HEADER HYDROLASE 26-MAY-10 3N77 TITLE CRYSTAL STRUCTURE OF IDP01880, PUTATIVE NTP PYROPHOSPHOHYDROLASE OF TITLE 2 SALMONELLA TYPHIMURIUM LT2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOSIDE TRIPHOSPHATASE NUDI; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.6.1.-; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR SOURCE 3 TYPHIMURIUM; SOURCE 4 ORGANISM_TAXID: 90371; SOURCE 5 STRAIN: LT2; SOURCE 6 GENE: NUDI, STM2295, YFAO; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMICS, ISFI, SURFACE ENTROPY REDUCTION, PSI-2, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, INTEGRATED CENTER FOR STRUCTURE AND FUNCTION KEYWDS 3 INNOVATION, HYDROLASE, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 4 DISEASES (CSGID) EXPDTA X-RAY DIFFRACTION AUTHOR J.FRYDRYSIAK,D.R.COOPER,U.DEREWENDA,W.F.ANDERSON,Z.S.DEREWENDA, AUTHOR 2 INTEGRATED CENTER FOR STRUCTURE AND FUNCTION INNOVATION (ISFI), AUTHOR 3 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 3 06-SEP-23 3N77 1 SEQADV REVDAT 2 08-NOV-17 3N77 1 REMARK REVDAT 1 18-AUG-10 3N77 0 JRNL AUTH J.FRYDRYSIAK,D.R.COOPER,U.DEREWENDA,Z.S.DEREWENDA JRNL TITL CRYSTAL STRUCTURE OF IDP01880, PUTATIVE NTP JRNL TITL 2 PYROPHOSPHOHYDROLASE OF SALMONELLA TYPHIMURIUM LT2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.86 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.86 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.06 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 20995 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 1041 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.86 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.91 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1144 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 73.15 REMARK 3 BIN R VALUE (WORKING SET) : 0.2040 REMARK 3 BIN FREE R VALUE SET COUNT : 41 REMARK 3 BIN FREE R VALUE : 0.2930 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2262 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 204 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.18000 REMARK 3 B22 (A**2) : 0.18000 REMARK 3 B33 (A**2) : 0.54000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.11000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.151 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.154 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.100 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.791 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2334 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1605 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3171 ; 1.552 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3887 ; 1.196 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 292 ; 6.782 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 118 ;35.907 ;23.559 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 409 ;14.475 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;18.247 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 351 ; 0.107 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2620 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 494 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : NULL REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 0 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -10 A 9999 REMARK 3 ORIGIN FOR THE GROUP (A): -10.3441 14.0576 36.4897 REMARK 3 T TENSOR REMARK 3 T11: 0.0300 T22: 0.0278 REMARK 3 T33: 0.0124 T12: 0.0040 REMARK 3 T13: 0.0141 T23: 0.0075 REMARK 3 L TENSOR REMARK 3 L11: 0.8019 L22: 1.3597 REMARK 3 L33: 0.0984 L12: -0.0207 REMARK 3 L13: -0.1329 L23: 0.2751 REMARK 3 S TENSOR REMARK 3 S11: -0.0635 S12: -0.0453 S13: -0.0454 REMARK 3 S21: 0.1335 S22: 0.0328 S23: 0.1155 REMARK 3 S31: 0.0448 S32: 0.0143 S33: 0.0307 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -10 B 9999 REMARK 3 ORIGIN FOR THE GROUP (A): -8.6596 -1.4560 56.7996 REMARK 3 T TENSOR REMARK 3 T11: 0.0556 T22: 0.0249 REMARK 3 T33: 0.0126 T12: -0.0097 REMARK 3 T13: -0.0243 T23: 0.0001 REMARK 3 L TENSOR REMARK 3 L11: 1.7900 L22: 1.7062 REMARK 3 L33: 0.4223 L12: -0.2267 REMARK 3 L13: -0.2736 L23: -0.1446 REMARK 3 S TENSOR REMARK 3 S11: -0.0323 S12: 0.1329 S13: -0.0316 REMARK 3 S21: -0.2383 S22: 0.0222 S23: 0.1165 REMARK 3 S31: 0.0235 S32: 0.0013 S33: 0.0100 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 3N77 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-MAY-10. REMARK 100 THE DEPOSITION ID IS D_1000059466. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-OCT-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22053 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.860 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.86 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.21100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: 3GRN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200NL OF PROTEIN AT 20MG/ML WAS MIXED REMARK 280 WITH 200NL OF 0.1M AMMONIUM ACETATE, 0.1M BIS-TRIS PH5.5, 17%W/V REMARK 280 PEG10000 SUSPENDED OVER RESERVOIR OF 60 UL OF 1.5M NACL, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 33.13400 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 3.35512 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 33.13400 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 92.97558 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 196 O HOH A 240 1.96 REMARK 500 O HOH A 146 O HOH A 224 2.12 REMARK 500 O HOH A 203 O HOH A 216 2.12 REMARK 500 NE2 GLN A 61 O HOH A 180 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 155 O HOH B 214 2657 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 70 -80.16 -107.69 REMARK 500 TRP B 70 -75.66 -108.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: IDP01880 RELATED DB: TARGETDB DBREF 3N77 A 1 141 UNP Q8ZNF5 NUDI_SALTY 1 141 DBREF 3N77 B 1 141 UNP Q8ZNF5 NUDI_SALTY 1 141 SEQADV 3N77 SER A -2 UNP Q8ZNF5 EXPRESSION TAG SEQADV 3N77 ASN A -1 UNP Q8ZNF5 EXPRESSION TAG SEQADV 3N77 ALA A 0 UNP Q8ZNF5 EXPRESSION TAG SEQADV 3N77 ALA A 118 UNP Q8ZNF5 LYS 118 ENGINEERED MUTATION SEQADV 3N77 ALA A 120 UNP Q8ZNF5 GLU 120 ENGINEERED MUTATION SEQADV 3N77 ALA A 121 UNP Q8ZNF5 GLU 121 ENGINEERED MUTATION SEQADV 3N77 SER B -2 UNP Q8ZNF5 ENGINEERED MUTATION SEQADV 3N77 ASN B -1 UNP Q8ZNF5 EXPRESSION TAG SEQADV 3N77 ALA B 0 UNP Q8ZNF5 EXPRESSION TAG SEQADV 3N77 ALA B 118 UNP Q8ZNF5 LYS 118 ENGINEERED MUTATION SEQADV 3N77 ALA B 120 UNP Q8ZNF5 GLU 120 ENGINEERED MUTATION SEQADV 3N77 ALA B 121 UNP Q8ZNF5 GLU 121 ENGINEERED MUTATION SEQRES 1 A 144 SER ASN ALA MET ARG GLN ARG THR ILE VAL CYS PRO LEU SEQRES 2 A 144 ILE GLN ASN ASP GLY CYS TYR LEU LEU CYS LYS MET ALA SEQRES 3 A 144 ASP ASN ARG GLY VAL PHE PRO GLY GLN TRP ALA LEU SER SEQRES 4 A 144 GLY GLY GLY VAL GLU PRO GLY GLU ARG ILE GLU GLU ALA SEQRES 5 A 144 LEU ARG ARG GLU ILE ARG GLU GLU LEU GLY GLU GLN LEU SEQRES 6 A 144 ILE LEU SER ASP ILE THR PRO TRP THR PHE ARG ASP ASP SEQRES 7 A 144 ILE ARG ILE LYS THR TYR ALA ASP GLY ARG GLN GLU GLU SEQRES 8 A 144 ILE TYR MET ILE TYR LEU ILE PHE ASP CYS VAL SER ALA SEQRES 9 A 144 ASN ARG ASP ILE CYS ILE ASN ASP GLU PHE GLN ASP TYR SEQRES 10 A 144 ALA TRP VAL ALA PRO ALA ALA LEU ALA LEU TYR ASP LEU SEQRES 11 A 144 ASN VAL ALA THR ARG HIS THR LEU ALA LEU LYS GLY LEU SEQRES 12 A 144 LEU SEQRES 1 B 144 SER ASN ALA MET ARG GLN ARG THR ILE VAL CYS PRO LEU SEQRES 2 B 144 ILE GLN ASN ASP GLY CYS TYR LEU LEU CYS LYS MET ALA SEQRES 3 B 144 ASP ASN ARG GLY VAL PHE PRO GLY GLN TRP ALA LEU SER SEQRES 4 B 144 GLY GLY GLY VAL GLU PRO GLY GLU ARG ILE GLU GLU ALA SEQRES 5 B 144 LEU ARG ARG GLU ILE ARG GLU GLU LEU GLY GLU GLN LEU SEQRES 6 B 144 ILE LEU SER ASP ILE THR PRO TRP THR PHE ARG ASP ASP SEQRES 7 B 144 ILE ARG ILE LYS THR TYR ALA ASP GLY ARG GLN GLU GLU SEQRES 8 B 144 ILE TYR MET ILE TYR LEU ILE PHE ASP CYS VAL SER ALA SEQRES 9 B 144 ASN ARG ASP ILE CYS ILE ASN ASP GLU PHE GLN ASP TYR SEQRES 10 B 144 ALA TRP VAL ALA PRO ALA ALA LEU ALA LEU TYR ASP LEU SEQRES 11 B 144 ASN VAL ALA THR ARG HIS THR LEU ALA LEU LYS GLY LEU SEQRES 12 B 144 LEU FORMUL 3 HOH *204(H2 O) HELIX 1 1 ARG A 45 GLY A 59 1 15 HELIX 2 2 ALA A 118 TYR A 125 5 8 HELIX 3 3 ASN A 128 GLY A 139 1 12 HELIX 4 4 ARG B 45 GLY B 59 1 15 HELIX 5 5 ALA B 118 TYR B 125 5 8 HELIX 6 6 ASN B 128 GLY B 139 1 12 SHEET 1 A 5 TRP A 33 ALA A 34 0 SHEET 2 A 5 CYS A 16 MET A 22 -1 N CYS A 20 O ALA A 34 SHEET 3 A 5 ARG A 2 ASN A 13 -1 N ILE A 11 O LEU A 18 SHEET 4 A 5 GLN A 86 SER A 100 1 O ILE A 92 N ILE A 6 SHEET 5 A 5 LEU A 64 THR A 80 -1 N ARG A 77 O ILE A 89 SHEET 1 B 4 GLY A 38 GLY A 39 0 SHEET 2 B 4 ARG A 2 ASN A 13 -1 N VAL A 7 O GLY A 38 SHEET 3 B 4 CYS A 16 MET A 22 -1 O LEU A 18 N ILE A 11 SHEET 4 B 4 PHE A 111 VAL A 117 -1 O GLN A 112 N LYS A 21 SHEET 1 C 5 TRP B 33 ALA B 34 0 SHEET 2 C 5 CYS B 16 MET B 22 -1 N CYS B 20 O ALA B 34 SHEET 3 C 5 ARG B 2 ASN B 13 -1 N ILE B 11 O LEU B 18 SHEET 4 C 5 GLN B 86 SER B 100 1 O ILE B 92 N ILE B 6 SHEET 5 C 5 LEU B 64 THR B 80 -1 N LYS B 79 O GLU B 87 SHEET 1 D 4 GLY B 38 GLY B 39 0 SHEET 2 D 4 ARG B 2 ASN B 13 -1 N VAL B 7 O GLY B 38 SHEET 3 D 4 CYS B 16 MET B 22 -1 O LEU B 18 N ILE B 11 SHEET 4 D 4 PHE B 111 VAL B 117 -1 O VAL B 117 N TYR B 17 CRYST1 44.498 66.268 50.836 90.00 113.87 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022473 0.000000 0.009945 0.00000 SCALE2 0.000000 0.015090 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021511 0.00000