 67 MET SELENOMETHIONINE MODRES 3N0M MSE B 110 MET SELENOMETHIONINE MODRES 3N0M MSE B 151 MET SELENOMETHIONINE MODRES 3N0M MSE B 215 MET SELENOMETHIONINE MODRES 3N0M MSE B 237 MET SELENOMETHIONINE MODRES 3N0M MSE B 248 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 30 8 HET MSE A 56 8 HET MSE A 67 8 HET MSE A 110 8 HET MSE A 151 8 HET MSE A 215 8 HET MSE A 237 8 HET MSE A 248 8 HET MSE B 1 8 HET MSE B 30 8 HET MSE B 56 8 HET MSE B 67 8 HET MSE B 110 8 HET MSE B 151 8 HET MSE B 215 8 HET MSE B 237 8 HET MSE B 248 8 HET ACO A 266 51 HET CL A 267 1 HET ACO B 266 51 HET CL B 267 1 HETNAM MSE SELENOMETHIONINE HETNAM ACO ACETYL COENZYME *A HETNAM CL CHLORIDE ION FORMUL 1 MSE 18(C5 H11 N O2 SE) FORMUL 3 ACO 2(C23 H38 N7 O17 P3 S) FORMUL 4 CL 2(CL 1-) FORMUL 7 HOH *43(H2 O) HELIX 1 1 ASN A -1 SER A 7 1 9 HELIX 2 2 THR A 13 GLY A 25 1 13 HELIX 3 3 LEU A 38 GLY A 42 5 5 HELIX 4 4 GLY A 46 THR A 60 1 15 HELIX 5 5 SER A 71 SER A 75 5 5 HELIX 6 6 ASP A 76 TRP A 80 5 5 HELIX 7 7 PRO A 86 VAL A 97 1 12 HELIX 8 8 GLY A 111 TYR A 120 1 10 HELIX 9 9 HIS A 139 VAL A 145 1 7 HELIX 10 10 SER A 157 LEU A 165 1 9 HELIX 11 11 GLY A 175 THR A 180 5 6 HELIX 12 12 SER A 181 GLY A 190 1 10 HELIX 13 13 ASP A 218 ASP A 220 5 3 HELIX 14 14 LYS A 221 GLN A 231 1 11 HELIX 15 15 GLN A 250 ARG A 262 1 13 HELIX 16 16 MSE B 1 SER B 7 1 7 HELIX 17 17 THR B 13 GLY B 25 1 13 HELIX 18 18 LEU B 38 GLY B 42 5 5 HELIX 19 19 GLY B 46 THR B 60 1 15 HELIX 20 20 SER B 71 SER B 75 5 5 HELIX 21 21 ASP B 76 TRP B 80 5 5 HELIX 22 22 PRO B 86 VAL B 97 1 12 HELIX 23 23 GLY B 111 TYR B 120 1 10 HELIX 24 24 HIS B 139 VAL B 145 1 7 HELIX 25 25 SER B 157 LEU B 165 1 9 HELIX 26 26 GLY B 175 THR B 180 5 6 HELIX 27 27 SER B 181 GLY B 190 1 10 HELIX 28 28 ASP B 218 ASP B 220 5 3 HELIX 29 29 LYS B 221 GLN B 231 1 11 HELIX 30 30 GLN B 250 LYS B 264 1 15 SHEET 1 A 7 VAL A 124 ARG A 125 0 SHEET 2 A 7 PHE A 133 GLY A 137 -1 O ALA A 135 N VAL A 124 SHEET 3 A 7 THR A 64 PRO A 68 -1 N MSE A 67 O ALA A 134 SHEET 4 A 7 THR A 31 SER A 36 1 N VAL A 32 O THR A 64 SHEET 5 A 7 TYR A 168 ILE A 172 1 O TYR A 168 N THR A 31 SHEET 6 A 7 ALA A 243 LYS A 249 -1 O ARG A 246 N LEU A 171 SHEET 7 A 7 THR A 236 ILE A 240 -1 N THR A 236 O LEU A 247 SHEET 1 B 2 LEU A 194 ILE A 202 0 SHEET 2 B 2 ARG A 207 MSE A 215 -1 O PHE A 212 N VAL A 197 SHEET 1 C 7 VAL B 124 ARG B 125 0 SHEET 2 C 7 PHE B 133 GLY B 137 -1 O ALA B 135 N VAL B 124 SHEET 3 C 7 THR B 64 PRO B 68 -1 N MSE B 67 O ALA B 134 SHEET 4 C 7 THR B 31 SER B 36 1 N VAL B 32 O ILE B 66 SHEET 5 C 7 TYR B 168 ILE B 172 1 O ILE B 172 N HIS B 35 SHEET 6 C 7 ALA B 243 LYS B 249 -1 O ARG B 246 N LEU B 171 SHEET 7 C 7 THR B 236 ILE B 240 -1 N THR B 236 O LEU B 247 SHEET 1 D 2 LEU B 194 ILE B 202 0 SHEET 2 D 2 ARG B 207 MSE B 215 -1 O PHE B 212 N VAL B 197 LINK C ALA A 0 N MSE A 1 1555 1555 1.31 LINK C MSE A 1 N ASN A 2 1555 1555 1.34 LINK C GLY A 29 N MSE A 30 1555 1555 1.33 LINK C MSE A 30 N THR A 31 1555 1555 1.33 LINK C LEU A 55 N MSE A 56 1555 1555 1.31 LINK C MSE A 56 N GLU A 57 1555 1555 1.31 LINK C ILE A 66 N MSE A 67 1555 1555 1.34 LINK C MSE A 67 N PRO A 68 1555 1555 1.35 LINK C ALA A 109 N MSE A 110 1555 1555 1.33 LINK C MSE A 110 N GLY A 111 1555 1555 1.33 LINK C SER A 150 N MSE A 151 1555 1555 1.33 LINK C MSE A 151 N SER A 152 1555 1555 1.32 LINK C ASP A 214 N MSE A 215 1555 1555 1.33 LINK C MSE A 215 N ASP A 216 1555 1555 1.33 LINK C THR A 236 N MSE A 237 1555 1555 1.32 LINK C MSE A 237 N GLY A 238 1555 1555 1.32 LINK C LEU A 247 N MSE A 248 1555 1555 1.32 LINK C MSE A 248 N LYS A 249 1555 1555 1.32 LINK C MSE B 1 N ASN B 2 1555 1555 1.34 LINK C GLY B 29 N MSE B 30 1555 1555 1.31 LINK C MSE B 30 N THR B 31 1555 1555 1.32 LINK C LEU B 55 N MSE B 56 1555 1555 1.33 LINK C MSE B 56 N GLU B 57 1555 1555 1.31 LINK C ILE B 66 N MSE B 67 1555 1555 1.33 LINK C MSE B 67 N PRO B 68 1555 1555 1.35 LINK C ALA B 109 N MSE B 110 1555 1555 1.32 LINK C MSE B 110 N GLY B 111 1555 1555 1.34 LINK C SER B 150 N MSE B 151 1555 1555 1.32 LINK C MSE B 151 N SER B 152 1555 1555 1.32 LINK C ASP B 214 N MSE B 215 1555 1555 1.33 LINK C MSE B 215 N ASP B 216 1555 1555 1.34 LINK C THR B 236 N MSE B 237 1555 1555 1.33 LINK C MSE B 237 N GLY B 238 1555 1555 1.31 LINK C LEU B 247 N MSE B 248 1555 1555 1.32 LINK C MSE B 248 N LYS B 249 1555 1555 1.32 SITE 1 AC1 21 MSE A 1 HIS A 35 SER A 36 SER A 37 SITE 2 AC1 21 LEU A 38 SER A 39 GLY A 42 TRP A 43 SITE 3 AC1 21 ILE A 44 GLY A 47 GLN A 70 ALA A 109 SITE 4 AC1 21 MSE A 110 GLY A 111 LYS A 112 VAL A 174 SITE 5 AC1 21 ASP A 177 SER A 178 THR A 180 PHE A 222 SITE 6 AC1 21 HOH A 269 SITE 1 AC2 2 ARG A 262 ARG B 262 SITE 1 AC3 17 MSE B 1 HIS B 35 SER B 36 SER B 37 SITE 2 AC3 17 LEU B 38 SER B 39 GLY B 42 ILE B 44 SITE 3 AC3 17 GLY B 47 PRO B 68 MSE B 110 GLY B 111 SITE 4 AC3 17 LYS B 112 VAL B 174 ASP B 177 SER B 178 SITE 5 AC3 17 THR B 180 SITE 1 AC4 2 MSE B 30 THR B 31 CRYST1 36.848 110.613 132.592 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027139 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009041 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007542 0.00000