HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 20-MAY-10 3N3T TITLE CRYSTAL STRUCTURE OF PUTATIVE DIGUANYLATE CYCLASE/PHOSPHODIESTERASE TITLE 2 COMPLEX WITH CYCLIC DI-GMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE DIGUANYLATE CYCLASE/PHOSPHODIESTERASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THIOBACILLUS DENITRIFICANS; SOURCE 3 ORGANISM_TAXID: 292415; SOURCE 4 STRAIN: ATCC 25259; SOURCE 5 GENE: TBD_1265; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) DERIVATIVE; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET DERIVATIVE KEYWDS GGDEF & EAL DOMAINS, STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, UNKNOWN KEYWDS 3 FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR C.CHANG,X.XU,H.CUI,A.SAVCHENKO,A.EDWARDS,A.JOACHIMIAK,MIDWEST CENTER AUTHOR 2 FOR STRUCTURAL GENOMICS (MCSG) REVDAT 4 16-OCT-24 3N3T 1 REMARK SEQADV HETSYN LINK REVDAT 3 08-NOV-17 3N3T 1 REMARK REVDAT 2 24-OCT-12 3N3T 1 JRNL VERSN REVDAT 1 16-JUN-10 3N3T 0 SPRSDE 16-JUN-10 3N3T 3II8 JRNL AUTH A.TCHIGVINTSEV,X.XU,A.SINGER,C.CHANG,G.BROWN,M.PROUDFOOT, JRNL AUTH 2 H.CUI,R.FLICK,W.F.ANDERSON,A.JOACHIMIAK,M.Y.GALPERIN, JRNL AUTH 3 A.SAVCHENKO,A.F.YAKUNIN JRNL TITL STRUCTURAL INSIGHT INTO THE MECHANISM OF C-DI-GMP HYDROLYSIS JRNL TITL 2 BY EAL DOMAIN PHOSPHODIESTERASES. JRNL REF J.MOL.BIOL. V. 402 524 2010 JRNL REFN ISSN 0022-2836 JRNL PMID 20691189 JRNL DOI 10.1016/J.JMB.2010.07.050 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 23047 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1239 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.41 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1612 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.10 REMARK 3 BIN R VALUE (WORKING SET) : 0.2000 REMARK 3 BIN FREE R VALUE SET COUNT : 93 REMARK 3 BIN FREE R VALUE : 0.2830 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4000 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 97 REMARK 3 SOLVENT ATOMS : 225 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.76 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.92000 REMARK 3 B22 (A**2) : -2.10000 REMARK 3 B33 (A**2) : -2.82000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.265 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.184 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 17.135 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.919 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4218 ; 0.014 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5744 ; 1.537 ; 1.997 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 529 ; 5.580 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 192 ;35.672 ;23.177 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 696 ;17.082 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 46 ;17.546 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 663 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3176 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2612 ; 0.953 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4177 ; 1.766 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1606 ; 2.902 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1566 ; 4.651 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 4218 ; 1.502 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 489 A 503 REMARK 3 ORIGIN FOR THE GROUP (A): 16.2100 39.5033 33.9521 REMARK 3 T TENSOR REMARK 3 T11: 0.0892 T22: 0.1206 REMARK 3 T33: 0.0446 T12: -0.0207 REMARK 3 T13: 0.0288 T23: -0.0186 REMARK 3 L TENSOR REMARK 3 L11: 10.1491 L22: 3.6077 REMARK 3 L33: 4.9178 L12: -4.3838 REMARK 3 L13: -0.4177 L23: 0.3529 REMARK 3 S TENSOR REMARK 3 S11: 0.2023 S12: -0.2148 S13: 0.3567 REMARK 3 S21: -0.1029 S22: 0.1150 S23: -0.2497 REMARK 3 S31: -0.4478 S32: 0.4842 S33: -0.3172 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 504 A 527 REMARK 3 ORIGIN FOR THE GROUP (A): -6.0849 39.6433 48.3394 REMARK 3 T TENSOR REMARK 3 T11: 0.0628 T22: 0.0580 REMARK 3 T33: 0.0562 T12: -0.0017 REMARK 3 T13: -0.0117 T23: -0.0073 REMARK 3 L TENSOR REMARK 3 L11: 2.8100 L22: 0.9165 REMARK 3 L33: 2.4758 L12: -0.0521 REMARK 3 L13: -1.6882 L23: -0.3338 REMARK 3 S TENSOR REMARK 3 S11: -0.1158 S12: 0.0639 S13: -0.0405 REMARK 3 S21: -0.0070 S22: 0.0775 S23: 0.1130 REMARK 3 S31: -0.0394 S32: -0.1658 S33: 0.0383 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 528 A 547 REMARK 3 ORIGIN FOR THE GROUP (A): 10.4110 33.4213 38.9283 REMARK 3 T TENSOR REMARK 3 T11: 0.0902 T22: 0.0613 REMARK 3 T33: 0.1006 T12: 0.0030 REMARK 3 T13: -0.0113 T23: 0.0309 REMARK 3 L TENSOR REMARK 3 L11: 4.4608 L22: 4.9949 REMARK 3 L33: 4.8897 L12: 0.5175 REMARK 3 L13: -0.7090 L23: 1.6079 REMARK 3 S TENSOR REMARK 3 S11: 0.0769 S12: 0.0381 S13: -0.2564 REMARK 3 S21: 0.0629 S22: -0.1036 S23: -0.4356 REMARK 3 S31: 0.0013 S32: 0.1539 S33: 0.0267 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 548 A 663 REMARK 3 ORIGIN FOR THE GROUP (A): 5.3762 47.3214 54.6597 REMARK 3 T TENSOR REMARK 3 T11: 0.0945 T22: 0.0295 REMARK 3 T33: 0.0188 T12: -0.0309 REMARK 3 T13: -0.0195 T23: -0.0048 REMARK 3 L TENSOR REMARK 3 L11: 0.8189 L22: 1.7157 REMARK 3 L33: 2.1451 L12: -0.2135 REMARK 3 L13: 0.2334 L23: -1.1279 REMARK 3 S TENSOR REMARK 3 S11: -0.0212 S12: -0.0485 S13: 0.0477 REMARK 3 S21: 0.1206 S22: -0.0612 S23: -0.1089 REMARK 3 S31: -0.3425 S32: 0.1913 S33: 0.0824 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 664 A 743 REMARK 3 ORIGIN FOR THE GROUP (A): -7.7576 32.2344 58.3616 REMARK 3 T TENSOR REMARK 3 T11: 0.0435 T22: 0.0410 REMARK 3 T33: 0.0639 T12: 0.0001 REMARK 3 T13: 0.0108 T23: -0.0074 REMARK 3 L TENSOR REMARK 3 L11: 1.2394 L22: 0.6795 REMARK 3 L33: 3.5126 L12: -0.1663 REMARK 3 L13: 1.3864 L23: -0.6273 REMARK 3 S TENSOR REMARK 3 S11: 0.0188 S12: -0.0565 S13: -0.1271 REMARK 3 S21: -0.0069 S22: -0.0306 S23: 0.1225 REMARK 3 S31: 0.1674 S32: -0.1379 S33: 0.0118 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 489 B 503 REMARK 3 ORIGIN FOR THE GROUP (A): 35.2139 28.2323 94.2143 REMARK 3 T TENSOR REMARK 3 T11: 0.0275 T22: 0.1079 REMARK 3 T33: 0.2870 T12: 0.0353 REMARK 3 T13: -0.0502 T23: -0.1480 REMARK 3 L TENSOR REMARK 3 L11: 17.6004 L22: 17.3030 REMARK 3 L33: 27.5831 L12: 0.3437 REMARK 3 L13: -11.6748 L23: -18.7452 REMARK 3 S TENSOR REMARK 3 S11: 0.2662 S12: -0.6071 S13: 0.5367 REMARK 3 S21: -0.3068 S22: -0.4020 S23: -0.5049 REMARK 3 S31: 0.1743 S32: 0.8554 S33: 0.1358 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 504 B 527 REMARK 3 ORIGIN FOR THE GROUP (A): 9.8291 29.9797 98.5135 REMARK 3 T TENSOR REMARK 3 T11: 0.0437 T22: 0.0947 REMARK 3 T33: 0.0368 T12: -0.0062 REMARK 3 T13: -0.0065 T23: -0.0129 REMARK 3 L TENSOR REMARK 3 L11: 4.2215 L22: 1.2247 REMARK 3 L33: 1.5314 L12: -0.0011 REMARK 3 L13: -0.0127 L23: -0.6868 REMARK 3 S TENSOR REMARK 3 S11: -0.0999 S12: -0.0500 S13: 0.1108 REMARK 3 S21: 0.1606 S22: 0.0869 S23: 0.0278 REMARK 3 S31: 0.0189 S32: -0.0624 S33: 0.0131 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 528 B 547 REMARK 3 ORIGIN FOR THE GROUP (A): 28.6139 34.9961 93.5578 REMARK 3 T TENSOR REMARK 3 T11: 0.0497 T22: 0.1825 REMARK 3 T33: 0.2813 T12: -0.0840 REMARK 3 T13: -0.0097 T23: -0.0348 REMARK 3 L TENSOR REMARK 3 L11: 4.3192 L22: 7.2232 REMARK 3 L33: 8.1729 L12: -3.4278 REMARK 3 L13: -2.9134 L23: 1.2657 REMARK 3 S TENSOR REMARK 3 S11: 0.0520 S12: -0.1242 S13: 0.5017 REMARK 3 S21: 0.0263 S22: 0.1245 S23: -0.8316 REMARK 3 S31: -0.5205 S32: 0.6918 S33: -0.1764 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 548 B 663 REMARK 3 ORIGIN FOR THE GROUP (A): 14.0465 20.9555 86.8575 REMARK 3 T TENSOR REMARK 3 T11: 0.0172 T22: 0.0483 REMARK 3 T33: 0.0583 T12: -0.0092 REMARK 3 T13: -0.0046 T23: 0.0144 REMARK 3 L TENSOR REMARK 3 L11: 0.7531 L22: 1.3871 REMARK 3 L33: 1.7411 L12: -0.2875 REMARK 3 L13: 0.4755 L23: 0.0405 REMARK 3 S TENSOR REMARK 3 S11: 0.0197 S12: 0.0802 S13: -0.0857 REMARK 3 S21: -0.0262 S22: -0.0096 S23: -0.0624 REMARK 3 S31: 0.1456 S32: 0.0478 S33: -0.0102 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 664 B 743 REMARK 3 ORIGIN FOR THE GROUP (A): 2.6449 36.9678 91.5197 REMARK 3 T TENSOR REMARK 3 T11: 0.0143 T22: 0.0696 REMARK 3 T33: 0.0576 T12: 0.0198 REMARK 3 T13: -0.0172 T23: -0.0117 REMARK 3 L TENSOR REMARK 3 L11: 0.5892 L22: 0.6333 REMARK 3 L33: 2.5948 L12: 0.0544 REMARK 3 L13: 0.4635 L23: -0.0665 REMARK 3 S TENSOR REMARK 3 S11: -0.0493 S12: -0.1512 S13: 0.1008 REMARK 3 S21: -0.0206 S22: 0.0024 S23: 0.0624 REMARK 3 S31: -0.1494 S32: -0.1934 S33: 0.0469 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3N3T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-MAY-10. REMARK 100 THE DEPOSITION ID IS D_1000059344. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-APR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97940 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24433 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 34.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.37 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 0.45900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.190 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000, SHELXD, MLPHARE, DM, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUM CHLORIDE, 25% PEG3350, REMARK 280 0.1M BIS-TRIS, 2.5MM CYCLIC DI-GMP, PH 6.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.78000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 86.99350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.60050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 86.99350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.78000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.60050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -59.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 465 REMARK 465 GLY A 466 REMARK 465 SER A 467 REMARK 465 SER A 468 REMARK 465 HIS A 469 REMARK 465 HIS A 470 REMARK 465 HIS A 471 REMARK 465 HIS A 472 REMARK 465 HIS A 473 REMARK 465 HIS A 474 REMARK 465 SER A 475 REMARK 465 SER A 476 REMARK 465 GLY A 477 REMARK 465 ARG A 478 REMARK 465 GLU A 479 REMARK 465 ASN A 480 REMARK 465 LEU A 481 REMARK 465 TYR A 482 REMARK 465 PHE A 483 REMARK 465 GLN A 484 REMARK 465 GLY A 485 REMARK 465 HIS A 486 REMARK 465 GLY A 747 REMARK 465 GLN A 748 REMARK 465 ARG A 749 REMARK 465 PRO A 750 REMARK 465 VAL A 751 REMARK 465 HIS A 752 REMARK 465 GLY A 753 REMARK 465 HIS A 754 REMARK 465 GLU A 755 REMARK 465 THR A 756 REMARK 465 ALA A 757 REMARK 465 PRO A 758 REMARK 465 MSE B 465 REMARK 465 GLY B 466 REMARK 465 SER B 467 REMARK 465 SER B 468 REMARK 465 HIS B 469 REMARK 465 HIS B 470 REMARK 465 HIS B 471 REMARK 465 HIS B 472 REMARK 465 HIS B 473 REMARK 465 HIS B 474 REMARK 465 SER B 475 REMARK 465 SER B 476 REMARK 465 GLY B 477 REMARK 465 ARG B 478 REMARK 465 GLU B 479 REMARK 465 ASN B 480 REMARK 465 LEU B 481 REMARK 465 TYR B 482 REMARK 465 PHE B 483 REMARK 465 GLN B 484 REMARK 465 GLY B 485 REMARK 465 GLY B 747 REMARK 465 GLN B 748 REMARK 465 ARG B 749 REMARK 465 PRO B 750 REMARK 465 VAL B 751 REMARK 465 HIS B 752 REMARK 465 GLY B 753 REMARK 465 HIS B 754 REMARK 465 GLU B 755 REMARK 465 THR B 756 REMARK 465 ALA B 757 REMARK 465 PRO B 758 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 487 CG CD OE1 OE2 REMARK 470 ASP A 547 CG OD1 OD2 REMARK 470 ARG A 637 CG CD NE CZ NH1 NH2 REMARK 470 SER A 746 OG REMARK 470 HIS B 486 CG ND1 CD2 CE1 NE2 REMARK 470 GLU B 487 CG CD OE1 OE2 REMARK 470 ARG B 488 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 489 CG CD1 CD2 REMARK 470 THR B 490 OG1 CG2 REMARK 470 LEU B 491 CG CD1 CD2 REMARK 470 ASP B 492 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 186 O HOH B 190 1.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 620 2.06 -68.37 REMARK 500 PRO A 662 41.78 -86.41 REMARK 500 SER A 728 130.49 179.10 REMARK 500 SER B 728 129.41 -173.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 802 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 1 O REMARK 620 2 GLU A 523 OE2 81.3 REMARK 620 3 ASN A 584 OD1 170.3 98.0 REMARK 620 4 GLU A 616 OE1 79.3 83.1 91.0 REMARK 620 5 ASP A 646 OD2 90.6 162.5 87.3 80.2 REMARK 620 6 C2E A 801 O11 88.0 91.7 101.8 166.8 103.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 803 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 24 O REMARK 620 2 ASP A 646 OD1 148.4 REMARK 620 3 ASP A 647 OD1 107.5 102.6 REMARK 620 4 GLU A 703 OE1 74.9 73.5 161.8 REMARK 620 5 C2E A 801 O21 91.0 99.6 87.7 110.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 803 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 206 O REMARK 620 2 ASP B 646 OD1 150.0 REMARK 620 3 ASP B 647 OD1 73.3 83.3 REMARK 620 4 GLU B 703 OE2 80.6 83.9 97.0 REMARK 620 5 GLU B 703 OE1 82.5 111.6 149.4 60.2 REMARK 620 6 C2E B 801 O21 91.8 106.4 88.5 168.9 111.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 802 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 209 O REMARK 620 2 GLU B 523 OE2 86.0 REMARK 620 3 ASN B 584 OD1 177.2 94.6 REMARK 620 4 GLU B 616 OE1 92.6 89.2 84.7 REMARK 620 5 ASP B 646 OD2 102.6 171.3 76.8 91.8 REMARK 620 6 C2E B 801 O11 92.9 84.7 89.8 171.5 93.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C2E A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 804 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C2E B 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 803 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2R6O RELATED DB: PDB REMARK 900 APO-PROTEIN REMARK 900 RELATED ID: APC7542 RELATED DB: TARGETDB DBREF 3N3T A 487 758 UNP Q3SJE6 Q3SJE6_THIDA 487 758 DBREF 3N3T B 487 758 UNP Q3SJE6 Q3SJE6_THIDA 487 758 SEQADV 3N3T MSE A 465 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T GLY A 466 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T SER A 467 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T SER A 468 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T HIS A 469 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T HIS A 470 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T HIS A 471 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T HIS A 472 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T HIS A 473 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T HIS A 474 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T SER A 475 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T SER A 476 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T GLY A 477 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T ARG A 478 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T GLU A 479 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T ASN A 480 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T LEU A 481 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T TYR A 482 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T PHE A 483 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T GLN A 484 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T GLY A 485 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T HIS A 486 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T MSE B 465 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T GLY B 466 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T SER B 467 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T SER B 468 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T HIS B 469 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T HIS B 470 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T HIS B 471 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T HIS B 472 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T HIS B 473 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T HIS B 474 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T SER B 475 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T SER B 476 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T GLY B 477 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T ARG B 478 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T GLU B 479 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T ASN B 480 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T LEU B 481 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T TYR B 482 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T PHE B 483 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T GLN B 484 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T GLY B 485 UNP Q3SJE6 EXPRESSION TAG SEQADV 3N3T HIS B 486 UNP Q3SJE6 EXPRESSION TAG SEQRES 1 A 294 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 294 ARG GLU ASN LEU TYR PHE GLN GLY HIS GLU ARG LEU THR SEQRES 3 A 294 LEU ASP THR ARG LEU ARG GLN ALA LEU GLU ARG ASN GLU SEQRES 4 A 294 LEU VAL LEU HIS TYR GLN PRO ILE VAL GLU LEU ALA SER SEQRES 5 A 294 GLY ARG ILE VAL GLY GLY GLU ALA LEU VAL ARG TRP GLU SEQRES 6 A 294 ASP PRO GLU ARG GLY LEU VAL MSE PRO SER ALA PHE ILE SEQRES 7 A 294 PRO ALA ALA GLU ASP THR GLY LEU ILE VAL ALA LEU SER SEQRES 8 A 294 ASP TRP VAL LEU GLU ALA CYS CYS THR GLN LEU ARG ALA SEQRES 9 A 294 TRP GLN GLN GLN GLY ARG ALA ALA ASP ASP LEU THR LEU SEQRES 10 A 294 SER VAL ASN ILE SER THR ARG GLN PHE GLU GLY GLU HIS SEQRES 11 A 294 LEU THR ARG ALA VAL ASP ARG ALA LEU ALA ARG SER GLY SEQRES 12 A 294 LEU ARG PRO ASP CYS LEU GLU LEU GLU ILE THR GLU ASN SEQRES 13 A 294 VAL MSE LEU VAL MSE THR ASP GLU VAL ARG THR CYS LEU SEQRES 14 A 294 ASP ALA LEU ARG ALA ARG GLY VAL ARG LEU ALA LEU ASP SEQRES 15 A 294 ASP PHE GLY THR GLY TYR SER SER LEU SER TYR LEU SER SEQRES 16 A 294 GLN LEU PRO PHE HIS GLY LEU LYS ILE ASP GLN SER PHE SEQRES 17 A 294 VAL ARG LYS ILE PRO ALA HIS PRO SER GLU THR GLN ILE SEQRES 18 A 294 VAL THR THR ILE LEU ALA LEU ALA ARG GLY LEU GLY MSE SEQRES 19 A 294 GLU VAL VAL ALA GLU GLY ILE GLU THR ALA GLN GLN TYR SEQRES 20 A 294 ALA PHE LEU ARG ASP ARG GLY CYS GLU PHE GLY GLN GLY SEQRES 21 A 294 ASN LEU MSE SER THR PRO GLN ALA ALA ASP ALA PHE ALA SEQRES 22 A 294 SER LEU LEU ASP ARG GLN LYS ALA SER GLY GLN ARG PRO SEQRES 23 A 294 VAL HIS GLY HIS GLU THR ALA PRO SEQRES 1 B 294 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 294 ARG GLU ASN LEU TYR PHE GLN GLY HIS GLU ARG LEU THR SEQRES 3 B 294 LEU ASP THR ARG LEU ARG GLN ALA LEU GLU ARG ASN GLU SEQRES 4 B 294 LEU VAL LEU HIS TYR GLN PRO ILE VAL GLU LEU ALA SER SEQRES 5 B 294 GLY ARG ILE VAL GLY GLY GLU ALA LEU VAL ARG TRP GLU SEQRES 6 B 294 ASP PRO GLU ARG GLY LEU VAL MSE PRO SER ALA PHE ILE SEQRES 7 B 294 PRO ALA ALA GLU ASP THR GLY LEU ILE VAL ALA LEU SER SEQRES 8 B 294 ASP TRP VAL LEU GLU ALA CYS CYS THR GLN LEU ARG ALA SEQRES 9 B 294 TRP GLN GLN GLN GLY ARG ALA ALA ASP ASP LEU THR LEU SEQRES 10 B 294 SER VAL ASN ILE SER THR ARG GLN PHE GLU GLY GLU HIS SEQRES 11 B 294 LEU THR ARG ALA VAL ASP ARG ALA LEU ALA ARG SER GLY SEQRES 12 B 294 LEU ARG PRO ASP CYS LEU GLU LEU GLU ILE THR GLU ASN SEQRES 13 B 294 VAL MSE LEU VAL MSE THR ASP GLU VAL ARG THR CYS LEU SEQRES 14 B 294 ASP ALA LEU ARG ALA ARG GLY VAL ARG LEU ALA LEU ASP SEQRES 15 B 294 ASP PHE GLY THR GLY TYR SER SER LEU SER TYR LEU SER SEQRES 16 B 294 GLN LEU PRO PHE HIS GLY LEU LYS ILE ASP GLN SER PHE SEQRES 17 B 294 VAL ARG LYS ILE PRO ALA HIS PRO SER GLU THR GLN ILE SEQRES 18 B 294 VAL THR THR ILE LEU ALA LEU ALA ARG GLY LEU GLY MSE SEQRES 19 B 294 GLU VAL VAL ALA GLU GLY ILE GLU THR ALA GLN GLN TYR SEQRES 20 B 294 ALA PHE LEU ARG ASP ARG GLY CYS GLU PHE GLY GLN GLY SEQRES 21 B 294 ASN LEU MSE SER THR PRO GLN ALA ALA ASP ALA PHE ALA SEQRES 22 B 294 SER LEU LEU ASP ARG GLN LYS ALA SER GLY GLN ARG PRO SEQRES 23 B 294 VAL HIS GLY HIS GLU THR ALA PRO MODRES 3N3T MSE A 537 MET SELENOMETHIONINE MODRES 3N3T MSE A 622 MET SELENOMETHIONINE MODRES 3N3T MSE A 625 MET SELENOMETHIONINE MODRES 3N3T MSE A 698 MET SELENOMETHIONINE MODRES 3N3T MSE A 727 MET SELENOMETHIONINE MODRES 3N3T MSE B 537 MET SELENOMETHIONINE MODRES 3N3T MSE B 622 MET SELENOMETHIONINE MODRES 3N3T MSE B 625 MET SELENOMETHIONINE MODRES 3N3T MSE B 698 MET SELENOMETHIONINE MODRES 3N3T MSE B 727 MET SELENOMETHIONINE HET MSE A 537 8 HET MSE A 622 8 HET MSE A 625 8 HET MSE A 698 8 HET MSE A 727 8 HET MSE B 537 8 HET MSE B 622 8 HET MSE B 625 8 HET MSE B 698 8 HET MSE B 727 8 HET C2E A 801 46 HET MG A 802 1 HET MG A 803 1 HET CL A 804 1 HET C2E B 801 46 HET MG B 802 1 HET MG B 803 1 HETNAM MSE SELENOMETHIONINE HETNAM C2E 9,9'-[(2R,3R,3AS,5S,7AR,9R,10R,10AS,12S,14AR)-3,5,10, HETNAM 2 C2E 12-TETRAHYDROXY-5,12-DIOXIDOOCTAHYDRO-2H,7H-DIFURO[3, HETNAM 3 C2E 2-D:3',2'-J][1,3,7,9,2, HETNAM 4 C2E 8]TETRAOXADIPHOSPHACYCLODODECINE-2,9-DIYL]BIS(2-AMINO- HETNAM 5 C2E 1,9-DIHYDRO-6H-PURIN-6-ONE) HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION HETSYN C2E C-DI-GMP; CYCLIC DIGUANOSINE MONOPHOSPHATE FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 3 C2E 2(C20 H24 N10 O14 P2) FORMUL 4 MG 4(MG 2+) FORMUL 6 CL CL 1- FORMUL 10 HOH *225(H2 O) HELIX 1 1 THR A 490 ARG A 501 1 12 HELIX 2 2 MSE A 537 ALA A 540 5 4 HELIX 3 3 PHE A 541 GLY A 549 1 9 HELIX 4 4 GLY A 549 GLN A 572 1 24 HELIX 5 5 SER A 586 GLY A 592 5 7 HELIX 6 6 GLU A 593 GLY A 607 1 15 HELIX 7 7 ARG A 609 ASP A 611 5 3 HELIX 8 8 ASN A 620 MSE A 625 5 6 HELIX 9 9 THR A 626 GLY A 640 1 15 HELIX 10 10 SER A 654 LEU A 661 1 8 HELIX 11 11 ASP A 669 ARG A 674 1 6 HELIX 12 12 HIS A 679 GLY A 697 1 19 HELIX 13 13 THR A 707 ARG A 717 1 11 HELIX 14 14 ALA A 733 ALA A 745 1 13 HELIX 15 15 HIS B 486 ARG B 501 1 16 HELIX 16 16 MSE B 537 ALA B 540 5 4 HELIX 17 17 PHE B 541 GLY B 549 1 9 HELIX 18 18 LEU B 550 GLN B 572 1 23 HELIX 19 19 SER B 586 GLY B 592 5 7 HELIX 20 20 GLU B 593 GLY B 607 1 15 HELIX 21 21 ARG B 609 ASP B 611 5 3 HELIX 22 22 ASN B 620 MSE B 625 5 6 HELIX 23 23 THR B 626 GLY B 640 1 15 HELIX 24 24 SER B 654 LEU B 661 1 8 HELIX 25 25 ASP B 669 ARG B 674 1 6 HELIX 26 26 HIS B 679 GLY B 697 1 19 HELIX 27 27 THR B 707 ARG B 717 1 11 HELIX 28 28 ALA B 733 SER B 746 1 14 SHEET 1 A 4 GLY A 534 VAL A 536 0 SHEET 2 A 4 ILE A 519 ASP A 530 -1 N ASP A 530 O GLY A 534 SHEET 3 A 4 LEU A 504 GLU A 513 -1 N HIS A 507 O LEU A 525 SHEET 4 A 4 GLN A 731 ALA A 732 -1 O GLN A 731 N TYR A 508 SHEET 1 B10 GLY A 534 VAL A 536 0 SHEET 2 B10 ILE A 519 ASP A 530 -1 N ASP A 530 O GLY A 534 SHEET 3 B10 LEU A 581 ILE A 585 1 O SER A 582 N ALA A 524 SHEET 4 B10 LEU A 613 THR A 618 1 O GLU A 616 N ILE A 585 SHEET 5 B10 ARG A 642 PHE A 648 1 O ASP A 646 N ILE A 617 SHEET 6 B10 GLY A 665 ILE A 668 1 O LYS A 667 N LEU A 645 SHEET 7 B10 GLU A 699 GLU A 703 1 O VAL A 701 N LEU A 666 SHEET 8 B10 PHE A 721 GLN A 723 1 O PHE A 721 N ALA A 702 SHEET 9 B10 LEU A 504 GLU A 513 -1 N VAL A 512 O GLY A 722 SHEET 10 B10 GLN A 731 ALA A 732 -1 O GLN A 731 N TYR A 508 SHEET 1 C 4 GLY B 534 VAL B 536 0 SHEET 2 C 4 ILE B 519 ASP B 530 -1 N TRP B 528 O VAL B 536 SHEET 3 C 4 LEU B 504 GLU B 513 -1 N HIS B 507 O LEU B 525 SHEET 4 C 4 GLN B 731 ALA B 732 -1 O GLN B 731 N TYR B 508 SHEET 1 D10 GLY B 534 VAL B 536 0 SHEET 2 D10 ILE B 519 ASP B 530 -1 N TRP B 528 O VAL B 536 SHEET 3 D10 THR B 580 ASN B 584 1 O SER B 582 N ALA B 524 SHEET 4 D10 LEU B 613 THR B 618 1 O GLU B 616 N VAL B 583 SHEET 5 D10 ARG B 642 PHE B 648 1 O ALA B 644 N LEU B 615 SHEET 6 D10 GLY B 665 ILE B 668 1 O LYS B 667 N LEU B 645 SHEET 7 D10 GLU B 699 GLU B 703 1 O GLU B 699 N LEU B 666 SHEET 8 D10 PHE B 721 GLN B 723 1 O PHE B 721 N ALA B 702 SHEET 9 D10 LEU B 504 GLU B 513 -1 N VAL B 512 O GLY B 722 SHEET 10 D10 GLN B 731 ALA B 732 -1 O GLN B 731 N TYR B 508 LINK C VAL A 536 N MSE A 537 1555 1555 1.34 LINK C MSE A 537 N PRO A 538 1555 1555 1.33 LINK C VAL A 621 N MSE A 622 1555 1555 1.34 LINK C MSE A 622 N LEU A 623 1555 1555 1.33 LINK C VAL A 624 N MSE A 625 1555 1555 1.33 LINK C MSE A 625 N THR A 626 1555 1555 1.34 LINK C GLY A 697 N MSE A 698 1555 1555 1.34 LINK C MSE A 698 N GLU A 699 1555 1555 1.33 LINK C LEU A 726 N MSE A 727 1555 1555 1.33 LINK C MSE A 727 N SER A 728 1555 1555 1.33 LINK C VAL B 536 N MSE B 537 1555 1555 1.33 LINK C MSE B 537 N PRO B 538 1555 1555 1.34 LINK C VAL B 621 N MSE B 622 1555 1555 1.33 LINK C MSE B 622 N LEU B 623 1555 1555 1.33 LINK C VAL B 624 N MSE B 625 1555 1555 1.32 LINK C MSE B 625 N THR B 626 1555 1555 1.33 LINK C GLY B 697 N MSE B 698 1555 1555 1.34 LINK C MSE B 698 N GLU B 699 1555 1555 1.33 LINK C LEU B 726 N MSE B 727 1555 1555 1.33 LINK C MSE B 727 N SER B 728 1555 1555 1.33 LINK O HOH A 1 MG MG A 802 1555 1555 2.26 LINK O HOH A 24 MG MG A 803 1555 1555 2.47 LINK OE2 GLU A 523 MG MG A 802 1555 1555 2.02 LINK OD1 ASN A 584 MG MG A 802 1555 1555 1.95 LINK OE1 GLU A 616 MG MG A 802 1555 1555 2.22 LINK OD2 ASP A 646 MG MG A 802 1555 1555 2.15 LINK OD1 ASP A 646 MG MG A 803 1555 1555 2.59 LINK OD1 ASP A 647 MG MG A 803 1555 1555 2.48 LINK OE1 GLU A 703 MG MG A 803 1555 1555 2.10 LINK O11 C2E A 801 MG MG A 802 1555 1555 1.78 LINK O21 C2E A 801 MG MG A 803 1555 1555 2.16 LINK O HOH B 206 MG MG B 803 1555 1555 2.73 LINK O HOH B 209 MG MG B 802 1555 1555 2.09 LINK OE2 GLU B 523 MG MG B 802 1555 1555 2.18 LINK OD1 ASN B 584 MG MG B 802 1555 1555 2.18 LINK OE1 GLU B 616 MG MG B 802 1555 1555 2.16 LINK OD2 ASP B 646 MG MG B 802 1555 1555 2.16 LINK OD1 ASP B 646 MG MG B 803 1555 1555 2.24 LINK OD1 ASP B 647 MG MG B 803 1555 1555 2.34 LINK OE2 GLU B 703 MG MG B 803 1555 1555 2.08 LINK OE1 GLU B 703 MG MG B 803 1555 1555 2.26 LINK O11 C2E B 801 MG MG B 802 1555 1555 1.98 LINK O21 C2E B 801 MG MG B 803 1555 1555 1.83 CISPEP 1 ILE A 676 PRO A 677 0 -18.02 CISPEP 2 ILE B 676 PRO B 677 0 -7.59 SITE 1 AC1 27 HOH A 1 HOH A 4 HOH A 53 HOH A 84 SITE 2 AC1 27 HOH A 111 HOH A 219 GLN A 509 GLU A 523 SITE 3 AC1 27 LEU A 525 VAL A 526 ARG A 527 MSE A 537 SITE 4 AC1 27 PRO A 538 VAL A 558 ARG A 567 ASN A 584 SITE 5 AC1 27 ASP A 646 ASP A 647 GLN A 670 GLU A 703 SITE 6 AC1 27 GLY A 704 GLU A 706 GLY A 724 ASN A 725 SITE 7 AC1 27 PRO A 730 MG A 802 MG A 803 SITE 1 AC2 6 HOH A 1 GLU A 523 ASN A 584 GLU A 616 SITE 2 AC2 6 ASP A 646 C2E A 801 SITE 1 AC3 5 HOH A 24 ASP A 646 ASP A 647 GLU A 703 SITE 2 AC3 5 C2E A 801 SITE 1 AC4 2 MSE A 537 ARG A 609 SITE 1 AC5 25 HOH B 115 HOH B 152 HOH B 157 HOH B 172 SITE 2 AC5 25 HOH B 209 GLN B 509 GLU B 523 VAL B 526 SITE 3 AC5 25 ARG B 527 PRO B 538 ILE B 551 VAL B 558 SITE 4 AC5 25 ASN B 584 ASP B 646 ASP B 647 GLN B 670 SITE 5 AC5 25 GLU B 703 GLY B 704 ILE B 705 GLU B 706 SITE 6 AC5 25 GLY B 724 ASN B 725 PRO B 730 MG B 802 SITE 7 AC5 25 MG B 803 SITE 1 AC6 6 HOH B 209 GLU B 523 ASN B 584 GLU B 616 SITE 2 AC6 6 ASP B 646 C2E B 801 SITE 1 AC7 6 HOH B 206 HOH B 209 ASP B 646 ASP B 647 SITE 2 AC7 6 GLU B 703 C2E B 801 CRYST1 51.560 63.201 173.987 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019395 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015823 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005748 0.00000