HEADER OXIDOREDUCTASE/LYASE 20-JUN-10 3NKL TITLE CRYSTAL STRUCTURE OF UDP-D-QUINOVOSAMINE 4-DEHYDROGENASE FROM VIBRIO TITLE 2 FISCHERI COMPND MOL_ID: 1; COMPND 2 MOLECULE: UDP-D-QUINOVOSAMINE 4-DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 144-281; COMPND 5 EC: 1.1.1.-, 4.2.1.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO FISCHERI; SOURCE 3 ORGANISM_TAXID: 312309; SOURCE 4 STRAIN: ES114; SOURCE 5 GENE: VF_0197; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS ALPHA-BETA FOLD, STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, KEYWDS 3 OXIDOREDUCTASE-LYASE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,J.MACK,K.BUCK,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 1 18-AUG-10 3NKL 0 JRNL AUTH Y.KIM,J.MACK,K.BUCK,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF UDP-D-QUINOVOSAMINE 4-DEHYDROGENASE JRNL TITL 2 FROM VIBRIO FISCHERI JRNL REF TO BE PUBLISHED 2010 JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6_289) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.22 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 3 NUMBER OF REFLECTIONS : 25491 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 1281 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.2274 - 3.9483 0.99 2883 185 0.1488 0.1610 REMARK 3 2 3.9483 - 3.1342 1.00 2874 156 0.1605 0.1684 REMARK 3 3 3.1342 - 2.7381 1.00 2857 138 0.1754 0.2592 REMARK 3 4 2.7381 - 2.4878 0.99 2824 127 0.1848 0.2247 REMARK 3 5 2.4878 - 2.3095 0.99 2822 153 0.1642 0.1956 REMARK 3 6 2.3095 - 2.1734 0.99 2768 152 0.1483 0.1834 REMARK 3 7 2.1734 - 2.0645 0.98 2818 152 0.1584 0.1957 REMARK 3 8 2.0645 - 1.9746 0.88 2486 116 0.1741 0.2186 REMARK 3 9 1.9746 - 1.8986 0.66 1878 102 0.2021 0.2517 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 42.65 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.67 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -6.31120 REMARK 3 B22 (A**2) : 5.07560 REMARK 3 B33 (A**2) : 1.23560 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.43540 REMARK 3 B23 (A**2) : -0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2058 REMARK 3 ANGLE : 1.216 2774 REMARK 3 CHIRALITY : 0.091 326 REMARK 3 PLANARITY : 0.005 343 REMARK 3 DIHEDRAL : 16.230 794 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 1.5906 12.4209 17.5411 REMARK 3 T TENSOR REMARK 3 T11: 0.1628 T22: 0.2633 REMARK 3 T33: 0.1042 T12: 0.0733 REMARK 3 T13: 0.0048 T23: 0.0058 REMARK 3 L TENSOR REMARK 3 L11: 3.3208 L22: 1.9035 REMARK 3 L33: 2.7546 L12: 0.2217 REMARK 3 L13: -0.2141 L23: 0.1722 REMARK 3 S TENSOR REMARK 3 S11: 0.0225 S12: 0.5638 S13: 0.1003 REMARK 3 S21: -0.2230 S22: -0.0823 S23: 0.0471 REMARK 3 S31: -0.0079 S32: -0.1043 S33: 0.0683 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 22.3627 2.7789 25.3528 REMARK 3 T TENSOR REMARK 3 T11: 0.0035 T22: 0.0413 REMARK 3 T33: 0.0859 T12: 0.0043 REMARK 3 T13: 0.0054 T23: -0.0063 REMARK 3 L TENSOR REMARK 3 L11: 3.4071 L22: 2.9615 REMARK 3 L33: 1.4216 L12: -2.0041 REMARK 3 L13: 0.4892 L23: 0.1000 REMARK 3 S TENSOR REMARK 3 S11: 0.1086 S12: 0.3592 S13: -0.0326 REMARK 3 S21: 0.0087 S22: -0.1432 S23: -0.1118 REMARK 3 S31: 0.0512 S32: -0.0112 S33: 0.0358 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3NKL COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-JUN-10. REMARK 100 THE RCSB ID CODE IS RCSB059946. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97931 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25582 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.6 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05100 REMARK 200 FOR THE DATA SET : 13.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 62.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.34100 REMARK 200 FOR SHELL : 4.260 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL3000, SHELXS,MLPHARE,BUCCANEER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM SULFATE, 0.1 M HEPES PH REMARK 280 7.5, 25 %W/V POLYEHTLYENE GLYCOL 3,350, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 54.13100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.68950 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 54.13100 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 22.68950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -94.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ARG A 122 REMARK 465 VAL A 123 REMARK 465 ALA A 124 REMARK 465 VAL A 125 REMARK 465 THR A 126 REMARK 465 PRO A 127 REMARK 465 GLN A 128 REMARK 465 ALA A 129 REMARK 465 GLU A 130 REMARK 465 LEU A 131 REMARK 465 MSE A 132 REMARK 465 GLU A 133 REMARK 465 ALA A 134 REMARK 465 ASN A 135 REMARK 465 ILE A 136 REMARK 465 LYS A 137 REMARK 465 ASP A 138 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 VAL B 123 REMARK 465 ALA B 124 REMARK 465 VAL B 125 REMARK 465 THR B 126 REMARK 465 PRO B 127 REMARK 465 GLN B 128 REMARK 465 ALA B 129 REMARK 465 GLU B 130 REMARK 465 LEU B 131 REMARK 465 MSE B 132 REMARK 465 GLU B 133 REMARK 465 ALA B 134 REMARK 465 ASN B 135 REMARK 465 ILE B 136 REMARK 465 LYS B 137 REMARK 465 ASP B 138 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 98 CA - CB - CG ANGL. DEV. = -14.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 141 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 142 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 143 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 144 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 145 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 139 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 141 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 143 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 144 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC64246.2 RELATED DB: TARGETDB DBREF 3NKL A 1 138 UNP Q5E8F4 Q5E8F4_VIBF1 144 281 DBREF 3NKL B 1 138 UNP Q5E8F4 Q5E8F4_VIBF1 144 281 SEQADV 3NKL SER A -2 UNP Q5E8F4 EXPRESSION TAG SEQADV 3NKL ASN A -1 UNP Q5E8F4 EXPRESSION TAG SEQADV 3NKL ALA A 0 UNP Q5E8F4 EXPRESSION TAG SEQADV 3NKL SER B -2 UNP Q5E8F4 EXPRESSION TAG SEQADV 3NKL ASN B -1 UNP Q5E8F4 EXPRESSION TAG SEQADV 3NKL ALA B 0 UNP Q5E8F4 EXPRESSION TAG SEQRES 1 A 141 SER ASN ALA LYS LYS LYS VAL LEU ILE TYR GLY ALA GLY SEQRES 2 A 141 SER ALA GLY LEU GLN LEU ALA ASN MSE LEU ARG GLN GLY SEQRES 3 A 141 LYS GLU PHE HIS PRO ILE ALA PHE ILE ASP ASP ASP ARG SEQRES 4 A 141 LYS LYS HIS LYS THR THR MSE GLN GLY ILE THR ILE TYR SEQRES 5 A 141 ARG PRO LYS TYR LEU GLU ARG LEU ILE LYS LYS HIS CYS SEQRES 6 A 141 ILE SER THR VAL LEU LEU ALA VAL PRO SER ALA SER GLN SEQRES 7 A 141 VAL GLN LYS LYS VAL ILE ILE GLU SER LEU ALA LYS LEU SEQRES 8 A 141 HIS VAL GLU VAL LEU THR ILE PRO ASN LEU ASP ASP LEU SEQRES 9 A 141 VAL ASN GLY LYS LEU SER ILE GLY GLN LEU LYS GLU VAL SEQRES 10 A 141 SER ILE ASP ASP LEU LEU GLY ARG VAL ALA VAL THR PRO SEQRES 11 A 141 GLN ALA GLU LEU MSE GLU ALA ASN ILE LYS ASP SEQRES 1 B 141 SER ASN ALA LYS LYS LYS VAL LEU ILE TYR GLY ALA GLY SEQRES 2 B 141 SER ALA GLY LEU GLN LEU ALA ASN MSE LEU ARG GLN GLY SEQRES 3 B 141 LYS GLU PHE HIS PRO ILE ALA PHE ILE ASP ASP ASP ARG SEQRES 4 B 141 LYS LYS HIS LYS THR THR MSE GLN GLY ILE THR ILE TYR SEQRES 5 B 141 ARG PRO LYS TYR LEU GLU ARG LEU ILE LYS LYS HIS CYS SEQRES 6 B 141 ILE SER THR VAL LEU LEU ALA VAL PRO SER ALA SER GLN SEQRES 7 B 141 VAL GLN LYS LYS VAL ILE ILE GLU SER LEU ALA LYS LEU SEQRES 8 B 141 HIS VAL GLU VAL LEU THR ILE PRO ASN LEU ASP ASP LEU SEQRES 9 B 141 VAL ASN GLY LYS LEU SER ILE GLY GLN LEU LYS GLU VAL SEQRES 10 B 141 SER ILE ASP ASP LEU LEU GLY ARG VAL ALA VAL THR PRO SEQRES 11 B 141 GLN ALA GLU LEU MSE GLU ALA ASN ILE LYS ASP MODRES 3NKL MSE A 19 MET SELENOMETHIONINE MODRES 3NKL MSE A 43 MET SELENOMETHIONINE MODRES 3NKL MSE B 19 MET SELENOMETHIONINE MODRES 3NKL MSE B 43 MET SELENOMETHIONINE HET MSE A 19 8 HET MSE A 43 8 HET MSE B 19 16 HET MSE B 43 16 HET SO4 A 141 5 HET GOL A 142 12 HET SO4 A 143 5 HET ACY A 144 4 HET SO4 A 145 5 HET GOL A 139 6 HET CL B 141 1 HET SO4 B 143 5 HET SO4 B 144 5 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETNAM ACY ACETIC ACID HETNAM CL CHLORIDE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 SO4 5(O4 S 2-) FORMUL 4 GOL 2(C3 H8 O3) FORMUL 6 ACY C2 H4 O2 FORMUL 9 CL CL 1- FORMUL 12 HOH *244(H2 O) HELIX 1 1 GLY A 10 GLY A 23 1 14 HELIX 2 2 ASP A 35 HIS A 39 5 5 HELIX 3 3 ARG A 50 LYS A 52 5 3 HELIX 4 4 TYR A 53 CYS A 62 1 10 HELIX 5 5 SER A 74 LYS A 87 1 14 HELIX 6 6 ASN A 97 ASN A 103 1 7 HELIX 7 7 SER A 115 GLY A 121 1 7 HELIX 8 8 GLY B 10 GLY B 23 1 14 HELIX 9 9 ASP B 35 HIS B 39 5 5 HELIX 10 10 ARG B 50 LYS B 52 5 3 HELIX 11 11 TYR B 53 CYS B 62 1 10 HELIX 12 12 SER B 74 LYS B 87 1 14 HELIX 13 13 ASN B 97 ASN B 103 1 7 HELIX 14 14 SER B 115 GLY B 121 1 7 SHEET 1 A 7 THR A 42 MSE A 43 0 SHEET 2 A 7 ILE A 46 TYR A 49 -1 O ILE A 46 N MSE A 43 SHEET 3 A 7 PHE A 26 ILE A 32 1 N PHE A 31 O THR A 47 SHEET 4 A 7 LYS A 2 TYR A 7 1 N VAL A 4 O ILE A 29 SHEET 5 A 7 THR A 65 LEU A 68 1 O LEU A 67 N TYR A 7 SHEET 6 A 7 GLU A 91 THR A 94 1 O LEU A 93 N LEU A 68 SHEET 7 A 7 LYS A 112 GLU A 113 -1 O LYS A 112 N THR A 94 SHEET 1 B 7 THR B 42 MSE B 43 0 SHEET 2 B 7 ILE B 46 TYR B 49 -1 O ILE B 46 N MSE B 43 SHEET 3 B 7 PHE B 26 ILE B 32 1 N PHE B 31 O THR B 47 SHEET 4 B 7 LYS B 2 TYR B 7 1 N VAL B 4 O ILE B 29 SHEET 5 B 7 THR B 65 LEU B 68 1 O LEU B 67 N TYR B 7 SHEET 6 B 7 GLU B 91 THR B 94 1 O LEU B 93 N LEU B 68 SHEET 7 B 7 LYS B 112 GLU B 113 -1 O LYS B 112 N THR B 94 SSBOND 1 CYS A 62 CYS B 62 1555 3455 2.09 LINK C ASN A 18 N MSE A 19 1555 1555 1.33 LINK C MSE A 19 N LEU A 20 1555 1555 1.33 LINK C THR A 42 N MSE A 43 1555 1555 1.32 LINK C MSE A 43 N GLN A 44 1555 1555 1.34 LINK C ASN B 18 N AMSE B 19 1555 1555 1.33 LINK C ASN B 18 N BMSE B 19 1555 1555 1.33 LINK C AMSE B 19 N LEU B 20 1555 1555 1.33 LINK C BMSE B 19 N LEU B 20 1555 1555 1.33 LINK C THR B 42 N AMSE B 43 1555 1555 1.32 LINK C THR B 42 N BMSE B 43 1555 1555 1.33 LINK C AMSE B 43 N GLN B 44 1555 1555 1.32 LINK C BMSE B 43 N GLN B 44 1555 1555 1.34 SITE 1 AC1 10 GLY A 10 SER A 11 ALA A 12 SER A 72 SITE 2 AC1 10 GOL A 139 GOL A 142 HOH A 147 HOH A 163 SITE 3 AC1 10 GLY B 10 SER B 11 SITE 1 AC2 11 GLY A 8 ASP A 33 VAL A 70 PRO A 71 SITE 2 AC2 11 SER A 72 ALA A 73 GOL A 139 SO4 A 141 SITE 3 AC2 11 HOH A 182 HOH A 185 HOH A 198 SITE 1 AC3 5 HIS A 39 LYS A 40 LYS A 52 TYR A 53 SITE 2 AC3 5 HOH A 204 SITE 1 AC4 4 GLU A 91 VAL A 92 GLU A 113 VAL A 114 SITE 1 AC5 4 ARG A 50 PRO A 51 LYS A 52 HOH A 181 SITE 1 AC6 9 LYS A 38 HOH A 140 SO4 A 141 GOL A 142 SITE 2 AC6 9 HOH A 173 SER B 72 CL B 141 HOH B 184 SITE 3 AC6 9 HOH B 270 SITE 1 AC7 5 GOL A 139 HOH A 163 VAL B 70 PRO B 71 SITE 2 AC7 5 SER B 72 SITE 1 AC8 5 HIS B 39 LYS B 40 ARG B 50 TYR B 53 SITE 2 AC8 5 HOH B 239 SITE 1 AC9 5 ARG B 50 PRO B 51 LYS B 52 HOH B 238 SITE 2 AC9 5 HOH B 240 CRYST1 108.262 45.379 69.813 90.00 91.54 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009237 0.000000 0.000248 0.00000 SCALE2 0.000000 0.022037 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014329 0.00000