HEADER OXIDOREDUCTASE 02-JUL-10 3NSY TITLE THE MULTI-COPPER OXIDASE CUEO WITH SIX MET TO SER MUTATIONS (M358S, TITLE 2 M361S,M362S,M364S,M366S,M368S) COMPND MOL_ID: 1; COMPND 2 MOLECULE: BLUE COPPER OXIDASE CUEO; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: B0123, CUEO, CUEO (YACK), JW0119, YACK; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PASK-IBA3 KEYWDS MULTICOPPER OXIDAS, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR S.A.ROBERTS,W.R.MONTFORT,S.K.SINGH REVDAT 4 06-SEP-23 3NSY 1 REMARK SEQADV LINK REVDAT 3 29-NOV-17 3NSY 1 JRNL REVDAT 2 08-NOV-17 3NSY 1 REMARK REVDAT 1 17-AUG-11 3NSY 0 JRNL AUTH S.K.SINGH,S.A.ROBERTS,S.F.MCDEVITT,A.WEICHSEL,G.F.WILDNER, JRNL AUTH 2 G.B.GRASS,C.RENSING,W.R.MONTFORT JRNL TITL CRYSTAL STRUCTURES OF MULTICOPPER OXIDASE CUEO BOUND TO JRNL TITL 2 COPPER(I) AND SILVER(I): FUNCTIONAL ROLE OF A JRNL TITL 3 METHIONINE-RICH SEQUENCE. JRNL REF J. BIOL. CHEM. V. 286 37849 2011 JRNL REFN ESSN 1083-351X JRNL PMID 21903583 JRNL DOI 10.1074/JBC.M111.293589 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 25907 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1402 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1863 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.76 REMARK 3 BIN R VALUE (WORKING SET) : 0.1940 REMARK 3 BIN FREE R VALUE SET COUNT : 105 REMARK 3 BIN FREE R VALUE : 0.2500 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3569 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 7 REMARK 3 SOLVENT ATOMS : 305 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 38.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.57000 REMARK 3 B22 (A**2) : -0.48000 REMARK 3 B33 (A**2) : 0.82000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.56000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.189 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.119 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.383 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3675 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2467 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4995 ; 1.315 ; 1.961 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6052 ; 0.856 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 466 ; 6.389 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 159 ;36.653 ;24.591 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 605 ;13.831 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;20.416 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 551 ; 0.075 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4098 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 688 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2315 ; 0.663 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 944 ; 0.113 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3731 ; 1.244 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1360 ; 1.774 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1262 ; 2.962 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3NSY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JUL-10. REMARK 100 THE DEPOSITION ID IS D_1000060240. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUL-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.3799 REMARK 200 MONOCHROMATOR : UNKNOWN REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTALCLEAR REMARK 200 DATA SCALING SOFTWARE : CRYSTALCLEAR REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47535 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 48.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : 1.900 REMARK 200 R MERGE (I) : 0.04300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.0 REMARK 200 DATA REDUNDANCY IN SHELL : 1.95 REMARK 200 R MERGE FOR SHELL (I) : 0.13000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: UNNECESSARY REMARK 200 SOFTWARE USED: UNNECESSARY REMARK 200 STARTING MODEL: 1KV7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16% PEG 4000, 0.2 M AMMONIUM ACETATE, REMARK 280 0.1 M SODIUM ACETATE, PH 4.6, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 45.62950 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 29 REMARK 465 SER A 325 REMARK 465 ALA A 326 REMARK 465 SER A 327 REMARK 465 GLY A 328 REMARK 465 ALA A 329 REMARK 465 ASP A 380 REMARK 465 HIS A 381 REMARK 465 SER A 382 REMARK 465 GLN A 383 REMARK 465 MET A 384 REMARK 465 MET A 385 REMARK 465 GLY A 386 REMARK 465 HIS A 387 REMARK 465 MET A 388 REMARK 465 GLY A 389 REMARK 465 HIS A 390 REMARK 465 GLY A 391 REMARK 465 ASN A 392 REMARK 465 MET A 393 REMARK 465 ASN A 394 REMARK 465 HIS A 395 REMARK 465 MET A 396 REMARK 465 ASN A 397 REMARK 465 HIS A 398 REMARK 465 GLY A 399 REMARK 465 GLY A 400 REMARK 465 LYS A 401 REMARK 465 PHE A 402 REMARK 465 LEU A 523 REMARK 465 GLN A 524 REMARK 465 GLY A 525 REMARK 465 ASP A 526 REMARK 465 HIS A 527 REMARK 465 GLY A 528 REMARK 465 LEU A 529 REMARK 465 SER A 530 REMARK 465 ALA A 531 REMARK 465 TRP A 532 REMARK 465 SER A 533 REMARK 465 HIS A 534 REMARK 465 PRO A 535 REMARK 465 GLN A 536 REMARK 465 PHE A 537 REMARK 465 GLU A 538 REMARK 465 LYS A 539 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 74 -135.29 52.83 REMARK 500 HIS A 143 32.23 -140.10 REMARK 500 LYS A 174 12.54 -146.30 REMARK 500 ILE A 178 -70.12 -118.17 REMARK 500 ALA A 241 -17.63 -140.47 REMARK 500 SER A 259 -167.85 -115.68 REMARK 500 ALA A 323 43.31 -79.54 REMARK 500 ALA A 377 92.07 -65.05 REMARK 500 LEU A 517 -41.33 -145.20 REMARK 500 GLN A 518 -54.81 -159.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 601 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 101 NE2 REMARK 620 2 HIS A 446 NE2 174.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 C2O A 602 CU3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 103 ND1 REMARK 620 2 C2O A 602 O1 112.6 REMARK 620 3 HIS A 141 NE2 120.1 103.1 REMARK 620 4 HIS A 501 NE2 104.5 104.6 110.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 C2O A 602 CU2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 143 NE2 REMARK 620 2 C2O A 602 O1 105.3 REMARK 620 3 HIS A 448 NE2 92.6 123.9 REMARK 620 4 HIS A 499 NE2 100.2 119.6 108.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 605 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET A 355 SD REMARK 620 2 ASP A 360 OD1 103.3 REMARK 620 3 ASP A 439 OD2 99.0 105.2 REMARK 620 4 MET A 441 SD 116.8 109.4 121.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 604 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 443 ND1 REMARK 620 2 CYS A 500 SG 121.9 REMARK 620 3 HIS A 505 ND1 111.9 126.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 606 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 488 ND1 REMARK 620 2 HOH A 804 O 91.3 REMARK 620 3 HOH A 813 O 145.8 116.6 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C2O A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 606 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3NSC RELATED DB: PDB REMARK 900 RELATED ID: 3NSD RELATED DB: PDB REMARK 900 RELATED ID: 3NSF RELATED DB: PDB REMARK 900 RELATED ID: 3NT0 RELATED DB: PDB DBREF 3NSY A 29 516 UNP P36649 CUEO_ECOLI 29 516 SEQADV 3NSY SER A 358 UNP P36649 MET 358 ENGINEERED MUTATION SEQADV 3NSY SER A 361 UNP P36649 MET 361 ENGINEERED MUTATION SEQADV 3NSY SER A 362 UNP P36649 MET 362 ENGINEERED MUTATION SEQADV 3NSY SER A 364 UNP P36649 MET 364 ENGINEERED MUTATION SEQADV 3NSY SER A 366 UNP P36649 MET 366 ENGINEERED MUTATION SEQADV 3NSY SER A 368 UNP P36649 MET 368 ENGINEERED MUTATION SEQADV 3NSY LEU A 517 UNP P36649 EXPRESSION TAG SEQADV 3NSY GLN A 518 UNP P36649 EXPRESSION TAG SEQADV 3NSY GLY A 519 UNP P36649 EXPRESSION TAG SEQADV 3NSY ASP A 520 UNP P36649 EXPRESSION TAG SEQADV 3NSY HIS A 521 UNP P36649 EXPRESSION TAG SEQADV 3NSY GLY A 522 UNP P36649 EXPRESSION TAG SEQADV 3NSY LEU A 523 UNP P36649 EXPRESSION TAG SEQADV 3NSY GLN A 524 UNP P36649 EXPRESSION TAG SEQADV 3NSY GLY A 525 UNP P36649 EXPRESSION TAG SEQADV 3NSY ASP A 526 UNP P36649 EXPRESSION TAG SEQADV 3NSY HIS A 527 UNP P36649 EXPRESSION TAG SEQADV 3NSY GLY A 528 UNP P36649 EXPRESSION TAG SEQADV 3NSY LEU A 529 UNP P36649 EXPRESSION TAG SEQADV 3NSY SER A 530 UNP P36649 EXPRESSION TAG SEQADV 3NSY ALA A 531 UNP P36649 EXPRESSION TAG SEQADV 3NSY TRP A 532 UNP P36649 EXPRESSION TAG SEQADV 3NSY SER A 533 UNP P36649 EXPRESSION TAG SEQADV 3NSY HIS A 534 UNP P36649 EXPRESSION TAG SEQADV 3NSY PRO A 535 UNP P36649 EXPRESSION TAG SEQADV 3NSY GLN A 536 UNP P36649 EXPRESSION TAG SEQADV 3NSY PHE A 537 UNP P36649 EXPRESSION TAG SEQADV 3NSY GLU A 538 UNP P36649 EXPRESSION TAG SEQADV 3NSY LYS A 539 UNP P36649 EXPRESSION TAG SEQRES 1 A 511 ALA GLU ARG PRO THR LEU PRO ILE PRO ASP LEU LEU THR SEQRES 2 A 511 THR ASP ALA ARG ASN ARG ILE GLN LEU THR ILE GLY ALA SEQRES 3 A 511 GLY GLN SER THR PHE GLY GLY LYS THR ALA THR THR TRP SEQRES 4 A 511 GLY TYR ASN GLY ASN LEU LEU GLY PRO ALA VAL LYS LEU SEQRES 5 A 511 GLN ARG GLY LYS ALA VAL THR VAL ASP ILE TYR ASN GLN SEQRES 6 A 511 LEU THR GLU GLU THR THR LEU HIS TRP HIS GLY LEU GLU SEQRES 7 A 511 VAL PRO GLY GLU VAL ASP GLY GLY PRO GLN GLY ILE ILE SEQRES 8 A 511 PRO PRO GLY GLY LYS ARG SER VAL THR LEU ASN VAL ASP SEQRES 9 A 511 GLN PRO ALA ALA THR CYS TRP PHE HIS PRO HIS GLN HIS SEQRES 10 A 511 GLY LYS THR GLY ARG GLN VAL ALA MET GLY LEU ALA GLY SEQRES 11 A 511 LEU VAL VAL ILE GLU ASP ASP GLU ILE LEU LYS LEU MET SEQRES 12 A 511 LEU PRO LYS GLN TRP GLY ILE ASP ASP VAL PRO VAL ILE SEQRES 13 A 511 VAL GLN ASP LYS LYS PHE SER ALA ASP GLY GLN ILE ASP SEQRES 14 A 511 TYR GLN LEU ASP VAL MET THR ALA ALA VAL GLY TRP PHE SEQRES 15 A 511 GLY ASP THR LEU LEU THR ASN GLY ALA ILE TYR PRO GLN SEQRES 16 A 511 HIS ALA ALA PRO ARG GLY TRP LEU ARG LEU ARG LEU LEU SEQRES 17 A 511 ASN GLY CYS ASN ALA ARG SER LEU ASN PHE ALA THR SER SEQRES 18 A 511 ASP ASN ARG PRO LEU TYR VAL ILE ALA SER ASP GLY GLY SEQRES 19 A 511 LEU LEU PRO GLU PRO VAL LYS VAL SER GLU LEU PRO VAL SEQRES 20 A 511 LEU MET GLY GLU ARG PHE GLU VAL LEU VAL GLU VAL ASN SEQRES 21 A 511 ASP ASN LYS PRO PHE ASP LEU VAL THR LEU PRO VAL SER SEQRES 22 A 511 GLN MET GLY MET ALA ILE ALA PRO PHE ASP LYS PRO HIS SEQRES 23 A 511 PRO VAL MET ARG ILE GLN PRO ILE ALA ILE SER ALA SER SEQRES 24 A 511 GLY ALA LEU PRO ASP THR LEU SER SER LEU PRO ALA LEU SEQRES 25 A 511 PRO SER LEU GLU GLY LEU THR VAL ARG LYS LEU GLN LEU SEQRES 26 A 511 SER MET ASP PRO SER LEU ASP SER SER GLY SER GLN SER SEQRES 27 A 511 LEU SER GLU LYS TYR GLY ASP GLN ALA MET ALA GLY MET SEQRES 28 A 511 ASP HIS SER GLN MET MET GLY HIS MET GLY HIS GLY ASN SEQRES 29 A 511 MET ASN HIS MET ASN HIS GLY GLY LYS PHE ASP PHE HIS SEQRES 30 A 511 HIS ALA ASN LYS ILE ASN GLY GLN ALA PHE ASP MET ASN SEQRES 31 A 511 LYS PRO MET PHE ALA ALA ALA LYS GLY GLN TYR GLU ARG SEQRES 32 A 511 TRP VAL ILE SER GLY VAL GLY ASP MET MET LEU HIS PRO SEQRES 33 A 511 PHE HIS ILE HIS GLY THR GLN PHE ARG ILE LEU SER GLU SEQRES 34 A 511 ASN GLY LYS PRO PRO ALA ALA HIS ARG ALA GLY TRP LYS SEQRES 35 A 511 ASP THR VAL LYS VAL GLU GLY ASN VAL SER GLU VAL LEU SEQRES 36 A 511 VAL LYS PHE ASN HIS ASP ALA PRO LYS GLU HIS ALA TYR SEQRES 37 A 511 MET ALA HIS CYS HIS LEU LEU GLU HIS GLU ASP THR GLY SEQRES 38 A 511 MET MET LEU GLY PHE THR VAL LEU GLN GLY ASP HIS GLY SEQRES 39 A 511 LEU GLN GLY ASP HIS GLY LEU SER ALA TRP SER HIS PRO SEQRES 40 A 511 GLN PHE GLU LYS HET CU A 604 1 HET CU A 601 1 HET C2O A 602 3 HET CU A 605 1 HET CU A 606 1 HETNAM CU COPPER (II) ION HETNAM C2O CU-O-CU LINKAGE FORMUL 2 CU 4(CU 2+) FORMUL 4 C2O CU2 O FORMUL 7 HOH *305(H2 O) HELIX 1 1 PRO A 108 ASP A 112 5 5 HELIX 2 2 LYS A 147 GLY A 155 1 9 HELIX 3 3 ASP A 164 LYS A 169 1 6 HELIX 4 4 ASP A 201 GLY A 208 1 8 HELIX 5 5 ASP A 356 GLY A 372 1 17 HELIX 6 6 ASP A 373 MET A 376 5 4 HELIX 7 7 ALA A 463 ALA A 467 5 5 HELIX 8 8 PRO A 491 ALA A 495 5 5 HELIX 9 9 LEU A 502 THR A 508 1 7 SHEET 1 A 5 LEU A 39 LEU A 40 0 SHEET 2 A 5 ALA A 77 GLN A 81 1 O ALA A 77 N LEU A 40 SHEET 3 A 5 GLY A 158 GLU A 163 1 O VAL A 161 N VAL A 78 SHEET 4 A 5 ALA A 136 HIS A 141 -1 N ALA A 136 O ILE A 162 SHEET 5 A 5 HIS A 101 HIS A 103 -1 N HIS A 101 O HIS A 141 SHEET 1 B 4 LYS A 62 TYR A 69 0 SHEET 2 B 4 ARG A 47 PHE A 59 -1 N GLY A 55 O THR A 66 SHEET 3 B 4 ALA A 85 ASN A 92 1 O TYR A 91 N ILE A 52 SHEET 4 B 4 LYS A 124 ASN A 130 -1 O LEU A 129 N VAL A 86 SHEET 1 C 6 THR A 213 THR A 216 0 SHEET 2 C 6 ASP A 180 LYS A 188 -1 N GLN A 186 O LEU A 215 SHEET 3 C 6 GLY A 229 ASN A 237 1 O ARG A 232 N VAL A 181 SHEET 4 C 6 ARG A 280 VAL A 287 -1 O VAL A 287 N GLY A 229 SHEET 5 C 6 LEU A 254 SER A 259 -1 N TYR A 255 O LEU A 284 SHEET 6 C 6 GLY A 262 VAL A 270 -1 O VAL A 270 N LEU A 254 SHEET 1 D 5 GLN A 223 PRO A 227 0 SHEET 2 D 5 HIS A 314 ILE A 322 1 O ARG A 318 N HIS A 224 SHEET 3 D 5 PHE A 293 THR A 297 -1 N PHE A 293 O ILE A 319 SHEET 4 D 5 LEU A 244 THR A 248 -1 N ALA A 247 O VAL A 296 SHEET 5 D 5 LEU A 273 VAL A 275 -1 O VAL A 275 N LEU A 244 SHEET 1 E 6 ASN A 408 ILE A 410 0 SHEET 2 E 6 VAL A 348 MET A 355 -1 N SER A 354 O LYS A 409 SHEET 3 E 6 GLU A 430 SER A 435 1 O VAL A 433 N LEU A 351 SHEET 4 E 6 VAL A 479 VAL A 484 -1 O SER A 480 N ILE A 434 SHEET 5 E 6 PHE A 452 SER A 456 -1 N ARG A 453 O LEU A 483 SHEET 6 E 6 TRP A 469 LYS A 470 -1 O LYS A 470 N PHE A 452 SHEET 1 F 5 PHE A 422 ALA A 424 0 SHEET 2 F 5 MET A 511 VAL A 516 1 O THR A 515 N ALA A 424 SHEET 3 F 5 TYR A 496 CYS A 500 -1 N TYR A 496 O PHE A 514 SHEET 4 F 5 HIS A 443 ILE A 447 -1 N HIS A 446 O HIS A 499 SHEET 5 F 5 THR A 472 VAL A 475 -1 O VAL A 475 N HIS A 443 LINK NE2 HIS A 101 CU CU A 601 1555 1555 1.93 LINK ND1 HIS A 103 CU3 C2O A 602 1555 1555 2.10 LINK NE2 HIS A 141 CU3 C2O A 602 1555 1555 2.03 LINK NE2 HIS A 143 CU2 C2O A 602 1555 1555 2.19 LINK SD MET A 355 CU CU A 605 1555 1555 2.28 LINK OD1 ASP A 360 CU CU A 605 1555 1555 1.96 LINK OD2 ASP A 439 CU CU A 605 1555 1555 2.11 LINK SD MET A 441 CU CU A 605 1555 1555 2.20 LINK ND1 HIS A 443 CU CU A 604 1555 1555 2.12 LINK NE2 HIS A 446 CU CU A 601 1555 1555 1.87 LINK NE2 HIS A 448 CU2 C2O A 602 1555 1555 2.10 LINK ND1 HIS A 488 CU CU A 606 1555 1555 2.07 LINK NE2 HIS A 499 CU2 C2O A 602 1555 1555 2.02 LINK SG CYS A 500 CU CU A 604 1555 1555 2.21 LINK NE2 HIS A 501 CU3 C2O A 602 1555 1555 2.18 LINK ND1 HIS A 505 CU CU A 604 1555 1555 2.01 LINK CU CU A 606 O HOH A 804 1555 1555 2.30 LINK CU CU A 606 O HOH A 813 1555 1555 2.25 CISPEP 1 ALA A 308 PRO A 309 0 2.40 SITE 1 AC1 4 HIS A 443 CYS A 500 HIS A 505 MET A 510 SITE 1 AC2 6 HOH A 17 HIS A 101 HIS A 103 HIS A 446 SITE 2 AC2 6 HIS A 448 C2O A 602 SITE 1 AC3 9 HIS A 101 HIS A 103 HIS A 141 HIS A 143 SITE 2 AC3 9 HIS A 446 HIS A 448 HIS A 499 HIS A 501 SITE 3 AC3 9 CU A 601 SITE 1 AC4 4 MET A 355 ASP A 360 ASP A 439 MET A 441 SITE 1 AC5 3 HIS A 488 HOH A 804 HOH A 813 CRYST1 50.052 91.259 53.979 90.00 102.34 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019979 0.000000 0.004371 0.00000 SCALE2 0.000000 0.010958 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018964 0.00000