data_3NLS # _entry.id 3NLS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3NLS pdb_00003nls 10.2210/pdb3nls/pdb RCSB RCSB059987 ? ? WWPDB D_1000059987 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-09-07 2 'Structure model' 1 1 2012-12-12 3 'Structure model' 1 2 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Other 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' entity 6 3 'Structure model' pdbx_entity_nonpoly 7 3 'Structure model' struct_ref_seq_dif 8 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_chem_comp.name' 2 3 'Structure model' '_database_2.pdbx_DOI' 3 3 'Structure model' '_database_2.pdbx_database_accession' 4 3 'Structure model' '_entity.pdbx_description' 5 3 'Structure model' '_pdbx_entity_nonpoly.name' 6 3 'Structure model' '_struct_ref_seq_dif.details' 7 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 8 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 9 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 3NLS _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-06-21 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3KDD 'Crystal Structure of HIV-1 Protease (Q7K, L33I, L63I) in Complex with KNI-10265' unspecified PDB 3KDC 'Crystal Structure of HIV-1 Protease (Q7K, L33I, L63I) in Complex with KNI-10074' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gabelli, S.B.' 1 'Kawasaki, Y.' 2 'Freire, E.' 3 'Amzel, L.M.' 4 # _citation.id primary _citation.title 'Crystal Structure of HIV-1 Protease in Complex with KNI-10772' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kawasaki, Y.' 1 ? primary 'Gabelli, S.B.' 2 ? primary 'Amzel, L.M.' 3 ? primary 'Freire, E.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Protease 10804.808 2 3.4.23.16 ? 'residues 501-599' ? 2 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 3 non-polymer syn UREA 60.055 1 ? ? ? ? 4 non-polymer syn ;(4R)-3-[(2R,3S)-3-{[(2,6-dimethylphenoxy)acetyl]amino}-2-hydroxy-4-phenylbutanoyl]-N-[(1S,2R)-2-hydroxy-2,3-dihydro-1H- inden-1-yl]-5,5-dimethyl-1,3-thiazolidine-4-carboxamide ; 631.782 1 ? ? ? ? 5 non-polymer syn 'DIMETHYL SULFOXIDE' 78.133 1 ? ? ? ? 6 water nat water 18.015 336 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Retropepsin, PR' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGIGGFIKVRQYDQIIIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF ; _entity_poly.pdbx_seq_one_letter_code_can ;PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGIGGFIKVRQYDQIIIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 UREA URE 4 ;(4R)-3-[(2R,3S)-3-{[(2,6-dimethylphenoxy)acetyl]amino}-2-hydroxy-4-phenylbutanoyl]-N-[(1S,2R)-2-hydroxy-2,3-dihydro-1H- inden-1-yl]-5,5-dimethyl-1,3-thiazolidine-4-carboxamide ; 016 5 'DIMETHYL SULFOXIDE' DMS 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 GLN n 1 3 ILE n 1 4 THR n 1 5 LEU n 1 6 TRP n 1 7 LYS n 1 8 ARG n 1 9 PRO n 1 10 LEU n 1 11 VAL n 1 12 THR n 1 13 ILE n 1 14 LYS n 1 15 ILE n 1 16 GLY n 1 17 GLY n 1 18 GLN n 1 19 LEU n 1 20 LYS n 1 21 GLU n 1 22 ALA n 1 23 LEU n 1 24 LEU n 1 25 ASP n 1 26 THR n 1 27 GLY n 1 28 ALA n 1 29 ASP n 1 30 ASP n 1 31 THR n 1 32 VAL n 1 33 ILE n 1 34 GLU n 1 35 GLU n 1 36 MET n 1 37 SER n 1 38 LEU n 1 39 PRO n 1 40 GLY n 1 41 ARG n 1 42 TRP n 1 43 LYS n 1 44 PRO n 1 45 LYS n 1 46 MET n 1 47 ILE n 1 48 GLY n 1 49 GLY n 1 50 ILE n 1 51 GLY n 1 52 GLY n 1 53 PHE n 1 54 ILE n 1 55 LYS n 1 56 VAL n 1 57 ARG n 1 58 GLN n 1 59 TYR n 1 60 ASP n 1 61 GLN n 1 62 ILE n 1 63 ILE n 1 64 ILE n 1 65 GLU n 1 66 ILE n 1 67 CYS n 1 68 GLY n 1 69 HIS n 1 70 LYS n 1 71 ALA n 1 72 ILE n 1 73 GLY n 1 74 THR n 1 75 VAL n 1 76 LEU n 1 77 VAL n 1 78 GLY n 1 79 PRO n 1 80 THR n 1 81 PRO n 1 82 VAL n 1 83 ASN n 1 84 ILE n 1 85 ILE n 1 86 GLY n 1 87 ARG n 1 88 ASN n 1 89 LEU n 1 90 LEU n 1 91 THR n 1 92 GLN n 1 93 ILE n 1 94 GLY n 1 95 CYS n 1 96 THR n 1 97 LEU n 1 98 ASN n 1 99 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene pol _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human immunodeficiency virus 1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11686 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 016 peptide-like . ;(4R)-3-[(2R,3S)-3-{[(2,6-dimethylphenoxy)acetyl]amino}-2-hydroxy-4-phenylbutanoyl]-N-[(1S,2R)-2-hydroxy-2,3-dihydro-1H- inden-1-yl]-5,5-dimethyl-1,3-thiazolidine-4-carboxamide ; KNI-10772 'C35 H41 N3 O6 S' 631.782 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DMS non-polymer . 'DIMETHYL SULFOXIDE' ? 'C2 H6 O S' 78.133 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 URE non-polymer . UREA ? 'C H4 N2 O' 60.055 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 1 1 PRO PRO A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 THR 4 4 4 THR THR A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 TRP 6 6 6 TRP TRP A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 MET 36 36 36 MET MET A . n A 1 37 SER 37 37 37 SER SER A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 PRO 39 39 39 PRO PRO A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 ARG 41 41 41 ARG ARG A . n A 1 42 TRP 42 42 42 TRP TRP A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 MET 46 46 46 MET MET A . n A 1 47 ILE 47 47 47 ILE ILE A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 GLN 61 61 61 GLN GLN A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 ILE 63 63 63 ILE ILE A . n A 1 64 ILE 64 64 64 ILE ILE A . n A 1 65 GLU 65 65 65 GLU GLU A . n A 1 66 ILE 66 66 66 ILE ILE A . n A 1 67 CYS 67 67 67 CYS CYS A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 HIS 69 69 69 HIS HIS A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 THR 80 80 80 THR THR A . n A 1 81 PRO 81 81 81 PRO PRO A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 ASN 83 83 83 ASN ASN A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 ARG 87 87 87 ARG ARG A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 GLN 92 92 92 GLN GLN A . n A 1 93 ILE 93 93 93 ILE ILE A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 CYS 95 95 95 CYS CYS A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 PHE 99 99 99 PHE PHE A . n B 1 1 PRO 1 1 1 PRO PRO B . n B 1 2 GLN 2 2 2 GLN GLN B . n B 1 3 ILE 3 3 3 ILE ILE B . n B 1 4 THR 4 4 4 THR THR B . n B 1 5 LEU 5 5 5 LEU LEU B . n B 1 6 TRP 6 6 6 TRP TRP B . n B 1 7 LYS 7 7 7 LYS LYS B . n B 1 8 ARG 8 8 8 ARG ARG B . n B 1 9 PRO 9 9 9 PRO PRO B . n B 1 10 LEU 10 10 10 LEU LEU B . n B 1 11 VAL 11 11 11 VAL VAL B . n B 1 12 THR 12 12 12 THR THR B . n B 1 13 ILE 13 13 13 ILE ILE B . n B 1 14 LYS 14 14 14 LYS LYS B . n B 1 15 ILE 15 15 15 ILE ILE B . n B 1 16 GLY 16 16 16 GLY GLY B . n B 1 17 GLY 17 17 17 GLY GLY B . n B 1 18 GLN 18 18 18 GLN GLN B . n B 1 19 LEU 19 19 19 LEU LEU B . n B 1 20 LYS 20 20 20 LYS LYS B . n B 1 21 GLU 21 21 21 GLU GLU B . n B 1 22 ALA 22 22 22 ALA ALA B . n B 1 23 LEU 23 23 23 LEU LEU B . n B 1 24 LEU 24 24 24 LEU LEU B . n B 1 25 ASP 25 25 25 ASP ASP B . n B 1 26 THR 26 26 26 THR THR B . n B 1 27 GLY 27 27 27 GLY GLY B . n B 1 28 ALA 28 28 28 ALA ALA B . n B 1 29 ASP 29 29 29 ASP ASP B . n B 1 30 ASP 30 30 30 ASP ASP B . n B 1 31 THR 31 31 31 THR THR B . n B 1 32 VAL 32 32 32 VAL VAL B . n B 1 33 ILE 33 33 33 ILE ILE B . n B 1 34 GLU 34 34 34 GLU GLU B . n B 1 35 GLU 35 35 35 GLU GLU B . n B 1 36 MET 36 36 36 MET MET B . n B 1 37 SER 37 37 37 SER SER B . n B 1 38 LEU 38 38 38 LEU LEU B . n B 1 39 PRO 39 39 39 PRO PRO B . n B 1 40 GLY 40 40 40 GLY GLY B . n B 1 41 ARG 41 41 41 ARG ARG B . n B 1 42 TRP 42 42 42 TRP TRP B . n B 1 43 LYS 43 43 43 LYS LYS B . n B 1 44 PRO 44 44 44 PRO PRO B . n B 1 45 LYS 45 45 45 LYS LYS B . n B 1 46 MET 46 46 46 MET MET B . n B 1 47 ILE 47 47 47 ILE ILE B . n B 1 48 GLY 48 48 48 GLY GLY B . n B 1 49 GLY 49 49 49 GLY GLY B . n B 1 50 ILE 50 50 50 ILE ILE B . n B 1 51 GLY 51 51 51 GLY GLY B . n B 1 52 GLY 52 52 52 GLY GLY B . n B 1 53 PHE 53 53 53 PHE PHE B . n B 1 54 ILE 54 54 54 ILE ILE B . n B 1 55 LYS 55 55 55 LYS LYS B . n B 1 56 VAL 56 56 56 VAL VAL B . n B 1 57 ARG 57 57 57 ARG ARG B . n B 1 58 GLN 58 58 58 GLN GLN B . n B 1 59 TYR 59 59 59 TYR TYR B . n B 1 60 ASP 60 60 60 ASP ASP B . n B 1 61 GLN 61 61 61 GLN GLN B . n B 1 62 ILE 62 62 62 ILE ILE B . n B 1 63 ILE 63 63 63 ILE ILE B . n B 1 64 ILE 64 64 64 ILE ILE B . n B 1 65 GLU 65 65 65 GLU GLU B . n B 1 66 ILE 66 66 66 ILE ILE B . n B 1 67 CYS 67 67 67 CYS CYS B . n B 1 68 GLY 68 68 68 GLY GLY B . n B 1 69 HIS 69 69 69 HIS HIS B . n B 1 70 LYS 70 70 70 LYS LYS B . n B 1 71 ALA 71 71 71 ALA ALA B . n B 1 72 ILE 72 72 72 ILE ILE B . n B 1 73 GLY 73 73 73 GLY GLY B . n B 1 74 THR 74 74 74 THR THR B . n B 1 75 VAL 75 75 75 VAL VAL B . n B 1 76 LEU 76 76 76 LEU LEU B . n B 1 77 VAL 77 77 77 VAL VAL B . n B 1 78 GLY 78 78 78 GLY GLY B . n B 1 79 PRO 79 79 79 PRO PRO B . n B 1 80 THR 80 80 80 THR THR B . n B 1 81 PRO 81 81 81 PRO PRO B . n B 1 82 VAL 82 82 82 VAL VAL B . n B 1 83 ASN 83 83 83 ASN ASN B . n B 1 84 ILE 84 84 84 ILE ILE B . n B 1 85 ILE 85 85 85 ILE ILE B . n B 1 86 GLY 86 86 86 GLY GLY B . n B 1 87 ARG 87 87 87 ARG ARG B . n B 1 88 ASN 88 88 88 ASN ASN B . n B 1 89 LEU 89 89 89 LEU LEU B . n B 1 90 LEU 90 90 90 LEU LEU B . n B 1 91 THR 91 91 91 THR THR B . n B 1 92 GLN 92 92 92 GLN GLN B . n B 1 93 ILE 93 93 93 ILE ILE B . n B 1 94 GLY 94 94 94 GLY GLY B . n B 1 95 CYS 95 95 95 CYS CYS B . n B 1 96 THR 96 96 96 THR THR B . n B 1 97 LEU 97 97 97 LEU LEU B . n B 1 98 ASN 98 98 98 ASN ASN B . n B 1 99 PHE 99 99 99 PHE PHE B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL 1 100 1 GOL GOL A . D 3 URE 1 101 3 URE URE A . E 4 016 1 100 100 016 016 B . F 5 DMS 1 101 2 DMS DMS B . G 6 HOH 1 102 4 HOH HOH A . G 6 HOH 2 103 7 HOH HOH A . G 6 HOH 3 104 104 HOH HOH A . G 6 HOH 4 105 8 HOH HOH A . G 6 HOH 5 106 106 HOH HOH A . G 6 HOH 6 107 11 HOH HOH A . G 6 HOH 7 108 108 HOH HOH A . G 6 HOH 8 109 12 HOH HOH A . G 6 HOH 9 110 110 HOH HOH A . G 6 HOH 10 111 111 HOH HOH A . G 6 HOH 11 112 16 HOH HOH A . G 6 HOH 12 113 113 HOH HOH A . G 6 HOH 13 114 114 HOH HOH A . G 6 HOH 14 115 115 HOH HOH A . G 6 HOH 15 116 18 HOH HOH A . G 6 HOH 16 117 20 HOH HOH A . G 6 HOH 17 118 118 HOH HOH A . G 6 HOH 18 119 22 HOH HOH A . G 6 HOH 19 120 23 HOH HOH A . G 6 HOH 20 121 25 HOH HOH A . G 6 HOH 21 122 122 HOH HOH A . G 6 HOH 22 123 123 HOH HOH A . G 6 HOH 23 124 26 HOH HOH A . G 6 HOH 24 125 29 HOH HOH A . G 6 HOH 25 126 126 HOH HOH A . G 6 HOH 26 127 32 HOH HOH A . G 6 HOH 27 128 33 HOH HOH A . G 6 HOH 28 129 129 HOH HOH A . G 6 HOH 29 130 38 HOH HOH A . G 6 HOH 30 131 42 HOH HOH A . G 6 HOH 31 132 132 HOH HOH A . G 6 HOH 32 133 44 HOH HOH A . G 6 HOH 33 134 134 HOH HOH A . G 6 HOH 34 135 135 HOH HOH A . G 6 HOH 35 136 136 HOH HOH A . G 6 HOH 36 137 137 HOH HOH A . G 6 HOH 37 138 46 HOH HOH A . G 6 HOH 38 139 139 HOH HOH A . G 6 HOH 39 140 47 HOH HOH A . G 6 HOH 40 141 141 HOH HOH A . G 6 HOH 41 142 48 HOH HOH A . G 6 HOH 42 143 49 HOH HOH A . G 6 HOH 43 144 144 HOH HOH A . G 6 HOH 44 145 53 HOH HOH A . G 6 HOH 45 146 55 HOH HOH A . G 6 HOH 46 147 147 HOH HOH A . G 6 HOH 47 148 148 HOH HOH A . G 6 HOH 48 149 56 HOH HOH A . G 6 HOH 49 150 150 HOH HOH A . G 6 HOH 50 151 151 HOH HOH A . G 6 HOH 51 152 58 HOH HOH A . G 6 HOH 52 153 60 HOH HOH A . G 6 HOH 53 154 63 HOH HOH A . G 6 HOH 54 155 64 HOH HOH A . G 6 HOH 55 156 156 HOH HOH A . G 6 HOH 56 157 157 HOH HOH A . G 6 HOH 57 158 158 HOH HOH A . G 6 HOH 58 159 159 HOH HOH A . G 6 HOH 59 160 65 HOH HOH A . G 6 HOH 60 161 69 HOH HOH A . G 6 HOH 61 162 162 HOH HOH A . G 6 HOH 62 163 163 HOH HOH A . G 6 HOH 63 164 164 HOH HOH A . G 6 HOH 64 165 165 HOH HOH A . G 6 HOH 65 166 71 HOH HOH A . G 6 HOH 66 167 75 HOH HOH A . G 6 HOH 67 168 76 HOH HOH A . G 6 HOH 68 169 77 HOH HOH A . G 6 HOH 69 170 170 HOH HOH A . G 6 HOH 70 171 171 HOH HOH A . G 6 HOH 71 172 172 HOH HOH A . G 6 HOH 72 173 173 HOH HOH A . G 6 HOH 73 174 174 HOH HOH A . G 6 HOH 74 175 175 HOH HOH A . G 6 HOH 75 176 176 HOH HOH A . G 6 HOH 76 177 177 HOH HOH A . G 6 HOH 77 178 178 HOH HOH A . G 6 HOH 78 179 179 HOH HOH A . G 6 HOH 79 180 180 HOH HOH A . G 6 HOH 80 181 181 HOH HOH A . G 6 HOH 81 182 182 HOH HOH A . G 6 HOH 82 183 183 HOH HOH A . G 6 HOH 83 184 184 HOH HOH A . G 6 HOH 84 185 185 HOH HOH A . G 6 HOH 85 186 186 HOH HOH A . G 6 HOH 86 187 187 HOH HOH A . G 6 HOH 87 188 188 HOH HOH A . G 6 HOH 88 189 189 HOH HOH A . G 6 HOH 89 190 190 HOH HOH A . G 6 HOH 90 191 191 HOH HOH A . G 6 HOH 91 192 192 HOH HOH A . G 6 HOH 92 193 193 HOH HOH A . G 6 HOH 93 194 79 HOH HOH A . G 6 HOH 94 195 195 HOH HOH A . G 6 HOH 95 196 196 HOH HOH A . G 6 HOH 96 197 83 HOH HOH A . G 6 HOH 97 198 198 HOH HOH A . G 6 HOH 98 199 199 HOH HOH A . G 6 HOH 99 200 200 HOH HOH A . G 6 HOH 100 201 201 HOH HOH A . G 6 HOH 101 202 85 HOH HOH A . G 6 HOH 102 203 203 HOH HOH A . G 6 HOH 103 204 204 HOH HOH A . G 6 HOH 104 205 205 HOH HOH A . G 6 HOH 105 206 86 HOH HOH A . G 6 HOH 106 207 207 HOH HOH A . G 6 HOH 107 208 208 HOH HOH A . G 6 HOH 108 209 209 HOH HOH A . G 6 HOH 109 210 210 HOH HOH A . G 6 HOH 110 211 211 HOH HOH A . G 6 HOH 111 212 212 HOH HOH A . G 6 HOH 112 213 89 HOH HOH A . G 6 HOH 113 214 214 HOH HOH A . G 6 HOH 114 215 90 HOH HOH A . G 6 HOH 115 216 91 HOH HOH A . G 6 HOH 116 217 94 HOH HOH A . G 6 HOH 117 218 95 HOH HOH A . G 6 HOH 118 220 220 HOH HOH A . G 6 HOH 119 221 221 HOH HOH A . G 6 HOH 120 222 222 HOH HOH A . G 6 HOH 121 223 223 HOH HOH A . G 6 HOH 122 224 224 HOH HOH A . G 6 HOH 123 225 225 HOH HOH A . G 6 HOH 124 230 230 HOH HOH A . G 6 HOH 125 231 231 HOH HOH A . G 6 HOH 126 232 232 HOH HOH A . G 6 HOH 127 233 233 HOH HOH A . G 6 HOH 128 235 235 HOH HOH A . G 6 HOH 129 247 247 HOH HOH A . G 6 HOH 130 265 265 HOH HOH A . G 6 HOH 131 266 266 HOH HOH A . G 6 HOH 132 267 267 HOH HOH A . G 6 HOH 133 268 268 HOH HOH A . G 6 HOH 134 269 269 HOH HOH A . G 6 HOH 135 270 270 HOH HOH A . G 6 HOH 136 271 271 HOH HOH A . G 6 HOH 137 272 272 HOH HOH A . G 6 HOH 138 273 273 HOH HOH A . G 6 HOH 139 275 275 HOH HOH A . G 6 HOH 140 276 276 HOH HOH A . G 6 HOH 141 277 277 HOH HOH A . G 6 HOH 142 279 279 HOH HOH A . G 6 HOH 143 280 280 HOH HOH A . G 6 HOH 144 282 282 HOH HOH A . G 6 HOH 145 283 283 HOH HOH A . G 6 HOH 146 286 286 HOH HOH A . G 6 HOH 147 288 288 HOH HOH A . G 6 HOH 148 289 289 HOH HOH A . G 6 HOH 149 292 292 HOH HOH A . G 6 HOH 150 294 294 HOH HOH A . G 6 HOH 151 295 295 HOH HOH A . G 6 HOH 152 298 298 HOH HOH A . G 6 HOH 153 305 305 HOH HOH A . G 6 HOH 154 310 310 HOH HOH A . G 6 HOH 155 312 312 HOH HOH A . G 6 HOH 156 314 314 HOH HOH A . G 6 HOH 157 316 316 HOH HOH A . G 6 HOH 158 317 317 HOH HOH A . G 6 HOH 159 321 321 HOH HOH A . G 6 HOH 160 322 322 HOH HOH A . G 6 HOH 161 323 323 HOH HOH A . G 6 HOH 162 326 326 HOH HOH A . G 6 HOH 163 330 330 HOH HOH A . G 6 HOH 164 332 332 HOH HOH A . G 6 HOH 165 333 333 HOH HOH A . G 6 HOH 166 334 334 HOH HOH A . G 6 HOH 167 335 335 HOH HOH A . H 6 HOH 1 102 102 HOH HOH B . H 6 HOH 2 103 103 HOH HOH B . H 6 HOH 3 104 1 HOH HOH B . H 6 HOH 4 105 105 HOH HOH B . H 6 HOH 5 106 2 HOH HOH B . H 6 HOH 6 107 107 HOH HOH B . H 6 HOH 7 108 3 HOH HOH B . H 6 HOH 8 109 109 HOH HOH B . H 6 HOH 9 110 5 HOH HOH B . H 6 HOH 10 111 6 HOH HOH B . H 6 HOH 11 112 112 HOH HOH B . H 6 HOH 12 113 9 HOH HOH B . H 6 HOH 13 114 10 HOH HOH B . H 6 HOH 14 115 13 HOH HOH B . H 6 HOH 15 116 116 HOH HOH B . H 6 HOH 16 117 117 HOH HOH B . H 6 HOH 17 118 14 HOH HOH B . H 6 HOH 18 119 119 HOH HOH B . H 6 HOH 19 120 120 HOH HOH B . H 6 HOH 20 121 121 HOH HOH B . H 6 HOH 21 122 15 HOH HOH B . H 6 HOH 22 123 17 HOH HOH B . H 6 HOH 23 124 124 HOH HOH B . H 6 HOH 24 125 125 HOH HOH B . H 6 HOH 25 126 19 HOH HOH B . H 6 HOH 26 127 127 HOH HOH B . H 6 HOH 27 128 128 HOH HOH B . H 6 HOH 28 129 21 HOH HOH B . H 6 HOH 29 130 130 HOH HOH B . H 6 HOH 30 131 131 HOH HOH B . H 6 HOH 31 132 24 HOH HOH B . H 6 HOH 32 133 133 HOH HOH B . H 6 HOH 33 134 27 HOH HOH B . H 6 HOH 34 135 28 HOH HOH B . H 6 HOH 35 136 30 HOH HOH B . H 6 HOH 36 137 31 HOH HOH B . H 6 HOH 37 138 138 HOH HOH B . H 6 HOH 38 139 34 HOH HOH B . H 6 HOH 39 140 140 HOH HOH B . H 6 HOH 40 141 35 HOH HOH B . H 6 HOH 41 142 142 HOH HOH B . H 6 HOH 42 143 143 HOH HOH B . H 6 HOH 43 144 36 HOH HOH B . H 6 HOH 44 145 145 HOH HOH B . H 6 HOH 45 146 146 HOH HOH B . H 6 HOH 46 147 37 HOH HOH B . H 6 HOH 47 148 39 HOH HOH B . H 6 HOH 48 149 149 HOH HOH B . H 6 HOH 49 150 40 HOH HOH B . H 6 HOH 50 151 41 HOH HOH B . H 6 HOH 51 152 152 HOH HOH B . H 6 HOH 52 153 153 HOH HOH B . H 6 HOH 53 154 154 HOH HOH B . H 6 HOH 54 155 155 HOH HOH B . H 6 HOH 55 156 43 HOH HOH B . H 6 HOH 56 157 45 HOH HOH B . H 6 HOH 57 158 50 HOH HOH B . H 6 HOH 58 159 51 HOH HOH B . H 6 HOH 59 160 160 HOH HOH B . H 6 HOH 60 161 161 HOH HOH B . H 6 HOH 61 162 52 HOH HOH B . H 6 HOH 62 163 54 HOH HOH B . H 6 HOH 63 164 57 HOH HOH B . H 6 HOH 64 165 59 HOH HOH B . H 6 HOH 65 166 166 HOH HOH B . H 6 HOH 66 167 167 HOH HOH B . H 6 HOH 67 168 168 HOH HOH B . H 6 HOH 68 169 169 HOH HOH B . H 6 HOH 69 170 61 HOH HOH B . H 6 HOH 70 171 62 HOH HOH B . H 6 HOH 71 172 66 HOH HOH B . H 6 HOH 72 173 67 HOH HOH B . H 6 HOH 73 174 68 HOH HOH B . H 6 HOH 74 175 70 HOH HOH B . H 6 HOH 75 176 72 HOH HOH B . H 6 HOH 76 177 73 HOH HOH B . H 6 HOH 77 178 74 HOH HOH B . H 6 HOH 78 179 78 HOH HOH B . H 6 HOH 79 180 80 HOH HOH B . H 6 HOH 80 181 81 HOH HOH B . H 6 HOH 81 182 82 HOH HOH B . H 6 HOH 82 183 84 HOH HOH B . H 6 HOH 83 184 87 HOH HOH B . H 6 HOH 84 185 88 HOH HOH B . H 6 HOH 85 186 92 HOH HOH B . H 6 HOH 86 187 93 HOH HOH B . H 6 HOH 87 188 96 HOH HOH B . H 6 HOH 88 189 97 HOH HOH B . H 6 HOH 89 190 98 HOH HOH B . H 6 HOH 90 191 99 HOH HOH B . H 6 HOH 91 192 100 HOH HOH B . H 6 HOH 92 193 101 HOH HOH B . H 6 HOH 93 194 194 HOH HOH B . H 6 HOH 94 197 197 HOH HOH B . H 6 HOH 95 202 202 HOH HOH B . H 6 HOH 96 206 206 HOH HOH B . H 6 HOH 97 213 213 HOH HOH B . H 6 HOH 98 215 215 HOH HOH B . H 6 HOH 99 216 216 HOH HOH B . H 6 HOH 100 217 217 HOH HOH B . H 6 HOH 101 218 218 HOH HOH B . H 6 HOH 102 219 219 HOH HOH B . H 6 HOH 103 226 226 HOH HOH B . H 6 HOH 104 227 227 HOH HOH B . H 6 HOH 105 228 228 HOH HOH B . H 6 HOH 106 229 229 HOH HOH B . H 6 HOH 107 234 234 HOH HOH B . H 6 HOH 108 236 236 HOH HOH B . H 6 HOH 109 237 237 HOH HOH B . H 6 HOH 110 238 238 HOH HOH B . H 6 HOH 111 239 239 HOH HOH B . H 6 HOH 112 240 240 HOH HOH B . H 6 HOH 113 241 241 HOH HOH B . H 6 HOH 114 242 242 HOH HOH B . H 6 HOH 115 243 243 HOH HOH B . H 6 HOH 116 244 244 HOH HOH B . H 6 HOH 117 245 245 HOH HOH B . H 6 HOH 118 246 246 HOH HOH B . H 6 HOH 119 248 248 HOH HOH B . H 6 HOH 120 249 249 HOH HOH B . H 6 HOH 121 250 250 HOH HOH B . H 6 HOH 122 251 251 HOH HOH B . H 6 HOH 123 252 252 HOH HOH B . H 6 HOH 124 253 253 HOH HOH B . H 6 HOH 125 254 254 HOH HOH B . H 6 HOH 126 255 255 HOH HOH B . H 6 HOH 127 256 256 HOH HOH B . H 6 HOH 128 257 257 HOH HOH B . H 6 HOH 129 258 258 HOH HOH B . H 6 HOH 130 259 259 HOH HOH B . H 6 HOH 131 260 260 HOH HOH B . H 6 HOH 132 261 261 HOH HOH B . H 6 HOH 133 262 262 HOH HOH B . H 6 HOH 134 263 263 HOH HOH B . H 6 HOH 135 264 264 HOH HOH B . H 6 HOH 136 274 274 HOH HOH B . H 6 HOH 137 278 278 HOH HOH B . H 6 HOH 138 281 281 HOH HOH B . H 6 HOH 139 284 284 HOH HOH B . H 6 HOH 140 285 285 HOH HOH B . H 6 HOH 141 287 287 HOH HOH B . H 6 HOH 142 290 290 HOH HOH B . H 6 HOH 143 291 291 HOH HOH B . H 6 HOH 144 293 293 HOH HOH B . H 6 HOH 145 296 296 HOH HOH B . H 6 HOH 146 297 297 HOH HOH B . H 6 HOH 147 299 299 HOH HOH B . H 6 HOH 148 300 300 HOH HOH B . H 6 HOH 149 301 301 HOH HOH B . H 6 HOH 150 302 302 HOH HOH B . H 6 HOH 151 303 303 HOH HOH B . H 6 HOH 152 304 304 HOH HOH B . H 6 HOH 153 306 306 HOH HOH B . H 6 HOH 154 307 307 HOH HOH B . H 6 HOH 155 308 308 HOH HOH B . H 6 HOH 156 309 309 HOH HOH B . H 6 HOH 157 311 311 HOH HOH B . H 6 HOH 158 313 313 HOH HOH B . H 6 HOH 159 315 315 HOH HOH B . H 6 HOH 160 318 318 HOH HOH B . H 6 HOH 161 319 319 HOH HOH B . H 6 HOH 162 320 320 HOH HOH B . H 6 HOH 163 324 324 HOH HOH B . H 6 HOH 164 325 325 HOH HOH B . H 6 HOH 165 327 327 HOH HOH B . H 6 HOH 166 328 328 HOH HOH B . H 6 HOH 167 329 329 HOH HOH B . H 6 HOH 168 331 331 HOH HOH B . H 6 HOH 169 336 336 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A ARG 41 ? NH1 ? A ARG 41 NH1 2 1 Y 0 A ARG 41 ? NH2 ? A ARG 41 NH2 # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? # _cell.entry_id 3NLS _cell.length_a 57.896 _cell.length_b 85.389 _cell.length_c 46.691 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3NLS _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3NLS _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.67 _exptl_crystal.density_percent_sol 53.94 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '100 mM Na Acetate, 500 MM NaCl, 10 mM DTT, 3 mM NaN3, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K' # _diffrn.id 1 _diffrn.ambient_temp 180 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU SATURN 944' _diffrn_detector.pdbx_collection_date 2010-02-12 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.542 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU FR-E DW' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.542 # _reflns.entry_id 3NLS _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 1.700 _reflns.number_obs 25899 _reflns.number_all ? _reflns.percent_possible_obs 98.900 _reflns.pdbx_Rmerge_I_obs 0.077 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 11.400 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.200 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.700 1.760 93.800 0.388 ? ? 2.500 ? ? ? ? ? ? 1 1 1.760 1.830 97.100 0.298 ? ? 2.600 ? ? ? ? ? ? 2 1 1.830 1.910 98.600 0.225 ? ? 2.800 ? ? ? ? ? ? 3 1 1.910 2.020 99.900 0.171 ? ? 3.000 ? ? ? ? ? ? 4 1 2.020 2.140 99.900 0.153 ? ? 3.500 ? ? ? ? ? ? 5 1 2.140 2.310 99.900 0.132 ? ? 4.100 ? ? ? ? ? ? 6 1 2.310 2.540 100.000 0.120 ? ? 4.600 ? ? ? ? ? ? 7 1 2.540 2.910 100.000 0.100 ? ? 5.600 ? ? ? ? ? ? 8 1 2.910 3.660 99.800 0.073 ? ? 6.500 ? ? ? ? ? ? 9 1 3.660 50.000 99.500 0.052 ? ? 6.300 ? ? ? ? ? ? 10 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3NLS _refine.ls_number_reflns_obs 22882 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 47.95 _refine.ls_d_res_high 1.70 _refine.ls_percent_reflns_obs 92.09 _refine.ls_R_factor_obs 0.18145 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17948 _refine.ls_R_factor_R_free 0.21813 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1226 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 0.000 _refine.occupancy_max 1.000 _refine.correlation_coeff_Fo_to_Fc 0.957 _refine.correlation_coeff_Fo_to_Fc_free 0.942 _refine.B_iso_mean 19.638 _refine.aniso_B[1][1] 0.13 _refine.aniso_B[2][2] -0.16 _refine.aniso_B[3][3] 0.03 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.114 _refine.pdbx_overall_ESU_R_Free 0.113 _refine.overall_SU_ML 0.072 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 2.143 _refine.overall_SU_R_Cruickshank_DPI 0.1133 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1516 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 59 _refine_hist.number_atoms_solvent 336 _refine_hist.number_atoms_total 1911 _refine_hist.d_res_high 1.70 _refine_hist.d_res_low 47.95 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.012 0.022 ? 1627 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.431 2.026 ? 2211 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.545 5.000 ? 206 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 38.899 24.615 ? 52 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.230 15.000 ? 296 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.439 15.000 ? 9 'X-RAY DIFFRACTION' ? r_chiral_restr 0.099 0.200 ? 263 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 1160 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.192 0.200 ? 763 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.311 0.200 ? 1093 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.137 0.200 ? 210 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.181 0.200 ? 47 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.137 0.200 ? 21 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.182 1.500 ? 1038 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.314 2.000 ? 1625 'X-RAY DIFFRACTION' ? r_scbond_it 2.208 3.000 ? 677 'X-RAY DIFFRACTION' ? r_scangle_it 3.448 4.500 ? 581 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.700 _refine_ls_shell.d_res_low 1.744 _refine_ls_shell.number_reflns_R_work 1428 _refine_ls_shell.R_factor_R_work 0.254 _refine_ls_shell.percent_reflns_obs 77.52 _refine_ls_shell.R_factor_R_free 0.352 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 58 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3NLS _struct.title 'Crystal Structure of HIV-1 Protease in Complex with KNI-10772' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3NLS _struct_keywords.text 'PROTEASE, HYDROLASE-HYDROLASE INHIBITOR complex' _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 6 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code POL_HV1BR _struct_ref.pdbx_db_accession P03367 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PQITLWQRPLVTIKIGGQLKEALLDTGADDTVVEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3NLS A 1 ? 99 ? P03367 1 ? 99 ? 1 99 2 1 3NLS B 1 ? 99 ? P03367 1 ? 99 ? 1 99 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3NLS LYS A 7 ? UNP P03367 GLN 7 'engineered mutation' 7 1 1 3NLS ILE A 33 ? UNP P03367 VAL 33 'engineered mutation' 33 2 1 3NLS ILE A 63 ? UNP P03367 LEU 63 'engineered mutation' 63 3 2 3NLS LYS B 7 ? UNP P03367 GLN 7 'engineered mutation' 7 4 2 3NLS ILE B 33 ? UNP P03367 VAL 33 'engineered mutation' 33 5 2 3NLS ILE B 63 ? UNP P03367 LEU 63 'engineered mutation' 63 6 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3580 ? 1 MORE -25 ? 1 'SSA (A^2)' 9880 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 86 ? THR A 91 ? GLY A 86 THR A 91 1 ? 6 HELX_P HELX_P2 2 GLY B 86 ? ILE B 93 ? GLY B 86 ILE B 93 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 8 ? C ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? parallel C 4 5 ? anti-parallel C 5 6 ? parallel C 6 7 ? anti-parallel C 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 2 ? ILE A 3 ? GLN A 2 ILE A 3 A 2 THR B 96 ? ASN B 98 ? THR B 96 ASN B 98 A 3 THR A 96 ? ASN A 98 ? THR A 96 ASN A 98 A 4 GLN B 2 ? ILE B 3 ? GLN B 2 ILE B 3 B 1 TRP A 42 ? GLY A 49 ? TRP A 42 GLY A 49 B 2 GLY A 52 ? ILE A 66 ? GLY A 52 ILE A 66 B 3 HIS A 69 ? VAL A 77 ? HIS A 69 VAL A 77 B 4 VAL A 32 ? ILE A 33 ? VAL A 32 ILE A 33 B 5 ILE A 84 ? ILE A 85 ? ILE A 84 ILE A 85 B 6 GLN A 18 ? LEU A 24 ? GLN A 18 LEU A 24 B 7 LEU A 10 ? ILE A 15 ? LEU A 10 ILE A 15 B 8 GLY A 52 ? ILE A 66 ? GLY A 52 ILE A 66 C 1 LYS B 43 ? GLY B 49 ? LYS B 43 GLY B 49 C 2 GLY B 52 ? ILE B 66 ? GLY B 52 ILE B 66 C 3 HIS B 69 ? VAL B 77 ? HIS B 69 VAL B 77 C 4 THR B 31 ? ILE B 33 ? THR B 31 ILE B 33 C 5 ILE B 84 ? ILE B 85 ? ILE B 84 ILE B 85 C 6 GLN B 18 ? LEU B 24 ? GLN B 18 LEU B 24 C 7 LEU B 10 ? ILE B 15 ? LEU B 10 ILE B 15 C 8 GLY B 52 ? ILE B 66 ? GLY B 52 ILE B 66 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 3 ? N ILE A 3 O LEU B 97 ? O LEU B 97 A 2 3 O ASN B 98 ? O ASN B 98 N THR A 96 ? N THR A 96 A 3 4 N LEU A 97 ? N LEU A 97 O ILE B 3 ? O ILE B 3 B 1 2 N LYS A 43 ? N LYS A 43 O GLN A 58 ? O GLN A 58 B 2 3 N TYR A 59 ? N TYR A 59 O VAL A 75 ? O VAL A 75 B 3 4 O LEU A 76 ? O LEU A 76 N ILE A 33 ? N ILE A 33 B 4 5 N VAL A 32 ? N VAL A 32 O ILE A 84 ? O ILE A 84 B 5 6 O ILE A 85 ? O ILE A 85 N LEU A 23 ? N LEU A 23 B 6 7 O LYS A 20 ? O LYS A 20 N ILE A 13 ? N ILE A 13 B 7 8 N LYS A 14 ? N LYS A 14 O GLU A 65 ? O GLU A 65 C 1 2 N GLY B 49 ? N GLY B 49 O GLY B 52 ? O GLY B 52 C 2 3 N ILE B 64 ? N ILE B 64 O ALA B 71 ? O ALA B 71 C 3 4 O LEU B 76 ? O LEU B 76 N THR B 31 ? N THR B 31 C 4 5 N VAL B 32 ? N VAL B 32 O ILE B 84 ? O ILE B 84 C 5 6 O ILE B 85 ? O ILE B 85 N LEU B 23 ? N LEU B 23 C 6 7 O LYS B 20 ? O LYS B 20 N ILE B 13 ? N ILE B 13 C 7 8 N LYS B 14 ? N LYS B 14 O GLU B 65 ? O GLU B 65 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B 016 100 ? 24 'BINDING SITE FOR RESIDUE 016 B 100' AC2 Software A GOL 100 ? 7 'BINDING SITE FOR RESIDUE GOL A 100' AC3 Software B DMS 101 ? 3 'BINDING SITE FOR RESIDUE DMS B 101' AC4 Software A URE 101 ? 4 'BINDING SITE FOR RESIDUE URE A 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 24 ASP A 25 ? ASP A 25 . ? 1_555 ? 2 AC1 24 GLY A 27 ? GLY A 27 . ? 1_555 ? 3 AC1 24 ALA A 28 ? ALA A 28 . ? 1_555 ? 4 AC1 24 ASP A 29 ? ASP A 29 . ? 1_555 ? 5 AC1 24 ASP A 30 ? ASP A 30 . ? 1_555 ? 6 AC1 24 VAL A 32 ? VAL A 32 . ? 1_555 ? 7 AC1 24 GLY A 48 ? GLY A 48 . ? 1_555 ? 8 AC1 24 GLY A 49 ? GLY A 49 . ? 1_555 ? 9 AC1 24 ILE A 50 ? ILE A 50 . ? 1_555 ? 10 AC1 24 ILE A 84 ? ILE A 84 . ? 1_555 ? 11 AC1 24 LEU B 23 ? LEU B 23 . ? 1_555 ? 12 AC1 24 ASP B 25 ? ASP B 25 . ? 1_555 ? 13 AC1 24 GLY B 27 ? GLY B 27 . ? 1_555 ? 14 AC1 24 ALA B 28 ? ALA B 28 . ? 1_555 ? 15 AC1 24 ASP B 29 ? ASP B 29 . ? 1_555 ? 16 AC1 24 ASP B 30 ? ASP B 30 . ? 1_555 ? 17 AC1 24 VAL B 32 ? VAL B 32 . ? 1_555 ? 18 AC1 24 ILE B 47 ? ILE B 47 . ? 1_555 ? 19 AC1 24 GLY B 48 ? GLY B 48 . ? 1_555 ? 20 AC1 24 GLY B 49 ? GLY B 49 . ? 1_555 ? 21 AC1 24 ILE B 50 ? ILE B 50 . ? 1_555 ? 22 AC1 24 VAL B 82 ? VAL B 82 . ? 1_555 ? 23 AC1 24 ILE B 84 ? ILE B 84 . ? 1_555 ? 24 AC1 24 HOH H . ? HOH B 291 . ? 1_555 ? 25 AC2 7 GLN A 18 ? GLN A 18 . ? 1_555 ? 26 AC2 7 MET A 36 ? MET A 36 . ? 1_555 ? 27 AC2 7 SER A 37 ? SER A 37 . ? 1_555 ? 28 AC2 7 THR B 12 ? THR B 12 . ? 1_554 ? 29 AC2 7 GLU B 65 ? GLU B 65 . ? 1_554 ? 30 AC2 7 CYS B 67 ? CYS B 67 . ? 1_554 ? 31 AC2 7 GLY B 68 ? GLY B 68 . ? 1_554 ? 32 AC3 3 LYS B 7 ? LYS B 7 . ? 1_555 ? 33 AC3 3 ARG B 8 ? ARG B 8 . ? 1_555 ? 34 AC3 3 HOH H . ? HOH B 150 . ? 1_555 ? 35 AC4 4 LYS A 7 ? LYS A 7 . ? 1_555 ? 36 AC4 4 ARG A 8 ? ARG A 8 . ? 1_555 ? 37 AC4 4 HOH G . ? HOH A 106 . ? 1_555 ? 38 AC4 4 HOH G . ? HOH A 332 . ? 1_555 ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 NH1 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 ARG _pdbx_validate_symm_contact.auth_seq_id_1 41 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 172 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_665 _pdbx_validate_symm_contact.dist 1.99 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CZ A ARG 41 ? ? NH1 A ARG 41 ? ? 1.648 1.326 0.322 0.013 N 2 1 CZ A ARG 41 ? ? NH2 A ARG 41 ? ? 0.959 1.326 -0.367 0.013 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 41 ? ? CZ A ARG 41 ? ? NH1 A ARG 41 ? ? 108.94 120.30 -11.36 0.50 N 2 1 NE A ARG 41 ? ? CZ A ARG 41 ? ? NH2 A ARG 41 ? ? 128.77 120.30 8.47 0.50 N # _pdbx_molecule_features.prd_id PRD_000572 _pdbx_molecule_features.name KNI-10772 _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000572 _pdbx_molecule.asym_id E # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 016 N30 N N N 1 016 O30 O N N 2 016 C31 C N S 3 016 C32 C Y N 4 016 C33 C Y N 5 016 C34 C Y N 6 016 C35 C N R 7 016 C36 C Y N 8 016 C37 C Y N 9 016 C38 C Y N 10 016 C39 C N N 11 016 C40 C N N 12 016 O40 O N N 13 016 C41 C N N 14 016 O41 O N N 15 016 C42 C Y N 16 016 C43 C Y N 17 016 C44 C N N 18 016 C45 C Y N 19 016 C46 C Y N 20 016 C47 C Y N 21 016 C48 C Y N 22 016 C49 C N N 23 016 C50 C N N 24 016 N50 N N N 25 016 O50 O N N 26 016 S50 S N N 27 016 C51 C N N 28 016 C52 C N N 29 016 C53 C N N 30 016 C54 C N R 31 016 C55 C N N 32 016 C60 C N S 33 016 N60 N N N 34 016 O60 O N N 35 016 C61 C N N 36 016 O61 O N N 37 016 C62 C Y N 38 016 C63 C Y N 39 016 C64 C Y N 40 016 C65 C Y N 41 016 C66 C Y N 42 016 C67 C Y N 43 016 C68 C N R 44 016 C69 C N N 45 016 HN30 H N N 46 016 HO30 H N N 47 016 H31 H N N 48 016 H33 H N N 49 016 H34 H N N 50 016 H35 H N N 51 016 H37 H N N 52 016 H38 H N N 53 016 H39 H N N 54 016 H39A H N N 55 016 H41 H N N 56 016 H41A H N N 57 016 H44 H N N 58 016 H44A H N N 59 016 H44B H N N 60 016 H45 H N N 61 016 H46 H N N 62 016 H47 H N N 63 016 H49 H N N 64 016 H49A H N N 65 016 H49B H N N 66 016 H50 H N N 67 016 H50A H N N 68 016 H52 H N N 69 016 H52A H N N 70 016 H52B H N N 71 016 H53 H N N 72 016 H53A H N N 73 016 H53B H N N 74 016 H54 H N N 75 016 H60 H N N 76 016 HN60 H N N 77 016 HO60 H N N 78 016 H61 H N N 79 016 H61A H N N 80 016 H63 H N N 81 016 H64 H N N 82 016 H65 H N N 83 016 H66 H N N 84 016 H67 H N N 85 016 H68 H N N 86 ALA N N N N 87 ALA CA C N S 88 ALA C C N N 89 ALA O O N N 90 ALA CB C N N 91 ALA OXT O N N 92 ALA H H N N 93 ALA H2 H N N 94 ALA HA H N N 95 ALA HB1 H N N 96 ALA HB2 H N N 97 ALA HB3 H N N 98 ALA HXT H N N 99 ARG N N N N 100 ARG CA C N S 101 ARG C C N N 102 ARG O O N N 103 ARG CB C N N 104 ARG CG C N N 105 ARG CD C N N 106 ARG NE N N N 107 ARG CZ C N N 108 ARG NH1 N N N 109 ARG NH2 N N N 110 ARG OXT O N N 111 ARG H H N N 112 ARG H2 H N N 113 ARG HA H N N 114 ARG HB2 H N N 115 ARG HB3 H N N 116 ARG HG2 H N N 117 ARG HG3 H N N 118 ARG HD2 H N N 119 ARG HD3 H N N 120 ARG HE H N N 121 ARG HH11 H N N 122 ARG HH12 H N N 123 ARG HH21 H N N 124 ARG HH22 H N N 125 ARG HXT H N N 126 ASN N N N N 127 ASN CA C N S 128 ASN C C N N 129 ASN O O N N 130 ASN CB C N N 131 ASN CG C N N 132 ASN OD1 O N N 133 ASN ND2 N N N 134 ASN OXT O N N 135 ASN H H N N 136 ASN H2 H N N 137 ASN HA H N N 138 ASN HB2 H N N 139 ASN HB3 H N N 140 ASN HD21 H N N 141 ASN HD22 H N N 142 ASN HXT H N N 143 ASP N N N N 144 ASP CA C N S 145 ASP C C N N 146 ASP O O N N 147 ASP CB C N N 148 ASP CG C N N 149 ASP OD1 O N N 150 ASP OD2 O N N 151 ASP OXT O N N 152 ASP H H N N 153 ASP H2 H N N 154 ASP HA H N N 155 ASP HB2 H N N 156 ASP HB3 H N N 157 ASP HD2 H N N 158 ASP HXT H N N 159 CYS N N N N 160 CYS CA C N R 161 CYS C C N N 162 CYS O O N N 163 CYS CB C N N 164 CYS SG S N N 165 CYS OXT O N N 166 CYS H H N N 167 CYS H2 H N N 168 CYS HA H N N 169 CYS HB2 H N N 170 CYS HB3 H N N 171 CYS HG H N N 172 CYS HXT H N N 173 DMS S S N N 174 DMS O O N N 175 DMS C1 C N N 176 DMS C2 C N N 177 DMS H11 H N N 178 DMS H12 H N N 179 DMS H13 H N N 180 DMS H21 H N N 181 DMS H22 H N N 182 DMS H23 H N N 183 GLN N N N N 184 GLN CA C N S 185 GLN C C N N 186 GLN O O N N 187 GLN CB C N N 188 GLN CG C N N 189 GLN CD C N N 190 GLN OE1 O N N 191 GLN NE2 N N N 192 GLN OXT O N N 193 GLN H H N N 194 GLN H2 H N N 195 GLN HA H N N 196 GLN HB2 H N N 197 GLN HB3 H N N 198 GLN HG2 H N N 199 GLN HG3 H N N 200 GLN HE21 H N N 201 GLN HE22 H N N 202 GLN HXT H N N 203 GLU N N N N 204 GLU CA C N S 205 GLU C C N N 206 GLU O O N N 207 GLU CB C N N 208 GLU CG C N N 209 GLU CD C N N 210 GLU OE1 O N N 211 GLU OE2 O N N 212 GLU OXT O N N 213 GLU H H N N 214 GLU H2 H N N 215 GLU HA H N N 216 GLU HB2 H N N 217 GLU HB3 H N N 218 GLU HG2 H N N 219 GLU HG3 H N N 220 GLU HE2 H N N 221 GLU HXT H N N 222 GLY N N N N 223 GLY CA C N N 224 GLY C C N N 225 GLY O O N N 226 GLY OXT O N N 227 GLY H H N N 228 GLY H2 H N N 229 GLY HA2 H N N 230 GLY HA3 H N N 231 GLY HXT H N N 232 GOL C1 C N N 233 GOL O1 O N N 234 GOL C2 C N N 235 GOL O2 O N N 236 GOL C3 C N N 237 GOL O3 O N N 238 GOL H11 H N N 239 GOL H12 H N N 240 GOL HO1 H N N 241 GOL H2 H N N 242 GOL HO2 H N N 243 GOL H31 H N N 244 GOL H32 H N N 245 GOL HO3 H N N 246 HIS N N N N 247 HIS CA C N S 248 HIS C C N N 249 HIS O O N N 250 HIS CB C N N 251 HIS CG C Y N 252 HIS ND1 N Y N 253 HIS CD2 C Y N 254 HIS CE1 C Y N 255 HIS NE2 N Y N 256 HIS OXT O N N 257 HIS H H N N 258 HIS H2 H N N 259 HIS HA H N N 260 HIS HB2 H N N 261 HIS HB3 H N N 262 HIS HD1 H N N 263 HIS HD2 H N N 264 HIS HE1 H N N 265 HIS HE2 H N N 266 HIS HXT H N N 267 HOH O O N N 268 HOH H1 H N N 269 HOH H2 H N N 270 ILE N N N N 271 ILE CA C N S 272 ILE C C N N 273 ILE O O N N 274 ILE CB C N S 275 ILE CG1 C N N 276 ILE CG2 C N N 277 ILE CD1 C N N 278 ILE OXT O N N 279 ILE H H N N 280 ILE H2 H N N 281 ILE HA H N N 282 ILE HB H N N 283 ILE HG12 H N N 284 ILE HG13 H N N 285 ILE HG21 H N N 286 ILE HG22 H N N 287 ILE HG23 H N N 288 ILE HD11 H N N 289 ILE HD12 H N N 290 ILE HD13 H N N 291 ILE HXT H N N 292 LEU N N N N 293 LEU CA C N S 294 LEU C C N N 295 LEU O O N N 296 LEU CB C N N 297 LEU CG C N N 298 LEU CD1 C N N 299 LEU CD2 C N N 300 LEU OXT O N N 301 LEU H H N N 302 LEU H2 H N N 303 LEU HA H N N 304 LEU HB2 H N N 305 LEU HB3 H N N 306 LEU HG H N N 307 LEU HD11 H N N 308 LEU HD12 H N N 309 LEU HD13 H N N 310 LEU HD21 H N N 311 LEU HD22 H N N 312 LEU HD23 H N N 313 LEU HXT H N N 314 LYS N N N N 315 LYS CA C N S 316 LYS C C N N 317 LYS O O N N 318 LYS CB C N N 319 LYS CG C N N 320 LYS CD C N N 321 LYS CE C N N 322 LYS NZ N N N 323 LYS OXT O N N 324 LYS H H N N 325 LYS H2 H N N 326 LYS HA H N N 327 LYS HB2 H N N 328 LYS HB3 H N N 329 LYS HG2 H N N 330 LYS HG3 H N N 331 LYS HD2 H N N 332 LYS HD3 H N N 333 LYS HE2 H N N 334 LYS HE3 H N N 335 LYS HZ1 H N N 336 LYS HZ2 H N N 337 LYS HZ3 H N N 338 LYS HXT H N N 339 MET N N N N 340 MET CA C N S 341 MET C C N N 342 MET O O N N 343 MET CB C N N 344 MET CG C N N 345 MET SD S N N 346 MET CE C N N 347 MET OXT O N N 348 MET H H N N 349 MET H2 H N N 350 MET HA H N N 351 MET HB2 H N N 352 MET HB3 H N N 353 MET HG2 H N N 354 MET HG3 H N N 355 MET HE1 H N N 356 MET HE2 H N N 357 MET HE3 H N N 358 MET HXT H N N 359 PHE N N N N 360 PHE CA C N S 361 PHE C C N N 362 PHE O O N N 363 PHE CB C N N 364 PHE CG C Y N 365 PHE CD1 C Y N 366 PHE CD2 C Y N 367 PHE CE1 C Y N 368 PHE CE2 C Y N 369 PHE CZ C Y N 370 PHE OXT O N N 371 PHE H H N N 372 PHE H2 H N N 373 PHE HA H N N 374 PHE HB2 H N N 375 PHE HB3 H N N 376 PHE HD1 H N N 377 PHE HD2 H N N 378 PHE HE1 H N N 379 PHE HE2 H N N 380 PHE HZ H N N 381 PHE HXT H N N 382 PRO N N N N 383 PRO CA C N S 384 PRO C C N N 385 PRO O O N N 386 PRO CB C N N 387 PRO CG C N N 388 PRO CD C N N 389 PRO OXT O N N 390 PRO H H N N 391 PRO HA H N N 392 PRO HB2 H N N 393 PRO HB3 H N N 394 PRO HG2 H N N 395 PRO HG3 H N N 396 PRO HD2 H N N 397 PRO HD3 H N N 398 PRO HXT H N N 399 SER N N N N 400 SER CA C N S 401 SER C C N N 402 SER O O N N 403 SER CB C N N 404 SER OG O N N 405 SER OXT O N N 406 SER H H N N 407 SER H2 H N N 408 SER HA H N N 409 SER HB2 H N N 410 SER HB3 H N N 411 SER HG H N N 412 SER HXT H N N 413 THR N N N N 414 THR CA C N S 415 THR C C N N 416 THR O O N N 417 THR CB C N R 418 THR OG1 O N N 419 THR CG2 C N N 420 THR OXT O N N 421 THR H H N N 422 THR H2 H N N 423 THR HA H N N 424 THR HB H N N 425 THR HG1 H N N 426 THR HG21 H N N 427 THR HG22 H N N 428 THR HG23 H N N 429 THR HXT H N N 430 TRP N N N N 431 TRP CA C N S 432 TRP C C N N 433 TRP O O N N 434 TRP CB C N N 435 TRP CG C Y N 436 TRP CD1 C Y N 437 TRP CD2 C Y N 438 TRP NE1 N Y N 439 TRP CE2 C Y N 440 TRP CE3 C Y N 441 TRP CZ2 C Y N 442 TRP CZ3 C Y N 443 TRP CH2 C Y N 444 TRP OXT O N N 445 TRP H H N N 446 TRP H2 H N N 447 TRP HA H N N 448 TRP HB2 H N N 449 TRP HB3 H N N 450 TRP HD1 H N N 451 TRP HE1 H N N 452 TRP HE3 H N N 453 TRP HZ2 H N N 454 TRP HZ3 H N N 455 TRP HH2 H N N 456 TRP HXT H N N 457 TYR N N N N 458 TYR CA C N S 459 TYR C C N N 460 TYR O O N N 461 TYR CB C N N 462 TYR CG C Y N 463 TYR CD1 C Y N 464 TYR CD2 C Y N 465 TYR CE1 C Y N 466 TYR CE2 C Y N 467 TYR CZ C Y N 468 TYR OH O N N 469 TYR OXT O N N 470 TYR H H N N 471 TYR H2 H N N 472 TYR HA H N N 473 TYR HB2 H N N 474 TYR HB3 H N N 475 TYR HD1 H N N 476 TYR HD2 H N N 477 TYR HE1 H N N 478 TYR HE2 H N N 479 TYR HH H N N 480 TYR HXT H N N 481 URE C C N N 482 URE O O N N 483 URE N1 N N N 484 URE N2 N N N 485 URE HN11 H N N 486 URE HN12 H N N 487 URE HN21 H N N 488 URE HN22 H N N 489 VAL N N N N 490 VAL CA C N S 491 VAL C C N N 492 VAL O O N N 493 VAL CB C N N 494 VAL CG1 C N N 495 VAL CG2 C N N 496 VAL OXT O N N 497 VAL H H N N 498 VAL H2 H N N 499 VAL HA H N N 500 VAL HB H N N 501 VAL HG11 H N N 502 VAL HG12 H N N 503 VAL HG13 H N N 504 VAL HG21 H N N 505 VAL HG22 H N N 506 VAL HG23 H N N 507 VAL HXT H N N 508 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 016 C31 N30 sing N N 1 016 N30 C55 sing N N 2 016 N30 HN30 sing N N 3 016 C35 O30 sing N N 4 016 O30 HO30 sing N N 5 016 C32 C31 sing N N 6 016 C31 C35 sing N N 7 016 C31 H31 sing N N 8 016 C33 C32 doub Y N 9 016 C36 C32 sing Y N 10 016 C34 C33 sing Y N 11 016 C33 H33 sing N N 12 016 C38 C34 doub Y N 13 016 C34 H34 sing N N 14 016 C39 C35 sing N N 15 016 C35 H35 sing N N 16 016 C37 C36 doub Y N 17 016 C36 C39 sing N N 18 016 C38 C37 sing Y N 19 016 C37 H37 sing N N 20 016 C38 H38 sing N N 21 016 C39 H39 sing N N 22 016 C39 H39A sing N N 23 016 N60 C40 sing N N 24 016 O40 C40 doub N N 25 016 C40 C41 sing N N 26 016 C41 O41 sing N N 27 016 C41 H41 sing N N 28 016 C41 H41A sing N N 29 016 O41 C42 sing N N 30 016 C43 C42 doub Y N 31 016 C42 C48 sing Y N 32 016 C44 C43 sing N N 33 016 C43 C45 sing Y N 34 016 C44 H44 sing N N 35 016 C44 H44A sing N N 36 016 C44 H44B sing N N 37 016 C45 C46 doub Y N 38 016 C45 H45 sing N N 39 016 C46 C47 sing Y N 40 016 C46 H46 sing N N 41 016 C48 C47 doub Y N 42 016 C47 H47 sing N N 43 016 C48 C49 sing N N 44 016 C49 H49 sing N N 45 016 C49 H49A sing N N 46 016 C49 H49B sing N N 47 016 N50 C50 sing N N 48 016 C50 S50 sing N N 49 016 C50 H50 sing N N 50 016 C50 H50A sing N N 51 016 C69 N50 sing N N 52 016 N50 C54 sing N N 53 016 O50 C55 doub N N 54 016 C51 S50 sing N N 55 016 C54 C51 sing N N 56 016 C52 C51 sing N N 57 016 C51 C53 sing N N 58 016 C52 H52 sing N N 59 016 C52 H52A sing N N 60 016 C52 H52B sing N N 61 016 C53 H53 sing N N 62 016 C53 H53A sing N N 63 016 C53 H53B sing N N 64 016 C55 C54 sing N N 65 016 C54 H54 sing N N 66 016 C61 C60 sing N N 67 016 C60 N60 sing N N 68 016 C60 C68 sing N N 69 016 C60 H60 sing N N 70 016 N60 HN60 sing N N 71 016 C68 O60 sing N N 72 016 O60 HO60 sing N N 73 016 C62 C61 sing N N 74 016 C61 H61 sing N N 75 016 C61 H61A sing N N 76 016 O61 C69 doub N N 77 016 C67 C62 doub Y N 78 016 C63 C62 sing Y N 79 016 C64 C63 doub Y N 80 016 C63 H63 sing N N 81 016 C65 C64 sing Y N 82 016 C64 H64 sing N N 83 016 C65 C66 doub Y N 84 016 C65 H65 sing N N 85 016 C66 C67 sing Y N 86 016 C66 H66 sing N N 87 016 C67 H67 sing N N 88 016 C68 C69 sing N N 89 016 C68 H68 sing N N 90 ALA N CA sing N N 91 ALA N H sing N N 92 ALA N H2 sing N N 93 ALA CA C sing N N 94 ALA CA CB sing N N 95 ALA CA HA sing N N 96 ALA C O doub N N 97 ALA C OXT sing N N 98 ALA CB HB1 sing N N 99 ALA CB HB2 sing N N 100 ALA CB HB3 sing N N 101 ALA OXT HXT sing N N 102 ARG N CA sing N N 103 ARG N H sing N N 104 ARG N H2 sing N N 105 ARG CA C sing N N 106 ARG CA CB sing N N 107 ARG CA HA sing N N 108 ARG C O doub N N 109 ARG C OXT sing N N 110 ARG CB CG sing N N 111 ARG CB HB2 sing N N 112 ARG CB HB3 sing N N 113 ARG CG CD sing N N 114 ARG CG HG2 sing N N 115 ARG CG HG3 sing N N 116 ARG CD NE sing N N 117 ARG CD HD2 sing N N 118 ARG CD HD3 sing N N 119 ARG NE CZ sing N N 120 ARG NE HE sing N N 121 ARG CZ NH1 sing N N 122 ARG CZ NH2 doub N N 123 ARG NH1 HH11 sing N N 124 ARG NH1 HH12 sing N N 125 ARG NH2 HH21 sing N N 126 ARG NH2 HH22 sing N N 127 ARG OXT HXT sing N N 128 ASN N CA sing N N 129 ASN N H sing N N 130 ASN N H2 sing N N 131 ASN CA C sing N N 132 ASN CA CB sing N N 133 ASN CA HA sing N N 134 ASN C O doub N N 135 ASN C OXT sing N N 136 ASN CB CG sing N N 137 ASN CB HB2 sing N N 138 ASN CB HB3 sing N N 139 ASN CG OD1 doub N N 140 ASN CG ND2 sing N N 141 ASN ND2 HD21 sing N N 142 ASN ND2 HD22 sing N N 143 ASN OXT HXT sing N N 144 ASP N CA sing N N 145 ASP N H sing N N 146 ASP N H2 sing N N 147 ASP CA C sing N N 148 ASP CA CB sing N N 149 ASP CA HA sing N N 150 ASP C O doub N N 151 ASP C OXT sing N N 152 ASP CB CG sing N N 153 ASP CB HB2 sing N N 154 ASP CB HB3 sing N N 155 ASP CG OD1 doub N N 156 ASP CG OD2 sing N N 157 ASP OD2 HD2 sing N N 158 ASP OXT HXT sing N N 159 CYS N CA sing N N 160 CYS N H sing N N 161 CYS N H2 sing N N 162 CYS CA C sing N N 163 CYS CA CB sing N N 164 CYS CA HA sing N N 165 CYS C O doub N N 166 CYS C OXT sing N N 167 CYS CB SG sing N N 168 CYS CB HB2 sing N N 169 CYS CB HB3 sing N N 170 CYS SG HG sing N N 171 CYS OXT HXT sing N N 172 DMS S O doub N N 173 DMS S C1 sing N N 174 DMS S C2 sing N N 175 DMS C1 H11 sing N N 176 DMS C1 H12 sing N N 177 DMS C1 H13 sing N N 178 DMS C2 H21 sing N N 179 DMS C2 H22 sing N N 180 DMS C2 H23 sing N N 181 GLN N CA sing N N 182 GLN N H sing N N 183 GLN N H2 sing N N 184 GLN CA C sing N N 185 GLN CA CB sing N N 186 GLN CA HA sing N N 187 GLN C O doub N N 188 GLN C OXT sing N N 189 GLN CB CG sing N N 190 GLN CB HB2 sing N N 191 GLN CB HB3 sing N N 192 GLN CG CD sing N N 193 GLN CG HG2 sing N N 194 GLN CG HG3 sing N N 195 GLN CD OE1 doub N N 196 GLN CD NE2 sing N N 197 GLN NE2 HE21 sing N N 198 GLN NE2 HE22 sing N N 199 GLN OXT HXT sing N N 200 GLU N CA sing N N 201 GLU N H sing N N 202 GLU N H2 sing N N 203 GLU CA C sing N N 204 GLU CA CB sing N N 205 GLU CA HA sing N N 206 GLU C O doub N N 207 GLU C OXT sing N N 208 GLU CB CG sing N N 209 GLU CB HB2 sing N N 210 GLU CB HB3 sing N N 211 GLU CG CD sing N N 212 GLU CG HG2 sing N N 213 GLU CG HG3 sing N N 214 GLU CD OE1 doub N N 215 GLU CD OE2 sing N N 216 GLU OE2 HE2 sing N N 217 GLU OXT HXT sing N N 218 GLY N CA sing N N 219 GLY N H sing N N 220 GLY N H2 sing N N 221 GLY CA C sing N N 222 GLY CA HA2 sing N N 223 GLY CA HA3 sing N N 224 GLY C O doub N N 225 GLY C OXT sing N N 226 GLY OXT HXT sing N N 227 GOL C1 O1 sing N N 228 GOL C1 C2 sing N N 229 GOL C1 H11 sing N N 230 GOL C1 H12 sing N N 231 GOL O1 HO1 sing N N 232 GOL C2 O2 sing N N 233 GOL C2 C3 sing N N 234 GOL C2 H2 sing N N 235 GOL O2 HO2 sing N N 236 GOL C3 O3 sing N N 237 GOL C3 H31 sing N N 238 GOL C3 H32 sing N N 239 GOL O3 HO3 sing N N 240 HIS N CA sing N N 241 HIS N H sing N N 242 HIS N H2 sing N N 243 HIS CA C sing N N 244 HIS CA CB sing N N 245 HIS CA HA sing N N 246 HIS C O doub N N 247 HIS C OXT sing N N 248 HIS CB CG sing N N 249 HIS CB HB2 sing N N 250 HIS CB HB3 sing N N 251 HIS CG ND1 sing Y N 252 HIS CG CD2 doub Y N 253 HIS ND1 CE1 doub Y N 254 HIS ND1 HD1 sing N N 255 HIS CD2 NE2 sing Y N 256 HIS CD2 HD2 sing N N 257 HIS CE1 NE2 sing Y N 258 HIS CE1 HE1 sing N N 259 HIS NE2 HE2 sing N N 260 HIS OXT HXT sing N N 261 HOH O H1 sing N N 262 HOH O H2 sing N N 263 ILE N CA sing N N 264 ILE N H sing N N 265 ILE N H2 sing N N 266 ILE CA C sing N N 267 ILE CA CB sing N N 268 ILE CA HA sing N N 269 ILE C O doub N N 270 ILE C OXT sing N N 271 ILE CB CG1 sing N N 272 ILE CB CG2 sing N N 273 ILE CB HB sing N N 274 ILE CG1 CD1 sing N N 275 ILE CG1 HG12 sing N N 276 ILE CG1 HG13 sing N N 277 ILE CG2 HG21 sing N N 278 ILE CG2 HG22 sing N N 279 ILE CG2 HG23 sing N N 280 ILE CD1 HD11 sing N N 281 ILE CD1 HD12 sing N N 282 ILE CD1 HD13 sing N N 283 ILE OXT HXT sing N N 284 LEU N CA sing N N 285 LEU N H sing N N 286 LEU N H2 sing N N 287 LEU CA C sing N N 288 LEU CA CB sing N N 289 LEU CA HA sing N N 290 LEU C O doub N N 291 LEU C OXT sing N N 292 LEU CB CG sing N N 293 LEU CB HB2 sing N N 294 LEU CB HB3 sing N N 295 LEU CG CD1 sing N N 296 LEU CG CD2 sing N N 297 LEU CG HG sing N N 298 LEU CD1 HD11 sing N N 299 LEU CD1 HD12 sing N N 300 LEU CD1 HD13 sing N N 301 LEU CD2 HD21 sing N N 302 LEU CD2 HD22 sing N N 303 LEU CD2 HD23 sing N N 304 LEU OXT HXT sing N N 305 LYS N CA sing N N 306 LYS N H sing N N 307 LYS N H2 sing N N 308 LYS CA C sing N N 309 LYS CA CB sing N N 310 LYS CA HA sing N N 311 LYS C O doub N N 312 LYS C OXT sing N N 313 LYS CB CG sing N N 314 LYS CB HB2 sing N N 315 LYS CB HB3 sing N N 316 LYS CG CD sing N N 317 LYS CG HG2 sing N N 318 LYS CG HG3 sing N N 319 LYS CD CE sing N N 320 LYS CD HD2 sing N N 321 LYS CD HD3 sing N N 322 LYS CE NZ sing N N 323 LYS CE HE2 sing N N 324 LYS CE HE3 sing N N 325 LYS NZ HZ1 sing N N 326 LYS NZ HZ2 sing N N 327 LYS NZ HZ3 sing N N 328 LYS OXT HXT sing N N 329 MET N CA sing N N 330 MET N H sing N N 331 MET N H2 sing N N 332 MET CA C sing N N 333 MET CA CB sing N N 334 MET CA HA sing N N 335 MET C O doub N N 336 MET C OXT sing N N 337 MET CB CG sing N N 338 MET CB HB2 sing N N 339 MET CB HB3 sing N N 340 MET CG SD sing N N 341 MET CG HG2 sing N N 342 MET CG HG3 sing N N 343 MET SD CE sing N N 344 MET CE HE1 sing N N 345 MET CE HE2 sing N N 346 MET CE HE3 sing N N 347 MET OXT HXT sing N N 348 PHE N CA sing N N 349 PHE N H sing N N 350 PHE N H2 sing N N 351 PHE CA C sing N N 352 PHE CA CB sing N N 353 PHE CA HA sing N N 354 PHE C O doub N N 355 PHE C OXT sing N N 356 PHE CB CG sing N N 357 PHE CB HB2 sing N N 358 PHE CB HB3 sing N N 359 PHE CG CD1 doub Y N 360 PHE CG CD2 sing Y N 361 PHE CD1 CE1 sing Y N 362 PHE CD1 HD1 sing N N 363 PHE CD2 CE2 doub Y N 364 PHE CD2 HD2 sing N N 365 PHE CE1 CZ doub Y N 366 PHE CE1 HE1 sing N N 367 PHE CE2 CZ sing Y N 368 PHE CE2 HE2 sing N N 369 PHE CZ HZ sing N N 370 PHE OXT HXT sing N N 371 PRO N CA sing N N 372 PRO N CD sing N N 373 PRO N H sing N N 374 PRO CA C sing N N 375 PRO CA CB sing N N 376 PRO CA HA sing N N 377 PRO C O doub N N 378 PRO C OXT sing N N 379 PRO CB CG sing N N 380 PRO CB HB2 sing N N 381 PRO CB HB3 sing N N 382 PRO CG CD sing N N 383 PRO CG HG2 sing N N 384 PRO CG HG3 sing N N 385 PRO CD HD2 sing N N 386 PRO CD HD3 sing N N 387 PRO OXT HXT sing N N 388 SER N CA sing N N 389 SER N H sing N N 390 SER N H2 sing N N 391 SER CA C sing N N 392 SER CA CB sing N N 393 SER CA HA sing N N 394 SER C O doub N N 395 SER C OXT sing N N 396 SER CB OG sing N N 397 SER CB HB2 sing N N 398 SER CB HB3 sing N N 399 SER OG HG sing N N 400 SER OXT HXT sing N N 401 THR N CA sing N N 402 THR N H sing N N 403 THR N H2 sing N N 404 THR CA C sing N N 405 THR CA CB sing N N 406 THR CA HA sing N N 407 THR C O doub N N 408 THR C OXT sing N N 409 THR CB OG1 sing N N 410 THR CB CG2 sing N N 411 THR CB HB sing N N 412 THR OG1 HG1 sing N N 413 THR CG2 HG21 sing N N 414 THR CG2 HG22 sing N N 415 THR CG2 HG23 sing N N 416 THR OXT HXT sing N N 417 TRP N CA sing N N 418 TRP N H sing N N 419 TRP N H2 sing N N 420 TRP CA C sing N N 421 TRP CA CB sing N N 422 TRP CA HA sing N N 423 TRP C O doub N N 424 TRP C OXT sing N N 425 TRP CB CG sing N N 426 TRP CB HB2 sing N N 427 TRP CB HB3 sing N N 428 TRP CG CD1 doub Y N 429 TRP CG CD2 sing Y N 430 TRP CD1 NE1 sing Y N 431 TRP CD1 HD1 sing N N 432 TRP CD2 CE2 doub Y N 433 TRP CD2 CE3 sing Y N 434 TRP NE1 CE2 sing Y N 435 TRP NE1 HE1 sing N N 436 TRP CE2 CZ2 sing Y N 437 TRP CE3 CZ3 doub Y N 438 TRP CE3 HE3 sing N N 439 TRP CZ2 CH2 doub Y N 440 TRP CZ2 HZ2 sing N N 441 TRP CZ3 CH2 sing Y N 442 TRP CZ3 HZ3 sing N N 443 TRP CH2 HH2 sing N N 444 TRP OXT HXT sing N N 445 TYR N CA sing N N 446 TYR N H sing N N 447 TYR N H2 sing N N 448 TYR CA C sing N N 449 TYR CA CB sing N N 450 TYR CA HA sing N N 451 TYR C O doub N N 452 TYR C OXT sing N N 453 TYR CB CG sing N N 454 TYR CB HB2 sing N N 455 TYR CB HB3 sing N N 456 TYR CG CD1 doub Y N 457 TYR CG CD2 sing Y N 458 TYR CD1 CE1 sing Y N 459 TYR CD1 HD1 sing N N 460 TYR CD2 CE2 doub Y N 461 TYR CD2 HD2 sing N N 462 TYR CE1 CZ doub Y N 463 TYR CE1 HE1 sing N N 464 TYR CE2 CZ sing Y N 465 TYR CE2 HE2 sing N N 466 TYR CZ OH sing N N 467 TYR OH HH sing N N 468 TYR OXT HXT sing N N 469 URE C O doub N N 470 URE C N1 sing N N 471 URE C N2 sing N N 472 URE N1 HN11 sing N N 473 URE N1 HN12 sing N N 474 URE N2 HN21 sing N N 475 URE N2 HN22 sing N N 476 VAL N CA sing N N 477 VAL N H sing N N 478 VAL N H2 sing N N 479 VAL CA C sing N N 480 VAL CA CB sing N N 481 VAL CA HA sing N N 482 VAL C O doub N N 483 VAL C OXT sing N N 484 VAL CB CG1 sing N N 485 VAL CB CG2 sing N N 486 VAL CB HB sing N N 487 VAL CG1 HG11 sing N N 488 VAL CG1 HG12 sing N N 489 VAL CG1 HG13 sing N N 490 VAL CG2 HG21 sing N N 491 VAL CG2 HG22 sing N N 492 VAL CG2 HG23 sing N N 493 VAL OXT HXT sing N N 494 # _atom_sites.entry_id 3NLS _atom_sites.fract_transf_matrix[1][1] 0.017272 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011711 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021417 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_