HEADER OXIDOREDUCTASE 11-JUN-10 3NGC TITLE COMPLEX OF 6-HYDROXY-L-NICOTINE OXIDASE WITH INTERMEDIATE TITLE 2 METHYLMYOSMINE PRODUCT FORMED DURING CATALYTIC TURNOVER COMPND MOL_ID: 1; COMPND 2 MOLECULE: 6-HYDROXY-L-NICOTINE OXIDASE; COMPND 3 CHAIN: X; COMPND 4 EC: 1.5.3.5; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARTHROBACTER NICOTINOVORANS; SOURCE 3 ORGANISM_TAXID: 29320; SOURCE 4 STRAIN: GRAM-POSITIVE SOIL BACTERIUM; SOURCE 5 GENE: 6-HLNO; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: JM105; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PTRC99A KEYWDS ENANTHIOMERIC SUBSTRATE-INHIBITOR, FLAVOENZYMES, NICOTINE KEYWDS 2 DEGRADATION, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR G.S.KACHALOVA,H.D.BARTUNIK REVDAT 5 21-FEB-24 3NGC 1 REMARK SEQADV REVDAT 4 08-NOV-17 3NGC 1 REMARK REVDAT 3 10-AUG-11 3NGC 1 JRNL VERSN REVDAT 2 06-APR-11 3NGC 1 CRYST1 REVDAT 1 23-MAR-11 3NGC 0 JRNL AUTH G.S.KACHALOVA,G.P.BOURENKOV,T.MENGESDORF,S.SCHENK,H.R.MAUN, JRNL AUTH 2 M.BURGHAMMER,C.RIEKEL,K.DECKER,H.D.BARTUNIK JRNL TITL CRYSTAL STRUCTURE ANALYSIS OF FREE AND SUBSTRATE-BOUND JRNL TITL 2 6-HYDROXY-L-NICOTINE OXIDASE FROM ARTHROBACTER JRNL TITL 3 NICOTINOVORANS. JRNL REF J.MOL.BIOL. V. 396 785 2010 JRNL REFN ISSN 0022-2836 JRNL PMID 20006620 JRNL DOI 10.1016/J.JMB.2009.12.009 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH G.S.KACHALOVA,G.P.BOURENKOV,T.MENGESDORF,S.SCHENK,H.R.MAUN, REMARK 1 AUTH 2 M.BURGHAMMER,C.RIEKEL,K.DECKER,H.D.BARTUNIK REMARK 1 TITL CRYSTAL STRUCTURE ANALYSIS OF FREE AND SUBSTRATE-BOUND REMARK 1 TITL 2 6-HYDROXY-L-NICOTINE FROM ARTHROBACTER NICOTINOVORANS REMARK 1 REF J.MOL.BIOL. V. 396 785 2010 REMARK 1 REFN ISSN 0022-2836 REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 12.22 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 32985 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1735 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.25 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.31 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2327 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.21 REMARK 3 BIN R VALUE (WORKING SET) : 0.2230 REMARK 3 BIN FREE R VALUE SET COUNT : 110 REMARK 3 BIN FREE R VALUE : 0.3380 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3272 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 122 REMARK 3 SOLVENT ATOMS : 458 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 34.45 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.179 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.116 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.542 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3521 ; 0.027 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4796 ; 2.203 ; 1.996 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 434 ; 7.046 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 156 ;39.322 ;23.590 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 531 ;16.529 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 25 ;19.058 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 525 ; 0.154 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2686 ; 0.013 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1774 ; 0.232 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2412 ; 0.330 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 353 ; 0.185 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 74 ; 0.367 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 31 ; 0.237 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2195 ; 1.537 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3427 ; 2.276 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1575 ; 4.097 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1367 ; 6.053 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL PARAMETERS FOR MASK CACLULATION REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : NULL REMARK 3 ION PROBE RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3NGC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-JUN-10. REMARK 100 THE DEPOSITION ID IS D_1000059793. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-MAR-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MPG/DESY, HAMBURG REMARK 200 BEAMLINE : BW6 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.05 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34405 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : 0.11200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.72500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20MM SODIUM PHOSPHATE; 4M SODIUM REMARK 280 FORMIATE, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 4 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 Y,X,-Z REMARK 290 14555 -Y,-X,-Z REMARK 290 15555 Y,-X,Z REMARK 290 16555 -Y,X,Z REMARK 290 17555 X,Z,-Y REMARK 290 18555 -X,Z,Y REMARK 290 19555 -X,-Z,-Y REMARK 290 20555 X,-Z,Y REMARK 290 21555 Z,Y,-X REMARK 290 22555 Z,-Y,X REMARK 290 23555 -Z,Y,X REMARK 290 24555 -Z,-Y,-X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 162.76600 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS X 426 REMARK 465 HIS X 427 REMARK 465 HIS X 428 REMARK 465 HIS X 429 REMARK 465 HIS X 430 REMARK 465 HIS X 431 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG X 62 O HOH X 520 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG X 91 NH2 ARG X 91 24555 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO X 49 128.50 -36.58 REMARK 500 ALA X 58 -38.19 -138.71 REMARK 500 THR X 86 -31.41 -140.95 REMARK 500 ARG X 91 79.60 -117.84 REMARK 500 GLN X 134 18.70 -144.71 REMARK 500 HIS X 187 43.37 -90.54 REMARK 500 HIS X 244 171.78 -53.00 REMARK 500 TYR X 313 -65.59 -132.33 REMARK 500 THR X 327 -154.93 -150.67 REMARK 500 PHE X 367 -53.71 -140.65 REMARK 500 PRO X 370 -136.34 -82.32 REMARK 500 HIS X 383 -71.99 -140.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 GP7 X 435 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HNL X 433 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD X 434 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GP7 X 435 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HNH X 436 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3NH3 RELATED DB: PDB REMARK 900 RELATED ID: 3NHO RELATED DB: PDB REMARK 900 RELATED ID: 3NK0 RELATED DB: PDB REMARK 900 RELATED ID: 3NK1 RELATED DB: PDB REMARK 900 RELATED ID: 3NK2 RELATED DB: PDB REMARK 900 RELATED ID: 3NN0 RELATED DB: PDB REMARK 900 RELATED ID: 3NN6 RELATED DB: PDB REMARK 900 RELATED ID: 3K7M RELATED DB: PDB REMARK 900 RELATED ID: 3K7Q RELATED DB: PDB DBREF 3NGC X 1 425 UNP Q93NH4 Q93NH4_ARTNI 1 425 SEQADV 3NGC HIS X 426 UNP Q93NH4 EXPRESSION TAG SEQADV 3NGC HIS X 427 UNP Q93NH4 EXPRESSION TAG SEQADV 3NGC HIS X 428 UNP Q93NH4 EXPRESSION TAG SEQADV 3NGC HIS X 429 UNP Q93NH4 EXPRESSION TAG SEQADV 3NGC HIS X 430 UNP Q93NH4 EXPRESSION TAG SEQADV 3NGC HIS X 431 UNP Q93NH4 EXPRESSION TAG SEQRES 1 X 431 MET TYR ASP ALA ILE VAL VAL GLY GLY GLY PHE SER GLY SEQRES 2 X 431 LEU LYS ALA ALA ARG ASP LEU THR ASN ALA GLY LYS LYS SEQRES 3 X 431 VAL LEU LEU LEU GLU GLY GLY GLU ARG LEU GLY GLY ARG SEQRES 4 X 431 ALA TYR SER ARG GLU SER ARG ASN VAL PRO GLY LEU ARG SEQRES 5 X 431 VAL GLU ILE GLY GLY ALA TYR LEU HIS ARG LYS HIS HIS SEQRES 6 X 431 PRO ARG LEU ALA ALA GLU LEU ASP ARG TYR GLY ILE PRO SEQRES 7 X 431 THR ALA ALA ALA SER GLU PHE THR SER PHE ARG HIS ARG SEQRES 8 X 431 LEU GLY PRO THR ALA VAL ASP GLN ALA PHE PRO ILE PRO SEQRES 9 X 431 GLY SER GLU ALA VAL ALA VAL GLU ALA ALA THR TYR THR SEQRES 10 X 431 LEU LEU ARG ASP ALA HIS ARG ILE ASP LEU GLU LYS GLY SEQRES 11 X 431 LEU GLU ASN GLN ASP LEU GLU ASP LEU ASP ILE PRO LEU SEQRES 12 X 431 ASN GLU TYR VAL ASP LYS LEU ASP LEU PRO PRO VAL SER SEQRES 13 X 431 ARG GLN PHE LEU LEU ALA TRP ALA TRP ASN MET LEU GLY SEQRES 14 X 431 GLN PRO ALA ASP GLN ALA SER ALA LEU TRP MET LEU GLN SEQRES 15 X 431 LEU VAL ALA ALA HIS HIS TYR SER ILE LEU GLY VAL VAL SEQRES 16 X 431 LEU SER LEU ASP GLU VAL PHE SER ASN GLY SER ALA ASP SEQRES 17 X 431 LEU VAL ASP ALA MET SER GLN GLU ILE PRO GLU ILE ARG SEQRES 18 X 431 LEU GLN THR VAL VAL THR GLY ILE ASP GLN SER GLY ASP SEQRES 19 X 431 VAL VAL ASN VAL THR VAL LYS ASP GLY HIS ALA PHE GLN SEQRES 20 X 431 ALA HIS SER VAL ILE VAL ALA THR PRO MET ASN THR TRP SEQRES 21 X 431 ARG ARG ILE VAL PHE THR PRO ALA LEU PRO GLU ARG ARG SEQRES 22 X 431 ARG SER VAL ILE GLU GLU GLY HIS GLY GLY GLN GLY LEU SEQRES 23 X 431 LYS ILE LEU ILE HIS VAL ARG GLY ALA GLU ALA GLY ILE SEQRES 24 X 431 GLU CYS VAL GLY ASP GLY ILE PHE PRO THR LEU TYR ASP SEQRES 25 X 431 TYR CYS GLU VAL SER GLU SER GLU ARG LEU LEU VAL ALA SEQRES 26 X 431 PHE THR ASP SER GLY SER PHE ASP PRO THR ASP ILE GLY SEQRES 27 X 431 ALA VAL LYS ASP ALA VAL LEU TYR TYR LEU PRO GLU VAL SEQRES 28 X 431 GLU VAL LEU GLY ILE ASP TYR HIS ASP TRP ILE ALA ASP SEQRES 29 X 431 PRO LEU PHE GLU GLY PRO TRP VAL ALA PRO ARG VAL GLY SEQRES 30 X 431 GLN PHE SER ARG VAL HIS LYS GLU LEU GLY GLU PRO ALA SEQRES 31 X 431 GLY ARG ILE HIS PHE VAL GLY SER ASP VAL SER LEU GLU SEQRES 32 X 431 PHE PRO GLY TYR ILE GLU GLY ALA LEU GLU THR ALA GLU SEQRES 33 X 431 CYS ALA VAL ASN ALA ILE LEU HIS SER HIS HIS HIS HIS SEQRES 34 X 431 HIS HIS HET HNL X 433 13 HET FAD X 434 53 HET GP7 X 435 43 HET HNH X 436 13 HETNAM HNL 5-[(2S)-1-METHYLPYRROLIDIN-2-YL]PYRIDIN-2-OL HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM GP7 (1R)-2-{[(S)-(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1- HETNAM 2 GP7 [(PENTADECANOYLOXY)METHYL]ETHYL (12E)-HEXADECA-9,12- HETNAM 3 GP7 DIENOATE HETNAM HNH 5-(1-METHYL-4,5-DIHYDRO-1H-PYRROL-2-YL)PYRIDIN-2-OL HETSYN HNL 6-HYDROXY-L-NICOTINE HETSYN GP7 1-PENTADECANOYL-2-HEXADECANOYL-SN-GLYCERO-3- HETSYN 2 GP7 PHOSPHOETHANOLAMINE HETSYN HNH 6-HYDROXY-N-METHYL-MYOSMINE FORMUL 2 HNL C10 H14 N2 O FORMUL 3 FAD C27 H33 N9 O15 P2 FORMUL 4 GP7 C36 H68 N O8 P FORMUL 5 HNH C10 H12 N2 O FORMUL 6 HOH *458(H2 O) HELIX 1 1 GLY X 10 ALA X 23 1 14 HELIX 2 2 HIS X 65 GLY X 76 1 12 HELIX 3 3 PRO X 104 SER X 106 5 3 HELIX 4 4 GLU X 107 HIS X 123 1 17 HELIX 5 5 PRO X 142 ASP X 151 1 10 HELIX 6 6 PRO X 153 GLY X 169 1 17 HELIX 7 7 SER X 176 HIS X 187 1 12 HELIX 8 8 SER X 190 SER X 197 1 8 HELIX 9 9 GLY X 205 GLN X 215 1 11 HELIX 10 10 PRO X 256 ILE X 263 5 8 HELIX 11 11 PRO X 270 GLY X 280 1 11 HELIX 12 12 ASP X 336 LEU X 348 1 13 HELIX 13 13 GLY X 377 VAL X 382 1 6 HELIX 14 14 HIS X 383 GLU X 388 5 6 HELIX 15 15 GLY X 397 SER X 401 5 5 HELIX 16 16 TYR X 407 HIS X 424 1 18 SHEET 1 A 7 ILE X 220 ARG X 221 0 SHEET 2 A 7 VAL X 27 LEU X 30 1 N LEU X 29 O ARG X 221 SHEET 3 A 7 TYR X 2 VAL X 7 1 N VAL X 6 O LEU X 28 SHEET 4 A 7 PHE X 246 VAL X 253 1 O ILE X 252 N ILE X 5 SHEET 5 A 7 VAL X 236 VAL X 240 -1 N VAL X 238 O PHE X 246 SHEET 6 A 7 VAL X 226 ASP X 230 -1 N ASP X 230 O ASN X 237 SHEET 7 A 7 VAL X 264 THR X 266 1 O VAL X 264 N THR X 227 SHEET 1 B 5 ILE X 220 ARG X 221 0 SHEET 2 B 5 VAL X 27 LEU X 30 1 N LEU X 29 O ARG X 221 SHEET 3 B 5 TYR X 2 VAL X 7 1 N VAL X 6 O LEU X 28 SHEET 4 B 5 PHE X 246 VAL X 253 1 O ILE X 252 N ILE X 5 SHEET 5 B 5 ILE X 393 PHE X 395 1 O HIS X 394 N VAL X 253 SHEET 1 C 2 SER X 42 GLU X 44 0 SHEET 2 C 2 ARG X 52 GLU X 54 -1 O VAL X 53 N ARG X 43 SHEET 1 D 3 TYR X 59 LEU X 60 0 SHEET 2 D 3 GLU X 200 PHE X 202 -1 O GLU X 200 N LEU X 60 SHEET 3 D 3 THR X 79 ALA X 80 -1 N ALA X 80 O VAL X 201 SHEET 1 E 6 SER X 87 PHE X 88 0 SHEET 2 E 6 ILE X 299 VAL X 302 1 O GLU X 300 N SER X 87 SHEET 3 E 6 THR X 309 GLU X 315 -1 O ASP X 312 N ILE X 299 SHEET 4 E 6 GLU X 320 ASP X 328 -1 O VAL X 324 N TYR X 311 SHEET 5 E 6 GLY X 285 ARG X 293 -1 N ILE X 288 O ALA X 325 SHEET 6 E 6 GLU X 352 ASP X 357 -1 O ASP X 357 N LEU X 289 CISPEP 1 THR X 266 PRO X 267 0 -3.74 SITE 1 AC1 9 ASN X 166 MET X 167 LEU X 198 TYR X 311 SITE 2 AC1 9 PHE X 326 TRP X 371 GLY X 406 TYR X 407 SITE 3 AC1 9 FAD X 434 SITE 1 AC2 39 GLY X 8 GLY X 10 PHE X 11 SER X 12 SITE 2 AC2 39 GLU X 31 GLY X 32 GLY X 37 GLY X 38 SITE 3 AC2 39 ARG X 39 GLY X 56 GLY X 57 ALA X 58 SITE 4 AC2 39 TYR X 59 THR X 224 VAL X 225 VAL X 226 SITE 5 AC2 39 ALA X 254 THR X 255 PRO X 256 TRP X 361 SITE 6 AC2 39 LEU X 366 PHE X 367 PRO X 370 TRP X 371 SITE 7 AC2 39 GLY X 397 SER X 398 GLY X 406 TYR X 407 SITE 8 AC2 39 ILE X 408 HNL X 433 HOH X 448 HOH X 450 SITE 9 AC2 39 HOH X 469 HOH X 476 HOH X 505 HOH X 530 SITE 10 AC2 39 HOH X 746 HOH X1008 HOH X1011 SITE 1 AC3 9 ALA X 100 PRO X 104 GLY X 105 THR X 115 SITE 2 AC3 9 PHE X 159 HNH X 436 HOH X 733 HOH X1032 SITE 3 AC3 9 HOH X1193 SITE 1 AC4 7 TYR X 59 PHE X 85 VAL X 195 LEU X 198 SITE 2 AC4 7 GLU X 300 TYR X 311 GP7 X 435 CRYST1 162.766 162.766 162.766 90.00 90.00 90.00 P 4 3 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006144 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006144 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006144 0.00000