data_3NE8 # _entry.id 3NE8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3NE8 RCSB RCSB059718 WWPDB D_1000059718 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC62366.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3NE8 _pdbx_database_status.recvd_initial_deposition_date 2010-06-08 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tan, K.' 1 'Rakowski, E.' 2 'Buck, K.' 3 'Joachimiak, A.' 4 'Midwest Center for Structural Genomics (MCSG)' 5 # _citation.id primary _citation.title 'A conformational switch controls cell wall-remodelling enzymes required for bacterial cell division.' _citation.journal_abbrev Mol.Microbiol. _citation.journal_volume 85 _citation.page_first 768 _citation.page_last 781 _citation.year 2012 _citation.journal_id_ASTM MOMIEE _citation.country UK _citation.journal_id_ISSN 0950-382X _citation.journal_id_CSD 2007 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22715947 _citation.pdbx_database_id_DOI 10.1111/j.1365-2958.2012.08138.x # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Yang, D.C.' 1 primary 'Tan, K.' 2 primary 'Joachimiak, A.' 3 primary 'Bernhardt, T.G.' 4 # _cell.entry_id 3NE8 _cell.length_a 71.185 _cell.length_b 53.511 _cell.length_c 58.495 _cell.angle_alpha 90.00 _cell.angle_beta 90.46 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3NE8 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'N-acetylmuramoyl-l-alanine amidase' 26169.201 1 ? ? 'sequence database residues 179-409' ? 2 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 3 non-polymer syn 'ACETATE ION' 59.044 3 ? ? ? ? 4 non-polymer syn 'FORMIC ACID' 46.025 1 ? ? ? ? 5 non-polymer syn GLYCEROL 92.094 3 ? ? ? ? 6 water nat water 18.015 256 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNASFRVVLDPGHGGIDGGARGVTGILEKDVTLAFARALRDELQKGSHTIVALTRDSDIFLRLSERVKKAQEFDADLFIS IHADTIDVHSLRGATVYTISDEASDAIAKSLAESENKVDLLDGLPKEESLELTDILLDLTRRETHAFSINFANNVVSNLS KSHINLINNPHRYADFQVLKAPDVPSVLIEIGYLSNKEDEKLLNNPQWRKQ(MSE)AASIAYSIRQFAEYRQKI(MSE)Q PL ; _entity_poly.pdbx_seq_one_letter_code_can ;SNASFRVVLDPGHGGIDGGARGVTGILEKDVTLAFARALRDELQKGSHTIVALTRDSDIFLRLSERVKKAQEFDADLFIS IHADTIDVHSLRGATVYTISDEASDAIAKSLAESENKVDLLDGLPKEESLELTDILLDLTRRETHAFSINFANNVVSNLS KSHINLINNPHRYADFQVLKAPDVPSVLIEIGYLSNKEDEKLLNNPQWRKQMAASIAYSIRQFAEYRQKIMQPL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier APC62366.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 SER n 1 5 PHE n 1 6 ARG n 1 7 VAL n 1 8 VAL n 1 9 LEU n 1 10 ASP n 1 11 PRO n 1 12 GLY n 1 13 HIS n 1 14 GLY n 1 15 GLY n 1 16 ILE n 1 17 ASP n 1 18 GLY n 1 19 GLY n 1 20 ALA n 1 21 ARG n 1 22 GLY n 1 23 VAL n 1 24 THR n 1 25 GLY n 1 26 ILE n 1 27 LEU n 1 28 GLU n 1 29 LYS n 1 30 ASP n 1 31 VAL n 1 32 THR n 1 33 LEU n 1 34 ALA n 1 35 PHE n 1 36 ALA n 1 37 ARG n 1 38 ALA n 1 39 LEU n 1 40 ARG n 1 41 ASP n 1 42 GLU n 1 43 LEU n 1 44 GLN n 1 45 LYS n 1 46 GLY n 1 47 SER n 1 48 HIS n 1 49 THR n 1 50 ILE n 1 51 VAL n 1 52 ALA n 1 53 LEU n 1 54 THR n 1 55 ARG n 1 56 ASP n 1 57 SER n 1 58 ASP n 1 59 ILE n 1 60 PHE n 1 61 LEU n 1 62 ARG n 1 63 LEU n 1 64 SER n 1 65 GLU n 1 66 ARG n 1 67 VAL n 1 68 LYS n 1 69 LYS n 1 70 ALA n 1 71 GLN n 1 72 GLU n 1 73 PHE n 1 74 ASP n 1 75 ALA n 1 76 ASP n 1 77 LEU n 1 78 PHE n 1 79 ILE n 1 80 SER n 1 81 ILE n 1 82 HIS n 1 83 ALA n 1 84 ASP n 1 85 THR n 1 86 ILE n 1 87 ASP n 1 88 VAL n 1 89 HIS n 1 90 SER n 1 91 LEU n 1 92 ARG n 1 93 GLY n 1 94 ALA n 1 95 THR n 1 96 VAL n 1 97 TYR n 1 98 THR n 1 99 ILE n 1 100 SER n 1 101 ASP n 1 102 GLU n 1 103 ALA n 1 104 SER n 1 105 ASP n 1 106 ALA n 1 107 ILE n 1 108 ALA n 1 109 LYS n 1 110 SER n 1 111 LEU n 1 112 ALA n 1 113 GLU n 1 114 SER n 1 115 GLU n 1 116 ASN n 1 117 LYS n 1 118 VAL n 1 119 ASP n 1 120 LEU n 1 121 LEU n 1 122 ASP n 1 123 GLY n 1 124 LEU n 1 125 PRO n 1 126 LYS n 1 127 GLU n 1 128 GLU n 1 129 SER n 1 130 LEU n 1 131 GLU n 1 132 LEU n 1 133 THR n 1 134 ASP n 1 135 ILE n 1 136 LEU n 1 137 LEU n 1 138 ASP n 1 139 LEU n 1 140 THR n 1 141 ARG n 1 142 ARG n 1 143 GLU n 1 144 THR n 1 145 HIS n 1 146 ALA n 1 147 PHE n 1 148 SER n 1 149 ILE n 1 150 ASN n 1 151 PHE n 1 152 ALA n 1 153 ASN n 1 154 ASN n 1 155 VAL n 1 156 VAL n 1 157 SER n 1 158 ASN n 1 159 LEU n 1 160 SER n 1 161 LYS n 1 162 SER n 1 163 HIS n 1 164 ILE n 1 165 ASN n 1 166 LEU n 1 167 ILE n 1 168 ASN n 1 169 ASN n 1 170 PRO n 1 171 HIS n 1 172 ARG n 1 173 TYR n 1 174 ALA n 1 175 ASP n 1 176 PHE n 1 177 GLN n 1 178 VAL n 1 179 LEU n 1 180 LYS n 1 181 ALA n 1 182 PRO n 1 183 ASP n 1 184 VAL n 1 185 PRO n 1 186 SER n 1 187 VAL n 1 188 LEU n 1 189 ILE n 1 190 GLU n 1 191 ILE n 1 192 GLY n 1 193 TYR n 1 194 LEU n 1 195 SER n 1 196 ASN n 1 197 LYS n 1 198 GLU n 1 199 ASP n 1 200 GLU n 1 201 LYS n 1 202 LEU n 1 203 LEU n 1 204 ASN n 1 205 ASN n 1 206 PRO n 1 207 GLN n 1 208 TRP n 1 209 ARG n 1 210 LYS n 1 211 GLN n 1 212 MSE n 1 213 ALA n 1 214 ALA n 1 215 SER n 1 216 ILE n 1 217 ALA n 1 218 TYR n 1 219 SER n 1 220 ILE n 1 221 ARG n 1 222 GLN n 1 223 PHE n 1 224 ALA n 1 225 GLU n 1 226 TYR n 1 227 ARG n 1 228 GLN n 1 229 LYS n 1 230 ILE n 1 231 MSE n 1 232 GLN n 1 233 PRO n 1 234 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'amiB, BH08710' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain Houston-1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bartonella henselae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 38323 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain pPK1037 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG19B _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q6G3B2_BARHE _struct_ref.pdbx_db_accession Q6G3B2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SFRVVLDPGHGGIDGGARGVTGILEKDVTLAFARALRDELQKGSHTIVALTRDSDIFLRLSERVKKAQEFDADLFISIHA DTIDVHSLRGATVYTISDEASDAIAKSLAESENKVDLLDGLPKEESLELTDILLDLTRRETHAFSINFANNVVSNLSKSH INLINNPHRYADFQVLKAPDVPSVLIEIGYLSNKEDEKLLNNPQWRKQMAASIAYSIRQFAEYRQKIMQPL ; _struct_ref.pdbx_align_begin 179 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3NE8 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 234 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q6G3B2 _struct_ref_seq.db_align_beg 179 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 409 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 179 _struct_ref_seq.pdbx_auth_seq_align_end 409 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3NE8 SER A 1 ? UNP Q6G3B2 ? ? 'EXPRESSION TAG' 176 1 1 3NE8 ASN A 2 ? UNP Q6G3B2 ? ? 'EXPRESSION TAG' 177 2 1 3NE8 ALA A 3 ? UNP Q6G3B2 ? ? 'EXPRESSION TAG' 178 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 FMT non-polymer . 'FORMIC ACID' ? 'C H2 O2' 46.025 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 3NE8 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.13 _exptl_crystal.density_percent_sol 42.21 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details ;0.1M Bis-Tris propane, 1.8M sodium acetate, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2010-06-04 _diffrn_detector.details mirror # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97934 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97934 # _reflns.entry_id 3NE8 _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 30 _reflns.d_resolution_high 1.24 _reflns.number_obs 61785 _reflns.number_all 61785 _reflns.percent_possible_obs 99.3 _reflns.pdbx_Rmerge_I_obs 0.07 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 28.2 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.24 _reflns_shell.d_res_low 1.26 _reflns_shell.percent_possible_all 90.7 _reflns_shell.Rmerge_I_obs 0.554 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.52 _reflns_shell.pdbx_redundancy 2.2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2765 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3NE8 _refine.ls_number_reflns_obs 58025 _refine.ls_number_reflns_all 58025 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0.03 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.247 _refine.ls_d_res_high 1.239 _refine.ls_percent_reflns_obs 93.03 _refine.ls_R_factor_obs 0.1613 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1606 _refine.ls_R_factor_R_free 0.1743 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.06 _refine.ls_number_reflns_R_free 2934 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 0.5271 _refine.aniso_B[2][2] 1.9150 _refine.aniso_B[3][3] -2.4421 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 1.0819 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.382 _refine.solvent_model_param_bsol 50.489 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.14 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error 17.57 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1776 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 256 _refine_hist.number_atoms_total 2066 _refine_hist.d_res_high 1.239 _refine_hist.d_res_low 29.247 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.005 ? ? 1969 'X-RAY DIFFRACTION' ? f_angle_d 0.985 ? ? 2684 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 17.302 ? ? 771 'X-RAY DIFFRACTION' ? f_chiral_restr 0.068 ? ? 307 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 ? ? 355 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.2390 1.2833 4412 0.2559 75.00 0.2439 . . 217 . . . . 'X-RAY DIFFRACTION' . 1.2833 1.3347 4996 0.2249 85.00 0.2576 . . 248 . . . . 'X-RAY DIFFRACTION' . 1.3347 1.3954 5278 0.1991 89.00 0.1938 . . 284 . . . . 'X-RAY DIFFRACTION' . 1.3954 1.4690 5405 0.1757 92.00 0.2144 . . 296 . . . . 'X-RAY DIFFRACTION' . 1.4690 1.5610 5625 0.1584 95.00 0.1922 . . 289 . . . . 'X-RAY DIFFRACTION' . 1.5610 1.6815 5763 0.1434 98.00 0.1564 . . 315 . . . . 'X-RAY DIFFRACTION' . 1.6815 1.8507 5853 0.1482 98.00 0.1610 . . 312 . . . . 'X-RAY DIFFRACTION' . 1.8507 2.1185 5885 0.1464 99.00 0.1566 . . 315 . . . . 'X-RAY DIFFRACTION' . 2.1185 2.6687 5920 0.1554 100.00 0.1779 . . 328 . . . . 'X-RAY DIFFRACTION' . 2.6687 29.2547 5954 0.1499 99.00 0.1536 . . 330 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 3NE8 _struct.title 'The crystal structure of a domain from N-acetylmuramoyl-l-alanine amidase of Bartonella henselae str. Houston-1' _struct.pdbx_descriptor 'N-acetylmuramoyl-l-alanine amidase' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag Y _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3NE8 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 5 ? H N N 5 ? I N N 5 ? J N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 27 ? GLY A 46 ? LEU A 202 GLY A 221 1 ? 20 HELX_P HELX_P2 2 ARG A 62 ? PHE A 73 ? ARG A 237 PHE A 248 1 ? 12 HELX_P HELX_P3 3 ASP A 105 ? LYS A 117 ? ASP A 280 LYS A 292 1 ? 13 HELX_P HELX_P4 4 VAL A 118 ? GLY A 123 ? VAL A 293 GLY A 298 5 ? 6 HELX_P HELX_P5 5 ASP A 134 ? SER A 162 ? ASP A 309 SER A 337 1 ? 29 HELX_P HELX_P6 6 PHE A 176 ? LYS A 180 ? PHE A 351 LYS A 355 5 ? 5 HELX_P HELX_P7 7 ASN A 196 ? ASN A 204 ? ASN A 371 ASN A 379 1 ? 9 HELX_P HELX_P8 8 ASN A 205 ? GLN A 228 ? ASN A 380 GLN A 403 1 ? 24 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A GLN 211 C ? ? ? 1_555 A MSE 212 N ? ? A GLN 386 A MSE 387 1_555 ? ? ? ? ? ? ? 1.327 ? covale2 covale ? ? A MSE 212 C ? ? ? 1_555 A ALA 213 N ? ? A MSE 387 A ALA 388 1_555 ? ? ? ? ? ? ? 1.330 ? covale3 covale ? ? A ILE 230 C ? ? ? 1_555 A MSE 231 N ? ? A ILE 405 A MSE 406 1_555 ? ? ? ? ? ? ? 1.326 ? covale4 covale ? ? A MSE 231 C ? ? ? 1_555 A GLN 232 N ? ? A MSE 406 A GLN 407 1_555 ? ? ? ? ? ? ? 1.329 ? metalc1 metalc ? ? A ASP 84 OD1 ? ? ? 1_555 B ZN . ZN ? ? A ASP 259 A ZN 1 1_555 ? ? ? ? ? ? ? 2.133 ? metalc2 metalc ? ? A HIS 13 NE2 ? ? ? 1_555 B ZN . ZN ? ? A HIS 188 A ZN 1 1_555 ? ? ? ? ? ? ? 2.159 ? metalc3 metalc ? ? A HIS 82 ND1 ? ? ? 1_555 B ZN . ZN ? ? A HIS 257 A ZN 1 1_555 ? ? ? ? ? ? ? 2.180 ? metalc4 metalc ? ? A GLU 115 OE2 ? ? ? 1_555 B ZN . ZN ? ? A GLU 290 A ZN 1 1_555 ? ? ? ? ? ? ? 2.198 ? metalc5 metalc ? ? A GLU 28 OE2 ? ? ? 1_555 B ZN . ZN ? ? A GLU 203 A ZN 1 1_555 ? ? ? ? ? ? ? 2.215 ? metalc6 metalc ? ? A ASP 84 OD2 ? ? ? 1_555 B ZN . ZN ? ? A ASP 259 A ZN 1 1_555 ? ? ? ? ? ? ? 2.587 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? anti-parallel A 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 49 ? LEU A 53 ? THR A 224 LEU A 228 A 2 PHE A 5 ? PRO A 11 ? PHE A 180 PRO A 186 A 3 LEU A 77 ? HIS A 82 ? LEU A 252 HIS A 257 A 4 SER A 186 ? GLU A 190 ? SER A 361 GLU A 365 A 5 ALA A 94 ? ILE A 99 ? ALA A 269 ILE A 274 A 6 LEU A 166 ? ALA A 174 ? LEU A 341 ALA A 349 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 50 ? O ILE A 225 N PHE A 5 ? N PHE A 180 A 2 3 N ASP A 10 ? N ASP A 185 O ILE A 79 ? O ILE A 254 A 3 4 N SER A 80 ? N SER A 255 O ILE A 189 ? O ILE A 364 A 4 5 O LEU A 188 ? O LEU A 363 N TYR A 97 ? N TYR A 272 A 5 6 N VAL A 96 ? N VAL A 271 O PRO A 170 ? O PRO A 345 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE ZN A 1' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE ACT A 410' AC3 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE ACT A 2' AC4 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE ACT A 3' AC5 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE FMT A 411' AC6 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE GOL A 412' AC7 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE GOL A 413' AC8 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE GOL A 414' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 HIS A 13 ? HIS A 188 . ? 1_555 ? 2 AC1 5 GLU A 28 ? GLU A 203 . ? 1_555 ? 3 AC1 5 HIS A 82 ? HIS A 257 . ? 1_555 ? 4 AC1 5 ASP A 84 ? ASP A 259 . ? 1_555 ? 5 AC1 5 GLU A 115 ? GLU A 290 . ? 1_555 ? 6 AC2 6 HOH J . ? HOH A 51 . ? 1_555 ? 7 AC2 6 HOH J . ? HOH A 98 . ? 1_555 ? 8 AC2 6 SER A 162 ? SER A 337 . ? 1_555 ? 9 AC2 6 ALA A 214 ? ALA A 389 . ? 1_555 ? 10 AC2 6 SER A 215 ? SER A 390 . ? 1_555 ? 11 AC2 6 TYR A 218 ? TYR A 393 . ? 1_555 ? 12 AC3 8 HOH J . ? HOH A 74 . ? 1_555 ? 13 AC3 8 HOH J . ? HOH A 79 . ? 1_555 ? 14 AC3 8 HOH J . ? HOH A 112 . ? 4_557 ? 15 AC3 8 HOH J . ? HOH A 136 . ? 1_555 ? 16 AC3 8 SER A 64 ? SER A 239 . ? 1_555 ? 17 AC3 8 GLU A 65 ? GLU A 240 . ? 1_555 ? 18 AC3 8 GLU A 127 ? GLU A 302 . ? 1_555 ? 19 AC3 8 HOH J . ? HOH A 450 . ? 1_555 ? 20 AC4 5 HOH J . ? HOH A 130 . ? 3_555 ? 21 AC4 5 ARG A 6 ? ARG A 181 . ? 1_555 ? 22 AC4 5 PHE A 73 ? PHE A 248 . ? 1_555 ? 23 AC4 5 LYS A 197 ? LYS A 372 . ? 3_555 ? 24 AC4 5 HOH J . ? HOH A 467 . ? 1_555 ? 25 AC5 4 HOH J . ? HOH A 82 . ? 1_555 ? 26 AC5 4 HOH J . ? HOH A 109 . ? 1_555 ? 27 AC5 4 GLU A 42 ? GLU A 217 . ? 1_555 ? 28 AC5 4 ARG A 221 ? ARG A 396 . ? 1_555 ? 29 AC6 7 HOH J . ? HOH A 8 . ? 1_555 ? 30 AC6 7 ARG A 141 ? ARG A 316 . ? 1_555 ? 31 AC6 7 HIS A 145 ? HIS A 320 . ? 1_555 ? 32 AC6 7 LEU A 179 ? LEU A 354 . ? 1_555 ? 33 AC6 7 LYS A 180 ? LYS A 355 . ? 1_555 ? 34 AC6 7 ALA A 181 ? ALA A 356 . ? 1_555 ? 35 AC6 7 MSE A 231 ? MSE A 406 . ? 2_656 ? 36 AC7 7 HOH J . ? HOH A 46 . ? 1_555 ? 37 AC7 7 HOH J . ? HOH A 92 . ? 2_656 ? 38 AC7 7 HOH J . ? HOH A 140 . ? 1_555 ? 39 AC7 7 ASN A 150 ? ASN A 325 . ? 1_555 ? 40 AC7 7 GLN A 222 ? GLN A 397 . ? 1_555 ? 41 AC7 7 PHE A 223 ? PHE A 398 . ? 1_555 ? 42 AC7 7 HOH J . ? HOH A 479 . ? 1_555 ? 43 AC8 6 THR A 140 ? THR A 315 . ? 1_555 ? 44 AC8 6 GLU A 143 ? GLU A 318 . ? 1_555 ? 45 AC8 6 THR A 144 ? THR A 319 . ? 1_555 ? 46 AC8 6 ASP A 183 ? ASP A 358 . ? 1_555 ? 47 AC8 6 PRO A 185 ? PRO A 360 . ? 1_555 ? 48 AC8 6 HOH J . ? HOH A 482 . ? 2_656 ? # _database_PDB_matrix.entry_id 3NE8 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3NE8 _atom_sites.fract_transf_matrix[1][1] 0.014048 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000112 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018688 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017096 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 176 ? ? ? A . n A 1 2 ASN 2 177 ? ? ? A . n A 1 3 ALA 3 178 178 ALA ALA A . n A 1 4 SER 4 179 179 SER SER A . n A 1 5 PHE 5 180 180 PHE PHE A . n A 1 6 ARG 6 181 181 ARG ARG A . n A 1 7 VAL 7 182 182 VAL VAL A . n A 1 8 VAL 8 183 183 VAL VAL A . n A 1 9 LEU 9 184 184 LEU LEU A . n A 1 10 ASP 10 185 185 ASP ASP A . n A 1 11 PRO 11 186 186 PRO PRO A . n A 1 12 GLY 12 187 187 GLY GLY A . n A 1 13 HIS 13 188 188 HIS HIS A . n A 1 14 GLY 14 189 189 GLY GLY A . n A 1 15 GLY 15 190 190 GLY GLY A . n A 1 16 ILE 16 191 191 ILE ILE A . n A 1 17 ASP 17 192 192 ASP ASP A . n A 1 18 GLY 18 193 193 GLY GLY A . n A 1 19 GLY 19 194 194 GLY GLY A . n A 1 20 ALA 20 195 195 ALA ALA A . n A 1 21 ARG 21 196 196 ARG ARG A . n A 1 22 GLY 22 197 197 GLY GLY A . n A 1 23 VAL 23 198 198 VAL VAL A . n A 1 24 THR 24 199 199 THR THR A . n A 1 25 GLY 25 200 200 GLY GLY A . n A 1 26 ILE 26 201 201 ILE ILE A . n A 1 27 LEU 27 202 202 LEU LEU A . n A 1 28 GLU 28 203 203 GLU GLU A . n A 1 29 LYS 29 204 204 LYS LYS A . n A 1 30 ASP 30 205 205 ASP ASP A . n A 1 31 VAL 31 206 206 VAL VAL A . n A 1 32 THR 32 207 207 THR THR A . n A 1 33 LEU 33 208 208 LEU LEU A . n A 1 34 ALA 34 209 209 ALA ALA A . n A 1 35 PHE 35 210 210 PHE PHE A . n A 1 36 ALA 36 211 211 ALA ALA A . n A 1 37 ARG 37 212 212 ARG ARG A . n A 1 38 ALA 38 213 213 ALA ALA A . n A 1 39 LEU 39 214 214 LEU LEU A . n A 1 40 ARG 40 215 215 ARG ARG A . n A 1 41 ASP 41 216 216 ASP ASP A . n A 1 42 GLU 42 217 217 GLU GLU A . n A 1 43 LEU 43 218 218 LEU LEU A . n A 1 44 GLN 44 219 219 GLN GLN A . n A 1 45 LYS 45 220 220 LYS LYS A . n A 1 46 GLY 46 221 221 GLY GLY A . n A 1 47 SER 47 222 222 SER SER A . n A 1 48 HIS 48 223 223 HIS HIS A . n A 1 49 THR 49 224 224 THR THR A . n A 1 50 ILE 50 225 225 ILE ILE A . n A 1 51 VAL 51 226 226 VAL VAL A . n A 1 52 ALA 52 227 227 ALA ALA A . n A 1 53 LEU 53 228 228 LEU LEU A . n A 1 54 THR 54 229 229 THR THR A . n A 1 55 ARG 55 230 230 ARG ARG A . n A 1 56 ASP 56 231 231 ASP ASP A . n A 1 57 SER 57 232 232 SER SER A . n A 1 58 ASP 58 233 233 ASP ASP A . n A 1 59 ILE 59 234 234 ILE ILE A . n A 1 60 PHE 60 235 235 PHE PHE A . n A 1 61 LEU 61 236 236 LEU LEU A . n A 1 62 ARG 62 237 237 ARG ARG A . n A 1 63 LEU 63 238 238 LEU LEU A . n A 1 64 SER 64 239 239 SER SER A . n A 1 65 GLU 65 240 240 GLU GLU A . n A 1 66 ARG 66 241 241 ARG ARG A . n A 1 67 VAL 67 242 242 VAL VAL A . n A 1 68 LYS 68 243 243 LYS LYS A . n A 1 69 LYS 69 244 244 LYS LYS A . n A 1 70 ALA 70 245 245 ALA ALA A . n A 1 71 GLN 71 246 246 GLN GLN A . n A 1 72 GLU 72 247 247 GLU GLU A . n A 1 73 PHE 73 248 248 PHE PHE A . n A 1 74 ASP 74 249 249 ASP ASP A . n A 1 75 ALA 75 250 250 ALA ALA A . n A 1 76 ASP 76 251 251 ASP ASP A . n A 1 77 LEU 77 252 252 LEU LEU A . n A 1 78 PHE 78 253 253 PHE PHE A . n A 1 79 ILE 79 254 254 ILE ILE A . n A 1 80 SER 80 255 255 SER SER A . n A 1 81 ILE 81 256 256 ILE ILE A . n A 1 82 HIS 82 257 257 HIS HIS A . n A 1 83 ALA 83 258 258 ALA ALA A . n A 1 84 ASP 84 259 259 ASP ASP A . n A 1 85 THR 85 260 260 THR THR A . n A 1 86 ILE 86 261 261 ILE ILE A . n A 1 87 ASP 87 262 262 ASP ASP A . n A 1 88 VAL 88 263 263 VAL VAL A . n A 1 89 HIS 89 264 264 HIS HIS A . n A 1 90 SER 90 265 265 SER SER A . n A 1 91 LEU 91 266 266 LEU LEU A . n A 1 92 ARG 92 267 267 ARG ARG A . n A 1 93 GLY 93 268 268 GLY GLY A . n A 1 94 ALA 94 269 269 ALA ALA A . n A 1 95 THR 95 270 270 THR THR A . n A 1 96 VAL 96 271 271 VAL VAL A . n A 1 97 TYR 97 272 272 TYR TYR A . n A 1 98 THR 98 273 273 THR THR A . n A 1 99 ILE 99 274 274 ILE ILE A . n A 1 100 SER 100 275 275 SER SER A . n A 1 101 ASP 101 276 276 ASP ASP A . n A 1 102 GLU 102 277 277 GLU GLU A . n A 1 103 ALA 103 278 278 ALA ALA A . n A 1 104 SER 104 279 279 SER SER A . n A 1 105 ASP 105 280 280 ASP ASP A . n A 1 106 ALA 106 281 281 ALA ALA A . n A 1 107 ILE 107 282 282 ILE ILE A . n A 1 108 ALA 108 283 283 ALA ALA A . n A 1 109 LYS 109 284 284 LYS LYS A . n A 1 110 SER 110 285 285 SER SER A . n A 1 111 LEU 111 286 286 LEU LEU A . n A 1 112 ALA 112 287 287 ALA ALA A . n A 1 113 GLU 113 288 288 GLU GLU A . n A 1 114 SER 114 289 289 SER SER A . n A 1 115 GLU 115 290 290 GLU GLU A . n A 1 116 ASN 116 291 291 ASN ASN A . n A 1 117 LYS 117 292 292 LYS LYS A . n A 1 118 VAL 118 293 293 VAL VAL A . n A 1 119 ASP 119 294 294 ASP ASP A . n A 1 120 LEU 120 295 295 LEU LEU A . n A 1 121 LEU 121 296 296 LEU LEU A . n A 1 122 ASP 122 297 297 ASP ASP A . n A 1 123 GLY 123 298 298 GLY GLY A . n A 1 124 LEU 124 299 299 LEU LEU A . n A 1 125 PRO 125 300 300 PRO PRO A . n A 1 126 LYS 126 301 301 LYS LYS A . n A 1 127 GLU 127 302 302 GLU GLU A . n A 1 128 GLU 128 303 ? ? ? A . n A 1 129 SER 129 304 ? ? ? A . n A 1 130 LEU 130 305 ? ? ? A . n A 1 131 GLU 131 306 ? ? ? A . n A 1 132 LEU 132 307 ? ? ? A . n A 1 133 THR 133 308 ? ? ? A . n A 1 134 ASP 134 309 309 ASP ASP A . n A 1 135 ILE 135 310 310 ILE ILE A . n A 1 136 LEU 136 311 311 LEU LEU A . n A 1 137 LEU 137 312 312 LEU LEU A . n A 1 138 ASP 138 313 313 ASP ASP A . n A 1 139 LEU 139 314 314 LEU LEU A . n A 1 140 THR 140 315 315 THR THR A . n A 1 141 ARG 141 316 316 ARG ARG A . n A 1 142 ARG 142 317 317 ARG ARG A . n A 1 143 GLU 143 318 318 GLU GLU A . n A 1 144 THR 144 319 319 THR THR A . n A 1 145 HIS 145 320 320 HIS HIS A . n A 1 146 ALA 146 321 321 ALA ALA A . n A 1 147 PHE 147 322 322 PHE PHE A . n A 1 148 SER 148 323 323 SER SER A . n A 1 149 ILE 149 324 324 ILE ILE A . n A 1 150 ASN 150 325 325 ASN ASN A . n A 1 151 PHE 151 326 326 PHE PHE A . n A 1 152 ALA 152 327 327 ALA ALA A . n A 1 153 ASN 153 328 328 ASN ASN A . n A 1 154 ASN 154 329 329 ASN ASN A . n A 1 155 VAL 155 330 330 VAL VAL A . n A 1 156 VAL 156 331 331 VAL VAL A . n A 1 157 SER 157 332 332 SER SER A . n A 1 158 ASN 158 333 333 ASN ASN A . n A 1 159 LEU 159 334 334 LEU LEU A . n A 1 160 SER 160 335 335 SER SER A . n A 1 161 LYS 161 336 336 LYS LYS A . n A 1 162 SER 162 337 337 SER SER A . n A 1 163 HIS 163 338 338 HIS HIS A . n A 1 164 ILE 164 339 339 ILE ILE A . n A 1 165 ASN 165 340 340 ASN ASN A . n A 1 166 LEU 166 341 341 LEU LEU A . n A 1 167 ILE 167 342 342 ILE ILE A . n A 1 168 ASN 168 343 343 ASN ASN A . n A 1 169 ASN 169 344 344 ASN ASN A . n A 1 170 PRO 170 345 345 PRO PRO A . n A 1 171 HIS 171 346 346 HIS HIS A . n A 1 172 ARG 172 347 347 ARG ARG A . n A 1 173 TYR 173 348 348 TYR TYR A . n A 1 174 ALA 174 349 349 ALA ALA A . n A 1 175 ASP 175 350 350 ASP ASP A . n A 1 176 PHE 176 351 351 PHE PHE A . n A 1 177 GLN 177 352 352 GLN GLN A . n A 1 178 VAL 178 353 353 VAL VAL A . n A 1 179 LEU 179 354 354 LEU LEU A . n A 1 180 LYS 180 355 355 LYS LYS A . n A 1 181 ALA 181 356 356 ALA ALA A . n A 1 182 PRO 182 357 357 PRO PRO A . n A 1 183 ASP 183 358 358 ASP ASP A . n A 1 184 VAL 184 359 359 VAL VAL A . n A 1 185 PRO 185 360 360 PRO PRO A . n A 1 186 SER 186 361 361 SER SER A . n A 1 187 VAL 187 362 362 VAL VAL A . n A 1 188 LEU 188 363 363 LEU LEU A . n A 1 189 ILE 189 364 364 ILE ILE A . n A 1 190 GLU 190 365 365 GLU GLU A . n A 1 191 ILE 191 366 366 ILE ILE A . n A 1 192 GLY 192 367 367 GLY GLY A . n A 1 193 TYR 193 368 368 TYR TYR A . n A 1 194 LEU 194 369 369 LEU LEU A . n A 1 195 SER 195 370 370 SER SER A . n A 1 196 ASN 196 371 371 ASN ASN A . n A 1 197 LYS 197 372 372 LYS LYS A . n A 1 198 GLU 198 373 373 GLU GLU A . n A 1 199 ASP 199 374 374 ASP ASP A . n A 1 200 GLU 200 375 375 GLU GLU A . n A 1 201 LYS 201 376 376 LYS LYS A . n A 1 202 LEU 202 377 377 LEU LEU A . n A 1 203 LEU 203 378 378 LEU LEU A . n A 1 204 ASN 204 379 379 ASN ASN A . n A 1 205 ASN 205 380 380 ASN ASN A . n A 1 206 PRO 206 381 381 PRO PRO A . n A 1 207 GLN 207 382 382 GLN GLN A . n A 1 208 TRP 208 383 383 TRP TRP A . n A 1 209 ARG 209 384 384 ARG ARG A . n A 1 210 LYS 210 385 385 LYS LYS A . n A 1 211 GLN 211 386 386 GLN GLN A . n A 1 212 MSE 212 387 387 MSE MSE A . n A 1 213 ALA 213 388 388 ALA ALA A . n A 1 214 ALA 214 389 389 ALA ALA A . n A 1 215 SER 215 390 390 SER SER A . n A 1 216 ILE 216 391 391 ILE ILE A . n A 1 217 ALA 217 392 392 ALA ALA A . n A 1 218 TYR 218 393 393 TYR TYR A . n A 1 219 SER 219 394 394 SER SER A . n A 1 220 ILE 220 395 395 ILE ILE A . n A 1 221 ARG 221 396 396 ARG ARG A . n A 1 222 GLN 222 397 397 GLN GLN A . n A 1 223 PHE 223 398 398 PHE PHE A . n A 1 224 ALA 224 399 399 ALA ALA A . n A 1 225 GLU 225 400 400 GLU GLU A . n A 1 226 TYR 226 401 401 TYR TYR A . n A 1 227 ARG 227 402 402 ARG ARG A . n A 1 228 GLN 228 403 403 GLN GLN A . n A 1 229 LYS 229 404 404 LYS LYS A . n A 1 230 ILE 230 405 405 ILE ILE A . n A 1 231 MSE 231 406 406 MSE MSE A . n A 1 232 GLN 232 407 407 GLN GLN A . n A 1 233 PRO 233 408 408 PRO PRO A . n A 1 234 LEU 234 409 409 LEU LEU A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 212 A MSE 387 ? MET SELENOMETHIONINE 2 A MSE 231 A MSE 406 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5390 ? 1 MORE -18 ? 1 'SSA (A^2)' 19130 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 70.7153770860 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 58.4931148027 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 84 ? A ASP 259 ? 1_555 ZN ? B ZN . ? A ZN 1 ? 1_555 NE2 ? A HIS 13 ? A HIS 188 ? 1_555 113.9 ? 2 OD1 ? A ASP 84 ? A ASP 259 ? 1_555 ZN ? B ZN . ? A ZN 1 ? 1_555 ND1 ? A HIS 82 ? A HIS 257 ? 1_555 146.5 ? 3 NE2 ? A HIS 13 ? A HIS 188 ? 1_555 ZN ? B ZN . ? A ZN 1 ? 1_555 ND1 ? A HIS 82 ? A HIS 257 ? 1_555 99.4 ? 4 OD1 ? A ASP 84 ? A ASP 259 ? 1_555 ZN ? B ZN . ? A ZN 1 ? 1_555 OE2 ? A GLU 115 ? A GLU 290 ? 1_555 86.8 ? 5 NE2 ? A HIS 13 ? A HIS 188 ? 1_555 ZN ? B ZN . ? A ZN 1 ? 1_555 OE2 ? A GLU 115 ? A GLU 290 ? 1_555 87.6 ? 6 ND1 ? A HIS 82 ? A HIS 257 ? 1_555 ZN ? B ZN . ? A ZN 1 ? 1_555 OE2 ? A GLU 115 ? A GLU 290 ? 1_555 90.9 ? 7 OD1 ? A ASP 84 ? A ASP 259 ? 1_555 ZN ? B ZN . ? A ZN 1 ? 1_555 OE2 ? A GLU 28 ? A GLU 203 ? 1_555 87.1 ? 8 NE2 ? A HIS 13 ? A HIS 188 ? 1_555 ZN ? B ZN . ? A ZN 1 ? 1_555 OE2 ? A GLU 28 ? A GLU 203 ? 1_555 88.1 ? 9 ND1 ? A HIS 82 ? A HIS 257 ? 1_555 ZN ? B ZN . ? A ZN 1 ? 1_555 OE2 ? A GLU 28 ? A GLU 203 ? 1_555 98.2 ? 10 OE2 ? A GLU 115 ? A GLU 290 ? 1_555 ZN ? B ZN . ? A ZN 1 ? 1_555 OE2 ? A GLU 28 ? A GLU 203 ? 1_555 170.5 ? 11 OD1 ? A ASP 84 ? A ASP 259 ? 1_555 ZN ? B ZN . ? A ZN 1 ? 1_555 OD2 ? A ASP 84 ? A ASP 259 ? 1_555 54.4 ? 12 NE2 ? A HIS 13 ? A HIS 188 ? 1_555 ZN ? B ZN . ? A ZN 1 ? 1_555 OD2 ? A ASP 84 ? A ASP 259 ? 1_555 168.0 ? 13 ND1 ? A HIS 82 ? A HIS 257 ? 1_555 ZN ? B ZN . ? A ZN 1 ? 1_555 OD2 ? A ASP 84 ? A ASP 259 ? 1_555 92.2 ? 14 OE2 ? A GLU 115 ? A GLU 290 ? 1_555 ZN ? B ZN . ? A ZN 1 ? 1_555 OD2 ? A ASP 84 ? A ASP 259 ? 1_555 89.0 ? 15 OE2 ? A GLU 28 ? A GLU 203 ? 1_555 ZN ? B ZN . ? A ZN 1 ? 1_555 OD2 ? A ASP 84 ? A ASP 259 ? 1_555 93.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-07-14 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-11-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 25.2425 _pdbx_refine_tls.origin_y 18.6636 _pdbx_refine_tls.origin_z 44.1104 _pdbx_refine_tls.T[1][1] 0.0826 _pdbx_refine_tls.T[2][2] 0.0785 _pdbx_refine_tls.T[3][3] 0.0884 _pdbx_refine_tls.T[1][2] -0.0081 _pdbx_refine_tls.T[1][3] -0.0045 _pdbx_refine_tls.T[2][3] -0.0053 _pdbx_refine_tls.L[1][1] 0.5258 _pdbx_refine_tls.L[2][2] 0.4285 _pdbx_refine_tls.L[3][3] 1.0646 _pdbx_refine_tls.L[1][2] 0.0183 _pdbx_refine_tls.L[1][3] -0.1306 _pdbx_refine_tls.L[2][3] -0.0820 _pdbx_refine_tls.S[1][1] -0.0241 _pdbx_refine_tls.S[1][2] 0.0201 _pdbx_refine_tls.S[1][3] 0.0132 _pdbx_refine_tls.S[2][1] -0.0571 _pdbx_refine_tls.S[2][2] 0.0223 _pdbx_refine_tls.S[2][3] 0.0082 _pdbx_refine_tls.S[3][1] 0.0319 _pdbx_refine_tls.S[3][2] -0.0549 _pdbx_refine_tls.S[3][3] 0.0010 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details 'chain A' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SBC-Collect 'data collection' . ? 1 SHELXD phasing . ? 2 MLPHARE phasing . ? 3 DM 'model building' . ? 4 ARP 'model building' . ? 5 WARP 'model building' . ? 6 HKL-3000 phasing . ? 7 PHENIX refinement '(phenix.refine: 1.5_2)' ? 8 HKL-3000 'data reduction' . ? 9 HKL-3000 'data scaling' . ? 10 DM phasing . ? 11 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 188 ? ? 67.36 -159.16 2 1 ALA A 258 ? ? -150.10 73.01 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 176 ? A SER 1 2 1 Y 1 A ASN 177 ? A ASN 2 3 1 Y 1 A GLU 303 ? A GLU 128 4 1 Y 1 A SER 304 ? A SER 129 5 1 Y 1 A LEU 305 ? A LEU 130 6 1 Y 1 A GLU 306 ? A GLU 131 7 1 Y 1 A LEU 307 ? A LEU 132 8 1 Y 1 A THR 308 ? A THR 133 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 'ACETATE ION' ACT 4 'FORMIC ACID' FMT 5 GLYCEROL GOL 6 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 1 1 ZN ZN A . C 3 ACT 1 410 1 ACT ACT A . D 3 ACT 1 2 2 ACT ACT A . E 3 ACT 1 3 3 ACT ACT A . F 4 FMT 1 411 1 FMT FMT A . G 5 GOL 1 412 1 GOL GOL A . H 5 GOL 1 413 2 GOL GOL A . I 5 GOL 1 414 3 GOL GOL A . J 6 HOH 1 4 4 HOH HOH A . J 6 HOH 2 5 5 HOH HOH A . J 6 HOH 3 6 6 HOH HOH A . J 6 HOH 4 7 7 HOH HOH A . J 6 HOH 5 8 8 HOH HOH A . J 6 HOH 6 9 9 HOH HOH A . J 6 HOH 7 10 10 HOH HOH A . J 6 HOH 8 11 11 HOH HOH A . J 6 HOH 9 12 12 HOH HOH A . J 6 HOH 10 13 13 HOH HOH A . J 6 HOH 11 14 14 HOH HOH A . J 6 HOH 12 15 15 HOH HOH A . J 6 HOH 13 16 16 HOH HOH A . J 6 HOH 14 17 17 HOH HOH A . J 6 HOH 15 18 18 HOH HOH A . J 6 HOH 16 19 19 HOH HOH A . J 6 HOH 17 20 20 HOH HOH A . J 6 HOH 18 21 21 HOH HOH A . J 6 HOH 19 22 22 HOH HOH A . J 6 HOH 20 23 23 HOH HOH A . J 6 HOH 21 24 24 HOH HOH A . J 6 HOH 22 25 25 HOH HOH A . J 6 HOH 23 26 26 HOH HOH A . J 6 HOH 24 27 27 HOH HOH A . J 6 HOH 25 28 28 HOH HOH A . J 6 HOH 26 29 29 HOH HOH A . J 6 HOH 27 30 30 HOH HOH A . J 6 HOH 28 31 31 HOH HOH A . J 6 HOH 29 32 32 HOH HOH A . J 6 HOH 30 33 33 HOH HOH A . J 6 HOH 31 34 34 HOH HOH A . J 6 HOH 32 35 35 HOH HOH A . J 6 HOH 33 36 36 HOH HOH A . J 6 HOH 34 37 37 HOH HOH A . J 6 HOH 35 38 38 HOH HOH A . J 6 HOH 36 39 39 HOH HOH A . J 6 HOH 37 40 40 HOH HOH A . J 6 HOH 38 41 41 HOH HOH A . J 6 HOH 39 42 42 HOH HOH A . J 6 HOH 40 43 43 HOH HOH A . J 6 HOH 41 44 44 HOH HOH A . J 6 HOH 42 45 45 HOH HOH A . J 6 HOH 43 46 46 HOH HOH A . J 6 HOH 44 47 47 HOH HOH A . J 6 HOH 45 48 48 HOH HOH A . J 6 HOH 46 49 49 HOH HOH A . J 6 HOH 47 50 50 HOH HOH A . J 6 HOH 48 51 51 HOH HOH A . J 6 HOH 49 52 52 HOH HOH A . J 6 HOH 50 53 53 HOH HOH A . J 6 HOH 51 54 54 HOH HOH A . J 6 HOH 52 55 55 HOH HOH A . J 6 HOH 53 56 56 HOH HOH A . J 6 HOH 54 57 57 HOH HOH A . J 6 HOH 55 58 58 HOH HOH A . J 6 HOH 56 59 59 HOH HOH A . J 6 HOH 57 60 60 HOH HOH A . J 6 HOH 58 61 61 HOH HOH A . J 6 HOH 59 62 62 HOH HOH A . J 6 HOH 60 63 63 HOH HOH A . J 6 HOH 61 64 64 HOH HOH A . J 6 HOH 62 65 65 HOH HOH A . J 6 HOH 63 66 66 HOH HOH A . J 6 HOH 64 67 67 HOH HOH A . J 6 HOH 65 68 68 HOH HOH A . J 6 HOH 66 69 69 HOH HOH A . J 6 HOH 67 70 70 HOH HOH A . J 6 HOH 68 71 71 HOH HOH A . J 6 HOH 69 72 72 HOH HOH A . J 6 HOH 70 73 73 HOH HOH A . J 6 HOH 71 74 74 HOH HOH A . J 6 HOH 72 75 75 HOH HOH A . J 6 HOH 73 76 76 HOH HOH A . J 6 HOH 74 77 77 HOH HOH A . J 6 HOH 75 78 78 HOH HOH A . J 6 HOH 76 79 79 HOH HOH A . J 6 HOH 77 80 80 HOH HOH A . J 6 HOH 78 81 81 HOH HOH A . J 6 HOH 79 82 82 HOH HOH A . J 6 HOH 80 83 83 HOH HOH A . J 6 HOH 81 84 84 HOH HOH A . J 6 HOH 82 85 85 HOH HOH A . J 6 HOH 83 86 86 HOH HOH A . J 6 HOH 84 87 87 HOH HOH A . J 6 HOH 85 88 88 HOH HOH A . J 6 HOH 86 89 89 HOH HOH A . J 6 HOH 87 90 90 HOH HOH A . J 6 HOH 88 91 91 HOH HOH A . J 6 HOH 89 92 92 HOH HOH A . J 6 HOH 90 93 93 HOH HOH A . J 6 HOH 91 94 94 HOH HOH A . J 6 HOH 92 95 95 HOH HOH A . J 6 HOH 93 96 96 HOH HOH A . J 6 HOH 94 97 97 HOH HOH A . J 6 HOH 95 98 98 HOH HOH A . J 6 HOH 96 99 99 HOH HOH A . J 6 HOH 97 100 100 HOH HOH A . J 6 HOH 98 101 101 HOH HOH A . J 6 HOH 99 102 102 HOH HOH A . J 6 HOH 100 103 103 HOH HOH A . J 6 HOH 101 104 104 HOH HOH A . J 6 HOH 102 105 105 HOH HOH A . J 6 HOH 103 106 106 HOH HOH A . J 6 HOH 104 107 107 HOH HOH A . J 6 HOH 105 108 108 HOH HOH A . J 6 HOH 106 109 109 HOH HOH A . J 6 HOH 107 110 110 HOH HOH A . J 6 HOH 108 111 111 HOH HOH A . J 6 HOH 109 112 112 HOH HOH A . J 6 HOH 110 113 113 HOH HOH A . J 6 HOH 111 114 114 HOH HOH A . J 6 HOH 112 115 115 HOH HOH A . J 6 HOH 113 116 116 HOH HOH A . J 6 HOH 114 117 117 HOH HOH A . J 6 HOH 115 118 118 HOH HOH A . J 6 HOH 116 119 119 HOH HOH A . J 6 HOH 117 120 120 HOH HOH A . J 6 HOH 118 121 121 HOH HOH A . J 6 HOH 119 122 122 HOH HOH A . J 6 HOH 120 123 123 HOH HOH A . J 6 HOH 121 124 124 HOH HOH A . J 6 HOH 122 125 125 HOH HOH A . J 6 HOH 123 126 126 HOH HOH A . J 6 HOH 124 127 127 HOH HOH A . J 6 HOH 125 128 128 HOH HOH A . J 6 HOH 126 129 129 HOH HOH A . J 6 HOH 127 130 130 HOH HOH A . J 6 HOH 128 131 131 HOH HOH A . J 6 HOH 129 132 132 HOH HOH A . J 6 HOH 130 133 133 HOH HOH A . J 6 HOH 131 134 134 HOH HOH A . J 6 HOH 132 135 135 HOH HOH A . J 6 HOH 133 136 136 HOH HOH A . J 6 HOH 134 137 137 HOH HOH A . J 6 HOH 135 138 138 HOH HOH A . J 6 HOH 136 139 139 HOH HOH A . J 6 HOH 137 140 140 HOH HOH A . J 6 HOH 138 141 141 HOH HOH A . J 6 HOH 139 142 142 HOH HOH A . J 6 HOH 140 143 143 HOH HOH A . J 6 HOH 141 144 144 HOH HOH A . J 6 HOH 142 145 145 HOH HOH A . J 6 HOH 143 146 146 HOH HOH A . J 6 HOH 144 147 147 HOH HOH A . J 6 HOH 145 148 148 HOH HOH A . J 6 HOH 146 149 149 HOH HOH A . J 6 HOH 147 150 150 HOH HOH A . J 6 HOH 148 151 151 HOH HOH A . J 6 HOH 149 152 152 HOH HOH A . J 6 HOH 150 153 153 HOH HOH A . J 6 HOH 151 154 154 HOH HOH A . J 6 HOH 152 155 155 HOH HOH A . J 6 HOH 153 156 156 HOH HOH A . J 6 HOH 154 157 157 HOH HOH A . J 6 HOH 155 158 158 HOH HOH A . J 6 HOH 156 159 159 HOH HOH A . J 6 HOH 157 160 160 HOH HOH A . J 6 HOH 158 161 161 HOH HOH A . J 6 HOH 159 162 162 HOH HOH A . J 6 HOH 160 163 163 HOH HOH A . J 6 HOH 161 164 164 HOH HOH A . J 6 HOH 162 165 165 HOH HOH A . J 6 HOH 163 166 166 HOH HOH A . J 6 HOH 164 167 167 HOH HOH A . J 6 HOH 165 168 168 HOH HOH A . J 6 HOH 166 169 169 HOH HOH A . J 6 HOH 167 170 170 HOH HOH A . J 6 HOH 168 171 171 HOH HOH A . J 6 HOH 169 172 172 HOH HOH A . J 6 HOH 170 173 173 HOH HOH A . J 6 HOH 171 174 174 HOH HOH A . J 6 HOH 172 175 175 HOH HOH A . J 6 HOH 173 415 1 HOH HOH A . J 6 HOH 174 416 2 HOH HOH A . J 6 HOH 175 417 3 HOH HOH A . J 6 HOH 176 418 176 HOH HOH A . J 6 HOH 177 419 177 HOH HOH A . J 6 HOH 178 420 178 HOH HOH A . J 6 HOH 179 421 179 HOH HOH A . J 6 HOH 180 422 180 HOH HOH A . J 6 HOH 181 423 181 HOH HOH A . J 6 HOH 182 424 182 HOH HOH A . J 6 HOH 183 425 183 HOH HOH A . J 6 HOH 184 426 184 HOH HOH A . J 6 HOH 185 427 185 HOH HOH A . J 6 HOH 186 428 186 HOH HOH A . J 6 HOH 187 429 187 HOH HOH A . J 6 HOH 188 430 188 HOH HOH A . J 6 HOH 189 431 189 HOH HOH A . J 6 HOH 190 432 190 HOH HOH A . J 6 HOH 191 433 191 HOH HOH A . J 6 HOH 192 434 192 HOH HOH A . J 6 HOH 193 435 193 HOH HOH A . J 6 HOH 194 436 194 HOH HOH A . J 6 HOH 195 437 195 HOH HOH A . J 6 HOH 196 438 196 HOH HOH A . J 6 HOH 197 439 197 HOH HOH A . J 6 HOH 198 440 198 HOH HOH A . J 6 HOH 199 441 199 HOH HOH A . J 6 HOH 200 442 200 HOH HOH A . J 6 HOH 201 443 201 HOH HOH A . J 6 HOH 202 444 202 HOH HOH A . J 6 HOH 203 445 203 HOH HOH A . J 6 HOH 204 446 204 HOH HOH A . J 6 HOH 205 447 205 HOH HOH A . J 6 HOH 206 448 206 HOH HOH A . J 6 HOH 207 449 207 HOH HOH A . J 6 HOH 208 450 208 HOH HOH A . J 6 HOH 209 451 209 HOH HOH A . J 6 HOH 210 452 210 HOH HOH A . J 6 HOH 211 453 211 HOH HOH A . J 6 HOH 212 454 212 HOH HOH A . J 6 HOH 213 455 213 HOH HOH A . J 6 HOH 214 456 214 HOH HOH A . J 6 HOH 215 457 215 HOH HOH A . J 6 HOH 216 458 216 HOH HOH A . J 6 HOH 217 459 217 HOH HOH A . J 6 HOH 218 460 218 HOH HOH A . J 6 HOH 219 461 219 HOH HOH A . J 6 HOH 220 462 220 HOH HOH A . J 6 HOH 221 463 221 HOH HOH A . J 6 HOH 222 464 222 HOH HOH A . J 6 HOH 223 465 223 HOH HOH A . J 6 HOH 224 466 224 HOH HOH A . J 6 HOH 225 467 225 HOH HOH A . J 6 HOH 226 468 226 HOH HOH A . J 6 HOH 227 469 227 HOH HOH A . J 6 HOH 228 470 228 HOH HOH A . J 6 HOH 229 471 229 HOH HOH A . J 6 HOH 230 472 230 HOH HOH A . J 6 HOH 231 473 231 HOH HOH A . J 6 HOH 232 474 232 HOH HOH A . J 6 HOH 233 475 233 HOH HOH A . J 6 HOH 234 476 234 HOH HOH A . J 6 HOH 235 477 235 HOH HOH A . J 6 HOH 236 478 236 HOH HOH A . J 6 HOH 237 479 237 HOH HOH A . J 6 HOH 238 480 238 HOH HOH A . J 6 HOH 239 481 239 HOH HOH A . J 6 HOH 240 482 240 HOH HOH A . J 6 HOH 241 483 241 HOH HOH A . J 6 HOH 242 484 242 HOH HOH A . J 6 HOH 243 485 243 HOH HOH A . J 6 HOH 244 486 244 HOH HOH A . J 6 HOH 245 487 245 HOH HOH A . J 6 HOH 246 488 246 HOH HOH A . J 6 HOH 247 489 247 HOH HOH A . J 6 HOH 248 490 248 HOH HOH A . J 6 HOH 249 491 249 HOH HOH A . J 6 HOH 250 492 250 HOH HOH A . J 6 HOH 251 493 251 HOH HOH A . J 6 HOH 252 494 252 HOH HOH A . J 6 HOH 253 495 253 HOH HOH A . J 6 HOH 254 496 254 HOH HOH A . J 6 HOH 255 497 255 HOH HOH A . J 6 HOH 256 498 256 HOH HOH A . #