HEADER ISOMERASE 11-JUN-10 3NGF TITLE CRYSTAL STRUCTURE OF AP ENDONUCLEASE, FAMILY 2 FROM BRUCELLA TITLE 2 MELITENSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: AP ENDONUCLEASE, FAMILY 2; COMPND 3 CHAIN: A, B; COMPND 4 EC: 5.3.1.22; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BRUCELLA MELITENSIS BIOVAR ABORTUS; SOURCE 3 ORGANISM_TAXID: 359391; SOURCE 4 STRAIN: 2308; SOURCE 5 GENE: BAB2_0144; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: BG1861 KEYWDS STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 2 INFECTIOUS DISEASE, SSGCID, TIM BARREL, AP NUCLEASE, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 3 06-SEP-23 3NGF 1 REMARK SEQADV LINK REVDAT 2 13-JUL-11 3NGF 1 VERSN REVDAT 1 07-JUL-10 3NGF 0 JRNL AUTH B.STAKER,T.EDWARDS,J.BULLEN,M.DIETERICH, JRNL AUTH 2 SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE JRNL AUTH 3 (SSGCID) JRNL TITL CRYSTAL STRUCTURE OF AP ENDONUCLEASE, FAMILY 2 FROM BRUCELLA JRNL TITL 2 MELITENSIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.01 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 55914 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.143 REMARK 3 R VALUE (WORKING SET) : 0.141 REMARK 3 FREE R VALUE : 0.176 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2836 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3649 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.22 REMARK 3 BIN R VALUE (WORKING SET) : 0.2250 REMARK 3 BIN FREE R VALUE SET COUNT : 203 REMARK 3 BIN FREE R VALUE : 0.2550 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4120 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 38 REMARK 3 SOLVENT ATOMS : 595 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.44 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.19000 REMARK 3 B22 (A**2) : 0.34000 REMARK 3 B33 (A**2) : -4.53000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 6.95000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.021 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.059 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.379 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4417 ; 0.013 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 3012 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6006 ; 1.315 ; 1.950 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7272 ; 0.916 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 550 ; 5.538 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 233 ;28.201 ;23.476 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 693 ;10.894 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 38 ;15.288 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 621 ; 0.081 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5096 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 980 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2678 ; 0.637 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1080 ; 0.200 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4311 ; 1.078 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1739 ; 1.847 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1695 ; 2.868 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 24 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 34 REMARK 3 ORIGIN FOR THE GROUP (A): -34.6370 1.5196 -6.9346 REMARK 3 T TENSOR REMARK 3 T11: 0.0409 T22: 0.0148 REMARK 3 T33: 0.0663 T12: -0.0274 REMARK 3 T13: -0.0384 T23: 0.0102 REMARK 3 L TENSOR REMARK 3 L11: 0.6730 L22: 2.1257 REMARK 3 L33: 3.0520 L12: 0.4991 REMARK 3 L13: -0.5931 L23: -1.2859 REMARK 3 S TENSOR REMARK 3 S11: -0.0365 S12: 0.0817 S13: -0.0063 REMARK 3 S21: -0.1602 S22: 0.0963 S23: 0.0744 REMARK 3 S31: 0.1240 S32: -0.1424 S33: -0.0598 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 35 A 47 REMARK 3 ORIGIN FOR THE GROUP (A): -24.0656 10.4953 -7.4742 REMARK 3 T TENSOR REMARK 3 T11: 0.0842 T22: 0.1359 REMARK 3 T33: 0.0828 T12: -0.0244 REMARK 3 T13: -0.0102 T23: 0.0024 REMARK 3 L TENSOR REMARK 3 L11: 2.2120 L22: 2.6119 REMARK 3 L33: 1.7738 L12: -1.5985 REMARK 3 L13: 1.8986 L23: -2.2572 REMARK 3 S TENSOR REMARK 3 S11: 0.0475 S12: 0.2333 S13: 0.0480 REMARK 3 S21: 0.0624 S22: -0.1439 S23: 0.0017 REMARK 3 S31: -0.1005 S32: 0.2461 S33: 0.0964 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 48 A 66 REMARK 3 ORIGIN FOR THE GROUP (A): -28.0507 7.5105 -2.9845 REMARK 3 T TENSOR REMARK 3 T11: 0.0644 T22: 0.0408 REMARK 3 T33: 0.0864 T12: -0.0276 REMARK 3 T13: -0.0232 T23: -0.0024 REMARK 3 L TENSOR REMARK 3 L11: 1.4943 L22: 0.3109 REMARK 3 L33: 1.7227 L12: -0.2531 REMARK 3 L13: 0.2541 L23: -0.4783 REMARK 3 S TENSOR REMARK 3 S11: -0.0228 S12: -0.0147 S13: 0.0402 REMARK 3 S21: -0.0494 S22: 0.0705 S23: 0.0389 REMARK 3 S31: -0.0481 S32: -0.0186 S33: -0.0477 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 67 A 109 REMARK 3 ORIGIN FOR THE GROUP (A): -15.7094 7.0915 4.3957 REMARK 3 T TENSOR REMARK 3 T11: 0.0165 T22: 0.0685 REMARK 3 T33: 0.0406 T12: -0.0113 REMARK 3 T13: -0.0123 T23: -0.0140 REMARK 3 L TENSOR REMARK 3 L11: 1.5714 L22: 1.1423 REMARK 3 L33: 1.1288 L12: 0.0088 REMARK 3 L13: 0.2252 L23: -0.4559 REMARK 3 S TENSOR REMARK 3 S11: -0.0118 S12: 0.0104 S13: 0.0245 REMARK 3 S21: -0.0521 S22: 0.0135 S23: -0.1093 REMARK 3 S31: -0.0430 S32: 0.2101 S33: -0.0018 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 110 A 128 REMARK 3 ORIGIN FOR THE GROUP (A): -9.9790 1.1566 15.1811 REMARK 3 T TENSOR REMARK 3 T11: 0.0192 T22: 0.1487 REMARK 3 T33: 0.0823 T12: 0.0088 REMARK 3 T13: -0.0521 T23: 0.0095 REMARK 3 L TENSOR REMARK 3 L11: 3.6598 L22: 5.1156 REMARK 3 L33: 2.6540 L12: -1.3340 REMARK 3 L13: -0.3031 L23: 0.8000 REMARK 3 S TENSOR REMARK 3 S11: 0.0216 S12: -0.1699 S13: -0.0808 REMARK 3 S21: 0.2975 S22: -0.0206 S23: -0.3549 REMARK 3 S31: 0.1339 S32: 0.4075 S33: -0.0010 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 129 A 155 REMARK 3 ORIGIN FOR THE GROUP (A): -20.0480 0.1042 9.3176 REMARK 3 T TENSOR REMARK 3 T11: 0.0273 T22: 0.0315 REMARK 3 T33: 0.0681 T12: 0.0009 REMARK 3 T13: -0.0156 T23: -0.0032 REMARK 3 L TENSOR REMARK 3 L11: 0.6137 L22: 2.6955 REMARK 3 L33: 1.1188 L12: 0.0727 REMARK 3 L13: -0.2186 L23: 0.4162 REMARK 3 S TENSOR REMARK 3 S11: -0.0470 S12: -0.0181 S13: -0.0294 REMARK 3 S21: -0.0520 S22: 0.0973 S23: -0.1884 REMARK 3 S31: 0.0411 S32: 0.1293 S33: -0.0503 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 156 A 168 REMARK 3 ORIGIN FOR THE GROUP (A): -19.9967 -2.2903 19.9281 REMARK 3 T TENSOR REMARK 3 T11: 0.0506 T22: 0.0674 REMARK 3 T33: 0.0609 T12: 0.0145 REMARK 3 T13: -0.0297 T23: 0.0101 REMARK 3 L TENSOR REMARK 3 L11: 1.5106 L22: 4.4683 REMARK 3 L33: 2.1111 L12: 1.2007 REMARK 3 L13: 0.2046 L23: 1.0914 REMARK 3 S TENSOR REMARK 3 S11: 0.0477 S12: -0.1040 S13: -0.1350 REMARK 3 S21: 0.2940 S22: -0.0272 S23: -0.1270 REMARK 3 S31: 0.1832 S32: 0.1489 S33: -0.0205 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 169 A 195 REMARK 3 ORIGIN FOR THE GROUP (A): -28.4994 -6.8110 14.7323 REMARK 3 T TENSOR REMARK 3 T11: 0.0823 T22: 0.0237 REMARK 3 T33: 0.0984 T12: -0.0004 REMARK 3 T13: -0.0066 T23: 0.0075 REMARK 3 L TENSOR REMARK 3 L11: 0.2552 L22: 2.6666 REMARK 3 L33: 0.2234 L12: 0.4683 REMARK 3 L13: -0.0073 L23: 0.2926 REMARK 3 S TENSOR REMARK 3 S11: 0.0001 S12: -0.0661 S13: -0.0306 REMARK 3 S21: 0.1171 S22: -0.0244 S23: 0.0919 REMARK 3 S31: 0.0966 S32: 0.0599 S33: 0.0242 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 196 A 213 REMARK 3 ORIGIN FOR THE GROUP (A): -32.0555 -7.8427 5.8734 REMARK 3 T TENSOR REMARK 3 T11: 0.0811 T22: -0.0006 REMARK 3 T33: 0.0843 T12: -0.0056 REMARK 3 T13: -0.0107 T23: 0.0197 REMARK 3 L TENSOR REMARK 3 L11: 1.0980 L22: 1.3511 REMARK 3 L33: 2.1785 L12: 0.7691 REMARK 3 L13: 0.3131 L23: 0.6242 REMARK 3 S TENSOR REMARK 3 S11: -0.0634 S12: -0.0006 S13: 0.0237 REMARK 3 S21: -0.0416 S22: 0.0097 S23: 0.1344 REMARK 3 S31: 0.1446 S32: -0.0929 S33: 0.0538 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 214 A 230 REMARK 3 ORIGIN FOR THE GROUP (A): -39.8754 -10.6913 9.9127 REMARK 3 T TENSOR REMARK 3 T11: 0.0571 T22: 0.0051 REMARK 3 T33: 0.1376 T12: -0.0217 REMARK 3 T13: -0.0036 T23: 0.0263 REMARK 3 L TENSOR REMARK 3 L11: 1.0377 L22: 4.0800 REMARK 3 L33: 2.1386 L12: 0.1437 REMARK 3 L13: -0.0123 L23: 0.3395 REMARK 3 S TENSOR REMARK 3 S11: -0.0135 S12: 0.0414 S13: 0.1237 REMARK 3 S21: 0.1135 S22: -0.0109 S23: 0.4211 REMARK 3 S31: 0.1132 S32: -0.1409 S33: 0.0244 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 231 A 244 REMARK 3 ORIGIN FOR THE GROUP (A): -35.3566 -3.7840 2.6896 REMARK 3 T TENSOR REMARK 3 T11: 0.0494 T22: 0.0092 REMARK 3 T33: 0.0821 T12: -0.0191 REMARK 3 T13: -0.0221 T23: 0.0099 REMARK 3 L TENSOR REMARK 3 L11: 1.1148 L22: 3.4151 REMARK 3 L33: 5.3999 L12: -0.3566 REMARK 3 L13: -0.9614 L23: 1.9204 REMARK 3 S TENSOR REMARK 3 S11: -0.0684 S12: 0.0042 S13: 0.0106 REMARK 3 S21: 0.0506 S22: 0.0380 S23: 0.1810 REMARK 3 S31: 0.1717 S32: -0.2216 S33: 0.0304 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 245 A 257 REMARK 3 ORIGIN FOR THE GROUP (A): -43.1517 -5.8160 -4.5486 REMARK 3 T TENSOR REMARK 3 T11: 0.0592 T22: 0.0673 REMARK 3 T33: 0.1353 T12: -0.0689 REMARK 3 T13: -0.0924 T23: 0.0536 REMARK 3 L TENSOR REMARK 3 L11: 8.1054 L22: 3.0638 REMARK 3 L33: 7.4710 L12: 0.1956 REMARK 3 L13: -3.3553 L23: 1.1953 REMARK 3 S TENSOR REMARK 3 S11: -0.0638 S12: 0.0326 S13: 0.0741 REMARK 3 S21: -0.4470 S22: 0.1465 S23: 0.5325 REMARK 3 S31: 0.1626 S32: -0.6254 S33: -0.0827 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 0 B 34 REMARK 3 ORIGIN FOR THE GROUP (A): -48.8797 -37.3983 21.2489 REMARK 3 T TENSOR REMARK 3 T11: 0.0307 T22: 0.0222 REMARK 3 T33: 0.1014 T12: 0.0193 REMARK 3 T13: -0.0317 T23: 0.0270 REMARK 3 L TENSOR REMARK 3 L11: 1.7148 L22: 2.2525 REMARK 3 L33: 2.2416 L12: 0.5594 REMARK 3 L13: -0.9262 L23: -0.7624 REMARK 3 S TENSOR REMARK 3 S11: 0.0388 S12: 0.0386 S13: 0.0925 REMARK 3 S21: 0.0214 S22: 0.0509 S23: 0.1973 REMARK 3 S31: -0.0543 S32: -0.1116 S33: -0.0897 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 35 B 47 REMARK 3 ORIGIN FOR THE GROUP (A): -43.1940 -46.0700 31.2469 REMARK 3 T TENSOR REMARK 3 T11: 0.0920 T22: 0.1486 REMARK 3 T33: 0.1012 T12: 0.0162 REMARK 3 T13: -0.0021 T23: 0.0251 REMARK 3 L TENSOR REMARK 3 L11: 3.4553 L22: 3.1631 REMARK 3 L33: -0.1919 L12: 1.9454 REMARK 3 L13: 0.5168 L23: 0.0154 REMARK 3 S TENSOR REMARK 3 S11: 0.0418 S12: -0.4494 S13: -0.0381 REMARK 3 S21: 0.0900 S22: -0.1505 S23: -0.0199 REMARK 3 S31: 0.0611 S32: -0.0165 S33: 0.1087 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 48 B 66 REMARK 3 ORIGIN FOR THE GROUP (A): -41.9644 -43.3735 24.9493 REMARK 3 T TENSOR REMARK 3 T11: 0.0494 T22: 0.0232 REMARK 3 T33: 0.0702 T12: 0.0232 REMARK 3 T13: -0.0193 T23: 0.0135 REMARK 3 L TENSOR REMARK 3 L11: 3.4369 L22: 1.0142 REMARK 3 L33: 1.6140 L12: 1.2423 REMARK 3 L13: 0.7170 L23: 0.3622 REMARK 3 S TENSOR REMARK 3 S11: -0.0439 S12: 0.0498 S13: -0.0235 REMARK 3 S21: -0.0081 S22: 0.0587 S23: 0.0840 REMARK 3 S31: 0.0840 S32: 0.0034 S33: -0.0148 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 67 B 112 REMARK 3 ORIGIN FOR THE GROUP (A): -28.1892 -41.8197 30.8802 REMARK 3 T TENSOR REMARK 3 T11: 0.0237 T22: 0.0562 REMARK 3 T33: 0.0314 T12: 0.0252 REMARK 3 T13: -0.0155 T23: -0.0097 REMARK 3 L TENSOR REMARK 3 L11: 1.8074 L22: 1.4708 REMARK 3 L33: 1.0899 L12: 0.4136 REMARK 3 L13: 0.3470 L23: -0.2454 REMARK 3 S TENSOR REMARK 3 S11: -0.0427 S12: -0.1925 S13: 0.0067 REMARK 3 S21: 0.1215 S22: 0.0512 S23: -0.0471 REMARK 3 S31: -0.0317 S32: 0.0850 S33: -0.0086 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 113 B 128 REMARK 3 ORIGIN FOR THE GROUP (A): -16.4525 -38.1119 27.8615 REMARK 3 T TENSOR REMARK 3 T11: 0.0168 T22: 0.1351 REMARK 3 T33: 0.0931 T12: -0.0020 REMARK 3 T13: -0.0390 T23: -0.0227 REMARK 3 L TENSOR REMARK 3 L11: 2.3085 L22: 5.4849 REMARK 3 L33: 2.3391 L12: 0.1548 REMARK 3 L13: 0.5871 L23: 2.2518 REMARK 3 S TENSOR REMARK 3 S11: 0.0163 S12: -0.0818 S13: 0.1115 REMARK 3 S21: 0.1124 S22: 0.1015 S23: -0.4874 REMARK 3 S31: -0.0179 S32: 0.3637 S33: -0.1178 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 129 B 149 REMARK 3 ORIGIN FOR THE GROUP (A): -28.2201 -38.3298 23.0116 REMARK 3 T TENSOR REMARK 3 T11: 0.0348 T22: 0.0290 REMARK 3 T33: 0.0655 T12: 0.0006 REMARK 3 T13: -0.0155 T23: -0.0045 REMARK 3 L TENSOR REMARK 3 L11: 0.5260 L22: 5.6291 REMARK 3 L33: 1.1263 L12: -0.7283 REMARK 3 L13: -0.3023 L23: 0.7437 REMARK 3 S TENSOR REMARK 3 S11: -0.0716 S12: -0.0575 S13: 0.0043 REMARK 3 S21: 0.2541 S22: 0.0864 S23: 0.0414 REMARK 3 S31: 0.0506 S32: 0.0686 S33: -0.0149 REMARK 3 REMARK 3 TLS GROUP : 19 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 150 B 168 REMARK 3 ORIGIN FOR THE GROUP (A): -20.6201 -31.4628 21.2148 REMARK 3 T TENSOR REMARK 3 T11: 0.0539 T22: 0.0469 REMARK 3 T33: 0.1091 T12: -0.0173 REMARK 3 T13: -0.0189 T23: -0.0150 REMARK 3 L TENSOR REMARK 3 L11: 1.7926 L22: 1.8319 REMARK 3 L33: 1.1548 L12: -0.8482 REMARK 3 L13: -0.0593 L23: -0.3616 REMARK 3 S TENSOR REMARK 3 S11: 0.0772 S12: 0.0105 S13: 0.2062 REMARK 3 S21: -0.0570 S22: -0.0485 S23: -0.2759 REMARK 3 S31: -0.1824 S32: 0.1376 S33: -0.0287 REMARK 3 REMARK 3 TLS GROUP : 20 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 169 B 193 REMARK 3 ORIGIN FOR THE GROUP (A): -28.3626 -28.9170 14.5107 REMARK 3 T TENSOR REMARK 3 T11: 0.0937 T22: 0.0434 REMARK 3 T33: 0.0949 T12: -0.0053 REMARK 3 T13: -0.0131 T23: 0.0060 REMARK 3 L TENSOR REMARK 3 L11: 0.3614 L22: 1.9503 REMARK 3 L33: 0.1385 L12: -0.3451 REMARK 3 L13: -0.0125 L23: 0.0845 REMARK 3 S TENSOR REMARK 3 S11: 0.0296 S12: 0.0141 S13: 0.0833 REMARK 3 S21: -0.0419 S22: -0.0087 S23: -0.0369 REMARK 3 S31: -0.0723 S32: 0.0968 S33: -0.0208 REMARK 3 REMARK 3 TLS GROUP : 21 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 194 B 213 REMARK 3 ORIGIN FOR THE GROUP (A): -35.7928 -28.1668 15.4853 REMARK 3 T TENSOR REMARK 3 T11: 0.0789 T22: -0.0011 REMARK 3 T33: 0.0724 T12: -0.0098 REMARK 3 T13: -0.0149 T23: 0.0120 REMARK 3 L TENSOR REMARK 3 L11: 2.6583 L22: 2.0100 REMARK 3 L33: 0.7666 L12: -1.4013 REMARK 3 L13: -0.6852 L23: 0.1228 REMARK 3 S TENSOR REMARK 3 S11: 0.1064 S12: 0.0951 S13: 0.0658 REMARK 3 S21: -0.0795 S22: -0.0201 S23: 0.0637 REMARK 3 S31: -0.0657 S32: -0.0212 S33: -0.0863 REMARK 3 REMARK 3 TLS GROUP : 22 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 214 B 232 REMARK 3 ORIGIN FOR THE GROUP (A): -38.0745 -26.4213 7.4952 REMARK 3 T TENSOR REMARK 3 T11: 0.1145 T22: 0.0170 REMARK 3 T33: 0.0875 T12: -0.0047 REMARK 3 T13: -0.0251 T23: 0.0142 REMARK 3 L TENSOR REMARK 3 L11: 1.3898 L22: 3.8531 REMARK 3 L33: 0.2313 L12: -0.7812 REMARK 3 L13: -0.4282 L23: -0.4707 REMARK 3 S TENSOR REMARK 3 S11: 0.0668 S12: 0.1126 S13: -0.0123 REMARK 3 S21: -0.3664 S22: -0.0063 S23: 0.1308 REMARK 3 S31: 0.0620 S32: -0.0750 S33: -0.0605 REMARK 3 REMARK 3 TLS GROUP : 23 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 233 B 249 REMARK 3 ORIGIN FOR THE GROUP (A): -46.3641 -30.5133 17.8915 REMARK 3 T TENSOR REMARK 3 T11: 0.0545 T22: 0.0152 REMARK 3 T33: 0.1162 T12: -0.0011 REMARK 3 T13: -0.0198 T23: 0.0480 REMARK 3 L TENSOR REMARK 3 L11: 3.1682 L22: 3.0615 REMARK 3 L33: 2.7748 L12: -1.3216 REMARK 3 L13: -1.1981 L23: 0.9425 REMARK 3 S TENSOR REMARK 3 S11: 0.0233 S12: 0.0754 S13: 0.1519 REMARK 3 S21: -0.0582 S22: 0.1258 S23: 0.1483 REMARK 3 S31: -0.1174 S32: -0.1620 S33: -0.1491 REMARK 3 REMARK 3 TLS GROUP : 24 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 250 B 257 REMARK 3 ORIGIN FOR THE GROUP (A): -50.6412 -31.1775 10.1108 REMARK 3 T TENSOR REMARK 3 T11: 0.0674 T22: 0.0841 REMARK 3 T33: 0.1154 T12: -0.0075 REMARK 3 T13: -0.0902 T23: 0.0552 REMARK 3 L TENSOR REMARK 3 L11: 19.5751 L22: 3.3530 REMARK 3 L33: 20.5160 L12: -0.7298 REMARK 3 L13: -2.6100 L23: -0.4183 REMARK 3 S TENSOR REMARK 3 S11: 0.1686 S12: 0.8837 S13: -0.2062 REMARK 3 S21: -0.3656 S22: -0.0550 S23: 0.4631 REMARK 3 S31: 0.5083 S32: 0.0512 S33: -0.1136 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 4 REMARK 4 3NGF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-JUN-10. REMARK 100 THE DEPOSITION ID IS D_1000059796. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-MAY-10 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E+ SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54178 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 55966 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 45.910 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.04500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.4600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1K77 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.04 M KH2PO4, 16% PEG 8000, 20% REMARK 280 GLYCEROL, 27 MG/ML PROTEIN, JCSG+ SCREEN WELL D12, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 60.32000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 GLN A 259 REMARK 465 SER A 260 REMARK 465 ALA A 261 REMARK 465 MET B -7 REMARK 465 ALA B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 GLN B 259 REMARK 465 SER B 260 REMARK 465 ALA B 261 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 ASP B 258 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 298 O HOH A 574 1.89 REMARK 500 O HOH A 583 O HOH B 390 1.92 REMARK 500 O HOH B 586 O HOH B 587 2.00 REMARK 500 O HOH B 390 O HOH B 582 2.00 REMARK 500 OH TYR A 256 O HOH A 383 2.14 REMARK 500 O HOH A 355 O HOH A 551 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 73 23.89 -145.28 REMARK 500 LEU A 144 -156.43 -106.40 REMARK 500 ASN A 171 39.11 -91.86 REMARK 500 HIS A 211 -163.45 -113.96 REMARK 500 PRO A 213 44.53 -78.66 REMARK 500 MET B 73 23.88 -143.58 REMARK 500 LEU B 144 -154.06 -106.88 REMARK 500 ASN B 171 42.60 -94.65 REMARK 500 HIS B 211 -164.69 -111.30 REMARK 500 PRO B 213 48.44 -83.42 REMARK 500 ARG B 257 159.26 -48.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 262 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 142 OE2 REMARK 620 2 ASP A 177 OD2 96.7 REMARK 620 3 GLN A 203 OE1 84.0 90.8 REMARK 620 4 GLU A 239 OE1 170.4 88.2 87.7 REMARK 620 5 HOH A 298 O 96.9 99.0 170.0 90.5 REMARK 620 6 HOH A 332 O 85.0 176.2 86.1 89.6 84.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 262 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 142 OE2 REMARK 620 2 ASP B 177 OD2 95.7 REMARK 620 3 GLN B 203 OE1 87.6 92.9 REMARK 620 4 GLU B 239 OE1 178.3 84.2 90.7 REMARK 620 5 HOH B 586 O 91.9 97.8 169.2 89.8 REMARK 620 6 HOH B 592 O 88.1 176.2 87.2 92.0 82.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 262 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 263 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 264 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 265 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 262 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 263 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 264 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 265 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: BRABA.00070.A RELATED DB: TARGETDB DBREF 3NGF A 1 261 UNP Q2YLA2 Q2YLA2_BRUA2 1 261 DBREF 3NGF B 1 261 UNP Q2YLA2 Q2YLA2_BRUA2 1 261 SEQADV 3NGF MET A -7 UNP Q2YLA2 EXPRESSION TAG SEQADV 3NGF ALA A -6 UNP Q2YLA2 EXPRESSION TAG SEQADV 3NGF HIS A -5 UNP Q2YLA2 EXPRESSION TAG SEQADV 3NGF HIS A -4 UNP Q2YLA2 EXPRESSION TAG SEQADV 3NGF HIS A -3 UNP Q2YLA2 EXPRESSION TAG SEQADV 3NGF HIS A -2 UNP Q2YLA2 EXPRESSION TAG SEQADV 3NGF HIS A -1 UNP Q2YLA2 EXPRESSION TAG SEQADV 3NGF HIS A 0 UNP Q2YLA2 EXPRESSION TAG SEQADV 3NGF MET B -7 UNP Q2YLA2 EXPRESSION TAG SEQADV 3NGF ALA B -6 UNP Q2YLA2 EXPRESSION TAG SEQADV 3NGF HIS B -5 UNP Q2YLA2 EXPRESSION TAG SEQADV 3NGF HIS B -4 UNP Q2YLA2 EXPRESSION TAG SEQADV 3NGF HIS B -3 UNP Q2YLA2 EXPRESSION TAG SEQADV 3NGF HIS B -2 UNP Q2YLA2 EXPRESSION TAG SEQADV 3NGF HIS B -1 UNP Q2YLA2 EXPRESSION TAG SEQADV 3NGF HIS B 0 UNP Q2YLA2 EXPRESSION TAG SEQRES 1 A 269 MET ALA HIS HIS HIS HIS HIS HIS MET PRO ARG PHE ALA SEQRES 2 A 269 ALA ASN LEU SER THR MET PHE ASN GLU VAL PRO PHE LEU SEQRES 3 A 269 GLU ARG PHE ARG LEU ALA ALA GLU ALA GLY PHE GLY GLY SEQRES 4 A 269 VAL GLU PHE LEU PHE PRO TYR ASP PHE ASP ALA ASP VAL SEQRES 5 A 269 ILE ALA ARG GLU LEU LYS GLN HIS ASN LEU THR GLN VAL SEQRES 6 A 269 LEU PHE ASN MET PRO PRO GLY ASP TRP ALA ALA GLY GLU SEQRES 7 A 269 ARG GLY MET ALA ALA ILE SER GLY ARG GLU GLN GLU PHE SEQRES 8 A 269 ARG ASP ASN VAL ASP ILE ALA LEU HIS TYR ALA LEU ALA SEQRES 9 A 269 LEU ASP CYS ARG THR LEU HIS ALA MET SER GLY ILE THR SEQRES 10 A 269 GLU GLY LEU ASP ARG LYS ALA CYS GLU GLU THR PHE ILE SEQRES 11 A 269 GLU ASN PHE ARG TYR ALA ALA ASP LYS LEU ALA PRO HIS SEQRES 12 A 269 GLY ILE THR VAL LEU VAL GLU PRO LEU ASN THR ARG ASN SEQRES 13 A 269 MET PRO GLY TYR PHE ILE VAL HIS GLN LEU GLU ALA VAL SEQRES 14 A 269 GLY LEU VAL LYS ARG VAL ASN ARG PRO ASN VAL ALA VAL SEQRES 15 A 269 GLN LEU ASP LEU TYR HIS ALA GLN ILE MET ASP GLY ASP SEQRES 16 A 269 LEU THR ARG LEU ILE GLU LYS MET ASN GLY ALA PHE SER SEQRES 17 A 269 HIS VAL GLN ILE ALA SER VAL PRO ASP ARG HIS GLU PRO SEQRES 18 A 269 ASP GLU GLY GLU LEU ASN TYR PRO TYR LEU PHE SER VAL SEQRES 19 A 269 LEU GLU SER VAL GLY TYR ARG GLY TRP VAL GLY CYS GLU SEQRES 20 A 269 TYR ASN PRO ARG GLY LYS THR GLU SER GLY LEU ALA TRP SEQRES 21 A 269 PHE ALA PRO TYR ARG ASP GLN SER ALA SEQRES 1 B 269 MET ALA HIS HIS HIS HIS HIS HIS MET PRO ARG PHE ALA SEQRES 2 B 269 ALA ASN LEU SER THR MET PHE ASN GLU VAL PRO PHE LEU SEQRES 3 B 269 GLU ARG PHE ARG LEU ALA ALA GLU ALA GLY PHE GLY GLY SEQRES 4 B 269 VAL GLU PHE LEU PHE PRO TYR ASP PHE ASP ALA ASP VAL SEQRES 5 B 269 ILE ALA ARG GLU LEU LYS GLN HIS ASN LEU THR GLN VAL SEQRES 6 B 269 LEU PHE ASN MET PRO PRO GLY ASP TRP ALA ALA GLY GLU SEQRES 7 B 269 ARG GLY MET ALA ALA ILE SER GLY ARG GLU GLN GLU PHE SEQRES 8 B 269 ARG ASP ASN VAL ASP ILE ALA LEU HIS TYR ALA LEU ALA SEQRES 9 B 269 LEU ASP CYS ARG THR LEU HIS ALA MET SER GLY ILE THR SEQRES 10 B 269 GLU GLY LEU ASP ARG LYS ALA CYS GLU GLU THR PHE ILE SEQRES 11 B 269 GLU ASN PHE ARG TYR ALA ALA ASP LYS LEU ALA PRO HIS SEQRES 12 B 269 GLY ILE THR VAL LEU VAL GLU PRO LEU ASN THR ARG ASN SEQRES 13 B 269 MET PRO GLY TYR PHE ILE VAL HIS GLN LEU GLU ALA VAL SEQRES 14 B 269 GLY LEU VAL LYS ARG VAL ASN ARG PRO ASN VAL ALA VAL SEQRES 15 B 269 GLN LEU ASP LEU TYR HIS ALA GLN ILE MET ASP GLY ASP SEQRES 16 B 269 LEU THR ARG LEU ILE GLU LYS MET ASN GLY ALA PHE SER SEQRES 17 B 269 HIS VAL GLN ILE ALA SER VAL PRO ASP ARG HIS GLU PRO SEQRES 18 B 269 ASP GLU GLY GLU LEU ASN TYR PRO TYR LEU PHE SER VAL SEQRES 19 B 269 LEU GLU SER VAL GLY TYR ARG GLY TRP VAL GLY CYS GLU SEQRES 20 B 269 TYR ASN PRO ARG GLY LYS THR GLU SER GLY LEU ALA TRP SEQRES 21 B 269 PHE ALA PRO TYR ARG ASP GLN SER ALA HET MN A 262 1 HET GOL A 263 6 HET GOL A 264 6 HET GOL A 265 6 HET MN B 262 1 HET GOL B 263 6 HET GOL B 264 6 HET GOL B 265 6 HETNAM MN MANGANESE (II) ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 MN 2(MN 2+) FORMUL 4 GOL 6(C3 H8 O3) FORMUL 11 HOH *595(H2 O) HELIX 1 1 PRO A 16 ALA A 27 1 12 HELIX 2 2 ASP A 41 HIS A 52 1 12 HELIX 3 3 ARG A 79 LEU A 97 1 19 HELIX 4 4 ASP A 113 ALA A 133 1 21 HELIX 5 5 PRO A 134 GLY A 136 5 3 HELIX 6 6 HIS A 156 ASN A 168 1 13 HELIX 7 7 LEU A 178 ASP A 185 1 8 HELIX 8 8 ASP A 187 MET A 195 1 9 HELIX 9 9 ASN A 219 VAL A 230 1 12 HELIX 10 10 LYS A 245 ARG A 257 5 13 HELIX 11 11 PRO B 16 LEU B 18 5 3 HELIX 12 12 GLU B 19 ALA B 27 1 9 HELIX 13 13 ASP B 41 HIS B 52 1 12 HELIX 14 14 ARG B 79 ASP B 98 1 20 HELIX 15 15 ASP B 113 ALA B 133 1 21 HELIX 16 16 PRO B 134 GLY B 136 5 3 HELIX 17 17 HIS B 156 ASN B 168 1 13 HELIX 18 18 LEU B 178 ASP B 185 1 8 HELIX 19 19 ASP B 187 MET B 195 1 9 HELIX 20 20 ASN B 219 VAL B 230 1 12 HELIX 21 21 THR B 246 ARG B 257 5 12 SHEET 1 A 9 ARG A 3 ASN A 7 0 SHEET 2 A 9 GLY A 31 GLU A 33 1 O GLU A 33 N ALA A 6 SHEET 3 A 9 THR A 55 ASN A 60 1 O VAL A 57 N VAL A 32 SHEET 4 A 9 THR A 101 HIS A 103 1 O HIS A 103 N PHE A 59 SHEET 5 A 9 THR A 138 VAL A 141 1 O LEU A 140 N LEU A 102 SHEET 6 A 9 VAL A 172 ASP A 177 1 O GLN A 175 N VAL A 141 SHEET 7 A 9 PHE A 199 ILE A 204 1 O HIS A 201 N LEU A 176 SHEET 8 A 9 TRP A 235 CYS A 238 1 O GLY A 237 N VAL A 202 SHEET 9 A 9 ARG A 3 ASN A 7 1 N ALA A 5 O CYS A 238 SHEET 1 B 9 ARG B 3 ASN B 7 0 SHEET 2 B 9 GLY B 31 GLU B 33 1 O GLU B 33 N ALA B 6 SHEET 3 B 9 THR B 55 ASN B 60 1 O VAL B 57 N VAL B 32 SHEET 4 B 9 THR B 101 HIS B 103 1 O HIS B 103 N PHE B 59 SHEET 5 B 9 THR B 138 VAL B 141 1 O LEU B 140 N LEU B 102 SHEET 6 B 9 VAL B 172 ASP B 177 1 O GLN B 175 N VAL B 141 SHEET 7 B 9 PHE B 199 ILE B 204 1 O HIS B 201 N LEU B 176 SHEET 8 B 9 TRP B 235 CYS B 238 1 O GLY B 237 N VAL B 202 SHEET 9 B 9 ARG B 3 ASN B 7 1 N ALA B 5 O CYS B 238 LINK OE2 GLU A 142 MN MN A 262 1555 1555 2.16 LINK OD2 ASP A 177 MN MN A 262 1555 1555 2.22 LINK OE1 GLN A 203 MN MN A 262 1555 1555 2.29 LINK OE1 GLU A 239 MN MN A 262 1555 1555 2.08 LINK MN MN A 262 O HOH A 298 1555 1555 2.27 LINK MN MN A 262 O HOH A 332 1555 1555 2.47 LINK OE2 GLU B 142 MN MN B 262 1555 1555 2.13 LINK OD2 ASP B 177 MN MN B 262 1555 1555 2.23 LINK OE1 GLN B 203 MN MN B 262 1555 1555 2.30 LINK OE1 GLU B 239 MN MN B 262 1555 1555 2.09 LINK MN MN B 262 O HOH B 586 1555 1555 2.29 LINK MN MN B 262 O HOH B 592 1555 1555 2.52 CISPEP 1 VAL A 207 PRO A 208 0 6.95 CISPEP 2 VAL B 207 PRO B 208 0 7.82 SITE 1 AC1 6 GLU A 142 ASP A 177 GLN A 203 GLU A 239 SITE 2 AC1 6 HOH A 298 HOH A 332 SITE 1 AC2 6 SER A 9 PHE A 17 LEU A 35 PHE A 36 SITE 2 AC2 6 HOH A 385 HOH A 555 SITE 1 AC3 5 GLU A 48 GLN A 51 HIS A 52 HOH A 297 SITE 2 AC3 5 HOH A 356 SITE 1 AC4 6 THR A 146 ARG A 147 ILE A 183 HOH A 286 SITE 2 AC4 6 HOH A 401 ASP B 187 SITE 1 AC5 6 GLU B 142 ASP B 177 GLN B 203 GLU B 239 SITE 2 AC5 6 HOH B 586 HOH B 592 SITE 1 AC6 7 SER B 9 LEU B 35 PHE B 36 HOH B 284 SITE 2 AC6 7 HOH B 346 HOH B 518 HOH B 541 SITE 1 AC7 7 THR B 109 GLU B 110 ARG B 114 TYR B 152 SITE 2 AC7 7 PHE B 153 HOH B 413 HOH B 469 SITE 1 AC8 6 ASP A 187 THR B 146 ARG B 147 ILE B 183 SITE 2 AC8 6 HOH B 297 HOH B 415 CRYST1 52.980 120.640 54.680 90.00 117.14 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018875 0.000000 0.009675 0.00000 SCALE2 0.000000 0.008289 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020551 0.00000