data_3NKC # _entry.id 3NKC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3NKC pdb_00003nkc 10.2210/pdb3nkc/pdb RCSB RCSB059937 ? ? WWPDB D_1000059937 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1RC2 'wild-type AqpZ' unspecified PDB 3NK5 'AqpZ F43W' unspecified PDB 3NKA 'AqpZ H174G,T183F' unspecified # _pdbx_database_status.entry_id 3NKC _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-06-18 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Savage, D.F.' 1 ;O'Connell III, J.D. ; 2 'Finer-Moore, J.' 3 'Stroud, R.M.' 4 # _citation.id primary _citation.title 'Structural context shapes the aquaporin selectivity filter.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 107 _citation.page_first 17164 _citation.page_last 17169 _citation.year 2010 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20855585 _citation.pdbx_database_id_DOI 10.1073/pnas.1009864107 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Savage, D.F.' 1 ? primary ;O'Connell, J.D. ; 2 ? primary 'Miercke, L.J.' 3 ? primary 'Finer-Moore, J.' 4 ? primary 'Stroud, R.M.' 5 ? # _cell.length_a 92.892 _cell.length_b 92.892 _cell.length_c 79.476 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3NKC _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 4' _symmetry.entry_id 3NKC _symmetry.Int_Tables_number 75 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Aquaporin Z' 24017.977 2 ? F43W,H173G,T183F ? ? 2 non-polymer man 'octyl beta-D-glucopyranoside' 292.369 3 ? ? ? ? 3 water nat water 18.015 12 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Bacterial nodulin-like intrinsic protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ASHMFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAWGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFP AKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFA PAGFAPIAIGLALTLIGLISIPVTNFSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKRD ; _entity_poly.pdbx_seq_one_letter_code_can ;ASHMFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAWGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFP AKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFA PAGFAPIAIGLALTLIGLISIPVTNFSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKRD ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 PHE n 1 6 ARG n 1 7 LYS n 1 8 LEU n 1 9 ALA n 1 10 ALA n 1 11 GLU n 1 12 CYS n 1 13 PHE n 1 14 GLY n 1 15 THR n 1 16 PHE n 1 17 TRP n 1 18 LEU n 1 19 VAL n 1 20 PHE n 1 21 GLY n 1 22 GLY n 1 23 CYS n 1 24 GLY n 1 25 SER n 1 26 ALA n 1 27 VAL n 1 28 LEU n 1 29 ALA n 1 30 ALA n 1 31 GLY n 1 32 PHE n 1 33 PRO n 1 34 GLU n 1 35 LEU n 1 36 GLY n 1 37 ILE n 1 38 GLY n 1 39 PHE n 1 40 ALA n 1 41 GLY n 1 42 VAL n 1 43 ALA n 1 44 LEU n 1 45 ALA n 1 46 TRP n 1 47 GLY n 1 48 LEU n 1 49 THR n 1 50 VAL n 1 51 LEU n 1 52 THR n 1 53 MET n 1 54 ALA n 1 55 PHE n 1 56 ALA n 1 57 VAL n 1 58 GLY n 1 59 HIS n 1 60 ILE n 1 61 SER n 1 62 GLY n 1 63 GLY n 1 64 HIS n 1 65 PHE n 1 66 ASN n 1 67 PRO n 1 68 ALA n 1 69 VAL n 1 70 THR n 1 71 ILE n 1 72 GLY n 1 73 LEU n 1 74 TRP n 1 75 ALA n 1 76 GLY n 1 77 GLY n 1 78 ARG n 1 79 PHE n 1 80 PRO n 1 81 ALA n 1 82 LYS n 1 83 GLU n 1 84 VAL n 1 85 VAL n 1 86 GLY n 1 87 TYR n 1 88 VAL n 1 89 ILE n 1 90 ALA n 1 91 GLN n 1 92 VAL n 1 93 VAL n 1 94 GLY n 1 95 GLY n 1 96 ILE n 1 97 VAL n 1 98 ALA n 1 99 ALA n 1 100 ALA n 1 101 LEU n 1 102 LEU n 1 103 TYR n 1 104 LEU n 1 105 ILE n 1 106 ALA n 1 107 SER n 1 108 GLY n 1 109 LYS n 1 110 THR n 1 111 GLY n 1 112 PHE n 1 113 ASP n 1 114 ALA n 1 115 ALA n 1 116 ALA n 1 117 SER n 1 118 GLY n 1 119 PHE n 1 120 ALA n 1 121 SER n 1 122 ASN n 1 123 GLY n 1 124 TYR n 1 125 GLY n 1 126 GLU n 1 127 HIS n 1 128 SER n 1 129 PRO n 1 130 GLY n 1 131 GLY n 1 132 TYR n 1 133 SER n 1 134 MET n 1 135 LEU n 1 136 SER n 1 137 ALA n 1 138 LEU n 1 139 VAL n 1 140 VAL n 1 141 GLU n 1 142 LEU n 1 143 VAL n 1 144 LEU n 1 145 SER n 1 146 ALA n 1 147 GLY n 1 148 PHE n 1 149 LEU n 1 150 LEU n 1 151 VAL n 1 152 ILE n 1 153 HIS n 1 154 GLY n 1 155 ALA n 1 156 THR n 1 157 ASP n 1 158 LYS n 1 159 PHE n 1 160 ALA n 1 161 PRO n 1 162 ALA n 1 163 GLY n 1 164 PHE n 1 165 ALA n 1 166 PRO n 1 167 ILE n 1 168 ALA n 1 169 ILE n 1 170 GLY n 1 171 LEU n 1 172 ALA n 1 173 LEU n 1 174 THR n 1 175 LEU n 1 176 ILE n 1 177 GLY n 1 178 LEU n 1 179 ILE n 1 180 SER n 1 181 ILE n 1 182 PRO n 1 183 VAL n 1 184 THR n 1 185 ASN n 1 186 PHE n 1 187 SER n 1 188 VAL n 1 189 ASN n 1 190 PRO n 1 191 ALA n 1 192 ARG n 1 193 SER n 1 194 THR n 1 195 ALA n 1 196 VAL n 1 197 ALA n 1 198 ILE n 1 199 PHE n 1 200 GLN n 1 201 GLY n 1 202 GLY n 1 203 TRP n 1 204 ALA n 1 205 LEU n 1 206 GLU n 1 207 GLN n 1 208 LEU n 1 209 TRP n 1 210 PHE n 1 211 PHE n 1 212 TRP n 1 213 VAL n 1 214 VAL n 1 215 PRO n 1 216 ILE n 1 217 VAL n 1 218 GLY n 1 219 GLY n 1 220 ILE n 1 221 ILE n 1 222 GLY n 1 223 GLY n 1 224 LEU n 1 225 ILE n 1 226 TYR n 1 227 ARG n 1 228 THR n 1 229 LEU n 1 230 LEU n 1 231 GLU n 1 232 LYS n 1 233 ARG n 1 234 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'aqpZ, b0875, bniP, JW0859' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain K12 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'C43(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code AQPZ_ECOLI _struct_ref.pdbx_db_accession P60844 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKE VVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAG FAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKRD ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3NKC A 4 ? 234 ? P60844 1 ? 231 ? 1 231 2 1 3NKC B 4 ? 234 ? P60844 1 ? 231 ? 1 231 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3NKC ALA A 1 ? UNP P60844 ? ? 'expression tag' -2 1 1 3NKC SER A 2 ? UNP P60844 ? ? 'expression tag' -1 2 1 3NKC HIS A 3 ? UNP P60844 ? ? 'expression tag' 0 3 1 3NKC TRP A 46 ? UNP P60844 PHE 43 'engineered mutation' 43 4 1 3NKC GLY A 177 ? UNP P60844 HIS 174 'engineered mutation' 174 5 1 3NKC PHE A 186 ? UNP P60844 THR 183 'engineered mutation' 183 6 2 3NKC ALA B 1 ? UNP P60844 ? ? 'expression tag' -2 7 2 3NKC SER B 2 ? UNP P60844 ? ? 'expression tag' -1 8 2 3NKC HIS B 3 ? UNP P60844 ? ? 'expression tag' 0 9 2 3NKC TRP B 46 ? UNP P60844 PHE 43 'engineered mutation' 43 10 2 3NKC GLY B 177 ? UNP P60844 HIS 174 'engineered mutation' 174 11 2 3NKC PHE B 186 ? UNP P60844 THR 183 'engineered mutation' 183 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BOG D-saccharide n 'octyl beta-D-glucopyranoside' 'Beta-Octylglucoside; octyl beta-D-glucoside; octyl D-glucoside; octyl glucoside' 'C14 H28 O6' 292.369 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3NKC _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.57 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 65.54 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;25-30% PEG 2000 100 mM sodium cacodylate 50-100 mM MgCl2, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 103. _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2006-10-15 _diffrn_detector.details monochrometer # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Khozu double flat crystal' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97949 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.3.1' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97949 _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.3.1 # _reflns.entry_id 3NKC _reflns.d_resolution_high 3.100 _reflns.d_resolution_low 92.892 _reflns.number_all 10963 _reflns.number_obs 10963 _reflns.pdbx_Rmerge_I_obs 0.115 _reflns.pdbx_netI_over_sigmaI 10.600 _reflns.pdbx_Rsym_value 0.115 _reflns.pdbx_redundancy 3.000 _reflns.percent_possible_obs 88.000 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I 3. _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 3.100 3.270 ? 4840 ? 0.679 1.1 0.679 ? 3.000 ? 1621 90.400 ? 1 3.270 3.470 ? 4546 ? 0.468 1.3 0.468 ? 3.000 ? 1538 89.200 ? 2 3.470 3.710 ? 4286 ? 0.309 2.2 0.309 ? 3.000 ? 1450 90.200 ? 3 3.710 4.000 ? 3853 ? 0.182 2.5 0.182 ? 2.900 ? 1313 88.200 ? 4 4.000 4.380 ? 3674 ? 0.113 6.4 0.113 ? 3.000 ? 1228 88.400 ? 5 4.380 4.900 ? 3245 ? 0.096 7.5 0.096 ? 3.000 ? 1098 87.900 ? 6 4.900 5.660 ? 2726 ? 0.088 8.0 0.088 ? 2.900 ? 955 86.700 ? 7 5.660 6.930 ? 2389 ? 0.061 12.0 0.061 ? 2.900 ? 810 86.000 ? 8 6.930 9.800 ? 1921 ? 0.032 17.7 0.032 ? 3.000 ? 638 85.800 ? 9 9.800 21.678 ? 934 ? 0.028 14.8 0.028 ? 3.000 ? 312 75.100 ? 10 # _refine.entry_id 3NKC _refine.ls_d_res_high 3.1000 _refine.ls_d_res_low 19.6700 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 88.4800 _refine.ls_number_reflns_obs 10948 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : RESIDUAL ONLY' _refine.ls_R_factor_obs 0.1992 _refine.ls_R_factor_R_work 0.1981 _refine.ls_wR_factor_R_work 0.1717 _refine.ls_R_factor_R_free 0.2219 _refine.ls_wR_factor_R_free 0.1860 _refine.ls_percent_reflns_R_free 4.7000 _refine.ls_number_reflns_R_free 519 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 67.397 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model 'restrained individual with TLS' _refine.aniso_B[1][1] 0.0800 _refine.aniso_B[2][2] 0.0800 _refine.aniso_B[3][3] -0.1600 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9380 _refine.correlation_coeff_Fo_to_Fc_free 0.9370 _refine.overall_SU_R_Cruickshank_DPI 0.3801 _refine.overall_SU_R_free 0.4185 _refine.pdbx_overall_ESU_R_Free 0.4180 _refine.overall_SU_ML 0.2990 _refine.overall_SU_B 39.1450 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB entry 2O9F' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8705 _refine.B_iso_max 112.490 _refine.B_iso_min 2.000 _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.ls_R_factor_all ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3372 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 60 _refine_hist.number_atoms_solvent 12 _refine_hist.number_atoms_total 3444 _refine_hist.d_res_high 3.1000 _refine_hist.d_res_low 19.6700 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 3528 0.016 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 2288 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 4804 1.542 1.957 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 5580 1.093 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 462 6.325 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 109 32.612 22.110 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 471 17.481 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 9 17.235 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 557 0.079 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 3937 0.007 0.021 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 780 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2264 0.414 1.500 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 980 0.079 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 3573 0.773 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 1264 1.014 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 1231 1.704 4.500 ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 'X-RAY DIFFRACTION' 1 1 'TIGHT POSITIONAL' A 2739 0.040 0.050 1 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 1 1 'TIGHT THERMAL' A 2739 0.070 0.500 2 ? ? ? ? ? ? # _refine_ls_shell.d_res_high 3.1000 _refine_ls_shell.d_res_low 3.1790 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 88.4500 _refine_ls_shell.number_reflns_R_work 756 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2720 _refine_ls_shell.R_factor_R_free 0.3340 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 33 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 789 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 A 1 2 B # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 1 A MET 4 . A GLU 231 . A MET 1 A GLU 228 1 ? 1 2 1 B MET 4 . B GLU 231 . B MET 1 B GLU 228 1 ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 3NKC _struct.title 'Crystal structure of AqpZ F43W,H174G,T183F' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3NKC _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.text 'aquaporin, transport protein, integral membrane protein, selectivity filter mutants' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 3 ? # _struct_biol.id 1 _struct_biol.details 'The biological assembly is a tetramer, which can be generated from either chain using the crystallographic 4-fold axis' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 HIS A 3 ? ALA A 29 ? HIS A 0 ALA A 26 1 ? 27 HELX_P HELX_P2 2 ILE A 37 ? GLY A 62 ? ILE A 34 GLY A 59 1 ? 26 HELX_P HELX_P3 3 ASN A 66 ? GLY A 76 ? ASN A 63 GLY A 73 1 ? 11 HELX_P HELX_P4 4 GLU A 83 ? GLY A 108 ? GLU A 80 GLY A 105 1 ? 26 HELX_P HELX_P5 5 ASP A 113 ? GLY A 118 ? ASP A 110 GLY A 115 1 ? 6 HELX_P HELX_P6 6 TYR A 124 ? SER A 128 ? TYR A 121 SER A 125 5 ? 5 HELX_P HELX_P7 7 SER A 133 ? THR A 156 ? SER A 130 THR A 153 1 ? 24 HELX_P HELX_P8 8 PHE A 164 ? ASN A 185 ? PHE A 161 ASN A 182 1 ? 22 HELX_P HELX_P9 9 ASN A 189 ? GLY A 201 ? ASN A 186 GLY A 198 1 ? 13 HELX_P HELX_P10 10 GLY A 202 ? LEU A 208 ? GLY A 199 LEU A 205 1 ? 7 HELX_P HELX_P11 11 TRP A 209 ? LEU A 229 ? TRP A 206 LEU A 226 1 ? 21 HELX_P HELX_P12 12 HIS B 3 ? ALA B 29 ? HIS B 0 ALA B 26 1 ? 27 HELX_P HELX_P13 13 ILE B 37 ? GLY B 62 ? ILE B 34 GLY B 59 1 ? 26 HELX_P HELX_P14 14 ASN B 66 ? GLY B 76 ? ASN B 63 GLY B 73 1 ? 11 HELX_P HELX_P15 15 GLU B 83 ? SER B 107 ? GLU B 80 SER B 104 1 ? 25 HELX_P HELX_P16 16 ASP B 113 ? GLY B 118 ? ASP B 110 GLY B 115 1 ? 6 HELX_P HELX_P17 17 TYR B 124 ? SER B 128 ? TYR B 121 SER B 125 5 ? 5 HELX_P HELX_P18 18 SER B 133 ? THR B 156 ? SER B 130 THR B 153 1 ? 24 HELX_P HELX_P19 19 PHE B 164 ? ASN B 185 ? PHE B 161 ASN B 182 1 ? 22 HELX_P HELX_P20 20 ASN B 189 ? GLY B 201 ? ASN B 186 GLY B 198 1 ? 13 HELX_P HELX_P21 21 GLY B 202 ? LEU B 208 ? GLY B 199 LEU B 205 1 ? 7 HELX_P HELX_P22 22 TRP B 209 ? LEU B 229 ? TRP B 206 LEU B 226 1 ? 21 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LYS _struct_mon_prot_cis.label_seq_id 232 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LYS _struct_mon_prot_cis.auth_seq_id 229 _struct_mon_prot_cis.auth_asym_id B _struct_mon_prot_cis.pdbx_label_comp_id_2 ARG _struct_mon_prot_cis.pdbx_label_seq_id_2 233 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 ARG _struct_mon_prot_cis.pdbx_auth_seq_id_2 230 _struct_mon_prot_cis.pdbx_auth_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -1.69 # _atom_sites.entry_id 3NKC _atom_sites.fract_transf_matrix[1][1] 0.010765 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010765 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012582 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 -2 ? ? ? A . n A 1 2 SER 2 -1 -1 SER SER A . n A 1 3 HIS 3 0 0 HIS HIS A . n A 1 4 MET 4 1 1 MET MET A . n A 1 5 PHE 5 2 2 PHE PHE A . n A 1 6 ARG 6 3 3 ARG ARG A . n A 1 7 LYS 7 4 4 LYS LYS A . n A 1 8 LEU 8 5 5 LEU LEU A . n A 1 9 ALA 9 6 6 ALA ALA A . n A 1 10 ALA 10 7 7 ALA ALA A . n A 1 11 GLU 11 8 8 GLU GLU A . n A 1 12 CYS 12 9 9 CYS CYS A . n A 1 13 PHE 13 10 10 PHE PHE A . n A 1 14 GLY 14 11 11 GLY GLY A . n A 1 15 THR 15 12 12 THR THR A . n A 1 16 PHE 16 13 13 PHE PHE A . n A 1 17 TRP 17 14 14 TRP TRP A . n A 1 18 LEU 18 15 15 LEU LEU A . n A 1 19 VAL 19 16 16 VAL VAL A . n A 1 20 PHE 20 17 17 PHE PHE A . n A 1 21 GLY 21 18 18 GLY GLY A . n A 1 22 GLY 22 19 19 GLY GLY A . n A 1 23 CYS 23 20 20 CYS CYS A . n A 1 24 GLY 24 21 21 GLY GLY A . n A 1 25 SER 25 22 22 SER SER A . n A 1 26 ALA 26 23 23 ALA ALA A . n A 1 27 VAL 27 24 24 VAL VAL A . n A 1 28 LEU 28 25 25 LEU LEU A . n A 1 29 ALA 29 26 26 ALA ALA A . n A 1 30 ALA 30 27 27 ALA ALA A . n A 1 31 GLY 31 28 28 GLY GLY A . n A 1 32 PHE 32 29 29 PHE PHE A . n A 1 33 PRO 33 30 30 PRO PRO A . n A 1 34 GLU 34 31 31 GLU GLU A . n A 1 35 LEU 35 32 32 LEU LEU A . n A 1 36 GLY 36 33 33 GLY GLY A . n A 1 37 ILE 37 34 34 ILE ILE A . n A 1 38 GLY 38 35 35 GLY GLY A . n A 1 39 PHE 39 36 36 PHE PHE A . n A 1 40 ALA 40 37 37 ALA ALA A . n A 1 41 GLY 41 38 38 GLY GLY A . n A 1 42 VAL 42 39 39 VAL VAL A . n A 1 43 ALA 43 40 40 ALA ALA A . n A 1 44 LEU 44 41 41 LEU LEU A . n A 1 45 ALA 45 42 42 ALA ALA A . n A 1 46 TRP 46 43 43 TRP TRP A . n A 1 47 GLY 47 44 44 GLY GLY A . n A 1 48 LEU 48 45 45 LEU LEU A . n A 1 49 THR 49 46 46 THR THR A . n A 1 50 VAL 50 47 47 VAL VAL A . n A 1 51 LEU 51 48 48 LEU LEU A . n A 1 52 THR 52 49 49 THR THR A . n A 1 53 MET 53 50 50 MET MET A . n A 1 54 ALA 54 51 51 ALA ALA A . n A 1 55 PHE 55 52 52 PHE PHE A . n A 1 56 ALA 56 53 53 ALA ALA A . n A 1 57 VAL 57 54 54 VAL VAL A . n A 1 58 GLY 58 55 55 GLY GLY A . n A 1 59 HIS 59 56 56 HIS HIS A . n A 1 60 ILE 60 57 57 ILE ILE A . n A 1 61 SER 61 58 58 SER SER A . n A 1 62 GLY 62 59 59 GLY GLY A . n A 1 63 GLY 63 60 60 GLY GLY A . n A 1 64 HIS 64 61 61 HIS HIS A . n A 1 65 PHE 65 62 62 PHE PHE A . n A 1 66 ASN 66 63 63 ASN ASN A . n A 1 67 PRO 67 64 64 PRO PRO A . n A 1 68 ALA 68 65 65 ALA ALA A . n A 1 69 VAL 69 66 66 VAL VAL A . n A 1 70 THR 70 67 67 THR THR A . n A 1 71 ILE 71 68 68 ILE ILE A . n A 1 72 GLY 72 69 69 GLY GLY A . n A 1 73 LEU 73 70 70 LEU LEU A . n A 1 74 TRP 74 71 71 TRP TRP A . n A 1 75 ALA 75 72 72 ALA ALA A . n A 1 76 GLY 76 73 73 GLY GLY A . n A 1 77 GLY 77 74 74 GLY GLY A . n A 1 78 ARG 78 75 75 ARG ARG A . n A 1 79 PHE 79 76 76 PHE PHE A . n A 1 80 PRO 80 77 77 PRO PRO A . n A 1 81 ALA 81 78 78 ALA ALA A . n A 1 82 LYS 82 79 79 LYS LYS A . n A 1 83 GLU 83 80 80 GLU GLU A . n A 1 84 VAL 84 81 81 VAL VAL A . n A 1 85 VAL 85 82 82 VAL VAL A . n A 1 86 GLY 86 83 83 GLY GLY A . n A 1 87 TYR 87 84 84 TYR TYR A . n A 1 88 VAL 88 85 85 VAL VAL A . n A 1 89 ILE 89 86 86 ILE ILE A . n A 1 90 ALA 90 87 87 ALA ALA A . n A 1 91 GLN 91 88 88 GLN GLN A . n A 1 92 VAL 92 89 89 VAL VAL A . n A 1 93 VAL 93 90 90 VAL VAL A . n A 1 94 GLY 94 91 91 GLY GLY A . n A 1 95 GLY 95 92 92 GLY GLY A . n A 1 96 ILE 96 93 93 ILE ILE A . n A 1 97 VAL 97 94 94 VAL VAL A . n A 1 98 ALA 98 95 95 ALA ALA A . n A 1 99 ALA 99 96 96 ALA ALA A . n A 1 100 ALA 100 97 97 ALA ALA A . n A 1 101 LEU 101 98 98 LEU LEU A . n A 1 102 LEU 102 99 99 LEU LEU A . n A 1 103 TYR 103 100 100 TYR TYR A . n A 1 104 LEU 104 101 101 LEU LEU A . n A 1 105 ILE 105 102 102 ILE ILE A . n A 1 106 ALA 106 103 103 ALA ALA A . n A 1 107 SER 107 104 104 SER SER A . n A 1 108 GLY 108 105 105 GLY GLY A . n A 1 109 LYS 109 106 106 LYS LYS A . n A 1 110 THR 110 107 107 THR THR A . n A 1 111 GLY 111 108 108 GLY GLY A . n A 1 112 PHE 112 109 109 PHE PHE A . n A 1 113 ASP 113 110 110 ASP ASP A . n A 1 114 ALA 114 111 111 ALA ALA A . n A 1 115 ALA 115 112 112 ALA ALA A . n A 1 116 ALA 116 113 113 ALA ALA A . n A 1 117 SER 117 114 114 SER SER A . n A 1 118 GLY 118 115 115 GLY GLY A . n A 1 119 PHE 119 116 116 PHE PHE A . n A 1 120 ALA 120 117 117 ALA ALA A . n A 1 121 SER 121 118 118 SER SER A . n A 1 122 ASN 122 119 119 ASN ASN A . n A 1 123 GLY 123 120 120 GLY GLY A . n A 1 124 TYR 124 121 121 TYR TYR A . n A 1 125 GLY 125 122 122 GLY GLY A . n A 1 126 GLU 126 123 123 GLU GLU A . n A 1 127 HIS 127 124 124 HIS HIS A . n A 1 128 SER 128 125 125 SER SER A . n A 1 129 PRO 129 126 126 PRO PRO A . n A 1 130 GLY 130 127 127 GLY GLY A . n A 1 131 GLY 131 128 128 GLY GLY A . n A 1 132 TYR 132 129 129 TYR TYR A . n A 1 133 SER 133 130 130 SER SER A . n A 1 134 MET 134 131 131 MET MET A . n A 1 135 LEU 135 132 132 LEU LEU A . n A 1 136 SER 136 133 133 SER SER A . n A 1 137 ALA 137 134 134 ALA ALA A . n A 1 138 LEU 138 135 135 LEU LEU A . n A 1 139 VAL 139 136 136 VAL VAL A . n A 1 140 VAL 140 137 137 VAL VAL A . n A 1 141 GLU 141 138 138 GLU GLU A . n A 1 142 LEU 142 139 139 LEU LEU A . n A 1 143 VAL 143 140 140 VAL VAL A . n A 1 144 LEU 144 141 141 LEU LEU A . n A 1 145 SER 145 142 142 SER SER A . n A 1 146 ALA 146 143 143 ALA ALA A . n A 1 147 GLY 147 144 144 GLY GLY A . n A 1 148 PHE 148 145 145 PHE PHE A . n A 1 149 LEU 149 146 146 LEU LEU A . n A 1 150 LEU 150 147 147 LEU LEU A . n A 1 151 VAL 151 148 148 VAL VAL A . n A 1 152 ILE 152 149 149 ILE ILE A . n A 1 153 HIS 153 150 150 HIS HIS A . n A 1 154 GLY 154 151 151 GLY GLY A . n A 1 155 ALA 155 152 152 ALA ALA A . n A 1 156 THR 156 153 153 THR THR A . n A 1 157 ASP 157 154 154 ASP ASP A . n A 1 158 LYS 158 155 155 LYS LYS A . n A 1 159 PHE 159 156 156 PHE PHE A . n A 1 160 ALA 160 157 157 ALA ALA A . n A 1 161 PRO 161 158 158 PRO PRO A . n A 1 162 ALA 162 159 159 ALA ALA A . n A 1 163 GLY 163 160 160 GLY GLY A . n A 1 164 PHE 164 161 161 PHE PHE A . n A 1 165 ALA 165 162 162 ALA ALA A . n A 1 166 PRO 166 163 163 PRO PRO A . n A 1 167 ILE 167 164 164 ILE ILE A . n A 1 168 ALA 168 165 165 ALA ALA A . n A 1 169 ILE 169 166 166 ILE ILE A . n A 1 170 GLY 170 167 167 GLY GLY A . n A 1 171 LEU 171 168 168 LEU LEU A . n A 1 172 ALA 172 169 169 ALA ALA A . n A 1 173 LEU 173 170 170 LEU LEU A . n A 1 174 THR 174 171 171 THR THR A . n A 1 175 LEU 175 172 172 LEU LEU A . n A 1 176 ILE 176 173 173 ILE ILE A . n A 1 177 GLY 177 174 174 GLY GLY A . n A 1 178 LEU 178 175 175 LEU LEU A . n A 1 179 ILE 179 176 176 ILE ILE A . n A 1 180 SER 180 177 177 SER SER A . n A 1 181 ILE 181 178 178 ILE ILE A . n A 1 182 PRO 182 179 179 PRO PRO A . n A 1 183 VAL 183 180 180 VAL VAL A . n A 1 184 THR 184 181 181 THR THR A . n A 1 185 ASN 185 182 182 ASN ASN A . n A 1 186 PHE 186 183 183 PHE PHE A . n A 1 187 SER 187 184 184 SER SER A . n A 1 188 VAL 188 185 185 VAL VAL A . n A 1 189 ASN 189 186 186 ASN ASN A . n A 1 190 PRO 190 187 187 PRO PRO A . n A 1 191 ALA 191 188 188 ALA ALA A . n A 1 192 ARG 192 189 189 ARG ARG A . n A 1 193 SER 193 190 190 SER SER A . n A 1 194 THR 194 191 191 THR THR A . n A 1 195 ALA 195 192 192 ALA ALA A . n A 1 196 VAL 196 193 193 VAL VAL A . n A 1 197 ALA 197 194 194 ALA ALA A . n A 1 198 ILE 198 195 195 ILE ILE A . n A 1 199 PHE 199 196 196 PHE PHE A . n A 1 200 GLN 200 197 197 GLN GLN A . n A 1 201 GLY 201 198 198 GLY GLY A . n A 1 202 GLY 202 199 199 GLY GLY A . n A 1 203 TRP 203 200 200 TRP TRP A . n A 1 204 ALA 204 201 201 ALA ALA A . n A 1 205 LEU 205 202 202 LEU LEU A . n A 1 206 GLU 206 203 203 GLU GLU A . n A 1 207 GLN 207 204 204 GLN GLN A . n A 1 208 LEU 208 205 205 LEU LEU A . n A 1 209 TRP 209 206 206 TRP TRP A . n A 1 210 PHE 210 207 207 PHE PHE A . n A 1 211 PHE 211 208 208 PHE PHE A . n A 1 212 TRP 212 209 209 TRP TRP A . n A 1 213 VAL 213 210 210 VAL VAL A . n A 1 214 VAL 214 211 211 VAL VAL A . n A 1 215 PRO 215 212 212 PRO PRO A . n A 1 216 ILE 216 213 213 ILE ILE A . n A 1 217 VAL 217 214 214 VAL VAL A . n A 1 218 GLY 218 215 215 GLY GLY A . n A 1 219 GLY 219 216 216 GLY GLY A . n A 1 220 ILE 220 217 217 ILE ILE A . n A 1 221 ILE 221 218 218 ILE ILE A . n A 1 222 GLY 222 219 219 GLY GLY A . n A 1 223 GLY 223 220 220 GLY GLY A . n A 1 224 LEU 224 221 221 LEU LEU A . n A 1 225 ILE 225 222 222 ILE ILE A . n A 1 226 TYR 226 223 223 TYR TYR A . n A 1 227 ARG 227 224 224 ARG ARG A . n A 1 228 THR 228 225 225 THR THR A . n A 1 229 LEU 229 226 226 LEU LEU A . n A 1 230 LEU 230 227 227 LEU LEU A . n A 1 231 GLU 231 228 228 GLU GLU A . n A 1 232 LYS 232 229 229 LYS LYS A . n A 1 233 ARG 233 230 ? ? ? A . n A 1 234 ASP 234 231 ? ? ? A . n B 1 1 ALA 1 -2 -2 ALA ALA B . n B 1 2 SER 2 -1 -1 SER SER B . n B 1 3 HIS 3 0 0 HIS HIS B . n B 1 4 MET 4 1 1 MET MET B . n B 1 5 PHE 5 2 2 PHE PHE B . n B 1 6 ARG 6 3 3 ARG ARG B . n B 1 7 LYS 7 4 4 LYS LYS B . n B 1 8 LEU 8 5 5 LEU LEU B . n B 1 9 ALA 9 6 6 ALA ALA B . n B 1 10 ALA 10 7 7 ALA ALA B . n B 1 11 GLU 11 8 8 GLU GLU B . n B 1 12 CYS 12 9 9 CYS CYS B . n B 1 13 PHE 13 10 10 PHE PHE B . n B 1 14 GLY 14 11 11 GLY GLY B . n B 1 15 THR 15 12 12 THR THR B . n B 1 16 PHE 16 13 13 PHE PHE B . n B 1 17 TRP 17 14 14 TRP TRP B . n B 1 18 LEU 18 15 15 LEU LEU B . n B 1 19 VAL 19 16 16 VAL VAL B . n B 1 20 PHE 20 17 17 PHE PHE B . n B 1 21 GLY 21 18 18 GLY GLY B . n B 1 22 GLY 22 19 19 GLY GLY B . n B 1 23 CYS 23 20 20 CYS CYS B . n B 1 24 GLY 24 21 21 GLY GLY B . n B 1 25 SER 25 22 22 SER SER B . n B 1 26 ALA 26 23 23 ALA ALA B . n B 1 27 VAL 27 24 24 VAL VAL B . n B 1 28 LEU 28 25 25 LEU LEU B . n B 1 29 ALA 29 26 26 ALA ALA B . n B 1 30 ALA 30 27 27 ALA ALA B . n B 1 31 GLY 31 28 28 GLY GLY B . n B 1 32 PHE 32 29 29 PHE PHE B . n B 1 33 PRO 33 30 30 PRO PRO B . n B 1 34 GLU 34 31 31 GLU GLU B . n B 1 35 LEU 35 32 32 LEU LEU B . n B 1 36 GLY 36 33 33 GLY GLY B . n B 1 37 ILE 37 34 34 ILE ILE B . n B 1 38 GLY 38 35 35 GLY GLY B . n B 1 39 PHE 39 36 36 PHE PHE B . n B 1 40 ALA 40 37 37 ALA ALA B . n B 1 41 GLY 41 38 38 GLY GLY B . n B 1 42 VAL 42 39 39 VAL VAL B . n B 1 43 ALA 43 40 40 ALA ALA B . n B 1 44 LEU 44 41 41 LEU LEU B . n B 1 45 ALA 45 42 42 ALA ALA B . n B 1 46 TRP 46 43 43 TRP TRP B . n B 1 47 GLY 47 44 44 GLY GLY B . n B 1 48 LEU 48 45 45 LEU LEU B . n B 1 49 THR 49 46 46 THR THR B . n B 1 50 VAL 50 47 47 VAL VAL B . n B 1 51 LEU 51 48 48 LEU LEU B . n B 1 52 THR 52 49 49 THR THR B . n B 1 53 MET 53 50 50 MET MET B . n B 1 54 ALA 54 51 51 ALA ALA B . n B 1 55 PHE 55 52 52 PHE PHE B . n B 1 56 ALA 56 53 53 ALA ALA B . n B 1 57 VAL 57 54 54 VAL VAL B . n B 1 58 GLY 58 55 55 GLY GLY B . n B 1 59 HIS 59 56 56 HIS HIS B . n B 1 60 ILE 60 57 57 ILE ILE B . n B 1 61 SER 61 58 58 SER SER B . n B 1 62 GLY 62 59 59 GLY GLY B . n B 1 63 GLY 63 60 60 GLY GLY B . n B 1 64 HIS 64 61 61 HIS HIS B . n B 1 65 PHE 65 62 62 PHE PHE B . n B 1 66 ASN 66 63 63 ASN ASN B . n B 1 67 PRO 67 64 64 PRO PRO B . n B 1 68 ALA 68 65 65 ALA ALA B . n B 1 69 VAL 69 66 66 VAL VAL B . n B 1 70 THR 70 67 67 THR THR B . n B 1 71 ILE 71 68 68 ILE ILE B . n B 1 72 GLY 72 69 69 GLY GLY B . n B 1 73 LEU 73 70 70 LEU LEU B . n B 1 74 TRP 74 71 71 TRP TRP B . n B 1 75 ALA 75 72 72 ALA ALA B . n B 1 76 GLY 76 73 73 GLY GLY B . n B 1 77 GLY 77 74 74 GLY GLY B . n B 1 78 ARG 78 75 75 ARG ARG B . n B 1 79 PHE 79 76 76 PHE PHE B . n B 1 80 PRO 80 77 77 PRO PRO B . n B 1 81 ALA 81 78 78 ALA ALA B . n B 1 82 LYS 82 79 79 LYS LYS B . n B 1 83 GLU 83 80 80 GLU GLU B . n B 1 84 VAL 84 81 81 VAL VAL B . n B 1 85 VAL 85 82 82 VAL VAL B . n B 1 86 GLY 86 83 83 GLY GLY B . n B 1 87 TYR 87 84 84 TYR TYR B . n B 1 88 VAL 88 85 85 VAL VAL B . n B 1 89 ILE 89 86 86 ILE ILE B . n B 1 90 ALA 90 87 87 ALA ALA B . n B 1 91 GLN 91 88 88 GLN GLN B . n B 1 92 VAL 92 89 89 VAL VAL B . n B 1 93 VAL 93 90 90 VAL VAL B . n B 1 94 GLY 94 91 91 GLY GLY B . n B 1 95 GLY 95 92 92 GLY GLY B . n B 1 96 ILE 96 93 93 ILE ILE B . n B 1 97 VAL 97 94 94 VAL VAL B . n B 1 98 ALA 98 95 95 ALA ALA B . n B 1 99 ALA 99 96 96 ALA ALA B . n B 1 100 ALA 100 97 97 ALA ALA B . n B 1 101 LEU 101 98 98 LEU LEU B . n B 1 102 LEU 102 99 99 LEU LEU B . n B 1 103 TYR 103 100 100 TYR TYR B . n B 1 104 LEU 104 101 101 LEU LEU B . n B 1 105 ILE 105 102 102 ILE ILE B . n B 1 106 ALA 106 103 103 ALA ALA B . n B 1 107 SER 107 104 104 SER SER B . n B 1 108 GLY 108 105 105 GLY GLY B . n B 1 109 LYS 109 106 106 LYS LYS B . n B 1 110 THR 110 107 107 THR THR B . n B 1 111 GLY 111 108 108 GLY GLY B . n B 1 112 PHE 112 109 109 PHE PHE B . n B 1 113 ASP 113 110 110 ASP ASP B . n B 1 114 ALA 114 111 111 ALA ALA B . n B 1 115 ALA 115 112 112 ALA ALA B . n B 1 116 ALA 116 113 113 ALA ALA B . n B 1 117 SER 117 114 114 SER SER B . n B 1 118 GLY 118 115 115 GLY GLY B . n B 1 119 PHE 119 116 116 PHE PHE B . n B 1 120 ALA 120 117 117 ALA ALA B . n B 1 121 SER 121 118 118 SER SER B . n B 1 122 ASN 122 119 119 ASN ASN B . n B 1 123 GLY 123 120 120 GLY GLY B . n B 1 124 TYR 124 121 121 TYR TYR B . n B 1 125 GLY 125 122 122 GLY GLY B . n B 1 126 GLU 126 123 123 GLU GLU B . n B 1 127 HIS 127 124 124 HIS HIS B . n B 1 128 SER 128 125 125 SER SER B . n B 1 129 PRO 129 126 126 PRO PRO B . n B 1 130 GLY 130 127 127 GLY GLY B . n B 1 131 GLY 131 128 128 GLY GLY B . n B 1 132 TYR 132 129 129 TYR TYR B . n B 1 133 SER 133 130 130 SER SER B . n B 1 134 MET 134 131 131 MET MET B . n B 1 135 LEU 135 132 132 LEU LEU B . n B 1 136 SER 136 133 133 SER SER B . n B 1 137 ALA 137 134 134 ALA ALA B . n B 1 138 LEU 138 135 135 LEU LEU B . n B 1 139 VAL 139 136 136 VAL VAL B . n B 1 140 VAL 140 137 137 VAL VAL B . n B 1 141 GLU 141 138 138 GLU GLU B . n B 1 142 LEU 142 139 139 LEU LEU B . n B 1 143 VAL 143 140 140 VAL VAL B . n B 1 144 LEU 144 141 141 LEU LEU B . n B 1 145 SER 145 142 142 SER SER B . n B 1 146 ALA 146 143 143 ALA ALA B . n B 1 147 GLY 147 144 144 GLY GLY B . n B 1 148 PHE 148 145 145 PHE PHE B . n B 1 149 LEU 149 146 146 LEU LEU B . n B 1 150 LEU 150 147 147 LEU LEU B . n B 1 151 VAL 151 148 148 VAL VAL B . n B 1 152 ILE 152 149 149 ILE ILE B . n B 1 153 HIS 153 150 150 HIS HIS B . n B 1 154 GLY 154 151 151 GLY GLY B . n B 1 155 ALA 155 152 152 ALA ALA B . n B 1 156 THR 156 153 153 THR THR B . n B 1 157 ASP 157 154 154 ASP ASP B . n B 1 158 LYS 158 155 155 LYS LYS B . n B 1 159 PHE 159 156 156 PHE PHE B . n B 1 160 ALA 160 157 157 ALA ALA B . n B 1 161 PRO 161 158 158 PRO PRO B . n B 1 162 ALA 162 159 159 ALA ALA B . n B 1 163 GLY 163 160 160 GLY GLY B . n B 1 164 PHE 164 161 161 PHE PHE B . n B 1 165 ALA 165 162 162 ALA ALA B . n B 1 166 PRO 166 163 163 PRO PRO B . n B 1 167 ILE 167 164 164 ILE ILE B . n B 1 168 ALA 168 165 165 ALA ALA B . n B 1 169 ILE 169 166 166 ILE ILE B . n B 1 170 GLY 170 167 167 GLY GLY B . n B 1 171 LEU 171 168 168 LEU LEU B . n B 1 172 ALA 172 169 169 ALA ALA B . n B 1 173 LEU 173 170 170 LEU LEU B . n B 1 174 THR 174 171 171 THR THR B . n B 1 175 LEU 175 172 172 LEU LEU B . n B 1 176 ILE 176 173 173 ILE ILE B . n B 1 177 GLY 177 174 174 GLY GLY B . n B 1 178 LEU 178 175 175 LEU LEU B . n B 1 179 ILE 179 176 176 ILE ILE B . n B 1 180 SER 180 177 177 SER SER B . n B 1 181 ILE 181 178 178 ILE ILE B . n B 1 182 PRO 182 179 179 PRO PRO B . n B 1 183 VAL 183 180 180 VAL VAL B . n B 1 184 THR 184 181 181 THR THR B . n B 1 185 ASN 185 182 182 ASN ASN B . n B 1 186 PHE 186 183 183 PHE PHE B . n B 1 187 SER 187 184 184 SER SER B . n B 1 188 VAL 188 185 185 VAL VAL B . n B 1 189 ASN 189 186 186 ASN ASN B . n B 1 190 PRO 190 187 187 PRO PRO B . n B 1 191 ALA 191 188 188 ALA ALA B . n B 1 192 ARG 192 189 189 ARG ARG B . n B 1 193 SER 193 190 190 SER SER B . n B 1 194 THR 194 191 191 THR THR B . n B 1 195 ALA 195 192 192 ALA ALA B . n B 1 196 VAL 196 193 193 VAL VAL B . n B 1 197 ALA 197 194 194 ALA ALA B . n B 1 198 ILE 198 195 195 ILE ILE B . n B 1 199 PHE 199 196 196 PHE PHE B . n B 1 200 GLN 200 197 197 GLN GLN B . n B 1 201 GLY 201 198 198 GLY GLY B . n B 1 202 GLY 202 199 199 GLY GLY B . n B 1 203 TRP 203 200 200 TRP TRP B . n B 1 204 ALA 204 201 201 ALA ALA B . n B 1 205 LEU 205 202 202 LEU LEU B . n B 1 206 GLU 206 203 203 GLU GLU B . n B 1 207 GLN 207 204 204 GLN GLN B . n B 1 208 LEU 208 205 205 LEU LEU B . n B 1 209 TRP 209 206 206 TRP TRP B . n B 1 210 PHE 210 207 207 PHE PHE B . n B 1 211 PHE 211 208 208 PHE PHE B . n B 1 212 TRP 212 209 209 TRP TRP B . n B 1 213 VAL 213 210 210 VAL VAL B . n B 1 214 VAL 214 211 211 VAL VAL B . n B 1 215 PRO 215 212 212 PRO PRO B . n B 1 216 ILE 216 213 213 ILE ILE B . n B 1 217 VAL 217 214 214 VAL VAL B . n B 1 218 GLY 218 215 215 GLY GLY B . n B 1 219 GLY 219 216 216 GLY GLY B . n B 1 220 ILE 220 217 217 ILE ILE B . n B 1 221 ILE 221 218 218 ILE ILE B . n B 1 222 GLY 222 219 219 GLY GLY B . n B 1 223 GLY 223 220 220 GLY GLY B . n B 1 224 LEU 224 221 221 LEU LEU B . n B 1 225 ILE 225 222 222 ILE ILE B . n B 1 226 TYR 226 223 223 TYR TYR B . n B 1 227 ARG 227 224 224 ARG ARG B . n B 1 228 THR 228 225 225 THR THR B . n B 1 229 LEU 229 226 226 LEU LEU B . n B 1 230 LEU 230 227 227 LEU LEU B . n B 1 231 GLU 231 228 228 GLU GLU B . n B 1 232 LYS 232 229 229 LYS LYS B . n B 1 233 ARG 233 230 230 ARG ARG B . n B 1 234 ASP 234 231 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BOG 1 232 1 BOG BOG A . D 2 BOG 1 233 2 BOG BOG A . E 2 BOG 1 234 3 BOG BOG A . F 3 HOH 1 235 2 HOH HOH A . F 3 HOH 2 236 3 HOH HOH A . F 3 HOH 3 237 4 HOH HOH A . F 3 HOH 4 238 5 HOH HOH A . F 3 HOH 5 239 7 HOH HOH A . F 3 HOH 6 240 11 HOH HOH A . F 3 HOH 7 241 12 HOH HOH A . G 3 HOH 1 232 1 HOH HOH B . G 3 HOH 2 233 8 HOH HOH B . G 3 HOH 3 234 9 HOH HOH B . G 3 HOH 4 235 10 HOH HOH B . G 3 HOH 5 236 13 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA tetrameric 4 2 author_and_software_defined_assembly PISA tetrameric 4 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2,3,4 A,C,D,E,F 2 1,5,6,7 B,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 13630 ? 1 MORE -163 ? 1 'SSA (A^2)' 28400 ? 2 'ABSA (A^2)' 16290 ? 2 MORE -131 ? 2 'SSA (A^2)' 32180 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,-y,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_555 -y,x,z 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 4_555 y,-x,z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 5 'crystal symmetry operation' 2_645 -x+1,-y-1,z -1.0000000000 0.0000000000 0.0000000000 92.8920000000 0.0000000000 -1.0000000000 0.0000000000 -92.8920000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 6 'crystal symmetry operation' 3_545 -y,x-1,z 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 -92.8920000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 7 'crystal symmetry operation' 4_655 y+1,-x,z 0.0000000000 1.0000000000 0.0000000000 92.8920000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-11-03 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-08 4 'Structure model' 1 3 2020-07-29 5 'Structure model' 1 4 2023-09-06 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Structure summary' 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Database references' 9 5 'Structure model' 'Refinement description' 10 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp 3 4 'Structure model' entity 4 4 'Structure model' pdbx_chem_comp_identifier 5 4 'Structure model' pdbx_entity_nonpoly 6 4 'Structure model' struct_ref_seq_dif 7 4 'Structure model' struct_site 8 4 'Structure model' struct_site_gen 9 5 'Structure model' chem_comp 10 5 'Structure model' chem_comp_atom 11 5 'Structure model' chem_comp_bond 12 5 'Structure model' database_2 13 5 'Structure model' pdbx_initial_refinement_model 14 5 'Structure model' struct_ncs_dom_lim # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_chem_comp.mon_nstd_flag' 4 4 'Structure model' '_chem_comp.name' 5 4 'Structure model' '_chem_comp.type' 6 4 'Structure model' '_entity.pdbx_description' 7 4 'Structure model' '_pdbx_entity_nonpoly.name' 8 4 'Structure model' '_struct_ref_seq_dif.details' 9 5 'Structure model' '_chem_comp.pdbx_synonyms' 10 5 'Structure model' '_database_2.pdbx_DOI' 11 5 'Structure model' '_database_2.pdbx_database_accession' 12 5 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 13 5 'Structure model' '_struct_ncs_dom_lim.beg_label_asym_id' 14 5 'Structure model' '_struct_ncs_dom_lim.beg_label_comp_id' 15 5 'Structure model' '_struct_ncs_dom_lim.beg_label_seq_id' 16 5 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 17 5 'Structure model' '_struct_ncs_dom_lim.end_label_asym_id' 18 5 'Structure model' '_struct_ncs_dom_lim.end_label_comp_id' 19 5 'Structure model' '_struct_ncs_dom_lim.end_label_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 13.4590 -14.1858 -10.8430 0.2408 0.3126 0.2530 0.1366 0.0755 -0.1538 2.0950 2.3125 0.4856 -0.0706 0.5160 -0.4256 0.1047 0.0248 -0.1295 0.4773 -0.4212 -0.3040 -0.4411 0.2434 0.3487 'X-RAY DIFFRACTION' 2 ? refined 37.6236 -29.0710 27.4993 0.3763 0.2250 0.2904 0.2133 0.1012 -0.0908 2.1161 3.4718 3.1376 0.1806 -0.3617 -0.0973 0.0761 0.1431 -0.2192 -0.3952 0.7120 0.3113 0.4705 -0.9609 -0.5901 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A -10 A 9999 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 B -10 B 9999 ? . . . . ? # _pdbx_phasing_MR.entry_id 3NKC _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 3.100 _pdbx_phasing_MR.d_res_low_rotation 19.670 _pdbx_phasing_MR.d_res_high_translation 3.100 _pdbx_phasing_MR.d_res_low_translation 19.670 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MOSFLM . ? package 'Andrew G.W. Leslie' andrew@mrc-lmb.cam.ac.uk 'data reduction' http://www.mrc-lmb.cam.ac.uk/harry/mosflm/ ? ? 2 SCALA 3.2.21 7/4/2006 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 3 PHASER 1.3.2 'Fri May 5 14:40:40 2006' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 4 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 5 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 ELVES . ? ? ? ? refinement ? ? ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B PHE 183 ? ? NH1 B ARG 189 ? ? 1.97 2 1 O A PHE 183 ? ? NH1 A ARG 189 ? ? 2.12 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CD A GLU 123 ? ? OE2 A GLU 123 ? ? 1.347 1.252 0.095 0.011 N 2 1 CD B GLU 123 ? ? OE2 B GLU 123 ? ? 1.331 1.252 0.079 0.011 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 31 ? ? 73.46 -38.59 2 1 HIS A 56 ? ? -64.54 1.02 3 1 PHE A 183 ? ? 73.52 113.42 4 1 SER A 184 ? ? -132.48 -82.26 5 1 VAL A 185 ? ? 33.12 41.96 6 1 ASN A 186 ? ? -163.84 89.79 7 1 TRP A 209 ? ? -99.39 -60.51 8 1 GLU A 228 ? ? -72.92 -136.15 9 1 HIS B 0 ? ? -34.74 125.75 10 1 GLU B 31 ? ? 75.39 -38.04 11 1 HIS B 56 ? ? -66.99 3.53 12 1 PHE B 183 ? ? 72.89 114.77 13 1 SER B 184 ? ? -132.06 -82.28 14 1 VAL B 185 ? ? 32.21 42.48 15 1 ASN B 186 ? ? -162.18 83.92 16 1 GLU B 228 ? ? -73.14 -129.37 17 1 LYS B 229 ? ? -35.44 109.73 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA -2 ? A ALA 1 2 1 Y 1 A ARG 230 ? A ARG 233 3 1 Y 1 A ASP 231 ? A ASP 234 4 1 Y 1 B ASP 231 ? B ASP 234 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BOG C1 C N R 74 BOG O1 O N N 75 BOG C2 C N R 76 BOG O2 O N N 77 BOG C3 C N S 78 BOG O3 O N N 79 BOG C4 C N S 80 BOG O4 O N N 81 BOG C5 C N R 82 BOG O5 O N N 83 BOG C6 C N N 84 BOG O6 O N N 85 BOG "C1'" C N N 86 BOG "C2'" C N N 87 BOG "C3'" C N N 88 BOG "C4'" C N N 89 BOG "C5'" C N N 90 BOG "C6'" C N N 91 BOG "C7'" C N N 92 BOG "C8'" C N N 93 BOG H1 H N N 94 BOG H2 H N N 95 BOG HO2 H N N 96 BOG H3 H N N 97 BOG HO3 H N N 98 BOG H4 H N N 99 BOG HO4 H N N 100 BOG H5 H N N 101 BOG H61 H N N 102 BOG H62 H N N 103 BOG HO6 H N N 104 BOG "H1'1" H N N 105 BOG "H1'2" H N N 106 BOG "H2'1" H N N 107 BOG "H2'2" H N N 108 BOG "H3'1" H N N 109 BOG "H3'2" H N N 110 BOG "H4'1" H N N 111 BOG "H4'2" H N N 112 BOG "H5'1" H N N 113 BOG "H5'2" H N N 114 BOG "H6'1" H N N 115 BOG "H6'2" H N N 116 BOG "H7'1" H N N 117 BOG "H7'2" H N N 118 BOG "H8'1" H N N 119 BOG "H8'2" H N N 120 BOG "H8'3" H N N 121 CYS N N N N 122 CYS CA C N R 123 CYS C C N N 124 CYS O O N N 125 CYS CB C N N 126 CYS SG S N N 127 CYS OXT O N N 128 CYS H H N N 129 CYS H2 H N N 130 CYS HA H N N 131 CYS HB2 H N N 132 CYS HB3 H N N 133 CYS HG H N N 134 CYS HXT H N N 135 GLN N N N N 136 GLN CA C N S 137 GLN C C N N 138 GLN O O N N 139 GLN CB C N N 140 GLN CG C N N 141 GLN CD C N N 142 GLN OE1 O N N 143 GLN NE2 N N N 144 GLN OXT O N N 145 GLN H H N N 146 GLN H2 H N N 147 GLN HA H N N 148 GLN HB2 H N N 149 GLN HB3 H N N 150 GLN HG2 H N N 151 GLN HG3 H N N 152 GLN HE21 H N N 153 GLN HE22 H N N 154 GLN HXT H N N 155 GLU N N N N 156 GLU CA C N S 157 GLU C C N N 158 GLU O O N N 159 GLU CB C N N 160 GLU CG C N N 161 GLU CD C N N 162 GLU OE1 O N N 163 GLU OE2 O N N 164 GLU OXT O N N 165 GLU H H N N 166 GLU H2 H N N 167 GLU HA H N N 168 GLU HB2 H N N 169 GLU HB3 H N N 170 GLU HG2 H N N 171 GLU HG3 H N N 172 GLU HE2 H N N 173 GLU HXT H N N 174 GLY N N N N 175 GLY CA C N N 176 GLY C C N N 177 GLY O O N N 178 GLY OXT O N N 179 GLY H H N N 180 GLY H2 H N N 181 GLY HA2 H N N 182 GLY HA3 H N N 183 GLY HXT H N N 184 HIS N N N N 185 HIS CA C N S 186 HIS C C N N 187 HIS O O N N 188 HIS CB C N N 189 HIS CG C Y N 190 HIS ND1 N Y N 191 HIS CD2 C Y N 192 HIS CE1 C Y N 193 HIS NE2 N Y N 194 HIS OXT O N N 195 HIS H H N N 196 HIS H2 H N N 197 HIS HA H N N 198 HIS HB2 H N N 199 HIS HB3 H N N 200 HIS HD1 H N N 201 HIS HD2 H N N 202 HIS HE1 H N N 203 HIS HE2 H N N 204 HIS HXT H N N 205 HOH O O N N 206 HOH H1 H N N 207 HOH H2 H N N 208 ILE N N N N 209 ILE CA C N S 210 ILE C C N N 211 ILE O O N N 212 ILE CB C N S 213 ILE CG1 C N N 214 ILE CG2 C N N 215 ILE CD1 C N N 216 ILE OXT O N N 217 ILE H H N N 218 ILE H2 H N N 219 ILE HA H N N 220 ILE HB H N N 221 ILE HG12 H N N 222 ILE HG13 H N N 223 ILE HG21 H N N 224 ILE HG22 H N N 225 ILE HG23 H N N 226 ILE HD11 H N N 227 ILE HD12 H N N 228 ILE HD13 H N N 229 ILE HXT H N N 230 LEU N N N N 231 LEU CA C N S 232 LEU C C N N 233 LEU O O N N 234 LEU CB C N N 235 LEU CG C N N 236 LEU CD1 C N N 237 LEU CD2 C N N 238 LEU OXT O N N 239 LEU H H N N 240 LEU H2 H N N 241 LEU HA H N N 242 LEU HB2 H N N 243 LEU HB3 H N N 244 LEU HG H N N 245 LEU HD11 H N N 246 LEU HD12 H N N 247 LEU HD13 H N N 248 LEU HD21 H N N 249 LEU HD22 H N N 250 LEU HD23 H N N 251 LEU HXT H N N 252 LYS N N N N 253 LYS CA C N S 254 LYS C C N N 255 LYS O O N N 256 LYS CB C N N 257 LYS CG C N N 258 LYS CD C N N 259 LYS CE C N N 260 LYS NZ N N N 261 LYS OXT O N N 262 LYS H H N N 263 LYS H2 H N N 264 LYS HA H N N 265 LYS HB2 H N N 266 LYS HB3 H N N 267 LYS HG2 H N N 268 LYS HG3 H N N 269 LYS HD2 H N N 270 LYS HD3 H N N 271 LYS HE2 H N N 272 LYS HE3 H N N 273 LYS HZ1 H N N 274 LYS HZ2 H N N 275 LYS HZ3 H N N 276 LYS HXT H N N 277 MET N N N N 278 MET CA C N S 279 MET C C N N 280 MET O O N N 281 MET CB C N N 282 MET CG C N N 283 MET SD S N N 284 MET CE C N N 285 MET OXT O N N 286 MET H H N N 287 MET H2 H N N 288 MET HA H N N 289 MET HB2 H N N 290 MET HB3 H N N 291 MET HG2 H N N 292 MET HG3 H N N 293 MET HE1 H N N 294 MET HE2 H N N 295 MET HE3 H N N 296 MET HXT H N N 297 PHE N N N N 298 PHE CA C N S 299 PHE C C N N 300 PHE O O N N 301 PHE CB C N N 302 PHE CG C Y N 303 PHE CD1 C Y N 304 PHE CD2 C Y N 305 PHE CE1 C Y N 306 PHE CE2 C Y N 307 PHE CZ C Y N 308 PHE OXT O N N 309 PHE H H N N 310 PHE H2 H N N 311 PHE HA H N N 312 PHE HB2 H N N 313 PHE HB3 H N N 314 PHE HD1 H N N 315 PHE HD2 H N N 316 PHE HE1 H N N 317 PHE HE2 H N N 318 PHE HZ H N N 319 PHE HXT H N N 320 PRO N N N N 321 PRO CA C N S 322 PRO C C N N 323 PRO O O N N 324 PRO CB C N N 325 PRO CG C N N 326 PRO CD C N N 327 PRO OXT O N N 328 PRO H H N N 329 PRO HA H N N 330 PRO HB2 H N N 331 PRO HB3 H N N 332 PRO HG2 H N N 333 PRO HG3 H N N 334 PRO HD2 H N N 335 PRO HD3 H N N 336 PRO HXT H N N 337 SER N N N N 338 SER CA C N S 339 SER C C N N 340 SER O O N N 341 SER CB C N N 342 SER OG O N N 343 SER OXT O N N 344 SER H H N N 345 SER H2 H N N 346 SER HA H N N 347 SER HB2 H N N 348 SER HB3 H N N 349 SER HG H N N 350 SER HXT H N N 351 THR N N N N 352 THR CA C N S 353 THR C C N N 354 THR O O N N 355 THR CB C N R 356 THR OG1 O N N 357 THR CG2 C N N 358 THR OXT O N N 359 THR H H N N 360 THR H2 H N N 361 THR HA H N N 362 THR HB H N N 363 THR HG1 H N N 364 THR HG21 H N N 365 THR HG22 H N N 366 THR HG23 H N N 367 THR HXT H N N 368 TRP N N N N 369 TRP CA C N S 370 TRP C C N N 371 TRP O O N N 372 TRP CB C N N 373 TRP CG C Y N 374 TRP CD1 C Y N 375 TRP CD2 C Y N 376 TRP NE1 N Y N 377 TRP CE2 C Y N 378 TRP CE3 C Y N 379 TRP CZ2 C Y N 380 TRP CZ3 C Y N 381 TRP CH2 C Y N 382 TRP OXT O N N 383 TRP H H N N 384 TRP H2 H N N 385 TRP HA H N N 386 TRP HB2 H N N 387 TRP HB3 H N N 388 TRP HD1 H N N 389 TRP HE1 H N N 390 TRP HE3 H N N 391 TRP HZ2 H N N 392 TRP HZ3 H N N 393 TRP HH2 H N N 394 TRP HXT H N N 395 TYR N N N N 396 TYR CA C N S 397 TYR C C N N 398 TYR O O N N 399 TYR CB C N N 400 TYR CG C Y N 401 TYR CD1 C Y N 402 TYR CD2 C Y N 403 TYR CE1 C Y N 404 TYR CE2 C Y N 405 TYR CZ C Y N 406 TYR OH O N N 407 TYR OXT O N N 408 TYR H H N N 409 TYR H2 H N N 410 TYR HA H N N 411 TYR HB2 H N N 412 TYR HB3 H N N 413 TYR HD1 H N N 414 TYR HD2 H N N 415 TYR HE1 H N N 416 TYR HE2 H N N 417 TYR HH H N N 418 TYR HXT H N N 419 VAL N N N N 420 VAL CA C N S 421 VAL C C N N 422 VAL O O N N 423 VAL CB C N N 424 VAL CG1 C N N 425 VAL CG2 C N N 426 VAL OXT O N N 427 VAL H H N N 428 VAL H2 H N N 429 VAL HA H N N 430 VAL HB H N N 431 VAL HG11 H N N 432 VAL HG12 H N N 433 VAL HG13 H N N 434 VAL HG21 H N N 435 VAL HG22 H N N 436 VAL HG23 H N N 437 VAL HXT H N N 438 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BOG C1 O1 sing N N 70 BOG C1 C2 sing N N 71 BOG C1 O5 sing N N 72 BOG C1 H1 sing N N 73 BOG O1 "C1'" sing N N 74 BOG C2 O2 sing N N 75 BOG C2 C3 sing N N 76 BOG C2 H2 sing N N 77 BOG O2 HO2 sing N N 78 BOG C3 O3 sing N N 79 BOG C3 C4 sing N N 80 BOG C3 H3 sing N N 81 BOG O3 HO3 sing N N 82 BOG C4 O4 sing N N 83 BOG C4 C5 sing N N 84 BOG C4 H4 sing N N 85 BOG O4 HO4 sing N N 86 BOG C5 O5 sing N N 87 BOG C5 C6 sing N N 88 BOG C5 H5 sing N N 89 BOG C6 O6 sing N N 90 BOG C6 H61 sing N N 91 BOG C6 H62 sing N N 92 BOG O6 HO6 sing N N 93 BOG "C1'" "C2'" sing N N 94 BOG "C1'" "H1'1" sing N N 95 BOG "C1'" "H1'2" sing N N 96 BOG "C2'" "C3'" sing N N 97 BOG "C2'" "H2'1" sing N N 98 BOG "C2'" "H2'2" sing N N 99 BOG "C3'" "C4'" sing N N 100 BOG "C3'" "H3'1" sing N N 101 BOG "C3'" "H3'2" sing N N 102 BOG "C4'" "C5'" sing N N 103 BOG "C4'" "H4'1" sing N N 104 BOG "C4'" "H4'2" sing N N 105 BOG "C5'" "C6'" sing N N 106 BOG "C5'" "H5'1" sing N N 107 BOG "C5'" "H5'2" sing N N 108 BOG "C6'" "C7'" sing N N 109 BOG "C6'" "H6'1" sing N N 110 BOG "C6'" "H6'2" sing N N 111 BOG "C7'" "C8'" sing N N 112 BOG "C7'" "H7'1" sing N N 113 BOG "C7'" "H7'2" sing N N 114 BOG "C8'" "H8'1" sing N N 115 BOG "C8'" "H8'2" sing N N 116 BOG "C8'" "H8'3" sing N N 117 CYS N CA sing N N 118 CYS N H sing N N 119 CYS N H2 sing N N 120 CYS CA C sing N N 121 CYS CA CB sing N N 122 CYS CA HA sing N N 123 CYS C O doub N N 124 CYS C OXT sing N N 125 CYS CB SG sing N N 126 CYS CB HB2 sing N N 127 CYS CB HB3 sing N N 128 CYS SG HG sing N N 129 CYS OXT HXT sing N N 130 GLN N CA sing N N 131 GLN N H sing N N 132 GLN N H2 sing N N 133 GLN CA C sing N N 134 GLN CA CB sing N N 135 GLN CA HA sing N N 136 GLN C O doub N N 137 GLN C OXT sing N N 138 GLN CB CG sing N N 139 GLN CB HB2 sing N N 140 GLN CB HB3 sing N N 141 GLN CG CD sing N N 142 GLN CG HG2 sing N N 143 GLN CG HG3 sing N N 144 GLN CD OE1 doub N N 145 GLN CD NE2 sing N N 146 GLN NE2 HE21 sing N N 147 GLN NE2 HE22 sing N N 148 GLN OXT HXT sing N N 149 GLU N CA sing N N 150 GLU N H sing N N 151 GLU N H2 sing N N 152 GLU CA C sing N N 153 GLU CA CB sing N N 154 GLU CA HA sing N N 155 GLU C O doub N N 156 GLU C OXT sing N N 157 GLU CB CG sing N N 158 GLU CB HB2 sing N N 159 GLU CB HB3 sing N N 160 GLU CG CD sing N N 161 GLU CG HG2 sing N N 162 GLU CG HG3 sing N N 163 GLU CD OE1 doub N N 164 GLU CD OE2 sing N N 165 GLU OE2 HE2 sing N N 166 GLU OXT HXT sing N N 167 GLY N CA sing N N 168 GLY N H sing N N 169 GLY N H2 sing N N 170 GLY CA C sing N N 171 GLY CA HA2 sing N N 172 GLY CA HA3 sing N N 173 GLY C O doub N N 174 GLY C OXT sing N N 175 GLY OXT HXT sing N N 176 HIS N CA sing N N 177 HIS N H sing N N 178 HIS N H2 sing N N 179 HIS CA C sing N N 180 HIS CA CB sing N N 181 HIS CA HA sing N N 182 HIS C O doub N N 183 HIS C OXT sing N N 184 HIS CB CG sing N N 185 HIS CB HB2 sing N N 186 HIS CB HB3 sing N N 187 HIS CG ND1 sing Y N 188 HIS CG CD2 doub Y N 189 HIS ND1 CE1 doub Y N 190 HIS ND1 HD1 sing N N 191 HIS CD2 NE2 sing Y N 192 HIS CD2 HD2 sing N N 193 HIS CE1 NE2 sing Y N 194 HIS CE1 HE1 sing N N 195 HIS NE2 HE2 sing N N 196 HIS OXT HXT sing N N 197 HOH O H1 sing N N 198 HOH O H2 sing N N 199 ILE N CA sing N N 200 ILE N H sing N N 201 ILE N H2 sing N N 202 ILE CA C sing N N 203 ILE CA CB sing N N 204 ILE CA HA sing N N 205 ILE C O doub N N 206 ILE C OXT sing N N 207 ILE CB CG1 sing N N 208 ILE CB CG2 sing N N 209 ILE CB HB sing N N 210 ILE CG1 CD1 sing N N 211 ILE CG1 HG12 sing N N 212 ILE CG1 HG13 sing N N 213 ILE CG2 HG21 sing N N 214 ILE CG2 HG22 sing N N 215 ILE CG2 HG23 sing N N 216 ILE CD1 HD11 sing N N 217 ILE CD1 HD12 sing N N 218 ILE CD1 HD13 sing N N 219 ILE OXT HXT sing N N 220 LEU N CA sing N N 221 LEU N H sing N N 222 LEU N H2 sing N N 223 LEU CA C sing N N 224 LEU CA CB sing N N 225 LEU CA HA sing N N 226 LEU C O doub N N 227 LEU C OXT sing N N 228 LEU CB CG sing N N 229 LEU CB HB2 sing N N 230 LEU CB HB3 sing N N 231 LEU CG CD1 sing N N 232 LEU CG CD2 sing N N 233 LEU CG HG sing N N 234 LEU CD1 HD11 sing N N 235 LEU CD1 HD12 sing N N 236 LEU CD1 HD13 sing N N 237 LEU CD2 HD21 sing N N 238 LEU CD2 HD22 sing N N 239 LEU CD2 HD23 sing N N 240 LEU OXT HXT sing N N 241 LYS N CA sing N N 242 LYS N H sing N N 243 LYS N H2 sing N N 244 LYS CA C sing N N 245 LYS CA CB sing N N 246 LYS CA HA sing N N 247 LYS C O doub N N 248 LYS C OXT sing N N 249 LYS CB CG sing N N 250 LYS CB HB2 sing N N 251 LYS CB HB3 sing N N 252 LYS CG CD sing N N 253 LYS CG HG2 sing N N 254 LYS CG HG3 sing N N 255 LYS CD CE sing N N 256 LYS CD HD2 sing N N 257 LYS CD HD3 sing N N 258 LYS CE NZ sing N N 259 LYS CE HE2 sing N N 260 LYS CE HE3 sing N N 261 LYS NZ HZ1 sing N N 262 LYS NZ HZ2 sing N N 263 LYS NZ HZ3 sing N N 264 LYS OXT HXT sing N N 265 MET N CA sing N N 266 MET N H sing N N 267 MET N H2 sing N N 268 MET CA C sing N N 269 MET CA CB sing N N 270 MET CA HA sing N N 271 MET C O doub N N 272 MET C OXT sing N N 273 MET CB CG sing N N 274 MET CB HB2 sing N N 275 MET CB HB3 sing N N 276 MET CG SD sing N N 277 MET CG HG2 sing N N 278 MET CG HG3 sing N N 279 MET SD CE sing N N 280 MET CE HE1 sing N N 281 MET CE HE2 sing N N 282 MET CE HE3 sing N N 283 MET OXT HXT sing N N 284 PHE N CA sing N N 285 PHE N H sing N N 286 PHE N H2 sing N N 287 PHE CA C sing N N 288 PHE CA CB sing N N 289 PHE CA HA sing N N 290 PHE C O doub N N 291 PHE C OXT sing N N 292 PHE CB CG sing N N 293 PHE CB HB2 sing N N 294 PHE CB HB3 sing N N 295 PHE CG CD1 doub Y N 296 PHE CG CD2 sing Y N 297 PHE CD1 CE1 sing Y N 298 PHE CD1 HD1 sing N N 299 PHE CD2 CE2 doub Y N 300 PHE CD2 HD2 sing N N 301 PHE CE1 CZ doub Y N 302 PHE CE1 HE1 sing N N 303 PHE CE2 CZ sing Y N 304 PHE CE2 HE2 sing N N 305 PHE CZ HZ sing N N 306 PHE OXT HXT sing N N 307 PRO N CA sing N N 308 PRO N CD sing N N 309 PRO N H sing N N 310 PRO CA C sing N N 311 PRO CA CB sing N N 312 PRO CA HA sing N N 313 PRO C O doub N N 314 PRO C OXT sing N N 315 PRO CB CG sing N N 316 PRO CB HB2 sing N N 317 PRO CB HB3 sing N N 318 PRO CG CD sing N N 319 PRO CG HG2 sing N N 320 PRO CG HG3 sing N N 321 PRO CD HD2 sing N N 322 PRO CD HD3 sing N N 323 PRO OXT HXT sing N N 324 SER N CA sing N N 325 SER N H sing N N 326 SER N H2 sing N N 327 SER CA C sing N N 328 SER CA CB sing N N 329 SER CA HA sing N N 330 SER C O doub N N 331 SER C OXT sing N N 332 SER CB OG sing N N 333 SER CB HB2 sing N N 334 SER CB HB3 sing N N 335 SER OG HG sing N N 336 SER OXT HXT sing N N 337 THR N CA sing N N 338 THR N H sing N N 339 THR N H2 sing N N 340 THR CA C sing N N 341 THR CA CB sing N N 342 THR CA HA sing N N 343 THR C O doub N N 344 THR C OXT sing N N 345 THR CB OG1 sing N N 346 THR CB CG2 sing N N 347 THR CB HB sing N N 348 THR OG1 HG1 sing N N 349 THR CG2 HG21 sing N N 350 THR CG2 HG22 sing N N 351 THR CG2 HG23 sing N N 352 THR OXT HXT sing N N 353 TRP N CA sing N N 354 TRP N H sing N N 355 TRP N H2 sing N N 356 TRP CA C sing N N 357 TRP CA CB sing N N 358 TRP CA HA sing N N 359 TRP C O doub N N 360 TRP C OXT sing N N 361 TRP CB CG sing N N 362 TRP CB HB2 sing N N 363 TRP CB HB3 sing N N 364 TRP CG CD1 doub Y N 365 TRP CG CD2 sing Y N 366 TRP CD1 NE1 sing Y N 367 TRP CD1 HD1 sing N N 368 TRP CD2 CE2 doub Y N 369 TRP CD2 CE3 sing Y N 370 TRP NE1 CE2 sing Y N 371 TRP NE1 HE1 sing N N 372 TRP CE2 CZ2 sing Y N 373 TRP CE3 CZ3 doub Y N 374 TRP CE3 HE3 sing N N 375 TRP CZ2 CH2 doub Y N 376 TRP CZ2 HZ2 sing N N 377 TRP CZ3 CH2 sing Y N 378 TRP CZ3 HZ3 sing N N 379 TRP CH2 HH2 sing N N 380 TRP OXT HXT sing N N 381 TYR N CA sing N N 382 TYR N H sing N N 383 TYR N H2 sing N N 384 TYR CA C sing N N 385 TYR CA CB sing N N 386 TYR CA HA sing N N 387 TYR C O doub N N 388 TYR C OXT sing N N 389 TYR CB CG sing N N 390 TYR CB HB2 sing N N 391 TYR CB HB3 sing N N 392 TYR CG CD1 doub Y N 393 TYR CG CD2 sing Y N 394 TYR CD1 CE1 sing Y N 395 TYR CD1 HD1 sing N N 396 TYR CD2 CE2 doub Y N 397 TYR CD2 HD2 sing N N 398 TYR CE1 CZ doub Y N 399 TYR CE1 HE1 sing N N 400 TYR CE2 CZ sing Y N 401 TYR CE2 HE2 sing N N 402 TYR CZ OH sing N N 403 TYR OH HH sing N N 404 TYR OXT HXT sing N N 405 VAL N CA sing N N 406 VAL N H sing N N 407 VAL N H2 sing N N 408 VAL CA C sing N N 409 VAL CA CB sing N N 410 VAL CA HA sing N N 411 VAL C O doub N N 412 VAL C OXT sing N N 413 VAL CB CG1 sing N N 414 VAL CB CG2 sing N N 415 VAL CB HB sing N N 416 VAL CG1 HG11 sing N N 417 VAL CG1 HG12 sing N N 418 VAL CG1 HG13 sing N N 419 VAL CG2 HG21 sing N N 420 VAL CG2 HG22 sing N N 421 VAL CG2 HG23 sing N N 422 VAL OXT HXT sing N N 423 # _pdbx_chem_comp_identifier.comp_id BOG _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1.0 _pdbx_chem_comp_identifier.identifier b-octylglucoside # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'octyl beta-D-glucopyranoside' BOG 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2O9F _pdbx_initial_refinement_model.details 'PDB entry 2O9F' #