HEADER HYDROLASE 28-MAY-10 3N8U TITLE CRYSTAL STRUCTURE OF AN IMELYSIN PEPTIDASE (BACOVA_03801) FROM TITLE 2 BACTEROIDES OVATUS AT 1.44 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: IMELYSIN PEPTIDASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES OVATUS; SOURCE 3 ORGANISM_TAXID: 411476; SOURCE 4 STRAIN: ATCC 8483; SOURCE 5 GENE: BACOVA_03801; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, PSI-2, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 4 01-FEB-23 3N8U 1 REMARK SEQADV LINK REVDAT 3 08-NOV-17 3N8U 1 REMARK REVDAT 2 10-AUG-11 3N8U 1 JRNL VERSN REVDAT 1 28-JUL-10 3N8U 0 JRNL AUTH Q.XU,N.D.RAWLINGS,C.L.FARR,H.J.CHIU,J.C.GRANT,L.JAROSZEWSKI, JRNL AUTH 2 H.E.KLOCK,M.W.KNUTH,M.D.MILLER,D.WEEKES,M.A.ELSLIGER, JRNL AUTH 3 A.M.DEACON,A.GODZIK,S.A.LESLEY,I.A.WILSON JRNL TITL STRUCTURAL AND SEQUENCE ANALYSIS OF IMELYSIN-LIKE PROTEINS JRNL TITL 2 IMPLICATED IN BACTERIAL IRON UPTAKE. JRNL REF PLOS ONE V. 6 21875 2011 JRNL REFN ESSN 1932-6203 JRNL PMID 21799754 JRNL DOI 10.1371/JOURNAL.PONE.0021875 REMARK 2 REMARK 2 RESOLUTION. 1.44 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.44 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.74 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 132168 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.190 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 6661 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 1.4800 - 1.4400 0.00 8915 460 0.2430 0.2700 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.26 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.56 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.18500 REMARK 3 B22 (A**2) : -2.31700 REMARK 3 B33 (A**2) : -1.86800 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -4.20600 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 5921 REMARK 3 ANGLE : 0.740 8132 REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL 891 REMARK 3 DIHEDRAL : NULL 2067 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -4.2030 6.9220 101.8008 REMARK 3 T TENSOR REMARK 3 T11: -0.0576 T22: -0.0686 REMARK 3 T33: 0.0161 T12: 0.0000 REMARK 3 T13: 0.0213 T23: 0.0013 REMARK 3 L TENSOR REMARK 3 L11: 1.2239 L22: 0.5631 REMARK 3 L33: 0.3895 L12: -0.5049 REMARK 3 L13: -0.0659 L23: 0.1948 REMARK 3 S TENSOR REMARK 3 S11: 0.0615 S12: 0.0117 S13: 0.2631 REMARK 3 S21: -0.0427 S22: -0.0029 S23: -0.1316 REMARK 3 S31: -0.0528 S32: 0.0305 S33: -0.0586 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): -17.9581 3.0935 70.3671 REMARK 3 T TENSOR REMARK 3 T11: -0.1730 T22: -0.0635 REMARK 3 T33: -0.1299 T12: 0.0750 REMARK 3 T13: 0.0835 T23: 0.0213 REMARK 3 L TENSOR REMARK 3 L11: 3.7366 L22: 1.3319 REMARK 3 L33: 1.9985 L12: -1.4581 REMARK 3 L13: -2.2654 L23: 0.6920 REMARK 3 S TENSOR REMARK 3 S11: 0.1974 S12: 0.5194 S13: -0.1841 REMARK 3 S21: -0.2853 S22: -0.4056 S23: -0.1290 REMARK 3 S31: -0.0498 S32: -0.1605 S33: 0.2081 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. A MET-INHIBITION PROTOCOL WAS USED REMARK 3 FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. REMARK 3 THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 2. MAGNESIUM (MG), CHLORIDE (CL), ETHYLENE GLYCOL REMARK 3 (EDO) MODELED ARE PRESENT CRYSTALLIZATION/PURIFICATION/CRYO REMARK 3 BUFFERS. 3. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. 4. WATERS WERE EXCLUDED FROM AUTOMATIC TLS ASSIGNMENT. REMARK 3 5. RAMACHANDRAN OUTLIER IS LOCATION IN A REGION WITH POOR REMARK 3 DENSITY. REMARK 4 REMARK 4 3N8U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-JUN-10. REMARK 100 THE DEPOSITION ID IS D_1000059525. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-APR-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837,0.97947,0.97901 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING) REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 132203 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.440 REMARK 200 RESOLUTION RANGE LOW (A) : 29.738 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.04600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.44 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.92000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHELXD, AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: DATA WERE SCALED USING XSCALE WITH FRIEDEL PAIRS KEPT AS REMARK 200 SEPARATE WHEN COMPUTING R-SYM, COMPLETENESS AND REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.20M MGACETATE, 20.00% PEG-3350, NO REMARK 280 BUFFER PH 7.7, NANODROP, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 65.73500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.96500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 65.73500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 24.96500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CRYSTAL PACKING SUGGESTS THE ASSIGNMENT OF A MONOMER AS THE REMARK 300 SIGNIFICANT OLIGOMERIZATION STATE IN SOLUTION. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 SER A 25 REMARK 465 ASP A 26 REMARK 465 ASP A 27 REMARK 465 ASP A 28 REMARK 465 ASN A 29 REMARK 465 PRO A 30 REMARK 465 THR A 31 REMARK 465 VAL A 32 REMARK 465 GLY B 0 REMARK 465 SER B 25 REMARK 465 ASP B 26 REMARK 465 ASP B 27 REMARK 465 ASP B 28 REMARK 465 ASN B 29 REMARK 465 PRO B 30 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 33 CG OD1 OD2 REMARK 470 SER A 89 OG REMARK 470 GLU A 351 CD OE1 OE2 REMARK 470 SER B 289 OG REMARK 470 GLU B 351 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 71 -56.47 -122.98 REMARK 500 HIS A 86 62.46 36.46 REMARK 500 ASN A 170 52.13 -106.77 REMARK 500 ASN A 180 85.03 -159.76 REMARK 500 ASN A 230 -73.92 -97.54 REMARK 500 VAL A 260 -67.03 -106.60 REMARK 500 ASP A 326 35.09 -142.09 REMARK 500 HIS B 86 55.72 36.28 REMARK 500 HIS B 86 62.15 36.28 REMARK 500 ASN B 170 66.23 -109.48 REMARK 500 ASN B 180 84.52 -150.93 REMARK 500 ASN B 230 -75.66 -98.65 REMARK 500 VAL B 260 -66.42 -106.31 REMARK 500 ASP B 326 35.21 -141.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 1 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 527 O REMARK 620 2 HOH A 543 O 90.9 REMARK 620 3 HOH A 572 O 87.4 90.9 REMARK 620 4 HOH A 578 O 91.3 177.7 89.8 REMARK 620 5 HOH A 620 O 89.9 87.5 176.8 91.9 REMARK 620 6 HOH A 662 O 178.4 89.4 94.2 88.3 88.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 2 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 570 O REMARK 620 2 HOH A 876 O 86.6 REMARK 620 3 HOH A1179 O 76.2 93.7 REMARK 620 4 HOH B 416 O 176.9 96.4 103.1 REMARK 620 5 HOH B 526 O 102.3 83.5 176.9 78.6 REMARK 620 6 HOH B 536 O 92.4 165.5 100.1 84.7 82.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 3 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 426 O REMARK 620 2 HOH B 466 O 88.4 REMARK 620 3 HOH B 483 O 91.4 91.6 REMARK 620 4 HOH B 495 O 178.4 90.1 89.3 REMARK 620 5 HOH B 516 O 90.1 175.8 92.4 91.3 REMARK 620 6 HOH B 556 O 92.4 85.8 175.4 86.9 90.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 7 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 12 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 8 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 9 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 10 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 11 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 416712 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT (RESIDUES 25-384) WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 3N8U A 25 384 UNP A7M120 A7M120_BACOV 25 384 DBREF 3N8U B 25 384 UNP A7M120 A7M120_BACOV 25 384 SEQADV 3N8U GLY A 0 UNP A7M120 EXPRESSION TAG SEQADV 3N8U GLY B 0 UNP A7M120 EXPRESSION TAG SEQRES 1 A 361 GLY SER ASP ASP ASP ASN PRO THR VAL ASP PRO ALA ASN SEQRES 2 A 361 ILE ASP TYR THR PRO GLU ASN ALA SER SER TRP HIS ASN SEQRES 3 A 361 TYR MSE ARG ASN VAL ALA ALA LEU LEU LYS THR ASP ALA SEQRES 4 A 361 THR ASN LEU TYR ASN ALA TRP ASN SER SER TYR LYS GLY SEQRES 5 A 361 GLY GLU SER TYR ALA SER LEU PHE LYS ALA HIS SER GLY SEQRES 6 A 361 SER PRO TYR ALA SER ALA LEU SER CYS VAL GLU GLU ILE SEQRES 7 A 361 VAL ASP LYS CYS ALA GLU ILE ALA ASN GLU VAL GLY THR SEQRES 8 A 361 ALA LYS ILE GLY ASP PRO TYR ASN LEU TYR LYS ALA GLY SEQRES 9 A 361 ASN THR GLU GLU ALA LEU TYR ALA VAL GLU SER TRP TYR SEQRES 10 A 361 SER TRP HIS SER ARG ASP ASP TYR THR ASN ASN ILE TYR SEQRES 11 A 361 SER ILE ARG ASN ALA TYR TYR GLY SER LEU ASP GLY ASN SEQRES 12 A 361 ILE ASN ALA ASN SER LEU SER THR VAL ILE ALA GLY ALA SEQRES 13 A 361 ASN SER SER LEU ASP THR LYS ILE LYS ASN ALA ILE GLN SEQRES 14 A 361 LYS ALA ALA LYS ALA ILE GLN ASP ILE PRO GLN PRO PHE SEQRES 15 A 361 ARG ASN HIS ILE PRO SER ASN GLU THR VAL ALA ALA MSE SEQRES 16 A 361 ASP ALA CYS ALA GLU LEU GLU SER ILE LEU LYS ASN ASP SEQRES 17 A 361 LEU LYS SER TYR ILE ALA ASN ASN SER ASN ASN ILE ASN SEQRES 18 A 361 THR ASP ALA VAL LEU ASN PRO VAL VAL THR GLN TYR VAL SEQRES 19 A 361 ASP ALA VAL VAL VAL PRO THR TYR LYS SER LEU LYS GLU SEQRES 20 A 361 LYS ASN ASP ALA LEU TYR ASN ALA VAL ILE VAL LEU ALA SEQRES 21 A 361 ASP ASN PRO SER ASN SER ALA PHE GLU THR ALA CYS ASP SEQRES 22 A 361 ALA TRP ILE THR ALA ARG GLU PRO TRP GLU LYS SER GLU SEQRES 23 A 361 ALA PHE LEU PHE GLY PRO VAL ASP GLU MSE GLY LEU ASP SEQRES 24 A 361 PRO ASN MSE ASP SER TRP PRO LEU ASP GLN ASN ALA ILE SEQRES 25 A 361 VAL GLN ILE LEU ASN SER GLN SER TRP SER ASP LEU GLU SEQRES 26 A 361 TRP SER GLU GLY ASP ASP GLU ALA ALA VAL GLU SER ALA SEQRES 27 A 361 GLN ASN VAL ARG GLY PHE HIS THR LEU GLU PHE LEU LEU SEQRES 28 A 361 TYR LYS ASN GLY GLU PRO ARG LYS VAL GLN SEQRES 1 B 361 GLY SER ASP ASP ASP ASN PRO THR VAL ASP PRO ALA ASN SEQRES 2 B 361 ILE ASP TYR THR PRO GLU ASN ALA SER SER TRP HIS ASN SEQRES 3 B 361 TYR MSE ARG ASN VAL ALA ALA LEU LEU LYS THR ASP ALA SEQRES 4 B 361 THR ASN LEU TYR ASN ALA TRP ASN SER SER TYR LYS GLY SEQRES 5 B 361 GLY GLU SER TYR ALA SER LEU PHE LYS ALA HIS SER GLY SEQRES 6 B 361 SER PRO TYR ALA SER ALA LEU SER CYS VAL GLU GLU ILE SEQRES 7 B 361 VAL ASP LYS CYS ALA GLU ILE ALA ASN GLU VAL GLY THR SEQRES 8 B 361 ALA LYS ILE GLY ASP PRO TYR ASN LEU TYR LYS ALA GLY SEQRES 9 B 361 ASN THR GLU GLU ALA LEU TYR ALA VAL GLU SER TRP TYR SEQRES 10 B 361 SER TRP HIS SER ARG ASP ASP TYR THR ASN ASN ILE TYR SEQRES 11 B 361 SER ILE ARG ASN ALA TYR TYR GLY SER LEU ASP GLY ASN SEQRES 12 B 361 ILE ASN ALA ASN SER LEU SER THR VAL ILE ALA GLY ALA SEQRES 13 B 361 ASN SER SER LEU ASP THR LYS ILE LYS ASN ALA ILE GLN SEQRES 14 B 361 LYS ALA ALA LYS ALA ILE GLN ASP ILE PRO GLN PRO PHE SEQRES 15 B 361 ARG ASN HIS ILE PRO SER ASN GLU THR VAL ALA ALA MSE SEQRES 16 B 361 ASP ALA CYS ALA GLU LEU GLU SER ILE LEU LYS ASN ASP SEQRES 17 B 361 LEU LYS SER TYR ILE ALA ASN ASN SER ASN ASN ILE ASN SEQRES 18 B 361 THR ASP ALA VAL LEU ASN PRO VAL VAL THR GLN TYR VAL SEQRES 19 B 361 ASP ALA VAL VAL VAL PRO THR TYR LYS SER LEU LYS GLU SEQRES 20 B 361 LYS ASN ASP ALA LEU TYR ASN ALA VAL ILE VAL LEU ALA SEQRES 21 B 361 ASP ASN PRO SER ASN SER ALA PHE GLU THR ALA CYS ASP SEQRES 22 B 361 ALA TRP ILE THR ALA ARG GLU PRO TRP GLU LYS SER GLU SEQRES 23 B 361 ALA PHE LEU PHE GLY PRO VAL ASP GLU MSE GLY LEU ASP SEQRES 24 B 361 PRO ASN MSE ASP SER TRP PRO LEU ASP GLN ASN ALA ILE SEQRES 25 B 361 VAL GLN ILE LEU ASN SER GLN SER TRP SER ASP LEU GLU SEQRES 26 B 361 TRP SER GLU GLY ASP ASP GLU ALA ALA VAL GLU SER ALA SEQRES 27 B 361 GLN ASN VAL ARG GLY PHE HIS THR LEU GLU PHE LEU LEU SEQRES 28 B 361 TYR LYS ASN GLY GLU PRO ARG LYS VAL GLN MODRES 3N8U MSE A 51 MET SELENOMETHIONINE MODRES 3N8U MSE A 218 MET SELENOMETHIONINE MODRES 3N8U MSE A 319 MET SELENOMETHIONINE MODRES 3N8U MSE A 325 MET SELENOMETHIONINE MODRES 3N8U MSE B 51 MET SELENOMETHIONINE MODRES 3N8U MSE B 218 MET SELENOMETHIONINE MODRES 3N8U MSE B 319 MET SELENOMETHIONINE MODRES 3N8U MSE B 325 MET SELENOMETHIONINE HET MSE A 51 8 HET MSE A 218 8 HET MSE A 319 8 HET MSE A 325 8 HET MSE B 51 8 HET MSE B 218 8 HET MSE B 319 8 HET MSE B 325 8 HET MG A 1 1 HET MG A 2 1 HET CL A 5 1 HET EDO A 7 4 HET EDO A 12 7 HET MG B 3 1 HET CL B 4 1 HET EDO B 6 8 HET EDO B 8 4 HET EDO B 9 4 HET EDO B 10 4 HET EDO B 11 4 HETNAM MSE SELENOMETHIONINE HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 3 MG 3(MG 2+) FORMUL 5 CL 2(CL 1-) FORMUL 6 EDO 7(C2 H6 O2) FORMUL 15 HOH *1191(H2 O) HELIX 1 1 ASP A 33 ILE A 37 5 5 HELIX 2 2 ASN A 43 SER A 71 1 29 HELIX 3 3 SER A 78 HIS A 86 1 9 HELIX 4 4 SER A 93 ALA A 115 1 23 HELIX 5 5 ILE A 117 ALA A 126 1 10 HELIX 6 6 ASN A 128 ALA A 135 1 8 HELIX 7 7 HIS A 143 GLY A 161 1 19 HELIX 8 8 SER A 171 ASN A 180 1 10 HELIX 9 9 ASN A 180 ILE A 201 1 22 HELIX 10 10 PRO A 204 HIS A 208 5 5 HELIX 11 11 SER A 211 ASN A 230 1 20 HELIX 12 12 ASN A 230 ASN A 238 1 9 HELIX 13 13 ASN A 239 ASN A 242 5 4 HELIX 14 14 THR A 245 VAL A 260 1 16 HELIX 15 15 VAL A 260 ASN A 285 1 26 HELIX 16 16 SER A 287 LYS A 307 1 21 HELIX 17 17 SER A 308 PHE A 313 5 6 HELIX 18 18 GLY A 314 MSE A 319 1 6 HELIX 19 19 GLY A 320 SER A 327 1 8 HELIX 20 20 ASP A 331 GLN A 342 1 12 HELIX 21 21 SER A 343 GLU A 348 5 6 HELIX 22 22 ASP A 354 ASN A 363 1 10 HELIX 23 23 ARG A 365 LEU A 374 1 10 HELIX 24 24 ASP B 33 ILE B 37 5 5 HELIX 25 25 ASN B 43 SER B 71 1 29 HELIX 26 26 SER B 78 HIS B 86 1 9 HELIX 27 27 SER B 93 ALA B 115 1 23 HELIX 28 28 ILE B 117 ALA B 126 1 10 HELIX 29 29 ASN B 128 ALA B 135 1 8 HELIX 30 30 SER B 138 TRP B 142 5 5 HELIX 31 31 HIS B 143 GLY B 161 1 19 HELIX 32 32 SER B 171 ASN B 180 1 10 HELIX 33 33 ASN B 180 ASP B 200 1 21 HELIX 34 34 PRO B 204 HIS B 208 5 5 HELIX 35 35 SER B 211 ASN B 230 1 20 HELIX 36 36 ASN B 230 ASN B 238 1 9 HELIX 37 37 ASN B 239 ASN B 242 5 4 HELIX 38 38 THR B 245 VAL B 260 1 16 HELIX 39 39 VAL B 260 ASN B 285 1 26 HELIX 40 40 SER B 287 LYS B 307 1 21 HELIX 41 41 SER B 308 PHE B 313 5 6 HELIX 42 42 GLY B 314 MSE B 319 1 6 HELIX 43 43 GLY B 320 SER B 327 1 8 HELIX 44 44 ASP B 331 GLN B 342 1 12 HELIX 45 45 SER B 343 GLU B 348 5 6 HELIX 46 46 ASP B 354 ASN B 363 1 10 HELIX 47 47 ARG B 365 LEU B 374 1 10 SHEET 1 A 2 TYR A 375 LYS A 376 0 SHEET 2 A 2 GLU A 379 PRO A 380 -1 O GLU A 379 N LYS A 376 SHEET 1 B 2 TYR B 375 LYS B 376 0 SHEET 2 B 2 GLU B 379 PRO B 380 -1 O GLU B 379 N LYS B 376 LINK C TYR A 50 N MSE A 51 1555 1555 1.35 LINK C MSE A 51 N ARG A 52 1555 1555 1.36 LINK C ALA A 217 N MSE A 218 1555 1555 1.35 LINK C MSE A 218 N ASP A 219 1555 1555 1.35 LINK C GLU A 318 N MSE A 319 1555 1555 1.35 LINK C MSE A 319 N GLY A 320 1555 1555 1.33 LINK C ASN A 324 N MSE A 325 1555 1555 1.35 LINK C MSE A 325 N ASP A 326 1555 1555 1.33 LINK C TYR B 50 N MSE B 51 1555 1555 1.36 LINK C MSE B 51 N ARG B 52 1555 1555 1.36 LINK C ALA B 217 N MSE B 218 1555 1555 1.36 LINK C MSE B 218 N ASP B 219 1555 1555 1.36 LINK C GLU B 318 N MSE B 319 1555 1555 1.34 LINK C MSE B 319 N GLY B 320 1555 1555 1.35 LINK C ASN B 324 N MSE B 325 1555 1555 1.34 LINK C MSE B 325 N ASP B 326 1555 1555 1.34 LINK MG MG A 1 O HOH A 527 1555 1555 2.06 LINK MG MG A 1 O HOH A 543 1555 1555 2.12 LINK MG MG A 1 O HOH A 572 1555 1555 2.02 LINK MG MG A 1 O HOH A 578 1555 1555 2.12 LINK MG MG A 1 O HOH A 620 1555 1555 2.07 LINK MG MG A 1 O HOH A 662 1555 1555 2.13 LINK MG MG A 2 O HOH A 570 1555 1555 2.31 LINK MG MG A 2 O HOH A 876 1555 1555 1.99 LINK MG MG A 2 O AHOH A1179 1555 1555 1.94 LINK MG MG A 2 O HOH B 416 1555 1555 2.69 LINK MG MG A 2 O HOH B 526 1555 1555 2.34 LINK MG MG A 2 O HOH B 536 1555 1555 1.95 LINK MG MG B 3 O HOH B 426 1555 1555 2.06 LINK MG MG B 3 O HOH B 466 1555 1555 2.10 LINK MG MG B 3 O HOH B 483 1555 1555 1.94 LINK MG MG B 3 O HOH B 495 1555 1555 2.05 LINK MG MG B 3 O HOH B 516 1555 1555 2.06 LINK MG MG B 3 O HOH B 556 1555 1555 1.93 CISPEP 1 SER A 89 PRO A 90 0 -8.62 CISPEP 2 GLN A 203 PRO A 204 0 -7.54 CISPEP 3 TRP A 328 PRO A 329 0 -3.89 CISPEP 4 SER B 89 PRO B 90 0 4.52 CISPEP 5 SER B 89 PRO B 90 0 7.05 CISPEP 6 GLN B 203 PRO B 204 0 -1.74 CISPEP 7 TRP B 328 PRO B 329 0 -4.67 SITE 1 AC1 7 GLU A 111 HOH A 527 HOH A 543 HOH A 572 SITE 2 AC1 7 HOH A 578 HOH A 620 HOH A 662 SITE 1 AC2 6 HOH A 570 HOH A 876 HOH A1179 HOH B 416 SITE 2 AC2 6 HOH B 526 HOH B 536 SITE 1 AC3 5 TRP A 142 SER A 144 PRO A 204 ARG A 206 SITE 2 AC3 5 HOH A 524 SITE 1 AC4 4 PRO A 329 LEU A 330 ASP A 331 ASN A 363 SITE 1 AC5 11 ASN A 110 THR A 114 GLY A 118 ASP A 119 SITE 2 AC5 11 ASN A 122 GLU A 225 LYS A 229 HOH A 656 SITE 3 AC5 11 HOH A 665 HOH A 759 HOH A 828 SITE 1 AC6 6 HOH B 426 HOH B 466 HOH B 483 HOH B 495 SITE 2 AC6 6 HOH B 516 HOH B 556 SITE 1 AC7 3 TRP B 142 SER B 144 ARG B 206 SITE 1 AC8 5 LYS B 104 GLU B 107 ASP B 317 HOH B 851 SITE 2 AC8 5 HOH B1104 SITE 1 AC9 6 SER B 72 GLY B 75 GLY B 76 HOH B 661 SITE 2 AC9 6 HOH B 676 HOH B 722 SITE 1 BC1 4 THR B 264 GLU B 303 LYS B 307 HOH B 544 SITE 1 BC2 2 ASN B 150 GLN B 199 SITE 1 BC3 3 GLN B 203 PRO B 204 ASN B 207 CRYST1 131.470 49.930 128.320 90.00 117.58 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007606 0.000000 0.003973 0.00000 SCALE2 0.000000 0.020028 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008792 0.00000