data_3NG5 # _entry.id 3NG5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3NG5 pdb_00003ng5 10.2210/pdb3ng5/pdb RCSB RCSB059786 ? ? WWPDB D_1000059786 ? ? # _pdbx_database_status.entry_id 3NG5 _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2010-06-11 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Miyata, M.' 1 'Nakamura, T.' 2 'Ikemizu, S.' 3 'Chirifu, M.' 4 'Yamagata, Y.' 5 'Kai, H.' 6 # _citation.id primary _citation.title ;Crystal structure of green tea polyphenol(-)-epigallocatechin gallate (EGCG)-transthyretin complex reveals novel binding site distinct from thyroxine binding site ; _citation.journal_abbrev Biochemistry _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year 2010 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20565072 _citation.pdbx_database_id_DOI 10.1021/bi1004409 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Miyata, M.' 1 ? primary 'Sato, T.' 2 ? primary 'Kugimiya, M.' 3 ? primary 'Sho, M.' 4 ? primary 'Nakamura, T.' 5 ? primary 'Ikemizu, S.' 6 ? primary 'Chirifu, M.' 7 ? primary 'Mizuguchi, M.' 8 ? primary 'Nabeshima, Y.' 9 ? primary 'Suwa, Y.' 10 ? primary 'Morioka, H.' 11 ? primary 'Arimori, T.' 12 ? primary 'Suico, M.A.' 13 ? primary 'Shuto, T.' 14 ? primary 'Sako, Y.' 15 ? primary 'Momohara, M.' 16 ? primary 'Koga, T.' 17 ? primary 'Morino-Koga, S.' 18 ? primary 'Yamagata, Y.' 19 ? primary 'Kai, H.' 20 ? # _cell.length_a 86.074 _cell.length_b 44.189 _cell.length_c 65.141 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3NG5 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.entry_id 3NG5 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 18 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Transthyretin 13809.426 2 ? V30M ? ? 2 non-polymer syn '(2R,3R)-5,7-dihydroxy-2-(3,4,5-trihydroxyphenyl)-3,4-dihydro-2H-chromen-3-yl 3,4,5-trihydroxybenzoate' 458.372 3 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 water nat water 18.015 161 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Prealbumin, TBPA, TTR, ATTR' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPTGTGESKCPLMVKVLDAVRGSPAINVAMHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSYWK ALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYSTTAVVTNPKE ; _entity_poly.pdbx_seq_one_letter_code_can ;GPTGTGESKCPLMVKVLDAVRGSPAINVAMHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSYWK ALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYSTTAVVTNPKE ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 THR n 1 4 GLY n 1 5 THR n 1 6 GLY n 1 7 GLU n 1 8 SER n 1 9 LYS n 1 10 CYS n 1 11 PRO n 1 12 LEU n 1 13 MET n 1 14 VAL n 1 15 LYS n 1 16 VAL n 1 17 LEU n 1 18 ASP n 1 19 ALA n 1 20 VAL n 1 21 ARG n 1 22 GLY n 1 23 SER n 1 24 PRO n 1 25 ALA n 1 26 ILE n 1 27 ASN n 1 28 VAL n 1 29 ALA n 1 30 MET n 1 31 HIS n 1 32 VAL n 1 33 PHE n 1 34 ARG n 1 35 LYS n 1 36 ALA n 1 37 ALA n 1 38 ASP n 1 39 ASP n 1 40 THR n 1 41 TRP n 1 42 GLU n 1 43 PRO n 1 44 PHE n 1 45 ALA n 1 46 SER n 1 47 GLY n 1 48 LYS n 1 49 THR n 1 50 SER n 1 51 GLU n 1 52 SER n 1 53 GLY n 1 54 GLU n 1 55 LEU n 1 56 HIS n 1 57 GLY n 1 58 LEU n 1 59 THR n 1 60 THR n 1 61 GLU n 1 62 GLU n 1 63 GLU n 1 64 PHE n 1 65 VAL n 1 66 GLU n 1 67 GLY n 1 68 ILE n 1 69 TYR n 1 70 LYS n 1 71 VAL n 1 72 GLU n 1 73 ILE n 1 74 ASP n 1 75 THR n 1 76 LYS n 1 77 SER n 1 78 TYR n 1 79 TRP n 1 80 LYS n 1 81 ALA n 1 82 LEU n 1 83 GLY n 1 84 ILE n 1 85 SER n 1 86 PRO n 1 87 PHE n 1 88 HIS n 1 89 GLU n 1 90 HIS n 1 91 ALA n 1 92 GLU n 1 93 VAL n 1 94 VAL n 1 95 PHE n 1 96 THR n 1 97 ALA n 1 98 ASN n 1 99 ASP n 1 100 SER n 1 101 GLY n 1 102 PRO n 1 103 ARG n 1 104 ARG n 1 105 TYR n 1 106 THR n 1 107 ILE n 1 108 ALA n 1 109 ALA n 1 110 LEU n 1 111 LEU n 1 112 SER n 1 113 PRO n 1 114 TYR n 1 115 SER n 1 116 TYR n 1 117 SER n 1 118 THR n 1 119 THR n 1 120 ALA n 1 121 VAL n 1 122 VAL n 1 123 THR n 1 124 ASN n 1 125 PRO n 1 126 LYS n 1 127 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PALB, TTR' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'PET22(+)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TTHY_HUMAN _struct_ref.pdbx_db_accession P02766 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GPTGTGESKCPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSYWK ALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYSTTAVVTNPKE ; _struct_ref.pdbx_align_begin 21 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3NG5 A 1 ? 127 ? P02766 21 ? 147 ? 1 127 2 1 3NG5 B 1 ? 127 ? P02766 21 ? 147 ? 1 127 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3NG5 MET A 30 ? UNP P02766 VAL 50 'engineered mutation' 30 1 2 3NG5 MET B 30 ? UNP P02766 VAL 50 'engineered mutation' 30 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 KDH non-polymer . '(2R,3R)-5,7-dihydroxy-2-(3,4,5-trihydroxyphenyl)-3,4-dihydro-2H-chromen-3-yl 3,4,5-trihydroxybenzoate' '(-)-Epigallocatechin-3-gallate; EGCG' 'C22 H18 O11' 458.372 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3NG5 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.24 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 45.16 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method EVAPORATION _exptl_crystal_grow.pH 5.3 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details '200MM CITRATE, 3M AMMONIUM SULFATE, pH 5.3, EVAPORATION, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2008-12-16 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Numerical link type Si(111)' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE AR-NW12A' _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline AR-NW12A # _reflns.entry_id 3NG5 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 1.7 _reflns.d_resolution_low 50 _reflns.number_all ? _reflns.number_obs 28169 _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.065 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 75.2 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.7 _reflns_shell.d_res_low 1.79 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs 0.423 _reflns_shell.meanI_over_sigI_obs 6.8 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy ? _reflns_shell.number_unique_all 2767 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3NG5 _refine.ls_d_res_high 1.70 _refine.ls_d_res_low 33.657 _refine.pdbx_ls_sigma_F 1.54 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.140 _refine.ls_number_reflns_obs 28057 _refine.ls_number_reflns_all 28057 _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all 0.188 _refine.ls_R_factor_obs 0.188 _refine.ls_R_factor_R_work 0.186 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.227 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.780 _refine.ls_number_reflns_R_free 1342 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 37.751 _refine.solvent_model_param_bsol 62.313 _refine.solvent_model_param_ksol 0.371 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 5.373 _refine.aniso_B[2][2] -5.543 _refine.aniso_B[3][3] 0.170 _refine.aniso_B[1][2] -0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.260 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.110 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.900 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB ENTRY 1BMZ' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.843 _refine.B_iso_max 147.53 _refine.B_iso_min 10.80 _refine.occupancy_max 1.00 _refine.occupancy_min 0.00 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1805 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 105 _refine_hist.number_atoms_solvent 161 _refine_hist.number_atoms_total 2071 _refine_hist.d_res_high 1.70 _refine_hist.d_res_low 33.657 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 1983 0.009 ? ? 'X-RAY DIFFRACTION' ? f_angle_d 2718 1.277 ? ? 'X-RAY DIFFRACTION' ? f_chiral_restr 293 0.084 ? ? 'X-RAY DIFFRACTION' ? f_plane_restr 339 0.008 ? ? 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 686 22.211 ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.redundancy_reflns_obs 1.695 1.756 10 95.000 2525 . 0.240 0.326 . 114 . 2639 . 'X-RAY DIFFRACTION' . 1.756 1.826 10 100.000 2644 . 0.229 0.277 . 127 . 2771 . 'X-RAY DIFFRACTION' . 1.826 1.909 10 100.000 2659 . 0.213 0.281 . 126 . 2785 . 'X-RAY DIFFRACTION' . 1.909 2.010 10 100.000 2652 . 0.200 0.265 . 130 . 2782 . 'X-RAY DIFFRACTION' . 2.010 2.136 10 100.000 2658 . 0.198 0.255 . 134 . 2792 . 'X-RAY DIFFRACTION' . 2.136 2.300 10 100.000 2672 . 0.189 0.234 . 138 . 2810 . 'X-RAY DIFFRACTION' . 2.300 2.532 10 100.000 2657 . 0.194 0.266 . 158 . 2815 . 'X-RAY DIFFRACTION' . 2.532 2.898 10 100.000 2704 . 0.186 0.223 . 142 . 2846 . 'X-RAY DIFFRACTION' . 2.898 3.651 10 100.000 2727 . 0.162 0.196 . 145 . 2872 . 'X-RAY DIFFRACTION' . 3.651 33.664 10 98.000 2817 . 0.172 0.188 . 128 . 2945 . 'X-RAY DIFFRACTION' . # _struct.entry_id 3NG5 _struct.title 'Crystal Structure of V30M transthyretin complexed with (-)-epigallocatechin gallate (EGCG)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3NG5 _struct_keywords.text 'RETINOL-BINDING, SECRETED, THYROID HORMONE, TRANSPORT, VITAMIN A, TRANSPORT PROTEIN, THYROXINE' _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 2 ? G N N 4 ? H N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 74 ? LEU A 82 ? ASP A 74 LEU A 82 1 ? 9 HELX_P HELX_P2 2 ASP B 74 ? LEU B 82 ? ASP B 74 LEU B 82 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 8 ? C ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? parallel A 7 8 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? parallel B 7 8 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel C 6 7 ? anti-parallel C 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 23 ? PRO A 24 ? SER A 23 PRO A 24 A 2 LEU A 12 ? ASP A 18 ? LEU A 12 ASP A 18 A 3 ARG A 104 ? SER A 112 ? ARG A 104 SER A 112 A 4 SER A 115 ? THR A 123 ? SER A 115 THR A 123 A 5 SER B 115 ? THR B 123 ? SER B 115 THR B 123 A 6 ARG B 104 ? SER B 112 ? ARG B 104 SER B 112 A 7 LEU B 12 ? ASP B 18 ? LEU B 12 ASP B 18 A 8 SER B 23 ? PRO B 24 ? SER B 23 PRO B 24 B 1 GLU A 54 ? LEU A 55 ? GLU A 54 LEU A 55 B 2 LEU A 12 ? ASP A 18 ? LEU A 12 ASP A 18 B 3 ARG A 104 ? SER A 112 ? ARG A 104 SER A 112 B 4 SER A 115 ? THR A 123 ? SER A 115 THR A 123 B 5 SER B 115 ? THR B 123 ? SER B 115 THR B 123 B 6 ARG B 104 ? SER B 112 ? ARG B 104 SER B 112 B 7 LEU B 12 ? ASP B 18 ? LEU B 12 ASP B 18 B 8 GLU B 54 ? LEU B 55 ? GLU B 54 LEU B 55 C 1 TRP A 41 ? LYS A 48 ? TRP A 41 LYS A 48 C 2 ALA A 29 ? LYS A 35 ? ALA A 29 LYS A 35 C 3 GLY A 67 ? ILE A 73 ? GLY A 67 ILE A 73 C 4 HIS A 88 ? ALA A 97 ? HIS A 88 ALA A 97 C 5 HIS B 88 ? ALA B 97 ? HIS B 88 ALA B 97 C 6 GLY B 67 ? ILE B 73 ? GLY B 67 ILE B 73 C 7 ALA B 29 ? LYS B 35 ? ALA B 29 LYS B 35 C 8 TRP B 41 ? LYS B 48 ? TRP B 41 LYS B 48 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O SER A 23 ? O SER A 23 N ASP A 18 ? N ASP A 18 A 2 3 N MET A 13 ? N MET A 13 O ILE A 107 ? O ILE A 107 A 3 4 N ALA A 108 ? N ALA A 108 O THR A 119 ? O THR A 119 A 4 5 N THR A 118 ? N THR A 118 O TYR B 116 ? O TYR B 116 A 5 6 O SER B 117 ? O SER B 117 N LEU B 110 ? N LEU B 110 A 6 7 O LEU B 111 ? O LEU B 111 N LEU B 17 ? N LEU B 17 A 7 8 N ASP B 18 ? N ASP B 18 O SER B 23 ? O SER B 23 B 1 2 O LEU A 55 ? O LEU A 55 N VAL A 14 ? N VAL A 14 B 2 3 N MET A 13 ? N MET A 13 O ILE A 107 ? O ILE A 107 B 3 4 N ALA A 108 ? N ALA A 108 O THR A 119 ? O THR A 119 B 4 5 N THR A 118 ? N THR A 118 O TYR B 116 ? O TYR B 116 B 5 6 O SER B 117 ? O SER B 117 N LEU B 110 ? N LEU B 110 B 6 7 O LEU B 111 ? O LEU B 111 N LEU B 17 ? N LEU B 17 B 7 8 N VAL B 14 ? N VAL B 14 O LEU B 55 ? O LEU B 55 C 1 2 O ALA A 45 ? O ALA A 45 N VAL A 32 ? N VAL A 32 C 2 3 N HIS A 31 ? N HIS A 31 O GLU A 72 ? O GLU A 72 C 3 4 N ILE A 73 ? N ILE A 73 O ALA A 91 ? O ALA A 91 C 4 5 N VAL A 94 ? N VAL A 94 O GLU B 89 ? O GLU B 89 C 5 6 O PHE B 95 ? O PHE B 95 N TYR B 69 ? N TYR B 69 C 6 7 O GLU B 72 ? O GLU B 72 N HIS B 31 ? N HIS B 31 C 7 8 N VAL B 32 ? N VAL B 32 O ALA B 45 ? O ALA B 45 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A KDH 128 ? 18 'BINDING SITE FOR RESIDUE KDH A 128' AC2 Software A KDH 129 ? 15 'BINDING SITE FOR RESIDUE KDH A 129' AC3 Software A GOL 130 ? 6 'BINDING SITE FOR RESIDUE GOL A 130' AC4 Software B KDH 128 ? 13 'BINDING SITE FOR RESIDUE KDH B 128' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 18 ASP A 18 ? ASP A 18 . ? 1_555 ? 2 AC1 18 VAL A 20 ? VAL A 20 . ? 1_555 ? 3 AC1 18 ARG A 21 ? ARG A 21 . ? 1_555 ? 4 AC1 18 TYR A 78 ? TYR A 78 . ? 1_555 ? 5 AC1 18 TRP A 79 ? TRP A 79 . ? 1_555 ? 6 AC1 18 LEU A 82 ? LEU A 82 . ? 2_565 ? 7 AC1 18 LEU A 82 ? LEU A 82 . ? 1_555 ? 8 AC1 18 ILE A 84 ? ILE A 84 . ? 1_555 ? 9 AC1 18 HOH G . ? HOH A 175 . ? 1_555 ? 10 AC1 18 HOH G . ? HOH A 175 . ? 2_565 ? 11 AC1 18 HOH G . ? HOH A 186 . ? 1_555 ? 12 AC1 18 HOH G . ? HOH A 192 . ? 1_555 ? 13 AC1 18 HOH G . ? HOH A 212 . ? 2_565 ? 14 AC1 18 HOH G . ? HOH A 214 . ? 1_555 ? 15 AC1 18 VAL B 20 ? VAL B 20 . ? 2_555 ? 16 AC1 18 GLY B 83 ? GLY B 83 . ? 1_565 ? 17 AC1 18 SER B 85 ? SER B 85 . ? 2_555 ? 18 AC1 18 TYR B 114 ? TYR B 114 . ? 2_555 ? 19 AC2 15 HIS A 31 ? HIS A 31 . ? 1_555 ? 20 AC2 15 VAL A 32 ? VAL A 32 . ? 1_555 ? 21 AC2 15 PHE A 33 ? PHE A 33 . ? 1_555 ? 22 AC2 15 TRP A 41 ? TRP A 41 . ? 1_555 ? 23 AC2 15 PRO A 43 ? PRO A 43 . ? 1_555 ? 24 AC2 15 PHE A 44 ? PHE A 44 . ? 1_555 ? 25 AC2 15 ALA A 45 ? ALA A 45 . ? 1_555 ? 26 AC2 15 SER A 46 ? SER A 46 . ? 1_555 ? 27 AC2 15 GLU A 61 ? GLU A 61 . ? 3_455 ? 28 AC2 15 GLU A 62 ? GLU A 62 . ? 3_455 ? 29 AC2 15 GLU A 72 ? GLU A 72 . ? 1_555 ? 30 AC2 15 PRO A 102 ? PRO A 102 . ? 3_455 ? 31 AC2 15 HOH G . ? HOH A 136 . ? 1_555 ? 32 AC2 15 HOH G . ? HOH A 153 . ? 1_555 ? 33 AC2 15 HOH G . ? HOH A 193 . ? 3_455 ? 34 AC3 6 LEU A 17 ? LEU A 17 . ? 2_555 ? 35 AC3 6 ALA A 108 ? ALA A 108 . ? 1_555 ? 36 AC3 6 LEU A 110 ? LEU A 110 . ? 2_555 ? 37 AC3 6 SER A 117 ? SER A 117 . ? 1_555 ? 38 AC3 6 THR A 119 ? THR A 119 . ? 1_555 ? 39 AC3 6 HOH G . ? HOH A 183 . ? 1_555 ? 40 AC4 13 HIS B 31 ? HIS B 31 . ? 1_555 ? 41 AC4 13 VAL B 32 ? VAL B 32 . ? 1_555 ? 42 AC4 13 PHE B 33 ? PHE B 33 . ? 1_555 ? 43 AC4 13 TRP B 41 ? TRP B 41 . ? 1_555 ? 44 AC4 13 PRO B 43 ? PRO B 43 . ? 1_555 ? 45 AC4 13 PHE B 44 ? PHE B 44 . ? 1_555 ? 46 AC4 13 ALA B 45 ? ALA B 45 . ? 1_555 ? 47 AC4 13 GLU B 61 ? GLU B 61 . ? 3_444 ? 48 AC4 13 GLU B 72 ? GLU B 72 . ? 1_555 ? 49 AC4 13 GLY B 101 ? GLY B 101 . ? 3_444 ? 50 AC4 13 PRO B 102 ? PRO B 102 . ? 3_444 ? 51 AC4 13 HOH H . ? HOH B 175 . ? 1_555 ? 52 AC4 13 HOH H . ? HOH B 177 . ? 1_555 ? # _atom_sites.entry_id 3NG5 _atom_sites.fract_transf_matrix[1][1] 0.011618 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022630 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015351 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 ? ? ? A . n A 1 2 PRO 2 2 ? ? ? A . n A 1 3 THR 3 3 ? ? ? A . n A 1 4 GLY 4 4 ? ? ? A . n A 1 5 THR 5 5 ? ? ? A . n A 1 6 GLY 6 6 ? ? ? A . n A 1 7 GLU 7 7 ? ? ? A . n A 1 8 SER 8 8 ? ? ? A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 CYS 10 10 10 CYS CYS A . n A 1 11 PRO 11 11 11 PRO PRO A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 MET 13 13 13 MET MET A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 ASP 18 18 18 ASP ASP A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 PRO 24 24 24 PRO PRO A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 ILE 26 26 26 ILE ILE A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 MET 30 30 30 MET MET A . n A 1 31 HIS 31 31 31 HIS HIS A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 PHE 33 33 33 PHE PHE A . n A 1 34 ARG 34 34 34 ARG ARG A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 ALA 36 36 36 ALA ALA A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 THR 40 40 40 THR THR A . n A 1 41 TRP 41 41 41 TRP TRP A . n A 1 42 GLU 42 42 42 GLU GLU A . n A 1 43 PRO 43 43 43 PRO PRO A . n A 1 44 PHE 44 44 44 PHE PHE A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 SER 46 46 46 SER SER A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 HIS 56 56 56 HIS HIS A . n A 1 57 GLY 57 57 57 GLY GLY A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 THR 59 59 59 THR THR A . n A 1 60 THR 60 60 60 THR THR A . n A 1 61 GLU 61 61 61 GLU GLU A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 PHE 64 64 64 PHE PHE A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 ILE 68 68 68 ILE ILE A . n A 1 69 TYR 69 69 69 TYR TYR A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 GLU 72 72 72 GLU GLU A . n A 1 73 ILE 73 73 73 ILE ILE A . n A 1 74 ASP 74 74 74 ASP ASP A . n A 1 75 THR 75 75 75 THR THR A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 TYR 78 78 78 TYR TYR A . n A 1 79 TRP 79 79 79 TRP TRP A . n A 1 80 LYS 80 80 80 LYS LYS A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 GLY 83 83 83 GLY GLY A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 PRO 86 86 86 PRO PRO A . n A 1 87 PHE 87 87 87 PHE PHE A . n A 1 88 HIS 88 88 88 HIS HIS A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 HIS 90 90 90 HIS HIS A . n A 1 91 ALA 91 91 91 ALA ALA A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 VAL 94 94 94 VAL VAL A . n A 1 95 PHE 95 95 95 PHE PHE A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 ASP 99 99 99 ASP ASP A . n A 1 100 SER 100 100 100 SER SER A . n A 1 101 GLY 101 101 101 GLY GLY A . n A 1 102 PRO 102 102 102 PRO PRO A . n A 1 103 ARG 103 103 103 ARG ARG A . n A 1 104 ARG 104 104 104 ARG ARG A . n A 1 105 TYR 105 105 105 TYR TYR A . n A 1 106 THR 106 106 106 THR THR A . n A 1 107 ILE 107 107 107 ILE ILE A . n A 1 108 ALA 108 108 108 ALA ALA A . n A 1 109 ALA 109 109 109 ALA ALA A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 SER 112 112 112 SER SER A . n A 1 113 PRO 113 113 113 PRO PRO A . n A 1 114 TYR 114 114 114 TYR TYR A . n A 1 115 SER 115 115 115 SER SER A . n A 1 116 TYR 116 116 116 TYR TYR A . n A 1 117 SER 117 117 117 SER SER A . n A 1 118 THR 118 118 118 THR THR A . n A 1 119 THR 119 119 119 THR THR A . n A 1 120 ALA 120 120 120 ALA ALA A . n A 1 121 VAL 121 121 121 VAL VAL A . n A 1 122 VAL 122 122 122 VAL VAL A . n A 1 123 THR 123 123 123 THR THR A . n A 1 124 ASN 124 124 124 ASN ASN A . n A 1 125 PRO 125 125 125 PRO PRO A . n A 1 126 LYS 126 126 ? ? ? A . n A 1 127 GLU 127 127 ? ? ? A . n B 1 1 GLY 1 1 ? ? ? B . n B 1 2 PRO 2 2 ? ? ? B . n B 1 3 THR 3 3 ? ? ? B . n B 1 4 GLY 4 4 ? ? ? B . n B 1 5 THR 5 5 ? ? ? B . n B 1 6 GLY 6 6 ? ? ? B . n B 1 7 GLU 7 7 ? ? ? B . n B 1 8 SER 8 8 ? ? ? B . n B 1 9 LYS 9 9 9 LYS LYS B . n B 1 10 CYS 10 10 10 CYS CYS B . n B 1 11 PRO 11 11 11 PRO PRO B . n B 1 12 LEU 12 12 12 LEU LEU B . n B 1 13 MET 13 13 13 MET MET B . n B 1 14 VAL 14 14 14 VAL VAL B . n B 1 15 LYS 15 15 15 LYS LYS B . n B 1 16 VAL 16 16 16 VAL VAL B . n B 1 17 LEU 17 17 17 LEU LEU B . n B 1 18 ASP 18 18 18 ASP ASP B . n B 1 19 ALA 19 19 19 ALA ALA B . n B 1 20 VAL 20 20 20 VAL VAL B . n B 1 21 ARG 21 21 21 ARG ARG B . n B 1 22 GLY 22 22 22 GLY GLY B . n B 1 23 SER 23 23 23 SER SER B . n B 1 24 PRO 24 24 24 PRO PRO B . n B 1 25 ALA 25 25 25 ALA ALA B . n B 1 26 ILE 26 26 26 ILE ILE B . n B 1 27 ASN 27 27 27 ASN ASN B . n B 1 28 VAL 28 28 28 VAL VAL B . n B 1 29 ALA 29 29 29 ALA ALA B . n B 1 30 MET 30 30 30 MET MET B . n B 1 31 HIS 31 31 31 HIS HIS B . n B 1 32 VAL 32 32 32 VAL VAL B . n B 1 33 PHE 33 33 33 PHE PHE B . n B 1 34 ARG 34 34 34 ARG ARG B . n B 1 35 LYS 35 35 35 LYS LYS B . n B 1 36 ALA 36 36 36 ALA ALA B . n B 1 37 ALA 37 37 37 ALA ALA B . n B 1 38 ASP 38 38 38 ASP ASP B . n B 1 39 ASP 39 39 39 ASP ASP B . n B 1 40 THR 40 40 40 THR THR B . n B 1 41 TRP 41 41 41 TRP TRP B . n B 1 42 GLU 42 42 42 GLU GLU B . n B 1 43 PRO 43 43 43 PRO PRO B . n B 1 44 PHE 44 44 44 PHE PHE B . n B 1 45 ALA 45 45 45 ALA ALA B . n B 1 46 SER 46 46 46 SER SER B . n B 1 47 GLY 47 47 47 GLY GLY B . n B 1 48 LYS 48 48 48 LYS LYS B . n B 1 49 THR 49 49 49 THR THR B . n B 1 50 SER 50 50 50 SER SER B . n B 1 51 GLU 51 51 51 GLU GLU B . n B 1 52 SER 52 52 52 SER SER B . n B 1 53 GLY 53 53 53 GLY GLY B . n B 1 54 GLU 54 54 54 GLU GLU B . n B 1 55 LEU 55 55 55 LEU LEU B . n B 1 56 HIS 56 56 56 HIS HIS B . n B 1 57 GLY 57 57 57 GLY GLY B . n B 1 58 LEU 58 58 58 LEU LEU B . n B 1 59 THR 59 59 59 THR THR B . n B 1 60 THR 60 60 60 THR THR B . n B 1 61 GLU 61 61 61 GLU GLU B . n B 1 62 GLU 62 62 62 GLU GLU B . n B 1 63 GLU 63 63 63 GLU GLU B . n B 1 64 PHE 64 64 64 PHE PHE B . n B 1 65 VAL 65 65 65 VAL VAL B . n B 1 66 GLU 66 66 66 GLU GLU B . n B 1 67 GLY 67 67 67 GLY GLY B . n B 1 68 ILE 68 68 68 ILE ILE B . n B 1 69 TYR 69 69 69 TYR TYR B . n B 1 70 LYS 70 70 70 LYS LYS B . n B 1 71 VAL 71 71 71 VAL VAL B . n B 1 72 GLU 72 72 72 GLU GLU B . n B 1 73 ILE 73 73 73 ILE ILE B . n B 1 74 ASP 74 74 74 ASP ASP B . n B 1 75 THR 75 75 75 THR THR B . n B 1 76 LYS 76 76 76 LYS LYS B . n B 1 77 SER 77 77 77 SER SER B . n B 1 78 TYR 78 78 78 TYR TYR B . n B 1 79 TRP 79 79 79 TRP TRP B . n B 1 80 LYS 80 80 80 LYS LYS B . n B 1 81 ALA 81 81 81 ALA ALA B . n B 1 82 LEU 82 82 82 LEU LEU B . n B 1 83 GLY 83 83 83 GLY GLY B . n B 1 84 ILE 84 84 84 ILE ILE B . n B 1 85 SER 85 85 85 SER SER B . n B 1 86 PRO 86 86 86 PRO PRO B . n B 1 87 PHE 87 87 87 PHE PHE B . n B 1 88 HIS 88 88 88 HIS HIS B . n B 1 89 GLU 89 89 89 GLU GLU B . n B 1 90 HIS 90 90 90 HIS HIS B . n B 1 91 ALA 91 91 91 ALA ALA B . n B 1 92 GLU 92 92 92 GLU GLU B . n B 1 93 VAL 93 93 93 VAL VAL B . n B 1 94 VAL 94 94 94 VAL VAL B . n B 1 95 PHE 95 95 95 PHE PHE B . n B 1 96 THR 96 96 96 THR THR B . n B 1 97 ALA 97 97 97 ALA ALA B . n B 1 98 ASN 98 98 98 ASN ASN B . n B 1 99 ASP 99 99 99 ASP ASP B . n B 1 100 SER 100 100 100 SER SER B . n B 1 101 GLY 101 101 101 GLY GLY B . n B 1 102 PRO 102 102 102 PRO PRO B . n B 1 103 ARG 103 103 103 ARG ARG B . n B 1 104 ARG 104 104 104 ARG ARG B . n B 1 105 TYR 105 105 105 TYR TYR B . n B 1 106 THR 106 106 106 THR THR B . n B 1 107 ILE 107 107 107 ILE ILE B . n B 1 108 ALA 108 108 108 ALA ALA B . n B 1 109 ALA 109 109 109 ALA ALA B . n B 1 110 LEU 110 110 110 LEU LEU B . n B 1 111 LEU 111 111 111 LEU LEU B . n B 1 112 SER 112 112 112 SER SER B . n B 1 113 PRO 113 113 113 PRO PRO B . n B 1 114 TYR 114 114 114 TYR TYR B . n B 1 115 SER 115 115 115 SER SER B . n B 1 116 TYR 116 116 116 TYR TYR B . n B 1 117 SER 117 117 117 SER SER B . n B 1 118 THR 118 118 118 THR THR B . n B 1 119 THR 119 119 119 THR THR B . n B 1 120 ALA 120 120 120 ALA ALA B . n B 1 121 VAL 121 121 121 VAL VAL B . n B 1 122 VAL 122 122 122 VAL VAL B . n B 1 123 THR 123 123 123 THR THR B . n B 1 124 ASN 124 124 124 ASN ASN B . n B 1 125 PRO 125 125 ? ? ? B . n B 1 126 LYS 126 126 ? ? ? B . n B 1 127 GLU 127 127 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 KDH 1 128 2 KDH EGT A . D 2 KDH 1 129 3 KDH EGT A . E 3 GOL 1 130 4 GOL GOL A . F 2 KDH 1 128 1 KDH EGT B . G 4 HOH 1 131 131 HOH HOH A . G 4 HOH 2 132 132 HOH HOH A . G 4 HOH 3 133 2 HOH HOH A . G 4 HOH 4 134 134 HOH HOH A . G 4 HOH 5 135 135 HOH HOH A . G 4 HOH 6 136 136 HOH HOH A . G 4 HOH 7 137 7 HOH HOH A . G 4 HOH 8 138 138 HOH HOH A . G 4 HOH 9 139 8 HOH HOH A . G 4 HOH 10 140 140 HOH HOH A . G 4 HOH 11 141 141 HOH HOH A . G 4 HOH 12 142 142 HOH HOH A . G 4 HOH 13 143 9 HOH HOH A . G 4 HOH 14 144 144 HOH HOH A . G 4 HOH 15 145 145 HOH HOH A . G 4 HOH 16 146 146 HOH HOH A . G 4 HOH 17 147 147 HOH HOH A . G 4 HOH 18 148 10 HOH HOH A . G 4 HOH 19 149 11 HOH HOH A . G 4 HOH 20 150 12 HOH HOH A . G 4 HOH 21 151 13 HOH HOH A . G 4 HOH 22 152 152 HOH HOH A . G 4 HOH 23 153 153 HOH HOH A . G 4 HOH 24 154 17 HOH HOH A . G 4 HOH 25 155 18 HOH HOH A . G 4 HOH 26 156 156 HOH HOH A . G 4 HOH 27 157 19 HOH HOH A . G 4 HOH 28 158 20 HOH HOH A . G 4 HOH 29 159 21 HOH HOH A . G 4 HOH 30 160 22 HOH HOH A . G 4 HOH 31 161 26 HOH HOH A . G 4 HOH 32 162 28 HOH HOH A . G 4 HOH 33 163 29 HOH HOH A . G 4 HOH 34 164 30 HOH HOH A . G 4 HOH 35 165 32 HOH HOH A . G 4 HOH 36 166 40 HOH HOH A . G 4 HOH 37 167 41 HOH HOH A . G 4 HOH 38 168 42 HOH HOH A . G 4 HOH 39 169 44 HOH HOH A . G 4 HOH 40 170 46 HOH HOH A . G 4 HOH 41 171 47 HOH HOH A . G 4 HOH 42 172 48 HOH HOH A . G 4 HOH 43 173 49 HOH HOH A . G 4 HOH 44 174 50 HOH HOH A . G 4 HOH 45 175 57 HOH HOH A . G 4 HOH 46 176 58 HOH HOH A . G 4 HOH 47 177 59 HOH HOH A . G 4 HOH 48 178 60 HOH HOH A . G 4 HOH 49 179 61 HOH HOH A . G 4 HOH 50 180 62 HOH HOH A . G 4 HOH 51 181 63 HOH HOH A . G 4 HOH 52 182 65 HOH HOH A . G 4 HOH 53 183 66 HOH HOH A . G 4 HOH 54 184 67 HOH HOH A . G 4 HOH 55 185 73 HOH HOH A . G 4 HOH 56 186 74 HOH HOH A . G 4 HOH 57 187 75 HOH HOH A . G 4 HOH 58 188 76 HOH HOH A . G 4 HOH 59 189 77 HOH HOH A . G 4 HOH 60 190 78 HOH HOH A . G 4 HOH 61 191 79 HOH HOH A . G 4 HOH 62 192 80 HOH HOH A . G 4 HOH 63 193 82 HOH HOH A . G 4 HOH 64 194 84 HOH HOH A . G 4 HOH 65 195 86 HOH HOH A . G 4 HOH 66 196 87 HOH HOH A . G 4 HOH 67 197 90 HOH HOH A . G 4 HOH 68 198 96 HOH HOH A . G 4 HOH 69 199 98 HOH HOH A . G 4 HOH 70 200 99 HOH HOH A . G 4 HOH 71 201 100 HOH HOH A . G 4 HOH 72 202 103 HOH HOH A . G 4 HOH 73 203 104 HOH HOH A . G 4 HOH 74 204 105 HOH HOH A . G 4 HOH 75 205 107 HOH HOH A . G 4 HOH 76 206 109 HOH HOH A . G 4 HOH 77 207 110 HOH HOH A . G 4 HOH 78 208 113 HOH HOH A . G 4 HOH 79 209 114 HOH HOH A . G 4 HOH 80 210 115 HOH HOH A . G 4 HOH 81 211 119 HOH HOH A . G 4 HOH 82 212 121 HOH HOH A . G 4 HOH 83 213 122 HOH HOH A . G 4 HOH 84 214 123 HOH HOH A . G 4 HOH 85 215 124 HOH HOH A . G 4 HOH 86 216 125 HOH HOH A . G 4 HOH 87 217 126 HOH HOH A . G 4 HOH 88 218 127 HOH HOH A . H 4 HOH 1 129 129 HOH HOH B . H 4 HOH 2 130 130 HOH HOH B . H 4 HOH 3 131 1 HOH HOH B . H 4 HOH 4 132 3 HOH HOH B . H 4 HOH 5 133 133 HOH HOH B . H 4 HOH 6 134 4 HOH HOH B . H 4 HOH 7 135 5 HOH HOH B . H 4 HOH 8 136 6 HOH HOH B . H 4 HOH 9 137 137 HOH HOH B . H 4 HOH 10 138 14 HOH HOH B . H 4 HOH 11 139 139 HOH HOH B . H 4 HOH 12 140 15 HOH HOH B . H 4 HOH 13 141 16 HOH HOH B . H 4 HOH 14 142 23 HOH HOH B . H 4 HOH 15 143 143 HOH HOH B . H 4 HOH 16 144 24 HOH HOH B . H 4 HOH 17 145 25 HOH HOH B . H 4 HOH 18 146 27 HOH HOH B . H 4 HOH 19 147 31 HOH HOH B . H 4 HOH 20 148 148 HOH HOH B . H 4 HOH 21 149 149 HOH HOH B . H 4 HOH 22 150 150 HOH HOH B . H 4 HOH 23 151 151 HOH HOH B . H 4 HOH 24 152 33 HOH HOH B . H 4 HOH 25 153 34 HOH HOH B . H 4 HOH 26 154 154 HOH HOH B . H 4 HOH 27 155 155 HOH HOH B . H 4 HOH 28 156 35 HOH HOH B . H 4 HOH 29 157 157 HOH HOH B . H 4 HOH 30 158 158 HOH HOH B . H 4 HOH 31 159 159 HOH HOH B . H 4 HOH 32 160 160 HOH HOH B . H 4 HOH 33 161 161 HOH HOH B . H 4 HOH 34 162 36 HOH HOH B . H 4 HOH 35 163 37 HOH HOH B . H 4 HOH 36 164 38 HOH HOH B . H 4 HOH 37 165 39 HOH HOH B . H 4 HOH 38 166 43 HOH HOH B . H 4 HOH 39 167 45 HOH HOH B . H 4 HOH 40 168 51 HOH HOH B . H 4 HOH 41 169 52 HOH HOH B . H 4 HOH 42 170 53 HOH HOH B . H 4 HOH 43 171 54 HOH HOH B . H 4 HOH 44 172 55 HOH HOH B . H 4 HOH 45 173 56 HOH HOH B . H 4 HOH 46 174 64 HOH HOH B . H 4 HOH 47 175 68 HOH HOH B . H 4 HOH 48 176 69 HOH HOH B . H 4 HOH 49 177 70 HOH HOH B . H 4 HOH 50 178 71 HOH HOH B . H 4 HOH 51 179 72 HOH HOH B . H 4 HOH 52 180 81 HOH HOH B . H 4 HOH 53 181 83 HOH HOH B . H 4 HOH 54 182 85 HOH HOH B . H 4 HOH 55 183 88 HOH HOH B . H 4 HOH 56 184 89 HOH HOH B . H 4 HOH 57 185 91 HOH HOH B . H 4 HOH 58 186 92 HOH HOH B . H 4 HOH 59 187 93 HOH HOH B . H 4 HOH 60 188 94 HOH HOH B . H 4 HOH 61 189 95 HOH HOH B . H 4 HOH 62 190 97 HOH HOH B . H 4 HOH 63 191 101 HOH HOH B . H 4 HOH 64 192 102 HOH HOH B . H 4 HOH 65 193 106 HOH HOH B . H 4 HOH 66 194 108 HOH HOH B . H 4 HOH 67 195 111 HOH HOH B . H 4 HOH 68 196 112 HOH HOH B . H 4 HOH 69 197 116 HOH HOH B . H 4 HOH 70 198 117 HOH HOH B . H 4 HOH 71 199 118 HOH HOH B . H 4 HOH 72 200 120 HOH HOH B . H 4 HOH 73 201 128 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6170 ? 1 MORE -44 ? 1 'SSA (A^2)' 19450 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,-y,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 165 ? G HOH . 2 1 B HOH 187 ? H HOH . 3 1 B HOH 196 ? H HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-07-07 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' 6 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' pdbx_initial_refinement_model 6 3 'Structure model' struct_ref_seq_dif 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_chem_comp.pdbx_synonyms' 2 3 'Structure model' '_database_2.pdbx_DOI' 3 3 'Structure model' '_database_2.pdbx_database_accession' 4 3 'Structure model' '_struct_ref_seq_dif.details' 5 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -13.3072 0.2457 -5.9900 0.1471 0.0988 0.1514 0.0015 0.0641 -0.0035 0.4655 1.1487 0.3144 -0.1512 -0.0754 -0.0525 -0.0279 0.0120 0.0203 -0.0464 -0.0454 0.2929 0.2371 0.0311 0.0094 'X-RAY DIFFRACTION' 2 ? refined -13.0310 -1.9584 -26.1226 0.1882 0.1897 0.2007 -0.0427 -0.0628 0.0269 0.3393 1.8365 0.4933 0.0667 0.3803 -0.2028 -0.0830 0.1556 -0.0695 0.0426 0.0238 0.3846 -0.2458 -0.0408 0.0486 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 9 A 125 '(chain A and resid 9:125)' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 9 B 124 '(chain B and resid 9:124)' ? ? ? ? ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 2 PHENIX 1.5_2 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 3 PDB_EXTRACT 3.100 'May. 21, 2010' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 ADSC Quantum ? ? ? ? 'data collection' ? ? ? 5 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 6 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 7 CNS . ? ? ? ? phasing ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 39 ? ? 82.97 1.26 2 1 ASP B 38 ? ? -90.96 34.52 3 1 ASP B 39 ? ? 47.08 16.38 4 1 PHE B 44 ? ? -126.88 -56.63 # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag N _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 0 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id A _pdbx_unobs_or_zero_occ_atoms.auth_comp_id GOL _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 130 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id C1 _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id E _pdbx_unobs_or_zero_occ_atoms.label_comp_id GOL _pdbx_unobs_or_zero_occ_atoms.label_seq_id ? _pdbx_unobs_or_zero_occ_atoms.label_atom_id C1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 1 ? A GLY 1 2 1 Y 1 A PRO 2 ? A PRO 2 3 1 Y 1 A THR 3 ? A THR 3 4 1 Y 1 A GLY 4 ? A GLY 4 5 1 Y 1 A THR 5 ? A THR 5 6 1 Y 1 A GLY 6 ? A GLY 6 7 1 Y 1 A GLU 7 ? A GLU 7 8 1 Y 1 A SER 8 ? A SER 8 9 1 Y 1 A LYS 126 ? A LYS 126 10 1 Y 1 A GLU 127 ? A GLU 127 11 1 Y 1 B GLY 1 ? B GLY 1 12 1 Y 1 B PRO 2 ? B PRO 2 13 1 Y 1 B THR 3 ? B THR 3 14 1 Y 1 B GLY 4 ? B GLY 4 15 1 Y 1 B THR 5 ? B THR 5 16 1 Y 1 B GLY 6 ? B GLY 6 17 1 Y 1 B GLU 7 ? B GLU 7 18 1 Y 1 B SER 8 ? B SER 8 19 1 Y 1 B PRO 125 ? B PRO 125 20 1 Y 1 B LYS 126 ? B LYS 126 21 1 Y 1 B GLU 127 ? B GLU 127 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLU N N N N 88 GLU CA C N S 89 GLU C C N N 90 GLU O O N N 91 GLU CB C N N 92 GLU CG C N N 93 GLU CD C N N 94 GLU OE1 O N N 95 GLU OE2 O N N 96 GLU OXT O N N 97 GLU H H N N 98 GLU H2 H N N 99 GLU HA H N N 100 GLU HB2 H N N 101 GLU HB3 H N N 102 GLU HG2 H N N 103 GLU HG3 H N N 104 GLU HE2 H N N 105 GLU HXT H N N 106 GLY N N N N 107 GLY CA C N N 108 GLY C C N N 109 GLY O O N N 110 GLY OXT O N N 111 GLY H H N N 112 GLY H2 H N N 113 GLY HA2 H N N 114 GLY HA3 H N N 115 GLY HXT H N N 116 GOL C1 C N N 117 GOL O1 O N N 118 GOL C2 C N N 119 GOL O2 O N N 120 GOL C3 C N N 121 GOL O3 O N N 122 GOL H11 H N N 123 GOL H12 H N N 124 GOL HO1 H N N 125 GOL H2 H N N 126 GOL HO2 H N N 127 GOL H31 H N N 128 GOL H32 H N N 129 GOL HO3 H N N 130 HIS N N N N 131 HIS CA C N S 132 HIS C C N N 133 HIS O O N N 134 HIS CB C N N 135 HIS CG C Y N 136 HIS ND1 N Y N 137 HIS CD2 C Y N 138 HIS CE1 C Y N 139 HIS NE2 N Y N 140 HIS OXT O N N 141 HIS H H N N 142 HIS H2 H N N 143 HIS HA H N N 144 HIS HB2 H N N 145 HIS HB3 H N N 146 HIS HD1 H N N 147 HIS HD2 H N N 148 HIS HE1 H N N 149 HIS HE2 H N N 150 HIS HXT H N N 151 HOH O O N N 152 HOH H1 H N N 153 HOH H2 H N N 154 ILE N N N N 155 ILE CA C N S 156 ILE C C N N 157 ILE O O N N 158 ILE CB C N S 159 ILE CG1 C N N 160 ILE CG2 C N N 161 ILE CD1 C N N 162 ILE OXT O N N 163 ILE H H N N 164 ILE H2 H N N 165 ILE HA H N N 166 ILE HB H N N 167 ILE HG12 H N N 168 ILE HG13 H N N 169 ILE HG21 H N N 170 ILE HG22 H N N 171 ILE HG23 H N N 172 ILE HD11 H N N 173 ILE HD12 H N N 174 ILE HD13 H N N 175 ILE HXT H N N 176 KDH O1 O N N 177 KDH C3 C Y N 178 KDH C6 C Y N 179 KDH O7 O N N 180 KDH C9 C Y N 181 KDH O10 O N N 182 KDH C12 C Y N 183 KDH C14 C Y N 184 KDH C15 C N R 185 KDH C20 C Y N 186 KDH C21 C Y N 187 KDH C24 C Y N 188 KDH C26 C Y N 189 KDH C29 C Y N 190 KDH C31 C Y N 191 KDH C33 C N R 192 KDH C36 C N N 193 KDH C38 C Y N 194 KDH C39 C Y N 195 KDH C41 C Y N 196 KDH C01 C N N 197 KDH O01 O N N 198 KDH O02 O N N 199 KDH O03 O N N 200 KDH C4 C Y N 201 KDH O35 O N N 202 KDH O37 O N N 203 KDH C43 C Y N 204 KDH O44 O N N 205 KDH C46 C Y N 206 KDH O47 O N N 207 KDH C49 C Y N 208 KDH O50 O N N 209 KDH HO1 H N N 210 KDH H21 H N N 211 KDH H33 H N N 212 KDH H4 H N N 213 KDH HO7 H N N 214 KDH H01 H N N 215 KDH H01A H N N 216 KDH HO03 H N N 217 KDH HO10 H N N 218 KDH H12 H N N 219 KDH H15 H N N 220 KDH H26 H N N 221 KDH H39 H N N 222 KDH H41 H N N 223 KDH HO02 H N N 224 KDH HO44 H N N 225 KDH HO47 H N N 226 KDH HO50 H N N 227 LEU N N N N 228 LEU CA C N S 229 LEU C C N N 230 LEU O O N N 231 LEU CB C N N 232 LEU CG C N N 233 LEU CD1 C N N 234 LEU CD2 C N N 235 LEU OXT O N N 236 LEU H H N N 237 LEU H2 H N N 238 LEU HA H N N 239 LEU HB2 H N N 240 LEU HB3 H N N 241 LEU HG H N N 242 LEU HD11 H N N 243 LEU HD12 H N N 244 LEU HD13 H N N 245 LEU HD21 H N N 246 LEU HD22 H N N 247 LEU HD23 H N N 248 LEU HXT H N N 249 LYS N N N N 250 LYS CA C N S 251 LYS C C N N 252 LYS O O N N 253 LYS CB C N N 254 LYS CG C N N 255 LYS CD C N N 256 LYS CE C N N 257 LYS NZ N N N 258 LYS OXT O N N 259 LYS H H N N 260 LYS H2 H N N 261 LYS HA H N N 262 LYS HB2 H N N 263 LYS HB3 H N N 264 LYS HG2 H N N 265 LYS HG3 H N N 266 LYS HD2 H N N 267 LYS HD3 H N N 268 LYS HE2 H N N 269 LYS HE3 H N N 270 LYS HZ1 H N N 271 LYS HZ2 H N N 272 LYS HZ3 H N N 273 LYS HXT H N N 274 MET N N N N 275 MET CA C N S 276 MET C C N N 277 MET O O N N 278 MET CB C N N 279 MET CG C N N 280 MET SD S N N 281 MET CE C N N 282 MET OXT O N N 283 MET H H N N 284 MET H2 H N N 285 MET HA H N N 286 MET HB2 H N N 287 MET HB3 H N N 288 MET HG2 H N N 289 MET HG3 H N N 290 MET HE1 H N N 291 MET HE2 H N N 292 MET HE3 H N N 293 MET HXT H N N 294 PHE N N N N 295 PHE CA C N S 296 PHE C C N N 297 PHE O O N N 298 PHE CB C N N 299 PHE CG C Y N 300 PHE CD1 C Y N 301 PHE CD2 C Y N 302 PHE CE1 C Y N 303 PHE CE2 C Y N 304 PHE CZ C Y N 305 PHE OXT O N N 306 PHE H H N N 307 PHE H2 H N N 308 PHE HA H N N 309 PHE HB2 H N N 310 PHE HB3 H N N 311 PHE HD1 H N N 312 PHE HD2 H N N 313 PHE HE1 H N N 314 PHE HE2 H N N 315 PHE HZ H N N 316 PHE HXT H N N 317 PRO N N N N 318 PRO CA C N S 319 PRO C C N N 320 PRO O O N N 321 PRO CB C N N 322 PRO CG C N N 323 PRO CD C N N 324 PRO OXT O N N 325 PRO H H N N 326 PRO HA H N N 327 PRO HB2 H N N 328 PRO HB3 H N N 329 PRO HG2 H N N 330 PRO HG3 H N N 331 PRO HD2 H N N 332 PRO HD3 H N N 333 PRO HXT H N N 334 SER N N N N 335 SER CA C N S 336 SER C C N N 337 SER O O N N 338 SER CB C N N 339 SER OG O N N 340 SER OXT O N N 341 SER H H N N 342 SER H2 H N N 343 SER HA H N N 344 SER HB2 H N N 345 SER HB3 H N N 346 SER HG H N N 347 SER HXT H N N 348 THR N N N N 349 THR CA C N S 350 THR C C N N 351 THR O O N N 352 THR CB C N R 353 THR OG1 O N N 354 THR CG2 C N N 355 THR OXT O N N 356 THR H H N N 357 THR H2 H N N 358 THR HA H N N 359 THR HB H N N 360 THR HG1 H N N 361 THR HG21 H N N 362 THR HG22 H N N 363 THR HG23 H N N 364 THR HXT H N N 365 TRP N N N N 366 TRP CA C N S 367 TRP C C N N 368 TRP O O N N 369 TRP CB C N N 370 TRP CG C Y N 371 TRP CD1 C Y N 372 TRP CD2 C Y N 373 TRP NE1 N Y N 374 TRP CE2 C Y N 375 TRP CE3 C Y N 376 TRP CZ2 C Y N 377 TRP CZ3 C Y N 378 TRP CH2 C Y N 379 TRP OXT O N N 380 TRP H H N N 381 TRP H2 H N N 382 TRP HA H N N 383 TRP HB2 H N N 384 TRP HB3 H N N 385 TRP HD1 H N N 386 TRP HE1 H N N 387 TRP HE3 H N N 388 TRP HZ2 H N N 389 TRP HZ3 H N N 390 TRP HH2 H N N 391 TRP HXT H N N 392 TYR N N N N 393 TYR CA C N S 394 TYR C C N N 395 TYR O O N N 396 TYR CB C N N 397 TYR CG C Y N 398 TYR CD1 C Y N 399 TYR CD2 C Y N 400 TYR CE1 C Y N 401 TYR CE2 C Y N 402 TYR CZ C Y N 403 TYR OH O N N 404 TYR OXT O N N 405 TYR H H N N 406 TYR H2 H N N 407 TYR HA H N N 408 TYR HB2 H N N 409 TYR HB3 H N N 410 TYR HD1 H N N 411 TYR HD2 H N N 412 TYR HE1 H N N 413 TYR HE2 H N N 414 TYR HH H N N 415 TYR HXT H N N 416 VAL N N N N 417 VAL CA C N S 418 VAL C C N N 419 VAL O O N N 420 VAL CB C N N 421 VAL CG1 C N N 422 VAL CG2 C N N 423 VAL OXT O N N 424 VAL H H N N 425 VAL H2 H N N 426 VAL HA H N N 427 VAL HB H N N 428 VAL HG11 H N N 429 VAL HG12 H N N 430 VAL HG13 H N N 431 VAL HG21 H N N 432 VAL HG22 H N N 433 VAL HG23 H N N 434 VAL HXT H N N 435 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLU N CA sing N N 83 GLU N H sing N N 84 GLU N H2 sing N N 85 GLU CA C sing N N 86 GLU CA CB sing N N 87 GLU CA HA sing N N 88 GLU C O doub N N 89 GLU C OXT sing N N 90 GLU CB CG sing N N 91 GLU CB HB2 sing N N 92 GLU CB HB3 sing N N 93 GLU CG CD sing N N 94 GLU CG HG2 sing N N 95 GLU CG HG3 sing N N 96 GLU CD OE1 doub N N 97 GLU CD OE2 sing N N 98 GLU OE2 HE2 sing N N 99 GLU OXT HXT sing N N 100 GLY N CA sing N N 101 GLY N H sing N N 102 GLY N H2 sing N N 103 GLY CA C sing N N 104 GLY CA HA2 sing N N 105 GLY CA HA3 sing N N 106 GLY C O doub N N 107 GLY C OXT sing N N 108 GLY OXT HXT sing N N 109 GOL C1 O1 sing N N 110 GOL C1 C2 sing N N 111 GOL C1 H11 sing N N 112 GOL C1 H12 sing N N 113 GOL O1 HO1 sing N N 114 GOL C2 O2 sing N N 115 GOL C2 C3 sing N N 116 GOL C2 H2 sing N N 117 GOL O2 HO2 sing N N 118 GOL C3 O3 sing N N 119 GOL C3 H31 sing N N 120 GOL C3 H32 sing N N 121 GOL O3 HO3 sing N N 122 HIS N CA sing N N 123 HIS N H sing N N 124 HIS N H2 sing N N 125 HIS CA C sing N N 126 HIS CA CB sing N N 127 HIS CA HA sing N N 128 HIS C O doub N N 129 HIS C OXT sing N N 130 HIS CB CG sing N N 131 HIS CB HB2 sing N N 132 HIS CB HB3 sing N N 133 HIS CG ND1 sing Y N 134 HIS CG CD2 doub Y N 135 HIS ND1 CE1 doub Y N 136 HIS ND1 HD1 sing N N 137 HIS CD2 NE2 sing Y N 138 HIS CD2 HD2 sing N N 139 HIS CE1 NE2 sing Y N 140 HIS CE1 HE1 sing N N 141 HIS NE2 HE2 sing N N 142 HIS OXT HXT sing N N 143 HOH O H1 sing N N 144 HOH O H2 sing N N 145 ILE N CA sing N N 146 ILE N H sing N N 147 ILE N H2 sing N N 148 ILE CA C sing N N 149 ILE CA CB sing N N 150 ILE CA HA sing N N 151 ILE C O doub N N 152 ILE C OXT sing N N 153 ILE CB CG1 sing N N 154 ILE CB CG2 sing N N 155 ILE CB HB sing N N 156 ILE CG1 CD1 sing N N 157 ILE CG1 HG12 sing N N 158 ILE CG1 HG13 sing N N 159 ILE CG2 HG21 sing N N 160 ILE CG2 HG22 sing N N 161 ILE CG2 HG23 sing N N 162 ILE CD1 HD11 sing N N 163 ILE CD1 HD12 sing N N 164 ILE CD1 HD13 sing N N 165 ILE OXT HXT sing N N 166 KDH O1 C3 sing N N 167 KDH O1 HO1 sing N N 168 KDH C3 C6 doub Y N 169 KDH C3 C4 sing Y N 170 KDH C6 O7 sing N N 171 KDH C6 C9 sing Y N 172 KDH O7 HO7 sing N N 173 KDH C9 O10 sing N N 174 KDH C9 C12 doub Y N 175 KDH O10 HO10 sing N N 176 KDH C12 C14 sing Y N 177 KDH C12 H12 sing N N 178 KDH C14 C15 sing N N 179 KDH C14 C4 doub Y N 180 KDH C15 C33 sing N N 181 KDH C15 O01 sing N N 182 KDH C15 H15 sing N N 183 KDH C20 C21 doub Y N 184 KDH C20 C31 sing Y N 185 KDH C20 O01 sing N N 186 KDH C21 C24 sing Y N 187 KDH C21 H21 sing N N 188 KDH C24 C26 doub Y N 189 KDH C24 O02 sing N N 190 KDH C26 C29 sing Y N 191 KDH C26 H26 sing N N 192 KDH C29 C31 doub Y N 193 KDH C29 O03 sing N N 194 KDH C31 C01 sing N N 195 KDH C33 C01 sing N N 196 KDH C33 O35 sing N N 197 KDH C33 H33 sing N N 198 KDH C36 C38 sing N N 199 KDH C36 O35 sing N N 200 KDH C36 O37 doub N N 201 KDH C38 C39 doub Y N 202 KDH C38 C41 sing Y N 203 KDH C39 C49 sing Y N 204 KDH C39 H39 sing N N 205 KDH C41 C43 doub Y N 206 KDH C41 H41 sing N N 207 KDH C01 H01 sing N N 208 KDH C01 H01A sing N N 209 KDH O02 HO02 sing N N 210 KDH O03 HO03 sing N N 211 KDH C4 H4 sing N N 212 KDH C43 O44 sing N N 213 KDH C43 C46 sing Y N 214 KDH O44 HO44 sing N N 215 KDH C46 O47 sing N N 216 KDH C46 C49 doub Y N 217 KDH O47 HO47 sing N N 218 KDH C49 O50 sing N N 219 KDH O50 HO50 sing N N 220 LEU N CA sing N N 221 LEU N H sing N N 222 LEU N H2 sing N N 223 LEU CA C sing N N 224 LEU CA CB sing N N 225 LEU CA HA sing N N 226 LEU C O doub N N 227 LEU C OXT sing N N 228 LEU CB CG sing N N 229 LEU CB HB2 sing N N 230 LEU CB HB3 sing N N 231 LEU CG CD1 sing N N 232 LEU CG CD2 sing N N 233 LEU CG HG sing N N 234 LEU CD1 HD11 sing N N 235 LEU CD1 HD12 sing N N 236 LEU CD1 HD13 sing N N 237 LEU CD2 HD21 sing N N 238 LEU CD2 HD22 sing N N 239 LEU CD2 HD23 sing N N 240 LEU OXT HXT sing N N 241 LYS N CA sing N N 242 LYS N H sing N N 243 LYS N H2 sing N N 244 LYS CA C sing N N 245 LYS CA CB sing N N 246 LYS CA HA sing N N 247 LYS C O doub N N 248 LYS C OXT sing N N 249 LYS CB CG sing N N 250 LYS CB HB2 sing N N 251 LYS CB HB3 sing N N 252 LYS CG CD sing N N 253 LYS CG HG2 sing N N 254 LYS CG HG3 sing N N 255 LYS CD CE sing N N 256 LYS CD HD2 sing N N 257 LYS CD HD3 sing N N 258 LYS CE NZ sing N N 259 LYS CE HE2 sing N N 260 LYS CE HE3 sing N N 261 LYS NZ HZ1 sing N N 262 LYS NZ HZ2 sing N N 263 LYS NZ HZ3 sing N N 264 LYS OXT HXT sing N N 265 MET N CA sing N N 266 MET N H sing N N 267 MET N H2 sing N N 268 MET CA C sing N N 269 MET CA CB sing N N 270 MET CA HA sing N N 271 MET C O doub N N 272 MET C OXT sing N N 273 MET CB CG sing N N 274 MET CB HB2 sing N N 275 MET CB HB3 sing N N 276 MET CG SD sing N N 277 MET CG HG2 sing N N 278 MET CG HG3 sing N N 279 MET SD CE sing N N 280 MET CE HE1 sing N N 281 MET CE HE2 sing N N 282 MET CE HE3 sing N N 283 MET OXT HXT sing N N 284 PHE N CA sing N N 285 PHE N H sing N N 286 PHE N H2 sing N N 287 PHE CA C sing N N 288 PHE CA CB sing N N 289 PHE CA HA sing N N 290 PHE C O doub N N 291 PHE C OXT sing N N 292 PHE CB CG sing N N 293 PHE CB HB2 sing N N 294 PHE CB HB3 sing N N 295 PHE CG CD1 doub Y N 296 PHE CG CD2 sing Y N 297 PHE CD1 CE1 sing Y N 298 PHE CD1 HD1 sing N N 299 PHE CD2 CE2 doub Y N 300 PHE CD2 HD2 sing N N 301 PHE CE1 CZ doub Y N 302 PHE CE1 HE1 sing N N 303 PHE CE2 CZ sing Y N 304 PHE CE2 HE2 sing N N 305 PHE CZ HZ sing N N 306 PHE OXT HXT sing N N 307 PRO N CA sing N N 308 PRO N CD sing N N 309 PRO N H sing N N 310 PRO CA C sing N N 311 PRO CA CB sing N N 312 PRO CA HA sing N N 313 PRO C O doub N N 314 PRO C OXT sing N N 315 PRO CB CG sing N N 316 PRO CB HB2 sing N N 317 PRO CB HB3 sing N N 318 PRO CG CD sing N N 319 PRO CG HG2 sing N N 320 PRO CG HG3 sing N N 321 PRO CD HD2 sing N N 322 PRO CD HD3 sing N N 323 PRO OXT HXT sing N N 324 SER N CA sing N N 325 SER N H sing N N 326 SER N H2 sing N N 327 SER CA C sing N N 328 SER CA CB sing N N 329 SER CA HA sing N N 330 SER C O doub N N 331 SER C OXT sing N N 332 SER CB OG sing N N 333 SER CB HB2 sing N N 334 SER CB HB3 sing N N 335 SER OG HG sing N N 336 SER OXT HXT sing N N 337 THR N CA sing N N 338 THR N H sing N N 339 THR N H2 sing N N 340 THR CA C sing N N 341 THR CA CB sing N N 342 THR CA HA sing N N 343 THR C O doub N N 344 THR C OXT sing N N 345 THR CB OG1 sing N N 346 THR CB CG2 sing N N 347 THR CB HB sing N N 348 THR OG1 HG1 sing N N 349 THR CG2 HG21 sing N N 350 THR CG2 HG22 sing N N 351 THR CG2 HG23 sing N N 352 THR OXT HXT sing N N 353 TRP N CA sing N N 354 TRP N H sing N N 355 TRP N H2 sing N N 356 TRP CA C sing N N 357 TRP CA CB sing N N 358 TRP CA HA sing N N 359 TRP C O doub N N 360 TRP C OXT sing N N 361 TRP CB CG sing N N 362 TRP CB HB2 sing N N 363 TRP CB HB3 sing N N 364 TRP CG CD1 doub Y N 365 TRP CG CD2 sing Y N 366 TRP CD1 NE1 sing Y N 367 TRP CD1 HD1 sing N N 368 TRP CD2 CE2 doub Y N 369 TRP CD2 CE3 sing Y N 370 TRP NE1 CE2 sing Y N 371 TRP NE1 HE1 sing N N 372 TRP CE2 CZ2 sing Y N 373 TRP CE3 CZ3 doub Y N 374 TRP CE3 HE3 sing N N 375 TRP CZ2 CH2 doub Y N 376 TRP CZ2 HZ2 sing N N 377 TRP CZ3 CH2 sing Y N 378 TRP CZ3 HZ3 sing N N 379 TRP CH2 HH2 sing N N 380 TRP OXT HXT sing N N 381 TYR N CA sing N N 382 TYR N H sing N N 383 TYR N H2 sing N N 384 TYR CA C sing N N 385 TYR CA CB sing N N 386 TYR CA HA sing N N 387 TYR C O doub N N 388 TYR C OXT sing N N 389 TYR CB CG sing N N 390 TYR CB HB2 sing N N 391 TYR CB HB3 sing N N 392 TYR CG CD1 doub Y N 393 TYR CG CD2 sing Y N 394 TYR CD1 CE1 sing Y N 395 TYR CD1 HD1 sing N N 396 TYR CD2 CE2 doub Y N 397 TYR CD2 HD2 sing N N 398 TYR CE1 CZ doub Y N 399 TYR CE1 HE1 sing N N 400 TYR CE2 CZ sing Y N 401 TYR CE2 HE2 sing N N 402 TYR CZ OH sing N N 403 TYR OH HH sing N N 404 TYR OXT HXT sing N N 405 VAL N CA sing N N 406 VAL N H sing N N 407 VAL N H2 sing N N 408 VAL CA C sing N N 409 VAL CA CB sing N N 410 VAL CA HA sing N N 411 VAL C O doub N N 412 VAL C OXT sing N N 413 VAL CB CG1 sing N N 414 VAL CB CG2 sing N N 415 VAL CB HB sing N N 416 VAL CG1 HG11 sing N N 417 VAL CG1 HG12 sing N N 418 VAL CG1 HG13 sing N N 419 VAL CG2 HG21 sing N N 420 VAL CG2 HG22 sing N N 421 VAL CG2 HG23 sing N N 422 VAL OXT HXT sing N N 423 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '(2R,3R)-5,7-dihydroxy-2-(3,4,5-trihydroxyphenyl)-3,4-dihydro-2H-chromen-3-yl 3,4,5-trihydroxybenzoate' KDH 3 GLYCEROL GOL 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1BMZ _pdbx_initial_refinement_model.details 'PDB ENTRY 1BMZ' #