data_3NDT # _entry.id 3NDT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3NDT pdb_00003ndt 10.2210/pdb3ndt/pdb RCSB RCSB059703 ? ? WWPDB D_1000059703 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3NDT _pdbx_database_status.recvd_initial_deposition_date 2010-06-08 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Geremia, S.' 1 'Olajuyigbe, F.M.' 2 'Demitri, N.' 3 # _citation.id primary _citation.title ;Investigation of 2-Fold Disorder of Inhibitors and Relative Potency by Crystallizations of HIV-1 Protease in Ritonavir and Saquinavir Mixtures ; _citation.journal_abbrev 'Cryst.Growth Des.' _citation.journal_volume 11 _citation.page_first 4378 _citation.page_last 4385 _citation.year 2011 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1528-7483 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI 10.1021/cg200514z # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Olajuyigbe, F.M.' 1 ? primary 'Demitri, N.' 2 ? primary 'Geremia, S.' 3 ? # _cell.entry_id 3NDT _cell.length_a 51.294 _cell.length_b 62.785 _cell.length_c 59.171 _cell.angle_alpha 90.00 _cell.angle_beta 98.32 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3NDT _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Protease 10767.702 4 3.4.23.16 ? ? ? 2 non-polymer syn ;(2S)-N-[(2S,3R)-4-[(2S,3S,4aS,8aS)-3-(tert-butylcarbamoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-2-yl]-3-hydroxy-1 -phenyl-butan-2-yl]-2-(quinolin-2-ylcarbonylamino)butanediamide ; 670.841 2 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 7 ? ? ? ? 4 non-polymer syn 'DIMETHYL SULFOXIDE' 78.133 4 ? ? ? ? 5 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 6 water nat water 18.015 135 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PR, Retropepsin' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(ARF)PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGIGGFIKVRQYDQIIIEIAGHKAIGTV LVGPTPVNIIGRNLLTQIGATLNF ; _entity_poly.pdbx_seq_one_letter_code_can ;XPQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGIGGFIKVRQYDQIIIEIAGHKAIGTVLVGP TPVNIIGRNLLTQIGATLNF ; _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ARF n 1 2 PRO n 1 3 GLN n 1 4 ILE n 1 5 THR n 1 6 LEU n 1 7 TRP n 1 8 LYS n 1 9 ARG n 1 10 PRO n 1 11 LEU n 1 12 VAL n 1 13 THR n 1 14 ILE n 1 15 LYS n 1 16 ILE n 1 17 GLY n 1 18 GLY n 1 19 GLN n 1 20 LEU n 1 21 LYS n 1 22 GLU n 1 23 ALA n 1 24 LEU n 1 25 LEU n 1 26 ASP n 1 27 THR n 1 28 GLY n 1 29 ALA n 1 30 ASP n 1 31 ASP n 1 32 THR n 1 33 VAL n 1 34 ILE n 1 35 GLU n 1 36 GLU n 1 37 MET n 1 38 SER n 1 39 LEU n 1 40 PRO n 1 41 GLY n 1 42 ARG n 1 43 TRP n 1 44 LYS n 1 45 PRO n 1 46 LYS n 1 47 MET n 1 48 ILE n 1 49 GLY n 1 50 GLY n 1 51 ILE n 1 52 GLY n 1 53 GLY n 1 54 PHE n 1 55 ILE n 1 56 LYS n 1 57 VAL n 1 58 ARG n 1 59 GLN n 1 60 TYR n 1 61 ASP n 1 62 GLN n 1 63 ILE n 1 64 ILE n 1 65 ILE n 1 66 GLU n 1 67 ILE n 1 68 ALA n 1 69 GLY n 1 70 HIS n 1 71 LYS n 1 72 ALA n 1 73 ILE n 1 74 GLY n 1 75 THR n 1 76 VAL n 1 77 LEU n 1 78 VAL n 1 79 GLY n 1 80 PRO n 1 81 THR n 1 82 PRO n 1 83 VAL n 1 84 ASN n 1 85 ILE n 1 86 ILE n 1 87 GLY n 1 88 ARG n 1 89 ASN n 1 90 LEU n 1 91 LEU n 1 92 THR n 1 93 GLN n 1 94 ILE n 1 95 GLY n 1 96 ALA n 1 97 THR n 1 98 LEU n 1 99 ASN n 1 100 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HIV-1 _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene gag-pol _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human immunodeficiency virus type 1 BH10' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11678 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code POL_HV1B1 _struct_ref.pdbx_db_accession P03366 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3NDT A 2 ? 100 ? P03366 1 ? 99 ? 2 100 2 1 3NDT B 2 ? 100 ? P03366 1 ? 99 ? 2 100 3 1 3NDT C 2 ? 100 ? P03366 1 ? 99 ? 1 99 4 1 3NDT D 2 ? 100 ? P03366 1 ? 99 ? 1 99 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3NDT ARF A 1 ? UNP P03366 ? ? insertion 1 1 1 3NDT LYS A 8 ? UNP P03366 GLN 7 'engineered mutation' 8 2 1 3NDT ILE A 34 ? UNP P03366 LEU 33 'engineered mutation' 34 3 1 3NDT ILE A 64 ? UNP P03366 LEU 63 'engineered mutation' 64 4 1 3NDT ALA A 68 ? UNP P03366 CYS 67 'engineered mutation' 68 5 1 3NDT ALA A 96 ? UNP P03366 CYS 95 'engineered mutation' 96 6 2 3NDT ARF B 1 ? UNP P03366 ? ? insertion 1 7 2 3NDT LYS B 8 ? UNP P03366 GLN 7 'engineered mutation' 8 8 2 3NDT ILE B 34 ? UNP P03366 LEU 33 'engineered mutation' 34 9 2 3NDT ILE B 64 ? UNP P03366 LEU 63 'engineered mutation' 64 10 2 3NDT ALA B 68 ? UNP P03366 CYS 67 'engineered mutation' 68 11 2 3NDT ALA B 96 ? UNP P03366 CYS 95 'engineered mutation' 96 12 3 3NDT ARF C 1 ? UNP P03366 ? ? insertion 0 13 3 3NDT LYS C 8 ? UNP P03366 GLN 7 'engineered mutation' 7 14 3 3NDT ILE C 34 ? UNP P03366 LEU 33 'engineered mutation' 33 15 3 3NDT ILE C 64 ? UNP P03366 LEU 63 'engineered mutation' 63 16 3 3NDT ALA C 68 ? UNP P03366 CYS 67 'engineered mutation' 67 17 3 3NDT ALA C 96 ? UNP P03366 CYS 95 'engineered mutation' 95 18 4 3NDT ARF D 1 ? UNP P03366 ? ? insertion 0 19 4 3NDT LYS D 8 ? UNP P03366 GLN 7 'engineered mutation' 7 20 4 3NDT ILE D 34 ? UNP P03366 LEU 33 'engineered mutation' 33 21 4 3NDT ILE D 64 ? UNP P03366 LEU 63 'engineered mutation' 63 22 4 3NDT ALA D 68 ? UNP P03366 CYS 67 'engineered mutation' 67 23 4 3NDT ALA D 96 ? UNP P03366 CYS 95 'engineered mutation' 95 24 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARF 'L-peptide NH3 amino terminus' . FORMAMIDE ? 'C H3 N O' 45.041 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DMS non-polymer . 'DIMETHYL SULFOXIDE' ? 'C2 H6 O S' 78.133 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 ROC peptide-like . ;(2S)-N-[(2S,3R)-4-[(2S,3S,4aS,8aS)-3-(tert-butylcarbamoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-2-yl]-3-hydroxy-1 -phenyl-butan-2-yl]-2-(quinolin-2-ylcarbonylamino)butanediamide ; 'Fortovase; SAQUINAVIR; RO 31-8959' 'C38 H50 N6 O5' 670.841 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3NDT _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.19 _exptl_crystal.density_percent_sol 43.81 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6 _exptl_crystal_grow.pdbx_details 'AMMONIUM SULFATE, DMSO, SODIUM CITRATE, pH 6, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2008-01-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator SI _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.2 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ELETTRA BEAMLINE 5.2R' _diffrn_source.pdbx_synchrotron_site ELETTRA _diffrn_source.pdbx_synchrotron_beamline 5.2R _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.2 # _reflns.entry_id 3NDT _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 5.00 _reflns.d_resolution_high 1.72 _reflns.number_obs 24746 _reflns.number_all 34735 _reflns.percent_possible_obs 91.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 3NDT _refine.ls_number_reflns_obs 24746 _refine.ls_number_reflns_all 34735 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 5.00 _refine.ls_d_res_high 1.72 _refine.ls_percent_reflns_obs 91.0 _refine.ls_R_factor_obs 0.1403 _refine.ls_R_factor_all 0.1275 _refine.ls_R_factor_R_work 0.1095 _refine.ls_R_factor_R_free 0.2294 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 1750 _refine.ls_number_parameters 31477 _refine.ls_number_restraints 41831 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method 'FREE R' _refine.details ? _refine.pdbx_starting_model 'pdb entry 3K4V' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3NDT _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 29 _refine_analyze.occupancy_sum_hydrogen 0.00 _refine_analyze.occupancy_sum_non_hydrogen 3287.75 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3030 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 123 _refine_hist.number_atoms_solvent 135 _refine_hist.number_atoms_total 3288 _refine_hist.d_res_high 1.72 _refine_hist.d_res_low 5.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.029 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.0289 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.038 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.108 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.009 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.005 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.074 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.084 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.entry_id 3NDT _pdbx_refine.R_factor_all_no_cutoff 0.1275 _pdbx_refine.R_factor_obs_no_cutoff ? _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_error_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff 0.1095 _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff 24746 # _struct.entry_id 3NDT _struct.title 'HIV-1 Protease Saquinavir:Ritonavir 1:1 complex structure' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3NDT _struct_keywords.pdbx_keywords 'hydrolase/hydrolase inhibitor' _struct_keywords.text 'HYDROLASE, AIDS, ASPARTYL PROTEASE, CARBAMYLATION, hydrolase-hydrolase inhibitor complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 5 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 3 ? O N N 5 ? P N N 3 ? Q N N 4 ? R N N 4 ? S N N 2 ? T N N 6 ? U N N 6 ? V N N 6 ? W N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 87 ? THR A 92 ? GLY A 87 THR A 92 1 ? 6 HELX_P HELX_P2 2 GLY B 87 ? GLY B 95 ? GLY B 87 GLY B 95 1 ? 9 HELX_P HELX_P3 3 GLY C 87 ? THR C 92 ? GLY C 86 THR C 91 1 ? 6 HELX_P HELX_P4 4 GLY D 87 ? GLY D 95 ? GLY D 86 GLY D 94 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? A ARF 1 C ? ? ? 1_555 A PRO 2 N ? ? A ARF 1 A PRO 2 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale2 covale one ? B ARF 1 C ? ? ? 1_555 B PRO 2 N ? ? B ARF 1 B PRO 2 1_555 ? ? ? ? ? ? ? 1.332 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 8 ? C ? 8 ? D ? 4 ? E ? 8 ? F ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? parallel C 4 5 ? anti-parallel C 5 6 ? parallel C 6 7 ? anti-parallel C 7 8 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? parallel E 4 5 ? anti-parallel E 5 6 ? parallel E 6 7 ? anti-parallel E 7 8 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? parallel F 4 5 ? anti-parallel F 5 6 ? parallel F 6 7 ? anti-parallel F 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 3 ? ILE A 4 ? GLN A 3 ILE A 4 A 2 THR B 97 ? ASN B 99 ? THR B 97 ASN B 99 A 3 THR A 97 ? ASN A 99 ? THR A 97 ASN A 99 A 4 GLN B 3 ? ILE B 4 ? GLN B 3 ILE B 4 B 1 TRP A 43 ? GLY A 50 ? TRP A 43 GLY A 50 B 2 GLY A 53 ? ILE A 67 ? GLY A 53 ILE A 67 B 3 HIS A 70 ? VAL A 78 ? HIS A 70 VAL A 78 B 4 VAL A 33 ? ILE A 34 ? VAL A 33 ILE A 34 B 5 ILE A 85 ? ILE A 86 ? ILE A 85 ILE A 86 B 6 GLN A 19 ? LEU A 25 ? GLN A 19 LEU A 25 B 7 LEU A 11 ? ILE A 16 ? LEU A 11 ILE A 16 B 8 GLY A 53 ? ILE A 67 ? GLY A 53 ILE A 67 C 1 TRP B 43 ? GLY B 50 ? TRP B 43 GLY B 50 C 2 GLY B 53 ? ILE B 67 ? GLY B 53 ILE B 67 C 3 HIS B 70 ? VAL B 78 ? HIS B 70 VAL B 78 C 4 VAL B 33 ? ILE B 34 ? VAL B 33 ILE B 34 C 5 ILE B 85 ? ILE B 86 ? ILE B 85 ILE B 86 C 6 GLN B 19 ? LEU B 25 ? GLN B 19 LEU B 25 C 7 LEU B 11 ? ILE B 16 ? LEU B 11 ILE B 16 C 8 GLY B 53 ? ILE B 67 ? GLY B 53 ILE B 67 D 1 GLN C 3 ? ILE C 4 ? GLN C 2 ILE C 3 D 2 THR D 97 ? ASN D 99 ? THR D 96 ASN D 98 D 3 THR C 97 ? ASN C 99 ? THR C 96 ASN C 98 D 4 GLN D 3 ? ILE D 4 ? GLN D 2 ILE D 3 E 1 TRP C 43 ? GLY C 50 ? TRP C 42 GLY C 49 E 2 GLY C 53 ? ILE C 67 ? GLY C 52 ILE C 66 E 3 HIS C 70 ? VAL C 78 ? HIS C 69 VAL C 77 E 4 VAL C 33 ? ILE C 34 ? VAL C 32 ILE C 33 E 5 ILE C 85 ? ILE C 86 ? ILE C 84 ILE C 85 E 6 GLN C 19 ? LEU C 25 ? GLN C 18 LEU C 24 E 7 LEU C 11 ? ILE C 16 ? LEU C 10 ILE C 15 E 8 GLY C 53 ? ILE C 67 ? GLY C 52 ILE C 66 F 1 LYS D 44 ? GLY D 50 ? LYS D 43 GLY D 49 F 2 GLY D 53 ? ILE D 67 ? GLY D 52 ILE D 66 F 3 HIS D 70 ? VAL D 78 ? HIS D 69 VAL D 77 F 4 VAL D 33 ? ILE D 34 ? VAL D 32 ILE D 33 F 5 ILE D 85 ? ILE D 86 ? ILE D 84 ILE D 85 F 6 GLN D 19 ? LEU D 25 ? GLN D 18 LEU D 24 F 7 LEU D 11 ? ILE D 16 ? LEU D 10 ILE D 15 F 8 GLY D 53 ? ILE D 67 ? GLY D 52 ILE D 66 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 4 ? N ILE A 4 O LEU B 98 ? O LEU B 98 A 2 3 O THR B 97 ? O THR B 97 N ASN A 99 ? N ASN A 99 A 3 4 N LEU A 98 ? N LEU A 98 O ILE B 4 ? O ILE B 4 B 1 2 N LYS A 46 ? N LYS A 46 O VAL A 57 ? O VAL A 57 B 2 3 N ILE A 67 ? N ILE A 67 O HIS A 70 ? O HIS A 70 B 3 4 O LEU A 77 ? O LEU A 77 N ILE A 34 ? N ILE A 34 B 4 5 N VAL A 33 ? N VAL A 33 O ILE A 85 ? O ILE A 85 B 5 6 O ILE A 86 ? O ILE A 86 N LEU A 24 ? N LEU A 24 B 6 7 O LYS A 21 ? O LYS A 21 N ILE A 14 ? N ILE A 14 B 7 8 N LYS A 15 ? N LYS A 15 O GLU A 66 ? O GLU A 66 C 1 2 N LYS B 46 ? N LYS B 46 O VAL B 57 ? O VAL B 57 C 2 3 N ILE B 67 ? N ILE B 67 O HIS B 70 ? O HIS B 70 C 3 4 O LEU B 77 ? O LEU B 77 N ILE B 34 ? N ILE B 34 C 4 5 N VAL B 33 ? N VAL B 33 O ILE B 85 ? O ILE B 85 C 5 6 O ILE B 86 ? O ILE B 86 N LEU B 24 ? N LEU B 24 C 6 7 O ALA B 23 ? O ALA B 23 N VAL B 12 ? N VAL B 12 C 7 8 N LYS B 15 ? N LYS B 15 O GLU B 66 ? O GLU B 66 D 1 2 N ILE C 4 ? N ILE C 3 O LEU D 98 ? O LEU D 97 D 2 3 O THR D 97 ? O THR D 96 N ASN C 99 ? N ASN C 98 D 3 4 N LEU C 98 ? N LEU C 97 O ILE D 4 ? O ILE D 3 E 1 2 N LYS C 44 ? N LYS C 43 O GLN C 59 ? O GLN C 58 E 2 3 N ILE C 67 ? N ILE C 66 O HIS C 70 ? O HIS C 69 E 3 4 O LEU C 77 ? O LEU C 76 N ILE C 34 ? N ILE C 33 E 4 5 N VAL C 33 ? N VAL C 32 O ILE C 85 ? O ILE C 84 E 5 6 O ILE C 86 ? O ILE C 85 N LEU C 24 ? N LEU C 23 E 6 7 O LYS C 21 ? O LYS C 20 N ILE C 14 ? N ILE C 13 E 7 8 N LYS C 15 ? N LYS C 14 O GLU C 66 ? O GLU C 65 F 1 2 N LYS D 46 ? N LYS D 45 O VAL D 57 ? O VAL D 56 F 2 3 N ARG D 58 ? N ARG D 57 O VAL D 78 ? O VAL D 77 F 3 4 O LEU D 77 ? O LEU D 76 N ILE D 34 ? N ILE D 33 F 4 5 N VAL D 33 ? N VAL D 32 O ILE D 85 ? O ILE D 84 F 5 6 O ILE D 86 ? O ILE D 85 N LEU D 24 ? N LEU D 23 F 6 7 O LYS D 21 ? O LYS D 20 N ILE D 14 ? N ILE D 13 F 7 8 N LYS D 15 ? N LYS D 14 O GLU D 66 ? O GLU D 65 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ROC 101 ? 29 'BINDING SITE FOR RESIDUE ROC A 101' AC2 Software A CL 102 ? 1 'BINDING SITE FOR RESIDUE CL A 102' AC3 Software A DMS 103 ? 5 'BINDING SITE FOR RESIDUE DMS A 103' AC4 Software A DMS 104 ? 8 'BINDING SITE FOR RESIDUE DMS A 104' AC5 Software B CL 102 ? 1 'BINDING SITE FOR RESIDUE CL B 102' AC6 Software B CL 103 ? 2 'BINDING SITE FOR RESIDUE CL B 103' AC7 Software C NA 100 ? 3 'BINDING SITE FOR RESIDUE NA C 100' AC8 Software C CL 101 ? 1 'BINDING SITE FOR RESIDUE CL C 101' AC9 Software C DMS 102 ? 7 'BINDING SITE FOR RESIDUE DMS C 102' BC1 Software C DMS 103 ? 6 'BINDING SITE FOR RESIDUE DMS C 103' BC2 Software D ROC 100 ? 26 'BINDING SITE FOR RESIDUE ROC D 100' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 29 ARG A 9 ? ARG A 9 . ? 1_555 ? 2 AC1 29 ASP A 26 ? ASP A 26 . ? 1_555 ? 3 AC1 29 GLY A 28 ? GLY A 28 . ? 1_555 ? 4 AC1 29 ALA A 29 ? ALA A 29 . ? 1_555 ? 5 AC1 29 ASP A 30 ? ASP A 30 . ? 1_555 ? 6 AC1 29 ASP A 31 ? ASP A 31 . ? 1_555 ? 7 AC1 29 VAL A 33 ? VAL A 33 . ? 1_555 ? 8 AC1 29 ILE A 48 ? ILE A 48 . ? 1_555 ? 9 AC1 29 GLY A 49 ? GLY A 49 . ? 1_555 ? 10 AC1 29 GLY A 50 ? GLY A 50 . ? 1_555 ? 11 AC1 29 ILE A 51 ? ILE A 51 . ? 1_555 ? 12 AC1 29 THR A 81 ? THR A 81 . ? 1_555 ? 13 AC1 29 PRO A 82 ? PRO A 82 . ? 1_555 ? 14 AC1 29 ILE A 85 ? ILE A 85 . ? 1_555 ? 15 AC1 29 HOH T . ? HOH A 116 . ? 1_555 ? 16 AC1 29 HOH T . ? HOH A 324 . ? 1_555 ? 17 AC1 29 ARG B 9 ? ARG B 9 . ? 1_555 ? 18 AC1 29 ASP B 26 ? ASP B 26 . ? 1_555 ? 19 AC1 29 GLY B 28 ? GLY B 28 . ? 1_555 ? 20 AC1 29 ALA B 29 ? ALA B 29 . ? 1_555 ? 21 AC1 29 ASP B 30 ? ASP B 30 . ? 1_555 ? 22 AC1 29 ASP B 31 ? ASP B 31 . ? 1_555 ? 23 AC1 29 GLY B 49 ? GLY B 49 . ? 1_555 ? 24 AC1 29 GLY B 50 ? GLY B 50 . ? 1_555 ? 25 AC1 29 ILE B 51 ? ILE B 51 . ? 1_555 ? 26 AC1 29 PRO B 82 ? PRO B 82 . ? 1_555 ? 27 AC1 29 ILE B 85 ? ILE B 85 . ? 1_555 ? 28 AC1 29 HOH U . ? HOH B 119 . ? 1_555 ? 29 AC1 29 TRP C 7 ? TRP C 6 . ? 1_555 ? 30 AC2 1 SER B 38 ? SER B 38 . ? 1_455 ? 31 AC3 5 LYS A 15 ? LYS A 15 . ? 1_555 ? 32 AC3 5 GLY A 18 ? GLY A 18 . ? 1_555 ? 33 AC3 5 ILE A 64 ? ILE A 64 . ? 1_555 ? 34 AC3 5 DMS H . ? DMS A 104 . ? 1_555 ? 35 AC3 5 GLY B 18 ? GLY B 18 . ? 1_455 ? 36 AC4 8 GLY A 18 ? GLY A 18 . ? 1_555 ? 37 AC4 8 DMS G . ? DMS A 103 . ? 1_555 ? 38 AC4 8 HOH T . ? HOH A 115 . ? 1_555 ? 39 AC4 8 LYS B 15 ? LYS B 15 . ? 1_455 ? 40 AC4 8 ILE B 16 ? ILE B 16 . ? 1_455 ? 41 AC4 8 GLY B 17 ? GLY B 17 . ? 1_455 ? 42 AC4 8 GLY B 18 ? GLY B 18 . ? 1_455 ? 43 AC4 8 ILE B 64 ? ILE B 64 . ? 1_455 ? 44 AC5 1 LYS B 8 ? LYS B 8 . ? 1_555 ? 45 AC6 2 LYS A 15 ? LYS A 15 . ? 1_655 ? 46 AC6 2 ILE B 64 ? ILE B 64 . ? 1_555 ? 47 AC7 3 THR C 13 ? THR C 12 . ? 1_555 ? 48 AC7 3 GLU C 66 ? GLU C 65 . ? 1_555 ? 49 AC7 3 GLY C 69 ? GLY C 68 . ? 1_555 ? 50 AC8 1 GLY D 41 ? GLY D 40 . ? 1_455 ? 51 AC9 7 GLY C 18 ? GLY C 17 . ? 1_555 ? 52 AC9 7 DMS R . ? DMS C 103 . ? 1_555 ? 53 AC9 7 LYS D 15 ? LYS D 14 . ? 1_455 ? 54 AC9 7 ILE D 16 ? ILE D 15 . ? 1_455 ? 55 AC9 7 GLY D 17 ? GLY D 16 . ? 1_455 ? 56 AC9 7 GLY D 18 ? GLY D 17 . ? 1_455 ? 57 AC9 7 ILE D 64 ? ILE D 63 . ? 1_455 ? 58 BC1 6 LYS C 15 ? LYS C 14 . ? 1_555 ? 59 BC1 6 ILE C 16 ? ILE C 15 . ? 1_555 ? 60 BC1 6 GLY C 17 ? GLY C 16 . ? 1_555 ? 61 BC1 6 GLY C 18 ? GLY C 17 . ? 1_555 ? 62 BC1 6 DMS Q . ? DMS C 102 . ? 1_555 ? 63 BC1 6 GLY D 18 ? GLY D 17 . ? 1_455 ? 64 BC2 26 ARG C 9 ? ARG C 8 . ? 1_555 ? 65 BC2 26 LEU C 24 ? LEU C 23 . ? 1_555 ? 66 BC2 26 ASP C 26 ? ASP C 25 . ? 1_555 ? 67 BC2 26 GLY C 28 ? GLY C 27 . ? 1_555 ? 68 BC2 26 ALA C 29 ? ALA C 28 . ? 1_555 ? 69 BC2 26 ASP C 30 ? ASP C 29 . ? 1_555 ? 70 BC2 26 ASP C 31 ? ASP C 30 . ? 1_555 ? 71 BC2 26 GLY C 49 ? GLY C 48 . ? 1_555 ? 72 BC2 26 GLY C 50 ? GLY C 49 . ? 1_555 ? 73 BC2 26 ILE C 51 ? ILE C 50 . ? 1_555 ? 74 BC2 26 PRO C 82 ? PRO C 81 . ? 1_555 ? 75 BC2 26 ILE C 85 ? ILE C 84 . ? 1_555 ? 76 BC2 26 HOH V . ? HOH C 107 . ? 1_555 ? 77 BC2 26 ARG D 9 ? ARG D 8 . ? 1_555 ? 78 BC2 26 ASP D 26 ? ASP D 25 . ? 1_555 ? 79 BC2 26 GLY D 28 ? GLY D 27 . ? 1_555 ? 80 BC2 26 ALA D 29 ? ALA D 28 . ? 1_555 ? 81 BC2 26 ASP D 30 ? ASP D 29 . ? 1_555 ? 82 BC2 26 ASP D 31 ? ASP D 30 . ? 1_555 ? 83 BC2 26 GLY D 49 ? GLY D 48 . ? 1_555 ? 84 BC2 26 GLY D 50 ? GLY D 49 . ? 1_555 ? 85 BC2 26 ILE D 51 ? ILE D 50 . ? 1_555 ? 86 BC2 26 THR D 81 ? THR D 80 . ? 1_555 ? 87 BC2 26 ILE D 85 ? ILE D 84 . ? 1_555 ? 88 BC2 26 HOH W . ? HOH D 102 . ? 1_555 ? 89 BC2 26 HOH W . ? HOH D 116 . ? 1_555 ? # _database_PDB_matrix.entry_id 3NDT _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _atom_sites.entry_id 3NDT _atom_sites.fract_transf_matrix[1][1] 0.019495 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002851 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015927 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017080 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL N NA O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ARF 1 1 1 ARF ARF A . n A 1 2 PRO 2 2 2 PRO PRO A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 ILE 4 4 4 ILE ILE A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 TRP 7 7 7 TRP TRP A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 ARG 9 9 9 ARG ARG A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 ILE 14 14 14 ILE ILE A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 ILE 16 16 16 ILE ILE A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 GLN 19 19 19 GLN GLN A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 ASP 26 26 26 ASP ASP A . n A 1 27 THR 27 27 27 THR THR A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 ASP 31 31 31 ASP ASP A . n A 1 32 THR 32 32 32 THR THR A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 GLU 36 36 36 GLU GLU A . n A 1 37 MET 37 37 37 MET MET A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 PRO 40 40 40 PRO PRO A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 ARG 42 42 42 ARG ARG A . n A 1 43 TRP 43 43 43 TRP TRP A . n A 1 44 LYS 44 44 44 LYS LYS A . n A 1 45 PRO 45 45 45 PRO PRO A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 MET 47 47 47 MET MET A . n A 1 48 ILE 48 48 48 ILE ILE A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 GLY 50 50 50 GLY GLY A . n A 1 51 ILE 51 51 51 ILE ILE A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 PHE 54 54 54 PHE PHE A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 LYS 56 56 56 LYS LYS A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 ARG 58 58 58 ARG ARG A . n A 1 59 GLN 59 59 59 GLN GLN A . n A 1 60 TYR 60 60 60 TYR TYR A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 GLN 62 62 62 GLN GLN A . n A 1 63 ILE 63 63 63 ILE ILE A . n A 1 64 ILE 64 64 64 ILE ILE A . n A 1 65 ILE 65 65 65 ILE ILE A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 ILE 67 67 67 ILE ILE A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 HIS 70 70 70 HIS HIS A . n A 1 71 LYS 71 71 71 LYS LYS A . n A 1 72 ALA 72 72 72 ALA ALA A . n A 1 73 ILE 73 73 73 ILE ILE A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 THR 75 75 75 THR THR A . n A 1 76 VAL 76 76 76 VAL VAL A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 VAL 78 78 78 VAL VAL A . n A 1 79 GLY 79 79 79 GLY GLY A . n A 1 80 PRO 80 80 80 PRO PRO A . n A 1 81 THR 81 81 81 THR THR A . n A 1 82 PRO 82 82 82 PRO PRO A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 ASN 84 84 84 ASN ASN A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 ILE 86 86 86 ILE ILE A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 ARG 88 88 88 ARG ARG A . n A 1 89 ASN 89 89 89 ASN ASN A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 THR 92 92 92 THR THR A . n A 1 93 GLN 93 93 93 GLN GLN A . n A 1 94 ILE 94 94 94 ILE ILE A . n A 1 95 GLY 95 95 95 GLY GLY A . n A 1 96 ALA 96 96 96 ALA ALA A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 LEU 98 98 98 LEU LEU A . n A 1 99 ASN 99 99 99 ASN ASN A . n A 1 100 PHE 100 100 100 PHE PHE A . n B 1 1 ARF 1 1 1 ARF ARF B . n B 1 2 PRO 2 2 2 PRO PRO B . n B 1 3 GLN 3 3 3 GLN GLN B . n B 1 4 ILE 4 4 4 ILE ILE B . n B 1 5 THR 5 5 5 THR THR B . n B 1 6 LEU 6 6 6 LEU LEU B . n B 1 7 TRP 7 7 7 TRP TRP B . n B 1 8 LYS 8 8 8 LYS LYS B . n B 1 9 ARG 9 9 9 ARG ARG B . n B 1 10 PRO 10 10 10 PRO PRO B . n B 1 11 LEU 11 11 11 LEU LEU B . n B 1 12 VAL 12 12 12 VAL VAL B . n B 1 13 THR 13 13 13 THR THR B . n B 1 14 ILE 14 14 14 ILE ILE B . n B 1 15 LYS 15 15 15 LYS LYS B . n B 1 16 ILE 16 16 16 ILE ILE B . n B 1 17 GLY 17 17 17 GLY GLY B . n B 1 18 GLY 18 18 18 GLY GLY B . n B 1 19 GLN 19 19 19 GLN GLN B . n B 1 20 LEU 20 20 20 LEU LEU B . n B 1 21 LYS 21 21 21 LYS LYS B . n B 1 22 GLU 22 22 22 GLU GLU B . n B 1 23 ALA 23 23 23 ALA ALA B . n B 1 24 LEU 24 24 24 LEU LEU B . n B 1 25 LEU 25 25 25 LEU LEU B . n B 1 26 ASP 26 26 26 ASP ASP B . n B 1 27 THR 27 27 27 THR THR B . n B 1 28 GLY 28 28 28 GLY GLY B . n B 1 29 ALA 29 29 29 ALA ALA B . n B 1 30 ASP 30 30 30 ASP ASP B . n B 1 31 ASP 31 31 31 ASP ASP B . n B 1 32 THR 32 32 32 THR THR B . n B 1 33 VAL 33 33 33 VAL VAL B . n B 1 34 ILE 34 34 34 ILE ILE B . n B 1 35 GLU 35 35 35 GLU GLU B . n B 1 36 GLU 36 36 36 GLU GLU B . n B 1 37 MET 37 37 37 MET MET B . n B 1 38 SER 38 38 38 SER SER B . n B 1 39 LEU 39 39 39 LEU LEU B . n B 1 40 PRO 40 40 40 PRO PRO B . n B 1 41 GLY 41 41 41 GLY GLY B . n B 1 42 ARG 42 42 42 ARG ARG B . n B 1 43 TRP 43 43 43 TRP TRP B . n B 1 44 LYS 44 44 44 LYS LYS B . n B 1 45 PRO 45 45 45 PRO PRO B . n B 1 46 LYS 46 46 46 LYS LYS B . n B 1 47 MET 47 47 47 MET MET B . n B 1 48 ILE 48 48 48 ILE ILE B . n B 1 49 GLY 49 49 49 GLY GLY B . n B 1 50 GLY 50 50 50 GLY GLY B . n B 1 51 ILE 51 51 51 ILE ILE B . n B 1 52 GLY 52 52 52 GLY GLY B . n B 1 53 GLY 53 53 53 GLY GLY B . n B 1 54 PHE 54 54 54 PHE PHE B . n B 1 55 ILE 55 55 55 ILE ILE B . n B 1 56 LYS 56 56 56 LYS LYS B . n B 1 57 VAL 57 57 57 VAL VAL B . n B 1 58 ARG 58 58 58 ARG ARG B . n B 1 59 GLN 59 59 59 GLN GLN B . n B 1 60 TYR 60 60 60 TYR TYR B . n B 1 61 ASP 61 61 61 ASP ASP B . n B 1 62 GLN 62 62 62 GLN GLN B . n B 1 63 ILE 63 63 63 ILE ILE B . n B 1 64 ILE 64 64 64 ILE ILE B . n B 1 65 ILE 65 65 65 ILE ILE B . n B 1 66 GLU 66 66 66 GLU GLU B . n B 1 67 ILE 67 67 67 ILE ILE B . n B 1 68 ALA 68 68 68 ALA ALA B . n B 1 69 GLY 69 69 69 GLY GLY B . n B 1 70 HIS 70 70 70 HIS HIS B . n B 1 71 LYS 71 71 71 LYS LYS B . n B 1 72 ALA 72 72 72 ALA ALA B . n B 1 73 ILE 73 73 73 ILE ILE B . n B 1 74 GLY 74 74 74 GLY GLY B . n B 1 75 THR 75 75 75 THR THR B . n B 1 76 VAL 76 76 76 VAL VAL B . n B 1 77 LEU 77 77 77 LEU LEU B . n B 1 78 VAL 78 78 78 VAL VAL B . n B 1 79 GLY 79 79 79 GLY GLY B . n B 1 80 PRO 80 80 80 PRO PRO B . n B 1 81 THR 81 81 81 THR THR B . n B 1 82 PRO 82 82 82 PRO PRO B . n B 1 83 VAL 83 83 83 VAL VAL B . n B 1 84 ASN 84 84 84 ASN ASN B . n B 1 85 ILE 85 85 85 ILE ILE B . n B 1 86 ILE 86 86 86 ILE ILE B . n B 1 87 GLY 87 87 87 GLY GLY B . n B 1 88 ARG 88 88 88 ARG ARG B . n B 1 89 ASN 89 89 89 ASN ASN B . n B 1 90 LEU 90 90 90 LEU LEU B . n B 1 91 LEU 91 91 91 LEU LEU B . n B 1 92 THR 92 92 92 THR THR B . n B 1 93 GLN 93 93 93 GLN GLN B . n B 1 94 ILE 94 94 94 ILE ILE B . n B 1 95 GLY 95 95 95 GLY GLY B . n B 1 96 ALA 96 96 96 ALA ALA B . n B 1 97 THR 97 97 97 THR THR B . n B 1 98 LEU 98 98 98 LEU LEU B . n B 1 99 ASN 99 99 99 ASN ASN B . n B 1 100 PHE 100 100 100 PHE PHE B . n C 1 1 ARF 1 0 ? ? ? C . n C 1 2 PRO 2 1 1 PRO PRO C . n C 1 3 GLN 3 2 2 GLN GLN C . n C 1 4 ILE 4 3 3 ILE ILE C . n C 1 5 THR 5 4 4 THR THR C . n C 1 6 LEU 6 5 5 LEU LEU C . n C 1 7 TRP 7 6 6 TRP TRP C . n C 1 8 LYS 8 7 7 LYS LYS C . n C 1 9 ARG 9 8 8 ARG ARG C . n C 1 10 PRO 10 9 9 PRO PRO C . n C 1 11 LEU 11 10 10 LEU LEU C . n C 1 12 VAL 12 11 11 VAL VAL C . n C 1 13 THR 13 12 12 THR THR C . n C 1 14 ILE 14 13 13 ILE ILE C . n C 1 15 LYS 15 14 14 LYS LYS C . n C 1 16 ILE 16 15 15 ILE ILE C . n C 1 17 GLY 17 16 16 GLY GLY C . n C 1 18 GLY 18 17 17 GLY GLY C . n C 1 19 GLN 19 18 18 GLN GLN C . n C 1 20 LEU 20 19 19 LEU LEU C . n C 1 21 LYS 21 20 20 LYS LYS C . n C 1 22 GLU 22 21 21 GLU GLU C . n C 1 23 ALA 23 22 22 ALA ALA C . n C 1 24 LEU 24 23 23 LEU LEU C . n C 1 25 LEU 25 24 24 LEU LEU C . n C 1 26 ASP 26 25 25 ASP ASP C . n C 1 27 THR 27 26 26 THR THR C . n C 1 28 GLY 28 27 27 GLY GLY C . n C 1 29 ALA 29 28 28 ALA ALA C . n C 1 30 ASP 30 29 29 ASP ASP C . n C 1 31 ASP 31 30 30 ASP ASP C . n C 1 32 THR 32 31 31 THR THR C . n C 1 33 VAL 33 32 32 VAL VAL C . n C 1 34 ILE 34 33 33 ILE ILE C . n C 1 35 GLU 35 34 34 GLU GLU C . n C 1 36 GLU 36 35 35 GLU GLU C . n C 1 37 MET 37 36 36 MET MET C . n C 1 38 SER 38 37 37 SER SER C . n C 1 39 LEU 39 38 38 LEU LEU C . n C 1 40 PRO 40 39 39 PRO PRO C . n C 1 41 GLY 41 40 40 GLY GLY C . n C 1 42 ARG 42 41 41 ARG ARG C . n C 1 43 TRP 43 42 42 TRP TRP C . n C 1 44 LYS 44 43 43 LYS LYS C . n C 1 45 PRO 45 44 44 PRO PRO C . n C 1 46 LYS 46 45 45 LYS LYS C . n C 1 47 MET 47 46 46 MET MET C . n C 1 48 ILE 48 47 47 ILE ILE C . n C 1 49 GLY 49 48 48 GLY GLY C . n C 1 50 GLY 50 49 49 GLY GLY C . n C 1 51 ILE 51 50 50 ILE ILE C . n C 1 52 GLY 52 51 51 GLY GLY C . n C 1 53 GLY 53 52 52 GLY GLY C . n C 1 54 PHE 54 53 53 PHE PHE C . n C 1 55 ILE 55 54 54 ILE ILE C . n C 1 56 LYS 56 55 55 LYS LYS C . n C 1 57 VAL 57 56 56 VAL VAL C . n C 1 58 ARG 58 57 57 ARG ARG C . n C 1 59 GLN 59 58 58 GLN GLN C . n C 1 60 TYR 60 59 59 TYR TYR C . n C 1 61 ASP 61 60 60 ASP ASP C . n C 1 62 GLN 62 61 61 GLN GLN C . n C 1 63 ILE 63 62 62 ILE ILE C . n C 1 64 ILE 64 63 63 ILE ILE C . n C 1 65 ILE 65 64 64 ILE ILE C . n C 1 66 GLU 66 65 65 GLU GLU C . n C 1 67 ILE 67 66 66 ILE ILE C . n C 1 68 ALA 68 67 67 ALA ALA C . n C 1 69 GLY 69 68 68 GLY GLY C . n C 1 70 HIS 70 69 69 HIS HIS C . n C 1 71 LYS 71 70 70 LYS LYS C . n C 1 72 ALA 72 71 71 ALA ALA C . n C 1 73 ILE 73 72 72 ILE ILE C . n C 1 74 GLY 74 73 73 GLY GLY C . n C 1 75 THR 75 74 74 THR THR C . n C 1 76 VAL 76 75 75 VAL VAL C . n C 1 77 LEU 77 76 76 LEU LEU C . n C 1 78 VAL 78 77 77 VAL VAL C . n C 1 79 GLY 79 78 78 GLY GLY C . n C 1 80 PRO 80 79 79 PRO PRO C . n C 1 81 THR 81 80 80 THR THR C . n C 1 82 PRO 82 81 81 PRO PRO C . n C 1 83 VAL 83 82 82 VAL VAL C . n C 1 84 ASN 84 83 83 ASN ASN C . n C 1 85 ILE 85 84 84 ILE ILE C . n C 1 86 ILE 86 85 85 ILE ILE C . n C 1 87 GLY 87 86 86 GLY GLY C . n C 1 88 ARG 88 87 87 ARG ARG C . n C 1 89 ASN 89 88 88 ASN ASN C . n C 1 90 LEU 90 89 89 LEU LEU C . n C 1 91 LEU 91 90 90 LEU LEU C . n C 1 92 THR 92 91 91 THR THR C . n C 1 93 GLN 93 92 92 GLN GLN C . n C 1 94 ILE 94 93 93 ILE ILE C . n C 1 95 GLY 95 94 94 GLY GLY C . n C 1 96 ALA 96 95 95 ALA ALA C . n C 1 97 THR 97 96 96 THR THR C . n C 1 98 LEU 98 97 97 LEU LEU C . n C 1 99 ASN 99 98 98 ASN ASN C . n C 1 100 PHE 100 99 99 PHE PHE C . n D 1 1 ARF 1 0 ? ? ? D . n D 1 2 PRO 2 1 1 PRO PRO D . n D 1 3 GLN 3 2 2 GLN GLN D . n D 1 4 ILE 4 3 3 ILE ILE D . n D 1 5 THR 5 4 4 THR THR D . n D 1 6 LEU 6 5 5 LEU LEU D . n D 1 7 TRP 7 6 6 TRP TRP D . n D 1 8 LYS 8 7 7 LYS LYS D . n D 1 9 ARG 9 8 8 ARG ARG D . n D 1 10 PRO 10 9 9 PRO PRO D . n D 1 11 LEU 11 10 10 LEU LEU D . n D 1 12 VAL 12 11 11 VAL VAL D . n D 1 13 THR 13 12 12 THR THR D . n D 1 14 ILE 14 13 13 ILE ILE D . n D 1 15 LYS 15 14 14 LYS LYS D . n D 1 16 ILE 16 15 15 ILE ILE D . n D 1 17 GLY 17 16 16 GLY GLY D . n D 1 18 GLY 18 17 17 GLY GLY D . n D 1 19 GLN 19 18 18 GLN GLN D . n D 1 20 LEU 20 19 19 LEU LEU D . n D 1 21 LYS 21 20 20 LYS LYS D . n D 1 22 GLU 22 21 21 GLU GLU D . n D 1 23 ALA 23 22 22 ALA ALA D . n D 1 24 LEU 24 23 23 LEU LEU D . n D 1 25 LEU 25 24 24 LEU LEU D . n D 1 26 ASP 26 25 25 ASP ASP D . n D 1 27 THR 27 26 26 THR THR D . n D 1 28 GLY 28 27 27 GLY GLY D . n D 1 29 ALA 29 28 28 ALA ALA D . n D 1 30 ASP 30 29 29 ASP ASP D . n D 1 31 ASP 31 30 30 ASP ASP D . n D 1 32 THR 32 31 31 THR THR D . n D 1 33 VAL 33 32 32 VAL VAL D . n D 1 34 ILE 34 33 33 ILE ILE D . n D 1 35 GLU 35 34 34 GLU GLU D . n D 1 36 GLU 36 35 35 GLU GLU D . n D 1 37 MET 37 36 36 MET MET D . n D 1 38 SER 38 37 37 SER SER D . n D 1 39 LEU 39 38 38 LEU LEU D . n D 1 40 PRO 40 39 39 PRO PRO D . n D 1 41 GLY 41 40 40 GLY GLY D . n D 1 42 ARG 42 41 41 ARG ARG D . n D 1 43 TRP 43 42 42 TRP TRP D . n D 1 44 LYS 44 43 43 LYS LYS D . n D 1 45 PRO 45 44 44 PRO PRO D . n D 1 46 LYS 46 45 45 LYS LYS D . n D 1 47 MET 47 46 46 MET MET D . n D 1 48 ILE 48 47 47 ILE ILE D . n D 1 49 GLY 49 48 48 GLY GLY D . n D 1 50 GLY 50 49 49 GLY GLY D . n D 1 51 ILE 51 50 50 ILE ILE D . n D 1 52 GLY 52 51 51 GLY GLY D . n D 1 53 GLY 53 52 52 GLY GLY D . n D 1 54 PHE 54 53 53 PHE PHE D . n D 1 55 ILE 55 54 54 ILE ILE D . n D 1 56 LYS 56 55 55 LYS LYS D . n D 1 57 VAL 57 56 56 VAL VAL D . n D 1 58 ARG 58 57 57 ARG ARG D . n D 1 59 GLN 59 58 58 GLN GLN D . n D 1 60 TYR 60 59 59 TYR TYR D . n D 1 61 ASP 61 60 60 ASP ASP D . n D 1 62 GLN 62 61 61 GLN GLN D . n D 1 63 ILE 63 62 62 ILE ILE D . n D 1 64 ILE 64 63 63 ILE ILE D . n D 1 65 ILE 65 64 64 ILE ILE D . n D 1 66 GLU 66 65 65 GLU GLU D . n D 1 67 ILE 67 66 66 ILE ILE D . n D 1 68 ALA 68 67 67 ALA ALA D . n D 1 69 GLY 69 68 68 GLY GLY D . n D 1 70 HIS 70 69 69 HIS HIS D . n D 1 71 LYS 71 70 70 LYS LYS D . n D 1 72 ALA 72 71 71 ALA ALA D . n D 1 73 ILE 73 72 72 ILE ILE D . n D 1 74 GLY 74 73 73 GLY GLY D . n D 1 75 THR 75 74 74 THR THR D . n D 1 76 VAL 76 75 75 VAL VAL D . n D 1 77 LEU 77 76 76 LEU LEU D . n D 1 78 VAL 78 77 77 VAL VAL D . n D 1 79 GLY 79 78 78 GLY GLY D . n D 1 80 PRO 80 79 79 PRO PRO D . n D 1 81 THR 81 80 80 THR THR D . n D 1 82 PRO 82 81 81 PRO PRO D . n D 1 83 VAL 83 82 82 VAL VAL D . n D 1 84 ASN 84 83 83 ASN ASN D . n D 1 85 ILE 85 84 84 ILE ILE D . n D 1 86 ILE 86 85 85 ILE ILE D . n D 1 87 GLY 87 86 86 GLY GLY D . n D 1 88 ARG 88 87 87 ARG ARG D . n D 1 89 ASN 89 88 88 ASN ASN D . n D 1 90 LEU 90 89 89 LEU LEU D . n D 1 91 LEU 91 90 90 LEU LEU D . n D 1 92 THR 92 91 91 THR THR D . n D 1 93 GLN 93 92 92 GLN GLN D . n D 1 94 ILE 94 93 93 ILE ILE D . n D 1 95 GLY 95 94 94 GLY GLY D . n D 1 96 ALA 96 95 95 ALA ALA D . n D 1 97 THR 97 96 96 THR THR D . n D 1 98 LEU 98 97 97 LEU LEU D . n D 1 99 ASN 99 98 98 ASN ASN D . n D 1 100 PHE 100 99 99 PHE PHE D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ROC 1 101 2 ROC ROC A . F 3 CL 1 102 9 CL CL A . G 4 DMS 1 103 10 DMS DMS A . H 4 DMS 1 104 12 DMS DMS A . I 5 NA 1 101 1 NA NA B . J 3 CL 1 102 4 CL CL B . K 3 CL 1 103 5 CL CL B . L 3 CL 1 104 6 CL CL B . M 3 CL 1 105 7 CL CL B . N 3 CL 1 106 8 CL CL B . O 5 NA 1 100 2 NA NA C . P 3 CL 1 101 3 CL CL C . Q 4 DMS 1 102 11 DMS DMS C . R 4 DMS 1 103 13 DMS DMS C . S 2 ROC 1 100 1 ROC ROC D . T 6 HOH 1 106 3 HOH HOH A . T 6 HOH 2 107 6 HOH HOH A . T 6 HOH 3 108 15 HOH HOH A . T 6 HOH 4 109 17 HOH HOH A . T 6 HOH 5 110 18 HOH HOH A . T 6 HOH 6 111 22 HOH HOH A . T 6 HOH 7 112 24 HOH HOH A . T 6 HOH 8 113 25 HOH HOH A . T 6 HOH 9 114 30 HOH HOH A . T 6 HOH 10 115 40 HOH HOH A . T 6 HOH 11 116 43 HOH HOH A . T 6 HOH 12 117 46 HOH HOH A . T 6 HOH 13 118 50 HOH HOH A . T 6 HOH 14 119 61 HOH HOH A . T 6 HOH 15 120 62 HOH HOH A . T 6 HOH 16 121 64 HOH HOH A . T 6 HOH 17 122 69 HOH HOH A . T 6 HOH 18 123 77 HOH HOH A . T 6 HOH 19 124 79 HOH HOH A . T 6 HOH 20 125 80 HOH HOH A . T 6 HOH 21 126 93 HOH HOH A . T 6 HOH 22 154 154 HOH HOH A . T 6 HOH 23 164 164 HOH HOH A . T 6 HOH 24 206 206 HOH HOH A . T 6 HOH 25 208 208 HOH HOH A . T 6 HOH 26 257 257 HOH HOH A . T 6 HOH 27 285 285 HOH HOH A . T 6 HOH 28 294 294 HOH HOH A . T 6 HOH 29 301 301 HOH HOH A . T 6 HOH 30 308 308 HOH HOH A . T 6 HOH 31 311 311 HOH HOH A . T 6 HOH 32 313 313 HOH HOH A . T 6 HOH 33 319 319 HOH HOH A . T 6 HOH 34 324 324 HOH HOH A . T 6 HOH 35 325 325 HOH HOH A . U 6 HOH 1 107 7 HOH HOH B . U 6 HOH 2 108 10 HOH HOH B . U 6 HOH 3 109 21 HOH HOH B . U 6 HOH 4 110 26 HOH HOH B . U 6 HOH 5 111 31 HOH HOH B . U 6 HOH 6 112 42 HOH HOH B . U 6 HOH 7 113 44 HOH HOH B . U 6 HOH 8 114 66 HOH HOH B . U 6 HOH 9 115 70 HOH HOH B . U 6 HOH 10 116 89 HOH HOH B . U 6 HOH 11 117 117 HOH HOH B . U 6 HOH 12 118 92 HOH HOH B . U 6 HOH 13 119 2 HOH HOH B . U 6 HOH 14 159 159 HOH HOH B . U 6 HOH 15 166 166 HOH HOH B . U 6 HOH 16 198 198 HOH HOH B . U 6 HOH 17 209 209 HOH HOH B . U 6 HOH 18 264 264 HOH HOH B . U 6 HOH 19 267 267 HOH HOH B . U 6 HOH 20 268 268 HOH HOH B . U 6 HOH 21 275 275 HOH HOH B . U 6 HOH 22 276 276 HOH HOH B . U 6 HOH 23 278 278 HOH HOH B . U 6 HOH 24 280 280 HOH HOH B . U 6 HOH 25 295 295 HOH HOH B . U 6 HOH 26 297 297 HOH HOH B . U 6 HOH 27 299 299 HOH HOH B . U 6 HOH 28 300 300 HOH HOH B . U 6 HOH 29 310 310 HOH HOH B . U 6 HOH 30 312 312 HOH HOH B . U 6 HOH 31 317 317 HOH HOH B . U 6 HOH 32 323 323 HOH HOH B . U 6 HOH 33 326 326 HOH HOH B . V 6 HOH 1 104 8 HOH HOH C . V 6 HOH 2 105 13 HOH HOH C . V 6 HOH 3 106 106 HOH HOH C . V 6 HOH 4 107 14 HOH HOH C . V 6 HOH 5 108 19 HOH HOH C . V 6 HOH 6 109 23 HOH HOH C . V 6 HOH 7 110 27 HOH HOH C . V 6 HOH 8 111 29 HOH HOH C . V 6 HOH 9 112 32 HOH HOH C . V 6 HOH 10 113 36 HOH HOH C . V 6 HOH 11 114 39 HOH HOH C . V 6 HOH 12 115 45 HOH HOH C . V 6 HOH 13 116 48 HOH HOH C . V 6 HOH 14 117 49 HOH HOH C . V 6 HOH 15 118 74 HOH HOH C . V 6 HOH 16 119 75 HOH HOH C . V 6 HOH 17 120 85 HOH HOH C . V 6 HOH 18 121 86 HOH HOH C . V 6 HOH 19 122 90 HOH HOH C . V 6 HOH 20 123 100 HOH HOH C . V 6 HOH 21 124 28 HOH HOH C . V 6 HOH 22 130 130 HOH HOH C . V 6 HOH 23 162 162 HOH HOH C . V 6 HOH 24 210 210 HOH HOH C . V 6 HOH 25 265 265 HOH HOH C . V 6 HOH 26 279 279 HOH HOH C . V 6 HOH 27 281 281 HOH HOH C . V 6 HOH 28 284 284 HOH HOH C . V 6 HOH 29 290 290 HOH HOH C . V 6 HOH 30 293 293 HOH HOH C . V 6 HOH 31 296 296 HOH HOH C . V 6 HOH 32 298 298 HOH HOH C . V 6 HOH 33 315 315 HOH HOH C . V 6 HOH 34 318 318 HOH HOH C . V 6 HOH 35 321 321 HOH HOH C . V 6 HOH 36 327 327 HOH HOH C . W 6 HOH 1 101 101 HOH HOH D . W 6 HOH 2 102 1 HOH HOH D . W 6 HOH 3 103 5 HOH HOH D . W 6 HOH 4 104 9 HOH HOH D . W 6 HOH 5 105 11 HOH HOH D . W 6 HOH 6 106 12 HOH HOH D . W 6 HOH 7 107 16 HOH HOH D . W 6 HOH 8 108 20 HOH HOH D . W 6 HOH 9 110 33 HOH HOH D . W 6 HOH 10 111 34 HOH HOH D . W 6 HOH 11 112 35 HOH HOH D . W 6 HOH 12 113 113 HOH HOH D . W 6 HOH 13 114 37 HOH HOH D . W 6 HOH 14 115 38 HOH HOH D . W 6 HOH 15 116 41 HOH HOH D . W 6 HOH 16 117 55 HOH HOH D . W 6 HOH 17 118 65 HOH HOH D . W 6 HOH 18 119 67 HOH HOH D . W 6 HOH 19 120 71 HOH HOH D . W 6 HOH 20 121 76 HOH HOH D . W 6 HOH 21 122 98 HOH HOH D . W 6 HOH 22 158 158 HOH HOH D . W 6 HOH 23 207 207 HOH HOH D . W 6 HOH 24 216 216 HOH HOH D . W 6 HOH 25 266 266 HOH HOH D . W 6 HOH 26 283 283 HOH HOH D . W 6 HOH 27 302 302 HOH HOH D . W 6 HOH 28 303 303 HOH HOH D . W 6 HOH 29 306 306 HOH HOH D . W 6 HOH 30 307 307 HOH HOH D . W 6 HOH 31 309 309 HOH HOH D . # _pdbx_molecule_features.prd_id PRD_000454 _pdbx_molecule_features.name Saquinavir _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # loop_ _pdbx_molecule.instance_id _pdbx_molecule.prd_id _pdbx_molecule.asym_id 1 PRD_000454 S 2 PRD_000454 E # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,E,F,G,H,I,J,K,L,M,N,T,U 2 1 C,D,O,P,Q,R,S,V,W # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6250 ? 1 MORE -56 ? 1 'SSA (A^2)' 9480 ? 2 'ABSA (A^2)' 5820 ? 2 MORE -50 ? 2 'SSA (A^2)' 9740 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-07-20 2 'Structure model' 1 1 2011-12-07 3 'Structure model' 1 2 2012-12-12 4 'Structure model' 1 3 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' Other 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' entity 6 4 'Structure model' pdbx_entity_nonpoly 7 4 'Structure model' pdbx_initial_refinement_model 8 4 'Structure model' struct_conn 9 4 'Structure model' struct_ref_seq_dif 10 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_chem_comp.name' 2 4 'Structure model' '_chem_comp.pdbx_synonyms' 3 4 'Structure model' '_database_2.pdbx_DOI' 4 4 'Structure model' '_database_2.pdbx_database_accession' 5 4 'Structure model' '_entity.pdbx_description' 6 4 'Structure model' '_pdbx_entity_nonpoly.name' 7 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 8 4 'Structure model' '_struct_ref_seq_dif.details' 9 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 10 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 11 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 SHELX 'model building' . ? 2 SHELXL-97 refinement . ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 SHELX phasing . ? 6 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE B ARG 9 ? B CZ B ARG 9 ? B NH1 B ARG 9 ? B 117.08 120.30 -3.22 0.50 N 2 1 CA B ILE 51 ? A C B ILE 51 ? A N B GLY 52 ? A 131.29 116.20 15.09 2.00 Y 3 1 NE D ARG 41 ? ? CZ D ARG 41 ? ? NH1 D ARG 41 ? ? 114.92 120.30 -5.38 0.50 N 4 1 NE D ARG 57 ? ? CZ D ARG 57 ? ? NH1 D ARG 57 ? ? 116.80 120.30 -3.50 0.50 N 5 1 NE D ARG 87 ? ? CZ D ARG 87 ? ? NH1 D ARG 87 ? ? 123.45 120.30 3.15 0.50 N 6 1 NE D ARG 87 ? ? CZ D ARG 87 ? ? NH2 D ARG 87 ? ? 116.46 120.30 -3.84 0.50 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ILE _pdbx_validate_torsion.auth_asym_id B _pdbx_validate_torsion.auth_seq_id 51 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id A _pdbx_validate_torsion.phi -49.57 _pdbx_validate_torsion.psi -77.58 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 C ARF 0 ? C ARF 1 2 1 Y 1 D ARF 0 ? D ARF 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARF N N N N 14 ARF C C N N 15 ARF O O N N 16 ARF HN1 H N N 17 ARF HN2 H N N 18 ARF H H N N 19 ARG N N N N 20 ARG CA C N S 21 ARG C C N N 22 ARG O O N N 23 ARG CB C N N 24 ARG CG C N N 25 ARG CD C N N 26 ARG NE N N N 27 ARG CZ C N N 28 ARG NH1 N N N 29 ARG NH2 N N N 30 ARG OXT O N N 31 ARG H H N N 32 ARG H2 H N N 33 ARG HA H N N 34 ARG HB2 H N N 35 ARG HB3 H N N 36 ARG HG2 H N N 37 ARG HG3 H N N 38 ARG HD2 H N N 39 ARG HD3 H N N 40 ARG HE H N N 41 ARG HH11 H N N 42 ARG HH12 H N N 43 ARG HH21 H N N 44 ARG HH22 H N N 45 ARG HXT H N N 46 ASN N N N N 47 ASN CA C N S 48 ASN C C N N 49 ASN O O N N 50 ASN CB C N N 51 ASN CG C N N 52 ASN OD1 O N N 53 ASN ND2 N N N 54 ASN OXT O N N 55 ASN H H N N 56 ASN H2 H N N 57 ASN HA H N N 58 ASN HB2 H N N 59 ASN HB3 H N N 60 ASN HD21 H N N 61 ASN HD22 H N N 62 ASN HXT H N N 63 ASP N N N N 64 ASP CA C N S 65 ASP C C N N 66 ASP O O N N 67 ASP CB C N N 68 ASP CG C N N 69 ASP OD1 O N N 70 ASP OD2 O N N 71 ASP OXT O N N 72 ASP H H N N 73 ASP H2 H N N 74 ASP HA H N N 75 ASP HB2 H N N 76 ASP HB3 H N N 77 ASP HD2 H N N 78 ASP HXT H N N 79 CL CL CL N N 80 CYS N N N N 81 CYS CA C N R 82 CYS C C N N 83 CYS O O N N 84 CYS CB C N N 85 CYS SG S N N 86 CYS OXT O N N 87 CYS H H N N 88 CYS H2 H N N 89 CYS HA H N N 90 CYS HB2 H N N 91 CYS HB3 H N N 92 CYS HG H N N 93 CYS HXT H N N 94 DMS S S N N 95 DMS O O N N 96 DMS C1 C N N 97 DMS C2 C N N 98 DMS H11 H N N 99 DMS H12 H N N 100 DMS H13 H N N 101 DMS H21 H N N 102 DMS H22 H N N 103 DMS H23 H N N 104 GLN N N N N 105 GLN CA C N S 106 GLN C C N N 107 GLN O O N N 108 GLN CB C N N 109 GLN CG C N N 110 GLN CD C N N 111 GLN OE1 O N N 112 GLN NE2 N N N 113 GLN OXT O N N 114 GLN H H N N 115 GLN H2 H N N 116 GLN HA H N N 117 GLN HB2 H N N 118 GLN HB3 H N N 119 GLN HG2 H N N 120 GLN HG3 H N N 121 GLN HE21 H N N 122 GLN HE22 H N N 123 GLN HXT H N N 124 GLU N N N N 125 GLU CA C N S 126 GLU C C N N 127 GLU O O N N 128 GLU CB C N N 129 GLU CG C N N 130 GLU CD C N N 131 GLU OE1 O N N 132 GLU OE2 O N N 133 GLU OXT O N N 134 GLU H H N N 135 GLU H2 H N N 136 GLU HA H N N 137 GLU HB2 H N N 138 GLU HB3 H N N 139 GLU HG2 H N N 140 GLU HG3 H N N 141 GLU HE2 H N N 142 GLU HXT H N N 143 GLY N N N N 144 GLY CA C N N 145 GLY C C N N 146 GLY O O N N 147 GLY OXT O N N 148 GLY H H N N 149 GLY H2 H N N 150 GLY HA2 H N N 151 GLY HA3 H N N 152 GLY HXT H N N 153 HIS N N N N 154 HIS CA C N S 155 HIS C C N N 156 HIS O O N N 157 HIS CB C N N 158 HIS CG C Y N 159 HIS ND1 N Y N 160 HIS CD2 C Y N 161 HIS CE1 C Y N 162 HIS NE2 N Y N 163 HIS OXT O N N 164 HIS H H N N 165 HIS H2 H N N 166 HIS HA H N N 167 HIS HB2 H N N 168 HIS HB3 H N N 169 HIS HD1 H N N 170 HIS HD2 H N N 171 HIS HE1 H N N 172 HIS HE2 H N N 173 HIS HXT H N N 174 HOH O O N N 175 HOH H1 H N N 176 HOH H2 H N N 177 ILE N N N N 178 ILE CA C N S 179 ILE C C N N 180 ILE O O N N 181 ILE CB C N S 182 ILE CG1 C N N 183 ILE CG2 C N N 184 ILE CD1 C N N 185 ILE OXT O N N 186 ILE H H N N 187 ILE H2 H N N 188 ILE HA H N N 189 ILE HB H N N 190 ILE HG12 H N N 191 ILE HG13 H N N 192 ILE HG21 H N N 193 ILE HG22 H N N 194 ILE HG23 H N N 195 ILE HD11 H N N 196 ILE HD12 H N N 197 ILE HD13 H N N 198 ILE HXT H N N 199 LEU N N N N 200 LEU CA C N S 201 LEU C C N N 202 LEU O O N N 203 LEU CB C N N 204 LEU CG C N N 205 LEU CD1 C N N 206 LEU CD2 C N N 207 LEU OXT O N N 208 LEU H H N N 209 LEU H2 H N N 210 LEU HA H N N 211 LEU HB2 H N N 212 LEU HB3 H N N 213 LEU HG H N N 214 LEU HD11 H N N 215 LEU HD12 H N N 216 LEU HD13 H N N 217 LEU HD21 H N N 218 LEU HD22 H N N 219 LEU HD23 H N N 220 LEU HXT H N N 221 LYS N N N N 222 LYS CA C N S 223 LYS C C N N 224 LYS O O N N 225 LYS CB C N N 226 LYS CG C N N 227 LYS CD C N N 228 LYS CE C N N 229 LYS NZ N N N 230 LYS OXT O N N 231 LYS H H N N 232 LYS H2 H N N 233 LYS HA H N N 234 LYS HB2 H N N 235 LYS HB3 H N N 236 LYS HG2 H N N 237 LYS HG3 H N N 238 LYS HD2 H N N 239 LYS HD3 H N N 240 LYS HE2 H N N 241 LYS HE3 H N N 242 LYS HZ1 H N N 243 LYS HZ2 H N N 244 LYS HZ3 H N N 245 LYS HXT H N N 246 MET N N N N 247 MET CA C N S 248 MET C C N N 249 MET O O N N 250 MET CB C N N 251 MET CG C N N 252 MET SD S N N 253 MET CE C N N 254 MET OXT O N N 255 MET H H N N 256 MET H2 H N N 257 MET HA H N N 258 MET HB2 H N N 259 MET HB3 H N N 260 MET HG2 H N N 261 MET HG3 H N N 262 MET HE1 H N N 263 MET HE2 H N N 264 MET HE3 H N N 265 MET HXT H N N 266 NA NA NA N N 267 PHE N N N N 268 PHE CA C N S 269 PHE C C N N 270 PHE O O N N 271 PHE CB C N N 272 PHE CG C Y N 273 PHE CD1 C Y N 274 PHE CD2 C Y N 275 PHE CE1 C Y N 276 PHE CE2 C Y N 277 PHE CZ C Y N 278 PHE OXT O N N 279 PHE H H N N 280 PHE H2 H N N 281 PHE HA H N N 282 PHE HB2 H N N 283 PHE HB3 H N N 284 PHE HD1 H N N 285 PHE HD2 H N N 286 PHE HE1 H N N 287 PHE HE2 H N N 288 PHE HZ H N N 289 PHE HXT H N N 290 PRO N N N N 291 PRO CA C N S 292 PRO C C N N 293 PRO O O N N 294 PRO CB C N N 295 PRO CG C N N 296 PRO CD C N N 297 PRO OXT O N N 298 PRO H H N N 299 PRO HA H N N 300 PRO HB2 H N N 301 PRO HB3 H N N 302 PRO HG2 H N N 303 PRO HG3 H N N 304 PRO HD2 H N N 305 PRO HD3 H N N 306 PRO HXT H N N 307 ROC C C N N 308 ROC O O N N 309 ROC N1 N Y N 310 ROC C2 C Y N 311 ROC C3 C Y N 312 ROC C4 C Y N 313 ROC C5 C Y N 314 ROC C6 C Y N 315 ROC C7 C Y N 316 ROC C8 C Y N 317 ROC C4A C Y N 318 ROC C8A C Y N 319 ROC N N N N 320 ROC CA C N S 321 ROC C1 C N N 322 ROC O1 O N N 323 ROC CB C N N 324 ROC CG C N N 325 ROC OD1 O N N 326 ROC ND2 N N N 327 ROC C9 C N R 328 ROC O2 O N N 329 ROC CA1 C N S 330 ROC N2 N N N 331 ROC CB1 C N N 332 ROC CG1 C Y N 333 ROC CD1 C Y N 334 ROC CD2 C Y N 335 ROC CE1 C Y N 336 ROC CE2 C Y N 337 ROC CZ C Y N 338 ROC N11 N N N 339 ROC CM C N N 340 ROC C21 C N S 341 ROC CC C N N 342 ROC O3 O N N 343 ROC C31 C N N 344 ROC C3A C N S 345 ROC C41 C N N 346 ROC C51 C N N 347 ROC C61 C N N 348 ROC C71 C N N 349 ROC C7A C N S 350 ROC C81 C N N 351 ROC N3 N N N 352 ROC CD C N N 353 ROC C11 C N N 354 ROC C22 C N N 355 ROC C32 C N N 356 ROC H3 H N N 357 ROC H4 H N N 358 ROC H5 H N N 359 ROC H6 H N N 360 ROC H7 H N N 361 ROC H8 H N N 362 ROC H H N N 363 ROC HA H N N 364 ROC HB2 H N N 365 ROC HB3 H N N 366 ROC HD21 H N N 367 ROC HD22 H N N 368 ROC HC H N N 369 ROC HO H N N 370 ROC HA1 H N N 371 ROC H1 H N N 372 ROC HB21 H N N 373 ROC HB31 H N N 374 ROC HD1 H N N 375 ROC HD2 H N N 376 ROC HE1 H N N 377 ROC HE2 H N N 378 ROC HZ H N N 379 ROC HM1 H N N 380 ROC HM2 H N N 381 ROC H2 H N N 382 ROC H31 H N N 383 ROC H32 H N N 384 ROC H3A H N N 385 ROC H41 H N N 386 ROC H42 H N N 387 ROC H51 H N N 388 ROC H52 H N N 389 ROC H61 H N N 390 ROC H62 H N N 391 ROC H71 H N N 392 ROC H72 H N N 393 ROC H7A H N N 394 ROC H81 H N N 395 ROC H82 H N N 396 ROC HN1 H N N 397 ROC H11 H N N 398 ROC H12 H N N 399 ROC H13 H N N 400 ROC H21 H N N 401 ROC H22 H N N 402 ROC H23 H N N 403 ROC H311 H N N 404 ROC H321 H N N 405 ROC H33 H N N 406 SER N N N N 407 SER CA C N S 408 SER C C N N 409 SER O O N N 410 SER CB C N N 411 SER OG O N N 412 SER OXT O N N 413 SER H H N N 414 SER H2 H N N 415 SER HA H N N 416 SER HB2 H N N 417 SER HB3 H N N 418 SER HG H N N 419 SER HXT H N N 420 THR N N N N 421 THR CA C N S 422 THR C C N N 423 THR O O N N 424 THR CB C N R 425 THR OG1 O N N 426 THR CG2 C N N 427 THR OXT O N N 428 THR H H N N 429 THR H2 H N N 430 THR HA H N N 431 THR HB H N N 432 THR HG1 H N N 433 THR HG21 H N N 434 THR HG22 H N N 435 THR HG23 H N N 436 THR HXT H N N 437 TRP N N N N 438 TRP CA C N S 439 TRP C C N N 440 TRP O O N N 441 TRP CB C N N 442 TRP CG C Y N 443 TRP CD1 C Y N 444 TRP CD2 C Y N 445 TRP NE1 N Y N 446 TRP CE2 C Y N 447 TRP CE3 C Y N 448 TRP CZ2 C Y N 449 TRP CZ3 C Y N 450 TRP CH2 C Y N 451 TRP OXT O N N 452 TRP H H N N 453 TRP H2 H N N 454 TRP HA H N N 455 TRP HB2 H N N 456 TRP HB3 H N N 457 TRP HD1 H N N 458 TRP HE1 H N N 459 TRP HE3 H N N 460 TRP HZ2 H N N 461 TRP HZ3 H N N 462 TRP HH2 H N N 463 TRP HXT H N N 464 TYR N N N N 465 TYR CA C N S 466 TYR C C N N 467 TYR O O N N 468 TYR CB C N N 469 TYR CG C Y N 470 TYR CD1 C Y N 471 TYR CD2 C Y N 472 TYR CE1 C Y N 473 TYR CE2 C Y N 474 TYR CZ C Y N 475 TYR OH O N N 476 TYR OXT O N N 477 TYR H H N N 478 TYR H2 H N N 479 TYR HA H N N 480 TYR HB2 H N N 481 TYR HB3 H N N 482 TYR HD1 H N N 483 TYR HD2 H N N 484 TYR HE1 H N N 485 TYR HE2 H N N 486 TYR HH H N N 487 TYR HXT H N N 488 VAL N N N N 489 VAL CA C N S 490 VAL C C N N 491 VAL O O N N 492 VAL CB C N N 493 VAL CG1 C N N 494 VAL CG2 C N N 495 VAL OXT O N N 496 VAL H H N N 497 VAL H2 H N N 498 VAL HA H N N 499 VAL HB H N N 500 VAL HG11 H N N 501 VAL HG12 H N N 502 VAL HG13 H N N 503 VAL HG21 H N N 504 VAL HG22 H N N 505 VAL HG23 H N N 506 VAL HXT H N N 507 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARF N C sing N N 13 ARF N HN1 sing N N 14 ARF N HN2 sing N N 15 ARF C O doub N N 16 ARF C H sing N N 17 ARG N CA sing N N 18 ARG N H sing N N 19 ARG N H2 sing N N 20 ARG CA C sing N N 21 ARG CA CB sing N N 22 ARG CA HA sing N N 23 ARG C O doub N N 24 ARG C OXT sing N N 25 ARG CB CG sing N N 26 ARG CB HB2 sing N N 27 ARG CB HB3 sing N N 28 ARG CG CD sing N N 29 ARG CG HG2 sing N N 30 ARG CG HG3 sing N N 31 ARG CD NE sing N N 32 ARG CD HD2 sing N N 33 ARG CD HD3 sing N N 34 ARG NE CZ sing N N 35 ARG NE HE sing N N 36 ARG CZ NH1 sing N N 37 ARG CZ NH2 doub N N 38 ARG NH1 HH11 sing N N 39 ARG NH1 HH12 sing N N 40 ARG NH2 HH21 sing N N 41 ARG NH2 HH22 sing N N 42 ARG OXT HXT sing N N 43 ASN N CA sing N N 44 ASN N H sing N N 45 ASN N H2 sing N N 46 ASN CA C sing N N 47 ASN CA CB sing N N 48 ASN CA HA sing N N 49 ASN C O doub N N 50 ASN C OXT sing N N 51 ASN CB CG sing N N 52 ASN CB HB2 sing N N 53 ASN CB HB3 sing N N 54 ASN CG OD1 doub N N 55 ASN CG ND2 sing N N 56 ASN ND2 HD21 sing N N 57 ASN ND2 HD22 sing N N 58 ASN OXT HXT sing N N 59 ASP N CA sing N N 60 ASP N H sing N N 61 ASP N H2 sing N N 62 ASP CA C sing N N 63 ASP CA CB sing N N 64 ASP CA HA sing N N 65 ASP C O doub N N 66 ASP C OXT sing N N 67 ASP CB CG sing N N 68 ASP CB HB2 sing N N 69 ASP CB HB3 sing N N 70 ASP CG OD1 doub N N 71 ASP CG OD2 sing N N 72 ASP OD2 HD2 sing N N 73 ASP OXT HXT sing N N 74 CYS N CA sing N N 75 CYS N H sing N N 76 CYS N H2 sing N N 77 CYS CA C sing N N 78 CYS CA CB sing N N 79 CYS CA HA sing N N 80 CYS C O doub N N 81 CYS C OXT sing N N 82 CYS CB SG sing N N 83 CYS CB HB2 sing N N 84 CYS CB HB3 sing N N 85 CYS SG HG sing N N 86 CYS OXT HXT sing N N 87 DMS S O doub N N 88 DMS S C1 sing N N 89 DMS S C2 sing N N 90 DMS C1 H11 sing N N 91 DMS C1 H12 sing N N 92 DMS C1 H13 sing N N 93 DMS C2 H21 sing N N 94 DMS C2 H22 sing N N 95 DMS C2 H23 sing N N 96 GLN N CA sing N N 97 GLN N H sing N N 98 GLN N H2 sing N N 99 GLN CA C sing N N 100 GLN CA CB sing N N 101 GLN CA HA sing N N 102 GLN C O doub N N 103 GLN C OXT sing N N 104 GLN CB CG sing N N 105 GLN CB HB2 sing N N 106 GLN CB HB3 sing N N 107 GLN CG CD sing N N 108 GLN CG HG2 sing N N 109 GLN CG HG3 sing N N 110 GLN CD OE1 doub N N 111 GLN CD NE2 sing N N 112 GLN NE2 HE21 sing N N 113 GLN NE2 HE22 sing N N 114 GLN OXT HXT sing N N 115 GLU N CA sing N N 116 GLU N H sing N N 117 GLU N H2 sing N N 118 GLU CA C sing N N 119 GLU CA CB sing N N 120 GLU CA HA sing N N 121 GLU C O doub N N 122 GLU C OXT sing N N 123 GLU CB CG sing N N 124 GLU CB HB2 sing N N 125 GLU CB HB3 sing N N 126 GLU CG CD sing N N 127 GLU CG HG2 sing N N 128 GLU CG HG3 sing N N 129 GLU CD OE1 doub N N 130 GLU CD OE2 sing N N 131 GLU OE2 HE2 sing N N 132 GLU OXT HXT sing N N 133 GLY N CA sing N N 134 GLY N H sing N N 135 GLY N H2 sing N N 136 GLY CA C sing N N 137 GLY CA HA2 sing N N 138 GLY CA HA3 sing N N 139 GLY C O doub N N 140 GLY C OXT sing N N 141 GLY OXT HXT sing N N 142 HIS N CA sing N N 143 HIS N H sing N N 144 HIS N H2 sing N N 145 HIS CA C sing N N 146 HIS CA CB sing N N 147 HIS CA HA sing N N 148 HIS C O doub N N 149 HIS C OXT sing N N 150 HIS CB CG sing N N 151 HIS CB HB2 sing N N 152 HIS CB HB3 sing N N 153 HIS CG ND1 sing Y N 154 HIS CG CD2 doub Y N 155 HIS ND1 CE1 doub Y N 156 HIS ND1 HD1 sing N N 157 HIS CD2 NE2 sing Y N 158 HIS CD2 HD2 sing N N 159 HIS CE1 NE2 sing Y N 160 HIS CE1 HE1 sing N N 161 HIS NE2 HE2 sing N N 162 HIS OXT HXT sing N N 163 HOH O H1 sing N N 164 HOH O H2 sing N N 165 ILE N CA sing N N 166 ILE N H sing N N 167 ILE N H2 sing N N 168 ILE CA C sing N N 169 ILE CA CB sing N N 170 ILE CA HA sing N N 171 ILE C O doub N N 172 ILE C OXT sing N N 173 ILE CB CG1 sing N N 174 ILE CB CG2 sing N N 175 ILE CB HB sing N N 176 ILE CG1 CD1 sing N N 177 ILE CG1 HG12 sing N N 178 ILE CG1 HG13 sing N N 179 ILE CG2 HG21 sing N N 180 ILE CG2 HG22 sing N N 181 ILE CG2 HG23 sing N N 182 ILE CD1 HD11 sing N N 183 ILE CD1 HD12 sing N N 184 ILE CD1 HD13 sing N N 185 ILE OXT HXT sing N N 186 LEU N CA sing N N 187 LEU N H sing N N 188 LEU N H2 sing N N 189 LEU CA C sing N N 190 LEU CA CB sing N N 191 LEU CA HA sing N N 192 LEU C O doub N N 193 LEU C OXT sing N N 194 LEU CB CG sing N N 195 LEU CB HB2 sing N N 196 LEU CB HB3 sing N N 197 LEU CG CD1 sing N N 198 LEU CG CD2 sing N N 199 LEU CG HG sing N N 200 LEU CD1 HD11 sing N N 201 LEU CD1 HD12 sing N N 202 LEU CD1 HD13 sing N N 203 LEU CD2 HD21 sing N N 204 LEU CD2 HD22 sing N N 205 LEU CD2 HD23 sing N N 206 LEU OXT HXT sing N N 207 LYS N CA sing N N 208 LYS N H sing N N 209 LYS N H2 sing N N 210 LYS CA C sing N N 211 LYS CA CB sing N N 212 LYS CA HA sing N N 213 LYS C O doub N N 214 LYS C OXT sing N N 215 LYS CB CG sing N N 216 LYS CB HB2 sing N N 217 LYS CB HB3 sing N N 218 LYS CG CD sing N N 219 LYS CG HG2 sing N N 220 LYS CG HG3 sing N N 221 LYS CD CE sing N N 222 LYS CD HD2 sing N N 223 LYS CD HD3 sing N N 224 LYS CE NZ sing N N 225 LYS CE HE2 sing N N 226 LYS CE HE3 sing N N 227 LYS NZ HZ1 sing N N 228 LYS NZ HZ2 sing N N 229 LYS NZ HZ3 sing N N 230 LYS OXT HXT sing N N 231 MET N CA sing N N 232 MET N H sing N N 233 MET N H2 sing N N 234 MET CA C sing N N 235 MET CA CB sing N N 236 MET CA HA sing N N 237 MET C O doub N N 238 MET C OXT sing N N 239 MET CB CG sing N N 240 MET CB HB2 sing N N 241 MET CB HB3 sing N N 242 MET CG SD sing N N 243 MET CG HG2 sing N N 244 MET CG HG3 sing N N 245 MET SD CE sing N N 246 MET CE HE1 sing N N 247 MET CE HE2 sing N N 248 MET CE HE3 sing N N 249 MET OXT HXT sing N N 250 PHE N CA sing N N 251 PHE N H sing N N 252 PHE N H2 sing N N 253 PHE CA C sing N N 254 PHE CA CB sing N N 255 PHE CA HA sing N N 256 PHE C O doub N N 257 PHE C OXT sing N N 258 PHE CB CG sing N N 259 PHE CB HB2 sing N N 260 PHE CB HB3 sing N N 261 PHE CG CD1 doub Y N 262 PHE CG CD2 sing Y N 263 PHE CD1 CE1 sing Y N 264 PHE CD1 HD1 sing N N 265 PHE CD2 CE2 doub Y N 266 PHE CD2 HD2 sing N N 267 PHE CE1 CZ doub Y N 268 PHE CE1 HE1 sing N N 269 PHE CE2 CZ sing Y N 270 PHE CE2 HE2 sing N N 271 PHE CZ HZ sing N N 272 PHE OXT HXT sing N N 273 PRO N CA sing N N 274 PRO N CD sing N N 275 PRO N H sing N N 276 PRO CA C sing N N 277 PRO CA CB sing N N 278 PRO CA HA sing N N 279 PRO C O doub N N 280 PRO C OXT sing N N 281 PRO CB CG sing N N 282 PRO CB HB2 sing N N 283 PRO CB HB3 sing N N 284 PRO CG CD sing N N 285 PRO CG HG2 sing N N 286 PRO CG HG3 sing N N 287 PRO CD HD2 sing N N 288 PRO CD HD3 sing N N 289 PRO OXT HXT sing N N 290 ROC O C doub N N 291 ROC C C2 sing N N 292 ROC N1 C2 doub Y N 293 ROC N1 C8A sing Y N 294 ROC C2 C3 sing Y N 295 ROC C3 C4 doub Y N 296 ROC C3 H3 sing N N 297 ROC C4 C4A sing Y N 298 ROC C4 H4 sing N N 299 ROC C4A C5 doub Y N 300 ROC C4A C8A sing Y N 301 ROC C5 C6 sing Y N 302 ROC C5 H5 sing N N 303 ROC C6 C7 doub Y N 304 ROC C6 H6 sing N N 305 ROC C7 C8 sing Y N 306 ROC C7 H7 sing N N 307 ROC C8 C8A doub Y N 308 ROC C8 H8 sing N N 309 ROC N CA sing N N 310 ROC N H sing N N 311 ROC CA C1 sing N N 312 ROC CA CB sing N N 313 ROC CA HA sing N N 314 ROC C1 O1 doub N N 315 ROC CB CG sing N N 316 ROC CB HB2 sing N N 317 ROC CB HB3 sing N N 318 ROC CG OD1 doub N N 319 ROC CG ND2 sing N N 320 ROC ND2 HD21 sing N N 321 ROC ND2 HD22 sing N N 322 ROC C9 O2 sing N N 323 ROC C9 CA1 sing N N 324 ROC C9 HC sing N N 325 ROC O2 HO sing N N 326 ROC CA1 N2 sing N N 327 ROC CA1 CB1 sing N N 328 ROC CA1 HA1 sing N N 329 ROC N2 H1 sing N N 330 ROC CB1 CG1 sing N N 331 ROC CB1 HB21 sing N N 332 ROC CB1 HB31 sing N N 333 ROC CG1 CD1 doub Y N 334 ROC CG1 CD2 sing Y N 335 ROC CD1 CE1 sing Y N 336 ROC CD1 HD1 sing N N 337 ROC CD2 CE2 doub Y N 338 ROC CD2 HD2 sing N N 339 ROC CE1 CZ doub Y N 340 ROC CE1 HE1 sing N N 341 ROC CE2 CZ sing Y N 342 ROC CE2 HE2 sing N N 343 ROC CZ HZ sing N N 344 ROC N11 CM sing N N 345 ROC N11 C21 sing N N 346 ROC N11 C81 sing N N 347 ROC CM HM1 sing N N 348 ROC CM HM2 sing N N 349 ROC C21 CC sing N N 350 ROC C21 C31 sing N N 351 ROC C21 H2 sing N N 352 ROC CC O3 doub N N 353 ROC C31 C3A sing N N 354 ROC C31 H31 sing N N 355 ROC C31 H32 sing N N 356 ROC C3A C41 sing N N 357 ROC C3A C7A sing N N 358 ROC C3A H3A sing N N 359 ROC C41 C51 sing N N 360 ROC C41 H41 sing N N 361 ROC C41 H42 sing N N 362 ROC C51 C61 sing N N 363 ROC C51 H51 sing N N 364 ROC C51 H52 sing N N 365 ROC C61 C71 sing N N 366 ROC C61 H61 sing N N 367 ROC C61 H62 sing N N 368 ROC C71 C7A sing N N 369 ROC C71 H71 sing N N 370 ROC C71 H72 sing N N 371 ROC C7A C81 sing N N 372 ROC C7A H7A sing N N 373 ROC C81 H81 sing N N 374 ROC C81 H82 sing N N 375 ROC N3 CD sing N N 376 ROC N3 HN1 sing N N 377 ROC CD C11 sing N N 378 ROC CD C22 sing N N 379 ROC CD C32 sing N N 380 ROC C11 H11 sing N N 381 ROC C11 H12 sing N N 382 ROC C11 H13 sing N N 383 ROC C22 H21 sing N N 384 ROC C22 H22 sing N N 385 ROC C22 H23 sing N N 386 ROC C32 H311 sing N N 387 ROC C32 H321 sing N N 388 ROC C32 H33 sing N N 389 ROC C N sing N N 390 ROC C1 N2 sing N N 391 ROC C9 CM sing N N 392 ROC CC N3 sing N N 393 SER N CA sing N N 394 SER N H sing N N 395 SER N H2 sing N N 396 SER CA C sing N N 397 SER CA CB sing N N 398 SER CA HA sing N N 399 SER C O doub N N 400 SER C OXT sing N N 401 SER CB OG sing N N 402 SER CB HB2 sing N N 403 SER CB HB3 sing N N 404 SER OG HG sing N N 405 SER OXT HXT sing N N 406 THR N CA sing N N 407 THR N H sing N N 408 THR N H2 sing N N 409 THR CA C sing N N 410 THR CA CB sing N N 411 THR CA HA sing N N 412 THR C O doub N N 413 THR C OXT sing N N 414 THR CB OG1 sing N N 415 THR CB CG2 sing N N 416 THR CB HB sing N N 417 THR OG1 HG1 sing N N 418 THR CG2 HG21 sing N N 419 THR CG2 HG22 sing N N 420 THR CG2 HG23 sing N N 421 THR OXT HXT sing N N 422 TRP N CA sing N N 423 TRP N H sing N N 424 TRP N H2 sing N N 425 TRP CA C sing N N 426 TRP CA CB sing N N 427 TRP CA HA sing N N 428 TRP C O doub N N 429 TRP C OXT sing N N 430 TRP CB CG sing N N 431 TRP CB HB2 sing N N 432 TRP CB HB3 sing N N 433 TRP CG CD1 doub Y N 434 TRP CG CD2 sing Y N 435 TRP CD1 NE1 sing Y N 436 TRP CD1 HD1 sing N N 437 TRP CD2 CE2 doub Y N 438 TRP CD2 CE3 sing Y N 439 TRP NE1 CE2 sing Y N 440 TRP NE1 HE1 sing N N 441 TRP CE2 CZ2 sing Y N 442 TRP CE3 CZ3 doub Y N 443 TRP CE3 HE3 sing N N 444 TRP CZ2 CH2 doub Y N 445 TRP CZ2 HZ2 sing N N 446 TRP CZ3 CH2 sing Y N 447 TRP CZ3 HZ3 sing N N 448 TRP CH2 HH2 sing N N 449 TRP OXT HXT sing N N 450 TYR N CA sing N N 451 TYR N H sing N N 452 TYR N H2 sing N N 453 TYR CA C sing N N 454 TYR CA CB sing N N 455 TYR CA HA sing N N 456 TYR C O doub N N 457 TYR C OXT sing N N 458 TYR CB CG sing N N 459 TYR CB HB2 sing N N 460 TYR CB HB3 sing N N 461 TYR CG CD1 doub Y N 462 TYR CG CD2 sing Y N 463 TYR CD1 CE1 sing Y N 464 TYR CD1 HD1 sing N N 465 TYR CD2 CE2 doub Y N 466 TYR CD2 HD2 sing N N 467 TYR CE1 CZ doub Y N 468 TYR CE1 HE1 sing N N 469 TYR CE2 CZ sing Y N 470 TYR CE2 HE2 sing N N 471 TYR CZ OH sing N N 472 TYR OH HH sing N N 473 TYR OXT HXT sing N N 474 VAL N CA sing N N 475 VAL N H sing N N 476 VAL N H2 sing N N 477 VAL CA C sing N N 478 VAL CA CB sing N N 479 VAL CA HA sing N N 480 VAL C O doub N N 481 VAL C OXT sing N N 482 VAL CB CG1 sing N N 483 VAL CB CG2 sing N N 484 VAL CB HB sing N N 485 VAL CG1 HG11 sing N N 486 VAL CG1 HG12 sing N N 487 VAL CG1 HG13 sing N N 488 VAL CG2 HG21 sing N N 489 VAL CG2 HG22 sing N N 490 VAL CG2 HG23 sing N N 491 VAL OXT HXT sing N N 492 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;(2S)-N-[(2S,3R)-4-[(2S,3S,4aS,8aS)-3-(tert-butylcarbamoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-2-yl]-3-hydroxy-1 -phenyl-butan-2-yl]-2-(quinolin-2-ylcarbonylamino)butanediamide ; ROC 3 'CHLORIDE ION' CL 4 'DIMETHYL SULFOXIDE' DMS 5 'SODIUM ION' NA 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3K4V _pdbx_initial_refinement_model.details 'pdb entry 3K4V' #