HEADER IMMUNE SYSTEM 01-JUN-10 3NAC TITLE CRYSTAL STRUCTURE OF FAB15 MUT7 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FAB15 MUT7 LIGHT CHAIN; COMPND 3 CHAIN: L; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: FAB15 MUT7 HEAVY CHAIN; COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 6 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_TAXID: 9606; SOURCE 10 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM_CELL_LINE: HEK293 KEYWDS ANTIBODY, ANTIBODY CANONICAL STRUCTURE, THERMAL STABILITY, NON-X-PRO KEYWDS 2 CIS PEPTIDE BOND, ANTIBODY ENGINEERING, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR J.LUO REVDAT 3 06-SEP-23 3NAC 1 REMARK REVDAT 2 31-MAR-21 3NAC 1 SOURCE REMARK LINK REVDAT 1 18-AUG-10 3NAC 0 JRNL AUTH J.LUO,Y.FENG,G.L.GILLILAND JRNL TITL CO-EVOLUTION OF ANTIBODY STABILITY AND VK CDR-L3 CANONICAL JRNL TITL 2 STRUCTURE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.1_357) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.56 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.010 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 46820 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.240 REMARK 3 FREE R VALUE TEST SET COUNT : 2453 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.5671 - 4.7142 0.93 2377 134 0.1858 0.2175 REMARK 3 2 4.7142 - 3.7430 0.98 2479 135 0.1555 0.1831 REMARK 3 3 3.7430 - 3.2702 0.99 2486 139 0.1724 0.1840 REMARK 3 4 3.2702 - 2.9713 0.99 2482 137 0.1739 0.1949 REMARK 3 5 2.9713 - 2.7584 1.00 2478 136 0.1887 0.2206 REMARK 3 6 2.7584 - 2.5958 1.00 2512 142 0.1890 0.2290 REMARK 3 7 2.5958 - 2.4659 1.00 2490 135 0.1843 0.2086 REMARK 3 8 2.4659 - 2.3586 1.00 2468 142 0.1838 0.1953 REMARK 3 9 2.3586 - 2.2678 1.00 2494 135 0.1786 0.2441 REMARK 3 10 2.2678 - 2.1895 1.00 2447 141 0.1820 0.2247 REMARK 3 11 2.1895 - 2.1211 0.99 2489 139 0.1732 0.2106 REMARK 3 12 2.1211 - 2.0604 0.99 2480 137 0.1722 0.2046 REMARK 3 13 2.0604 - 2.0062 0.99 2446 139 0.1774 0.2399 REMARK 3 14 2.0062 - 1.9573 0.99 2449 139 0.1890 0.1950 REMARK 3 15 1.9573 - 1.9128 0.99 2448 126 0.1974 0.2455 REMARK 3 16 1.9128 - 1.8721 0.98 2469 128 0.2096 0.2804 REMARK 3 17 1.8721 - 1.8346 0.98 2448 134 0.2340 0.2849 REMARK 3 18 1.8346 - 1.8000 0.98 2425 135 0.2345 0.2692 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 59.74 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.50240 REMARK 3 B22 (A**2) : 5.26660 REMARK 3 B33 (A**2) : 0.23570 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -5.05470 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3525 REMARK 3 ANGLE : 1.094 4797 REMARK 3 CHIRALITY : 0.078 535 REMARK 3 PLANARITY : 0.004 610 REMARK 3 DIHEDRAL : 13.527 1278 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN L AND RESSEQ 1:109 REMARK 3 ORIGIN FOR THE GROUP (A): 36.4467 5.6361 24.2537 REMARK 3 T TENSOR REMARK 3 T11: 0.2558 T22: 0.1717 REMARK 3 T33: 0.2102 T12: 0.0123 REMARK 3 T13: -0.0250 T23: -0.0166 REMARK 3 L TENSOR REMARK 3 L11: 1.9943 L22: 0.3901 REMARK 3 L33: 1.9929 L12: 0.1124 REMARK 3 L13: -0.0391 L23: -0.8698 REMARK 3 S TENSOR REMARK 3 S11: -0.0599 S12: -0.2335 S13: 0.1962 REMARK 3 S21: 0.2570 S22: 0.0219 S23: -0.1520 REMARK 3 S31: -0.1636 S32: 0.0038 S33: 0.0001 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN L AND RESSEQ 110:214 REMARK 3 ORIGIN FOR THE GROUP (A): 9.1344 8.7031 0.4189 REMARK 3 T TENSOR REMARK 3 T11: 0.1539 T22: 0.1536 REMARK 3 T33: 0.1754 T12: 0.0061 REMARK 3 T13: 0.0130 T23: 0.0150 REMARK 3 L TENSOR REMARK 3 L11: 2.5157 L22: 1.2668 REMARK 3 L33: 0.4683 L12: -0.6711 REMARK 3 L13: 0.4119 L23: -0.3826 REMARK 3 S TENSOR REMARK 3 S11: -0.0281 S12: 0.2730 S13: 0.3313 REMARK 3 S21: -0.0628 S22: -0.0023 S23: 0.0416 REMARK 3 S31: -0.0464 S32: 0.0902 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN H AND RESSEQ 1:112 REMARK 3 ORIGIN FOR THE GROUP (A): 22.5403 -6.1926 36.7420 REMARK 3 T TENSOR REMARK 3 T11: 0.3326 T22: 0.4408 REMARK 3 T33: 0.2194 T12: -0.0136 REMARK 3 T13: -0.0023 T23: 0.1133 REMARK 3 L TENSOR REMARK 3 L11: 2.5881 L22: 0.6006 REMARK 3 L33: 1.6868 L12: 1.0182 REMARK 3 L13: 0.3303 L23: 0.0590 REMARK 3 S TENSOR REMARK 3 S11: 0.0642 S12: -0.8398 S13: -0.2964 REMARK 3 S21: 0.2434 S22: -0.0068 S23: -0.1055 REMARK 3 S31: 0.1320 S32: -0.3374 S33: 0.0008 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN H AND RESSEQ 113:225 REMARK 3 ORIGIN FOR THE GROUP (A): 7.6533 -6.2905 1.3610 REMARK 3 T TENSOR REMARK 3 T11: 0.0881 T22: 0.0105 REMARK 3 T33: 0.1134 T12: -0.0025 REMARK 3 T13: -0.0090 T23: -0.0199 REMARK 3 L TENSOR REMARK 3 L11: 3.1835 L22: 1.2339 REMARK 3 L33: 0.8164 L12: 0.2837 REMARK 3 L13: 0.2363 L23: 0.7806 REMARK 3 S TENSOR REMARK 3 S11: 0.0548 S12: 0.2445 S13: -0.2434 REMARK 3 S21: -0.1981 S22: -0.0201 S23: 0.1512 REMARK 3 S31: 0.0202 S32: -0.0160 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3NAC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JUN-10. REMARK 100 THE DEPOSITION ID IS D_1000059579. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-MAR-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : ACCEL SI (111) DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46820 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 46.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.39600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3NA9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE, 12% PEG MME REMARK 280 5000, 0.2 M ZINC ACETATE, PH 6.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 37.21850 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -234.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ARG L 211 O HOH L 268 1.85 REMARK 500 O HOH L 295 O HOH L 357 1.91 REMARK 500 O HOH H 236 O HOH H 391 1.92 REMARK 500 O HOH L 423 O HOH H 286 1.92 REMARK 500 O HOH L 322 O HOH H 296 1.93 REMARK 500 O HOH L 222 O HOH L 425 1.96 REMARK 500 O HOH L 276 O HOH L 399 1.98 REMARK 500 O HOH H 246 O HOH H 399 1.98 REMARK 500 O HOH L 319 O HOH H 409 1.99 REMARK 500 O HOH L 352 O HOH L 361 2.01 REMARK 500 O HOH H 296 O HOH H 353 2.05 REMARK 500 O HOH L 267 O HOH H 334 2.06 REMARK 500 OG SER H 74 O HOH H 290 2.07 REMARK 500 O HOH H 295 O HOH H 302 2.08 REMARK 500 O HOH H 238 O HOH H 395 2.09 REMARK 500 O HOH L 346 O HOH H 309 2.11 REMARK 500 O HOH L 342 O HOH L 349 2.11 REMARK 500 O HOH H 371 O HOH H 378 2.15 REMARK 500 NH1 ARG L 142 O HOH L 338 2.16 REMARK 500 NH1 ARG L 142 O HOH L 277 2.16 REMARK 500 OE1 GLU L 187 O HOH L 418 2.18 REMARK 500 O HOH L 390 O HOH L 432 2.19 REMARK 500 O HOH H 418 O HOH H 424 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH L 323 O HOH H 258 1656 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA L 51 -41.26 71.42 REMARK 500 ALA L 84 178.65 179.82 REMARK 500 ASP H 54 6.08 -150.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN L 216 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN L 137 OD1 REMARK 620 2 ASN L 138 OD1 94.2 REMARK 620 3 HIS H 164 NE2 109.6 84.1 REMARK 620 4 HOH H 286 O 167.2 85.0 83.1 REMARK 620 5 HOH H 419 O 80.4 167.9 107.9 97.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN L 215 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP L 151 OD1 REMARK 620 2 HIS L 189 ND1 107.7 REMARK 620 3 ACT L 217 OXT 96.1 109.6 REMARK 620 4 ACT L 217 O 146.5 83.3 50.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN H 218 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS L 214 O REMARK 620 2 HIS H 213 NE2 114.0 REMARK 620 3 HIS H 215 ND1 110.0 116.3 REMARK 620 4 HOH H 236 O 96.6 114.6 103.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN H 220 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH L 322 O REMARK 620 2 HIS H 217 NE2 86.3 REMARK 620 3 HOH H 264 O 178.1 95.1 REMARK 620 4 HOH H 296 O 47.0 53.6 134.9 REMARK 620 5 HOH H 343 O 84.1 82.6 94.7 109.8 REMARK 620 6 HOH H 353 O 85.3 87.5 96.1 56.1 165.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN H 222 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS H 66 NE2 REMARK 620 2 HOH H 411 O 157.3 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN H 221 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS H 212 NE2 REMARK 620 2 HIS H 214 ND1 126.4 REMARK 620 3 HOH H 310 O 91.2 109.4 REMARK 620 4 HOH H 414 O 100.0 112.9 115.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN H 219 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS H 214 NE2 REMARK 620 2 HIS H 216 NE2 102.2 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN L 215 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN L 216 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT L 217 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL L 218 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN H 218 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN H 219 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN H 220 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN H 221 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN H 222 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL H 223 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL H 224 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3NCJ RELATED DB: PDB REMARK 900 RELATED ID: 3NAA RELATED DB: PDB REMARK 900 RELATED ID: 3NAB RELATED DB: PDB REMARK 900 RELATED ID: 3NA9 RELATED DB: PDB DBREF 3NAC L 1 214 PDB 3NAC 3NAC 1 214 DBREF 3NAC H 1 217 PDB 3NAC 3NAC 1 217 SEQRES 1 L 214 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 L 214 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 L 214 GLN SER ILE GLY LEU TYR LEU ALA TRP TYR GLN GLN LYS SEQRES 4 L 214 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR ALA ALA SER SEQRES 5 L 214 SER LEU GLN SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 214 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 L 214 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN GLY SEQRES 8 L 214 ASN THR LEU SER TYR THR PHE GLY GLN GLY THR LYS VAL SEQRES 9 L 214 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 L 214 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 L 214 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 L 214 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 L 214 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 L 214 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 L 214 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 L 214 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 L 214 PHE ASN ARG GLY GLU CYS SEQRES 1 H 225 GLU VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 H 225 PRO GLY GLU SER LEU LYS ILE SER CYS LYS GLY SER GLY SEQRES 3 H 225 TYR SER PHE THR ASN TYR TRP ILE SER TRP VAL ARG GLN SEQRES 4 H 225 MET PRO GLY LYS GLY LEU GLU TRP MET GLY ARG ILE ASP SEQRES 5 H 225 PRO SER ASP SER TYR THR ASN TYR SER PRO SER PHE GLN SEQRES 6 H 225 GLY HIS VAL THR ILE SER ALA ASP LYS SER ILE SER THR SEQRES 7 H 225 ALA TYR LEU GLN TRP SER SER LEU LYS ALA SER ASP THR SEQRES 8 H 225 ALA MET TYR TYR CYS ALA ARG GLN LEU TYR GLN GLY TYR SEQRES 9 H 225 MET ASP THR PHE ASP SER TRP GLY GLN GLY THR LEU VAL SEQRES 10 H 225 THR VAL SER SER ALA SER THR LYS GLY PRO SER VAL PHE SEQRES 11 H 225 PRO LEU ALA PRO CYS SER ARG SER THR SER GLU SER THR SEQRES 12 H 225 ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU SEQRES 13 H 225 PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER SEQRES 14 H 225 GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY SEQRES 15 H 225 LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SER SER SEQRES 16 H 225 SER LEU GLY THR LYS THR TYR THR CYS ASN VAL ASP HIS SEQRES 17 H 225 LYS PRO SER ASN THR LYS VAL ASP LYS ARG VAL HIS HIS SEQRES 18 H 225 HIS HIS HIS HIS HET ZN L 215 1 HET ZN L 216 1 HET ACT L 217 4 HET GOL L 218 6 HET ZN H 218 1 HET ZN H 219 1 HET ZN H 220 1 HET ZN H 221 1 HET ZN H 222 1 HET GOL H 223 6 HET GOL H 224 6 HETNAM ZN ZINC ION HETNAM ACT ACETATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 ZN 7(ZN 2+) FORMUL 5 ACT C2 H3 O2 1- FORMUL 6 GOL 3(C3 H8 O3) FORMUL 14 HOH *413(H2 O) HELIX 1 1 GLN L 79 PHE L 83 5 5 HELIX 2 2 SER L 121 SER L 127 1 7 HELIX 3 3 LYS L 183 HIS L 189 1 7 HELIX 4 4 SER H 28 TYR H 32 5 5 HELIX 5 5 LYS H 73 ILE H 75 5 3 HELIX 6 6 LYS H 83 THR H 87 5 5 HELIX 7 7 SER H 156 ALA H 158 5 3 HELIX 8 8 SER H 187 LEU H 189 5 3 SHEET 1 A 4 MET L 4 SER L 7 0 SHEET 2 A 4 VAL L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 A 4 ASP L 70 ILE L 75 -1 O ILE L 75 N VAL L 19 SHEET 4 A 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 B 6 SER L 10 ALA L 13 0 SHEET 2 B 6 THR L 102 ILE L 106 1 O GLU L 105 N LEU L 11 SHEET 3 B 6 ALA L 84 GLN L 90 -1 N ALA L 84 O VAL L 104 SHEET 4 B 6 LEU L 33 GLN L 38 -1 N GLN L 38 O THR L 85 SHEET 5 B 6 LYS L 45 TYR L 49 -1 O LEU L 47 N TRP L 35 SHEET 6 B 6 SER L 53 LEU L 54 -1 O SER L 53 N TYR L 49 SHEET 1 C 4 SER L 10 ALA L 13 0 SHEET 2 C 4 THR L 102 ILE L 106 1 O GLU L 105 N LEU L 11 SHEET 3 C 4 ALA L 84 GLN L 90 -1 N ALA L 84 O VAL L 104 SHEET 4 C 4 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 1 D 4 SER L 114 PHE L 118 0 SHEET 2 D 4 THR L 129 PHE L 139 -1 O VAL L 133 N PHE L 118 SHEET 3 D 4 TYR L 173 SER L 182 -1 O LEU L 179 N VAL L 132 SHEET 4 D 4 SER L 159 VAL L 163 -1 N GLN L 160 O THR L 178 SHEET 1 E 4 ALA L 153 LEU L 154 0 SHEET 2 E 4 LYS L 145 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 E 4 VAL L 191 THR L 197 -1 O GLU L 195 N GLN L 147 SHEET 4 E 4 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SHEET 1 F 4 GLN H 3 GLN H 6 0 SHEET 2 F 4 LEU H 18 SER H 25 -1 O SER H 25 N GLN H 3 SHEET 3 F 4 THR H 77 TRP H 82 -1 O ALA H 78 N CYS H 22 SHEET 4 F 4 THR H 68 ASP H 72 -1 N ASP H 72 O THR H 77 SHEET 1 G 6 GLU H 10 LYS H 12 0 SHEET 2 G 6 THR H 107 VAL H 111 1 O THR H 110 N LYS H 12 SHEET 3 G 6 ALA H 88 GLN H 98 -1 N ALA H 88 O VAL H 109 SHEET 4 G 6 ILE H 34 GLN H 39 -1 N SER H 35 O ALA H 93 SHEET 5 G 6 GLU H 46 ILE H 51 -1 O MET H 48 N TRP H 36 SHEET 6 G 6 THR H 57 TYR H 59 -1 O ASN H 58 N ARG H 50 SHEET 1 H 4 GLU H 10 LYS H 12 0 SHEET 2 H 4 THR H 107 VAL H 111 1 O THR H 110 N LYS H 12 SHEET 3 H 4 ALA H 88 GLN H 98 -1 N ALA H 88 O VAL H 109 SHEET 4 H 4 MET H 100A TRP H 103 -1 O SER H 102 N ARG H 94 SHEET 1 I 4 SER H 120 LEU H 124 0 SHEET 2 I 4 THR H 135 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 I 4 TYR H 176 PRO H 185 -1 O LEU H 178 N VAL H 142 SHEET 4 I 4 VAL H 163 THR H 165 -1 N HIS H 164 O VAL H 181 SHEET 1 J 4 SER H 120 LEU H 124 0 SHEET 2 J 4 THR H 135 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 J 4 TYR H 176 PRO H 185 -1 O LEU H 178 N VAL H 142 SHEET 4 J 4 VAL H 169 LEU H 170 -1 N VAL H 169 O SER H 177 SHEET 1 K 3 THR H 151 TRP H 154 0 SHEET 2 K 3 THR H 195 HIS H 200 -1 O ASN H 197 N SER H 153 SHEET 3 K 3 THR H 205 ARG H 210 -1 O VAL H 207 N VAL H 198 SSBOND 1 CYS L 23 CYS L 88 1555 1555 2.04 SSBOND 2 CYS L 134 CYS L 194 1555 1555 2.03 SSBOND 3 CYS L 214 CYS H 127 1555 1555 2.03 SSBOND 4 CYS H 22 CYS H 92 1555 1555 2.04 SSBOND 5 CYS H 140 CYS H 196 1555 1555 2.04 LINK OD1 ASN L 137 ZN ZN L 216 1555 1555 2.30 LINK OD1 ASN L 138 ZN ZN L 216 1555 1555 2.32 LINK OD1 ASP L 151 ZN ZN L 215 1555 1555 1.88 LINK ND1 HIS L 189 ZN ZN L 215 1555 1555 2.14 LINK O CYS L 214 ZN ZN H 218 1555 1555 2.00 LINK ZN ZN L 215 OXT ACT L 217 1555 1555 2.12 LINK ZN ZN L 215 O ACT L 217 1555 1555 2.67 LINK ZN ZN L 216 NE2 HIS H 164 1555 1555 2.25 LINK ZN ZN L 216 O HOH H 286 1555 1555 2.41 LINK ZN ZN L 216 O HOH H 419 1555 1555 2.25 LINK O HOH L 322 ZN ZN H 220 1555 1555 2.50 LINK NE2 HIS H 66 ZN ZN H 222 1555 1555 2.26 LINK NE2 HIS H 212 ZN ZN H 221 1555 1555 2.22 LINK NE2 HIS H 213 ZN ZN H 218 1555 1555 2.10 LINK NE2 HIS H 214 ZN ZN H 219 1555 1555 2.08 LINK ND1 HIS H 214 ZN ZN H 221 1555 1555 2.06 LINK ND1 HIS H 215 ZN ZN H 218 1555 1555 2.13 LINK NE2 HIS H 216 ZN ZN H 219 1555 1555 2.04 LINK NE2 HIS H 217 ZN ZN H 220 1555 1555 2.65 LINK ZN ZN H 218 O HOH H 236 1555 1555 2.00 LINK ZN ZN H 220 O HOH H 264 1555 1555 1.93 LINK ZN ZN H 220 O HOH H 296 1555 1555 2.31 LINK ZN ZN H 220 O HOH H 343 1555 1555 2.16 LINK ZN ZN H 220 O HOH H 353 1555 1555 2.02 LINK ZN ZN H 221 O HOH H 310 1555 1555 2.52 LINK ZN ZN H 221 O HOH H 414 1555 1555 2.27 LINK ZN ZN H 222 O HOH H 411 1555 1555 2.43 CISPEP 1 SER L 7 PRO L 8 0 -6.30 CISPEP 2 LEU L 94 SER L 95 0 -0.44 CISPEP 3 TYR L 140 PRO L 141 0 4.18 CISPEP 4 PHE H 146 PRO H 147 0 -7.87 CISPEP 5 GLU H 148 PRO H 149 0 -1.71 SITE 1 AC1 3 ASP L 151 HIS L 189 ACT L 217 SITE 1 AC2 6 HIS H 164 HOH H 286 HOH H 292 HOH H 419 SITE 2 AC2 6 ASN L 137 ASN L 138 SITE 1 AC3 4 ASP L 151 LYS L 188 HIS L 189 ZN L 215 SITE 1 AC4 12 PHE H 166 PRO H 167 VAL H 169 SER H 177 SITE 2 AC4 12 LEU H 178 SER H 179 GLN L 160 SER L 162 SITE 3 AC4 12 SER L 176 THR L 178 HOH L 298 HOH L 406 SITE 1 AC5 5 HIS H 213 HIS H 215 HIS H 217 HOH H 236 SITE 2 AC5 5 CYS L 214 SITE 1 AC6 4 ASP H 52 ASP H 54 HIS H 214 HIS H 216 SITE 1 AC7 6 HIS H 217 HOH H 264 HOH H 296 HOH H 343 SITE 2 AC7 6 HOH H 353 HOH L 322 SITE 1 AC8 4 HIS H 212 HIS H 214 HOH H 310 HOH H 414 SITE 1 AC9 2 HIS H 66 HOH H 411 SITE 1 BC1 6 TRP H 33 ASP H 52 HIS H 213 HIS H 214 SITE 2 BC1 6 HIS H 215 HOH H 396 SITE 1 BC2 7 PRO H 123 LEU H 124 ALA H 125 HIS H 213 SITE 2 BC2 7 HIS H 214 PRO L 119 HOH L 318 CRYST1 54.663 74.437 65.764 90.00 104.25 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018294 0.000000 0.004646 0.00000 SCALE2 0.000000 0.013434 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015689 0.00000