data_3NUF # _entry.id 3NUF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.312 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3NUF RCSB RCSB060292 WWPDB D_1000060292 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 392607 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3NUF _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-07-06 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of a PRD-containing transcription regulator (LSEI_2718) from Lactobacillus casei ATCC 334 at 1.38 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3NUF _cell.length_a 67.160 _cell.length_b 67.160 _cell.length_c 99.733 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 16 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3NUF _symmetry.Int_Tables_number 96 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PRD-containing transcription regulator' 13150.302 2 ? ? ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 7 ? ? ? ? 3 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 1 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 5 non-polymer syn 'TETRAETHYLENE GLYCOL' 194.226 1 ? ? ? ? 6 water nat water 18.015 316 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)TPLDANVELPTEVKA(MSE)IEQSSDAQAATALVNYVIKLAAAAEIHFTDLQLQVLTNHLIE(MSE)LGRSKSG EQLPAVDPT(MSE)FAEVSQKSLDLADQVVQHIGHLEVAEKYVLSIHFEAAQDKI ; _entity_poly.pdbx_seq_one_letter_code_can ;GMTPLDANVELPTEVKAMIEQSSDAQAATALVNYVIKLAAAAEIHFTDLQLQVLTNHLIEMLGRSKSGEQLPAVDPTMFA EVSQKSLDLADQVVQHIGHLEVAEKYVLSIHFEAAQDKI ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier 392607 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 THR n 1 4 PRO n 1 5 LEU n 1 6 ASP n 1 7 ALA n 1 8 ASN n 1 9 VAL n 1 10 GLU n 1 11 LEU n 1 12 PRO n 1 13 THR n 1 14 GLU n 1 15 VAL n 1 16 LYS n 1 17 ALA n 1 18 MSE n 1 19 ILE n 1 20 GLU n 1 21 GLN n 1 22 SER n 1 23 SER n 1 24 ASP n 1 25 ALA n 1 26 GLN n 1 27 ALA n 1 28 ALA n 1 29 THR n 1 30 ALA n 1 31 LEU n 1 32 VAL n 1 33 ASN n 1 34 TYR n 1 35 VAL n 1 36 ILE n 1 37 LYS n 1 38 LEU n 1 39 ALA n 1 40 ALA n 1 41 ALA n 1 42 ALA n 1 43 GLU n 1 44 ILE n 1 45 HIS n 1 46 PHE n 1 47 THR n 1 48 ASP n 1 49 LEU n 1 50 GLN n 1 51 LEU n 1 52 GLN n 1 53 VAL n 1 54 LEU n 1 55 THR n 1 56 ASN n 1 57 HIS n 1 58 LEU n 1 59 ILE n 1 60 GLU n 1 61 MSE n 1 62 LEU n 1 63 GLY n 1 64 ARG n 1 65 SER n 1 66 LYS n 1 67 SER n 1 68 GLY n 1 69 GLU n 1 70 GLN n 1 71 LEU n 1 72 PRO n 1 73 ALA n 1 74 VAL n 1 75 ASP n 1 76 PRO n 1 77 THR n 1 78 MSE n 1 79 PHE n 1 80 ALA n 1 81 GLU n 1 82 VAL n 1 83 SER n 1 84 GLN n 1 85 LYS n 1 86 SER n 1 87 LEU n 1 88 ASP n 1 89 LEU n 1 90 ALA n 1 91 ASP n 1 92 GLN n 1 93 VAL n 1 94 VAL n 1 95 GLN n 1 96 HIS n 1 97 ILE n 1 98 GLY n 1 99 HIS n 1 100 LEU n 1 101 GLU n 1 102 VAL n 1 103 ALA n 1 104 GLU n 1 105 LYS n 1 106 TYR n 1 107 VAL n 1 108 LEU n 1 109 SER n 1 110 ILE n 1 111 HIS n 1 112 PHE n 1 113 GLU n 1 114 ALA n 1 115 ALA n 1 116 GLN n 1 117 ASP n 1 118 LYS n 1 119 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene LSEI_2718 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 334' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Lactobacillus casei' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 321967 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q034D9_LACC3 _struct_ref.pdbx_db_accession Q034D9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTPLDANVELPTEVKAMIEQSSDAQAATALVNYVIKLAAAAEIHFTDLQLQVLTNHLIEMLGRSKSGEQLPAVDPTMFAE VSQKSLDLADQVVQHIGHLEVAEKYVLSIHFEAAQDKI ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3NUF A 2 ? 119 ? Q034D9 1 ? 118 ? 1 118 2 1 3NUF B 2 ? 119 ? Q034D9 1 ? 118 ? 1 118 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3NUF GLY A 1 ? UNP Q034D9 ? ? 'EXPRESSION TAG' 0 1 2 3NUF GLY B 1 ? UNP Q034D9 ? ? 'EXPRESSION TAG' 0 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PG4 non-polymer . 'TETRAETHYLENE GLYCOL' ? 'C8 H18 O5' 194.226 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3NUF # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.14 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 42.47 _exptl_crystal.description 'DATA WERE SCALED USING XSCALE WITH FRIEDEL PAIRS KEPT AS SEPARATE WHEN COMPUTING R-SYM, COMPLETENESS AND ' _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details ;1.6000M ammonium sulfate, 4.0000% polyethylene glycol 400, 0.1M HEPES pH 7.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat collimating mirror, toroid focusing mirror' _diffrn_detector.pdbx_collection_date 2009-11-05 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97954 1.0 3 0.97939 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_wavelength_list 0.91837,0.97954,0.97939 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3NUF _reflns.d_resolution_high 1.38 _reflns.d_resolution_low 28.759 _reflns.number_obs 47575 _reflns.pdbx_Rmerge_I_obs 0.054 _reflns.pdbx_netI_over_sigmaI 13.650 _reflns.percent_possible_obs 99.400 _reflns.B_iso_Wilson_estimate 16.639 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.38 1.43 32070 ? 8733 0.877 1.7 ? ? ? ? ? 96.00 1 1 1.43 1.49 34944 ? 9368 0.621 2.3 ? ? ? ? ? 99.50 2 1 1.49 1.55 29697 ? 7930 0.428 3.4 ? ? ? ? ? 99.70 3 1 1.55 1.64 37235 ? 9903 0.308 4.7 ? ? ? ? ? 99.80 4 1 1.64 1.74 32829 ? 8683 0.223 6.3 ? ? ? ? ? 99.90 5 1 1.74 1.87 33087 ? 8712 0.150 9.0 ? ? ? ? ? 99.90 6 1 1.87 2.06 34672 ? 9090 0.087 14.3 ? ? ? ? ? 99.90 7 1 2.06 2.36 34768 ? 9079 0.049 23.3 ? ? ? ? ? 99.90 8 1 2.36 2.97 34308 ? 8949 0.037 29.8 ? ? ? ? ? 99.90 9 1 2.97 28.759 34474 ? 9021 0.028 41.0 ? ? ? ? ? 99.40 10 1 # _refine.entry_id 3NUF _refine.ls_d_res_high 1.380 _refine.ls_d_res_low 28.759 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.700 _refine.ls_number_reflns_obs 47498 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3. ATOM RECORDS CONTAIN SUM OF TLS AND RESIDUAL B FACTORS. ANISOU RECORDS CONTAIN SUM OF TLS AND RESIDUAL U FACTORS. 4. WATERS WERE EXCLUDED FROM AUTOMATIC TLS ASSIGNMENT. 5. SULFATE (SO4) IONS, AND PEG-400 FRAGMENTS (PG4 AND PEG) ARE MODELED FROM CRYSTALLIZATION CONDITIONS. 6. ETHYLENE GLYCOL (EDO) MOLECULES ARE MODELED FROM CRYO CONDITIONS. 7. THERE IS A 5.4 SIGMA PEAK IN THE FOFC ELECTRON DENSITY MAP NEAR CARBONYL OXYGEN OF VALINE 106, WHICH COULD BE A WATER OR AMMONIUM ION, THIS REMAINS UNMODELLED. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.172 _refine.ls_R_factor_R_work 0.171 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.192 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 2409 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 20.531 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.310 _refine.aniso_B[2][2] 0.310 _refine.aniso_B[3][3] -0.620 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.968 _refine.correlation_coeff_Fo_to_Fc_free 0.958 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free 0.061 _refine.overall_SU_ML 0.037 _refine.overall_SU_B 1.815 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 64.26 _refine.B_iso_min 3.40 _refine.occupancy_max 1.00 _refine.occupancy_min 0.25 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R 0.061 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1748 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 53 _refine_hist.number_atoms_solvent 316 _refine_hist.number_atoms_total 2117 _refine_hist.d_res_high 1.380 _refine_hist.d_res_low 28.759 # loop_ _refine_ls_restr.type _refine_ls_restr.pdbx_refine_id _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 'X-RAY DIFFRACTION' 2039 0.018 0.022 ? ? r_bond_other_d 'X-RAY DIFFRACTION' 1304 0.001 0.020 ? ? r_angle_refined_deg 'X-RAY DIFFRACTION' 2772 1.567 1.976 ? ? r_angle_other_deg 'X-RAY DIFFRACTION' 3262 0.943 3.000 ? ? r_dihedral_angle_1_deg 'X-RAY DIFFRACTION' 271 4.575 5.000 ? ? r_dihedral_angle_2_deg 'X-RAY DIFFRACTION' 88 36.322 27.159 ? ? r_dihedral_angle_3_deg 'X-RAY DIFFRACTION' 357 12.195 15.000 ? ? r_dihedral_angle_4_deg 'X-RAY DIFFRACTION' 2 13.886 15.000 ? ? r_chiral_restr 'X-RAY DIFFRACTION' 324 0.095 0.200 ? ? r_gen_planes_refined 'X-RAY DIFFRACTION' 2323 0.008 0.020 ? ? r_gen_planes_other 'X-RAY DIFFRACTION' 343 0.003 0.020 ? ? r_mcbond_it 'X-RAY DIFFRACTION' 1294 1.555 3.000 ? ? r_mcbond_other 'X-RAY DIFFRACTION' 505 0.409 3.000 ? ? r_mcangle_it 'X-RAY DIFFRACTION' 2107 2.673 5.000 ? ? r_scbond_it 'X-RAY DIFFRACTION' 745 4.511 8.000 ? ? r_scangle_it 'X-RAY DIFFRACTION' 665 7.090 11.000 ? ? # _refine_ls_shell.d_res_high 1.380 _refine_ls_shell.d_res_low 1.415 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 98.500 _refine_ls_shell.number_reflns_R_work 3236 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.282 _refine_ls_shell.R_factor_R_free 0.309 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 175 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 3411 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3NUF _struct.title 'Crystal structure of a PRD-containing transcription regulator (LSEI_2718) from Lactobacillus casei ATCC 334 at 1.38 A resolution' _struct.pdbx_descriptor 'PRD-containing transcription regulator' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-BIOLOGY, TRANSCRIPTION, TRANSCRIPTION REGULATOR ; _struct_keywords.pdbx_keywords 'Transcription regulator' _struct_keywords.entry_id 3NUF # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 3 ? I N N 4 ? J N N 2 ? K N N 2 ? L N N 5 ? M N N 6 ? N N N 6 ? # _struct_biol.id 1 _struct_biol.details ;ANALYTICAL SIZE EXCLUSION CHROMATOGRAPHY WITH STATIC LIGHT SCATTERING SUPPORTS THE ASSIGNMENT OF A MONOMER AS A SIGNIFICANT OLIGOMERIZATION STATE IN SOLUTION. ANALYSIS OF THE CRYSTAL PACKING SUGGESTS BOTH THE MONOMER AND THE DIMER IN THE CRYSTAL MIGHT BE STABLE. ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 12 ? SER A 22 ? PRO A 11 SER A 21 1 ? 11 HELX_P HELX_P2 2 ASP A 24 ? ALA A 42 ? ASP A 23 ALA A 41 1 ? 19 HELX_P HELX_P3 3 THR A 47 ? GLY A 68 ? THR A 46 GLY A 67 1 ? 22 HELX_P HELX_P4 4 ASP A 75 ? ALA A 80 ? ASP A 74 ALA A 79 5 ? 6 HELX_P HELX_P5 5 SER A 83 ? GLY A 98 ? SER A 82 GLY A 97 1 ? 16 HELX_P HELX_P6 6 GLU A 101 ? ALA A 103 ? GLU A 100 ALA A 102 5 ? 3 HELX_P HELX_P7 7 GLU A 104 ? GLN A 116 ? GLU A 103 GLN A 115 1 ? 13 HELX_P HELX_P8 8 PRO B 12 ? SER B 22 ? PRO B 11 SER B 21 1 ? 11 HELX_P HELX_P9 9 ASP B 24 ? ALA B 42 ? ASP B 23 ALA B 41 1 ? 19 HELX_P HELX_P10 10 THR B 47 ? GLY B 68 ? THR B 46 GLY B 67 1 ? 22 HELX_P HELX_P11 11 ASP B 75 ? ALA B 80 ? ASP B 74 ALA B 79 5 ? 6 HELX_P HELX_P12 12 SER B 83 ? GLY B 98 ? SER B 82 GLY B 97 1 ? 16 HELX_P HELX_P13 13 GLU B 101 ? ALA B 103 ? GLU B 100 ALA B 102 5 ? 3 HELX_P HELX_P14 14 GLU B 104 ? GLN B 116 ? GLU B 103 GLN B 115 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? A MSE 2 C A ? ? 1_555 A THR 3 N ? ? A MSE 1 A THR 2 1_555 ? ? ? ? ? ? ? 1.330 ? covale2 covale both ? A MSE 2 C B ? ? 1_555 A THR 3 N ? ? A MSE 1 A THR 2 1_555 ? ? ? ? ? ? ? 1.338 ? covale3 covale both ? A MSE 2 C C ? ? 1_555 A THR 3 N ? ? A MSE 1 A THR 2 1_555 ? ? ? ? ? ? ? 1.333 ? covale4 covale both ? A ALA 17 C ? ? ? 1_555 A MSE 18 N A ? A ALA 16 A MSE 17 1_555 ? ? ? ? ? ? ? 1.337 ? covale5 covale both ? A ALA 17 C ? ? ? 1_555 A MSE 18 N B ? A ALA 16 A MSE 17 1_555 ? ? ? ? ? ? ? 1.329 ? covale6 covale both ? A MSE 18 C A ? ? 1_555 A ILE 19 N ? ? A MSE 17 A ILE 18 1_555 ? ? ? ? ? ? ? 1.329 ? covale7 covale both ? A MSE 18 C B ? ? 1_555 A ILE 19 N ? ? A MSE 17 A ILE 18 1_555 ? ? ? ? ? ? ? 1.318 ? covale8 covale both ? A GLU 60 C A ? ? 1_555 A MSE 61 N ? ? A GLU 59 A MSE 60 1_555 ? ? ? ? ? ? ? 1.326 ? covale9 covale both ? A GLU 60 C B ? ? 1_555 A MSE 61 N ? ? A GLU 59 A MSE 60 1_555 ? ? ? ? ? ? ? 1.323 ? covale10 covale both ? A MSE 61 C ? ? ? 1_555 A LEU 62 N ? ? A MSE 60 A LEU 61 1_555 ? ? ? ? ? ? ? 1.338 ? covale11 covale both ? A THR 77 C ? ? ? 1_555 A MSE 78 N ? ? A THR 76 A MSE 77 1_555 ? ? ? ? ? ? ? 1.329 ? covale12 covale both ? A MSE 78 C ? ? ? 1_555 A PHE 79 N ? ? A MSE 77 A PHE 78 1_555 ? ? ? ? ? ? ? 1.337 ? covale13 covale both ? B ALA 17 C ? ? ? 1_555 B MSE 18 N ? ? B ALA 16 B MSE 17 1_555 ? ? ? ? ? ? ? 1.334 ? covale14 covale both ? B MSE 18 C ? ? ? 1_555 B ILE 19 N ? ? B MSE 17 B ILE 18 1_555 ? ? ? ? ? ? ? 1.307 ? covale15 covale both ? B GLU 60 C A ? ? 1_555 B MSE 61 N A ? B GLU 59 B MSE 60 1_555 ? ? ? ? ? ? ? 1.333 ? covale16 covale both ? B GLU 60 C B ? ? 1_555 B MSE 61 N B ? B GLU 59 B MSE 60 1_555 ? ? ? ? ? ? ? 1.336 ? covale17 covale both ? B MSE 61 C A ? ? 1_555 B LEU 62 N ? ? B MSE 60 B LEU 61 1_555 ? ? ? ? ? ? ? 1.344 ? covale18 covale both ? B MSE 61 C B ? ? 1_555 B LEU 62 N ? ? B MSE 60 B LEU 61 1_555 ? ? ? ? ? ? ? 1.313 ? covale19 covale both ? B THR 77 C ? ? ? 1_555 B MSE 78 N A ? B THR 76 B MSE 77 1_555 ? ? ? ? ? ? ? 1.330 ? covale20 covale both ? B THR 77 C ? ? ? 1_555 B MSE 78 N B ? B THR 76 B MSE 77 1_555 ? ? ? ? ? ? ? 1.333 ? covale21 covale both ? B MSE 78 C A ? ? 1_555 B PHE 79 N ? ? B MSE 77 B PHE 78 1_555 ? ? ? ? ? ? ? 1.337 ? covale22 covale both ? B MSE 78 C B ? ? 1_555 B PHE 79 N ? ? B MSE 77 B PHE 78 1_555 ? ? ? ? ? ? ? 1.337 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE EDO A 302' AC2 Software ? ? ? ? 9 'BINDING SITE FOR RESIDUE EDO A 303' AC3 Software ? ? ? ? 9 'BINDING SITE FOR RESIDUE EDO A 305' AC4 Software ? ? ? ? 9 'BINDING SITE FOR RESIDUE EDO A 307' AC5 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE EDO A 308' AC6 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE PEG A 309' AC7 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE SO4 B 301' AC8 Software ? ? ? ? 9 'BINDING SITE FOR RESIDUE EDO B 304' AC9 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE EDO B 306' BC1 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE PG4 B 310' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 GLU A 20 ? GLU A 19 . ? 4_455 ? 2 AC1 7 ASP A 75 ? ASP A 74 . ? 1_555 ? 3 AC1 7 THR A 77 ? THR A 76 . ? 1_555 ? 4 AC1 7 HOH M . ? HOH A 323 . ? 1_555 ? 5 AC1 7 HOH M . ? HOH A 564 . ? 1_555 ? 6 AC1 7 THR B 47 ? THR B 46 . ? 1_555 ? 7 AC1 7 GLN B 50 ? GLN B 49 . ? 1_555 ? 8 AC2 9 SER A 65 ? SER A 64 . ? 1_555 ? 9 AC2 9 LYS A 66 ? LYS A 65 . ? 1_555 ? 10 AC2 9 GLY A 68 ? GLY A 67 . ? 1_555 ? 11 AC2 9 HOH M . ? HOH A 580 . ? 1_555 ? 12 AC2 9 LYS B 66 ? LYS B 65 . ? 7_555 ? 13 AC2 9 VAL B 102 ? VAL B 101 . ? 6_455 ? 14 AC2 9 HOH N . ? HOH B 342 . ? 6_455 ? 15 AC2 9 HOH N . ? HOH B 551 . ? 6_455 ? 16 AC2 9 HOH N . ? HOH B 618 . ? 6_455 ? 17 AC3 9 ASP A 24 ? ASP A 23 . ? 1_555 ? 18 AC3 9 LYS A 66 ? LYS A 65 . ? 1_555 ? 19 AC3 9 VAL A 102 ? VAL A 101 . ? 3_554 ? 20 AC3 9 HOH M . ? HOH A 311 . ? 3_554 ? 21 AC3 9 HOH M . ? HOH A 625 . ? 1_555 ? 22 AC3 9 SER B 65 ? SER B 64 . ? 7_555 ? 23 AC3 9 LYS B 66 ? LYS B 65 . ? 7_555 ? 24 AC3 9 HIS B 99 ? HIS B 98 . ? 7_555 ? 25 AC3 9 HOH N . ? HOH B 429 . ? 7_555 ? 26 AC4 9 SER A 23 ? SER A 22 . ? 1_555 ? 27 AC4 9 ASP A 24 ? ASP A 23 . ? 1_555 ? 28 AC4 9 ILE A 59 ? ILE A 58 . ? 1_555 ? 29 AC4 9 GLY A 63 ? GLY A 62 . ? 1_555 ? 30 AC4 9 LYS A 66 ? LYS A 65 . ? 1_555 ? 31 AC4 9 HOH M . ? HOH A 437 . ? 1_555 ? 32 AC4 9 HOH M . ? HOH A 605 . ? 1_555 ? 33 AC4 9 SER B 67 ? SER B 66 . ? 7_555 ? 34 AC4 9 HOH N . ? HOH B 436 . ? 7_555 ? 35 AC5 3 TYR A 34 ? TYR A 33 . ? 1_555 ? 36 AC5 3 GLN A 92 ? GLN A 91 . ? 1_555 ? 37 AC5 3 HIS A 96 ? HIS A 95 . ? 1_555 ? 38 AC6 3 HIS A 111 ? HIS A 110 . ? 1_555 ? 39 AC6 3 HOH M . ? HOH A 513 . ? 1_555 ? 40 AC6 3 HOH M . ? HOH A 563 . ? 1_555 ? 41 AC7 4 TYR B 34 ? TYR B 33 . ? 1_555 ? 42 AC7 4 GLN B 92 ? GLN B 91 . ? 1_555 ? 43 AC7 4 HIS B 96 ? HIS B 95 . ? 1_555 ? 44 AC7 4 HOH N . ? HOH B 339 . ? 1_555 ? 45 AC8 9 SER A 67 ? SER A 66 . ? 7_555 ? 46 AC8 9 HOH M . ? HOH A 426 . ? 7_555 ? 47 AC8 9 SER B 23 ? SER B 22 . ? 1_555 ? 48 AC8 9 ASP B 24 ? ASP B 23 . ? 1_555 ? 49 AC8 9 ILE B 59 ? ILE B 58 . ? 1_555 ? 50 AC8 9 GLY B 63 ? GLY B 62 . ? 1_555 ? 51 AC8 9 LYS B 66 ? LYS B 65 . ? 1_555 ? 52 AC8 9 HOH N . ? HOH B 414 . ? 1_555 ? 53 AC8 9 HOH N . ? HOH B 534 . ? 1_555 ? 54 AC9 8 PRO B 72 ? PRO B 71 . ? 1_555 ? 55 AC9 8 ALA B 73 ? ALA B 72 . ? 1_555 ? 56 AC9 8 VAL B 74 ? VAL B 73 . ? 1_555 ? 57 AC9 8 GLU B 101 ? GLU B 100 . ? 1_555 ? 58 AC9 8 ALA B 103 ? ALA B 102 . ? 1_555 ? 59 AC9 8 GLU B 104 ? GLU B 103 . ? 1_555 ? 60 AC9 8 HOH N . ? HOH B 331 . ? 1_555 ? 61 AC9 8 HOH N . ? HOH B 438 . ? 1_555 ? 62 BC1 7 MSE A 78 ? MSE A 77 . ? 1_555 ? 63 BC1 7 PHE A 79 ? PHE A 78 . ? 1_555 ? 64 BC1 7 MSE B 78 ? MSE B 77 . ? 1_555 ? 65 BC1 7 PHE B 79 ? PHE B 78 . ? 1_555 ? 66 BC1 7 HOH N . ? HOH B 422 . ? 1_555 ? 67 BC1 7 HOH N . ? HOH B 612 . ? 1_555 ? 68 BC1 7 HOH N . ? HOH B 624 . ? 1_555 ? # _atom_sites.entry_id 3NUF _atom_sites.fract_transf_matrix[1][1] 0.014890 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014890 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010027 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 THR 3 2 2 THR THR A . n A 1 4 PRO 4 3 3 PRO PRO A . n A 1 5 LEU 5 4 4 LEU LEU A . n A 1 6 ASP 6 5 5 ASP ASP A . n A 1 7 ALA 7 6 6 ALA ALA A . n A 1 8 ASN 8 7 7 ASN ASN A . n A 1 9 VAL 9 8 8 VAL VAL A . n A 1 10 GLU 10 9 9 GLU GLU A . n A 1 11 LEU 11 10 10 LEU LEU A . n A 1 12 PRO 12 11 11 PRO PRO A . n A 1 13 THR 13 12 12 THR THR A . n A 1 14 GLU 14 13 13 GLU GLU A . n A 1 15 VAL 15 14 14 VAL VAL A . n A 1 16 LYS 16 15 15 LYS LYS A . n A 1 17 ALA 17 16 16 ALA ALA A . n A 1 18 MSE 18 17 17 MSE MSE A . n A 1 19 ILE 19 18 18 ILE ILE A . n A 1 20 GLU 20 19 19 GLU GLU A . n A 1 21 GLN 21 20 20 GLN GLN A . n A 1 22 SER 22 21 21 SER SER A . n A 1 23 SER 23 22 22 SER SER A . n A 1 24 ASP 24 23 23 ASP ASP A . n A 1 25 ALA 25 24 24 ALA ALA A . n A 1 26 GLN 26 25 25 GLN GLN A . n A 1 27 ALA 27 26 26 ALA ALA A . n A 1 28 ALA 28 27 27 ALA ALA A . n A 1 29 THR 29 28 28 THR THR A . n A 1 30 ALA 30 29 29 ALA ALA A . n A 1 31 LEU 31 30 30 LEU LEU A . n A 1 32 VAL 32 31 31 VAL VAL A . n A 1 33 ASN 33 32 32 ASN ASN A . n A 1 34 TYR 34 33 33 TYR TYR A . n A 1 35 VAL 35 34 34 VAL VAL A . n A 1 36 ILE 36 35 35 ILE ILE A . n A 1 37 LYS 37 36 36 LYS LYS A . n A 1 38 LEU 38 37 37 LEU LEU A . n A 1 39 ALA 39 38 38 ALA ALA A . n A 1 40 ALA 40 39 39 ALA ALA A . n A 1 41 ALA 41 40 40 ALA ALA A . n A 1 42 ALA 42 41 41 ALA ALA A . n A 1 43 GLU 43 42 42 GLU GLU A . n A 1 44 ILE 44 43 43 ILE ILE A . n A 1 45 HIS 45 44 44 HIS HIS A . n A 1 46 PHE 46 45 45 PHE PHE A . n A 1 47 THR 47 46 46 THR THR A . n A 1 48 ASP 48 47 47 ASP ASP A . n A 1 49 LEU 49 48 48 LEU LEU A . n A 1 50 GLN 50 49 49 GLN GLN A . n A 1 51 LEU 51 50 50 LEU LEU A . n A 1 52 GLN 52 51 51 GLN GLN A . n A 1 53 VAL 53 52 52 VAL VAL A . n A 1 54 LEU 54 53 53 LEU LEU A . n A 1 55 THR 55 54 54 THR THR A . n A 1 56 ASN 56 55 55 ASN ASN A . n A 1 57 HIS 57 56 56 HIS HIS A . n A 1 58 LEU 58 57 57 LEU LEU A . n A 1 59 ILE 59 58 58 ILE ILE A . n A 1 60 GLU 60 59 59 GLU GLU A . n A 1 61 MSE 61 60 60 MSE MSE A . n A 1 62 LEU 62 61 61 LEU LEU A . n A 1 63 GLY 63 62 62 GLY GLY A . n A 1 64 ARG 64 63 63 ARG ARG A . n A 1 65 SER 65 64 64 SER SER A . n A 1 66 LYS 66 65 65 LYS LYS A . n A 1 67 SER 67 66 66 SER SER A . n A 1 68 GLY 68 67 67 GLY GLY A . n A 1 69 GLU 69 68 68 GLU GLU A . n A 1 70 GLN 70 69 69 GLN GLN A . n A 1 71 LEU 71 70 70 LEU LEU A . n A 1 72 PRO 72 71 71 PRO PRO A . n A 1 73 ALA 73 72 72 ALA ALA A . n A 1 74 VAL 74 73 73 VAL VAL A . n A 1 75 ASP 75 74 74 ASP ASP A . n A 1 76 PRO 76 75 75 PRO PRO A . n A 1 77 THR 77 76 76 THR THR A . n A 1 78 MSE 78 77 77 MSE MSE A . n A 1 79 PHE 79 78 78 PHE PHE A . n A 1 80 ALA 80 79 79 ALA ALA A . n A 1 81 GLU 81 80 80 GLU GLU A . n A 1 82 VAL 82 81 81 VAL VAL A . n A 1 83 SER 83 82 82 SER SER A . n A 1 84 GLN 84 83 83 GLN GLN A . n A 1 85 LYS 85 84 84 LYS LYS A . n A 1 86 SER 86 85 85 SER SER A . n A 1 87 LEU 87 86 86 LEU LEU A . n A 1 88 ASP 88 87 87 ASP ASP A . n A 1 89 LEU 89 88 88 LEU LEU A . n A 1 90 ALA 90 89 89 ALA ALA A . n A 1 91 ASP 91 90 90 ASP ASP A . n A 1 92 GLN 92 91 91 GLN GLN A . n A 1 93 VAL 93 92 92 VAL VAL A . n A 1 94 VAL 94 93 93 VAL VAL A . n A 1 95 GLN 95 94 94 GLN GLN A . n A 1 96 HIS 96 95 95 HIS HIS A . n A 1 97 ILE 97 96 96 ILE ILE A . n A 1 98 GLY 98 97 97 GLY GLY A . n A 1 99 HIS 99 98 98 HIS HIS A . n A 1 100 LEU 100 99 99 LEU LEU A . n A 1 101 GLU 101 100 100 GLU GLU A . n A 1 102 VAL 102 101 101 VAL VAL A . n A 1 103 ALA 103 102 102 ALA ALA A . n A 1 104 GLU 104 103 103 GLU GLU A . n A 1 105 LYS 105 104 104 LYS LYS A . n A 1 106 TYR 106 105 105 TYR TYR A . n A 1 107 VAL 107 106 106 VAL VAL A . n A 1 108 LEU 108 107 107 LEU LEU A . n A 1 109 SER 109 108 108 SER SER A . n A 1 110 ILE 110 109 109 ILE ILE A . n A 1 111 HIS 111 110 110 HIS HIS A . n A 1 112 PHE 112 111 111 PHE PHE A . n A 1 113 GLU 113 112 112 GLU GLU A . n A 1 114 ALA 114 113 113 ALA ALA A . n A 1 115 ALA 115 114 114 ALA ALA A . n A 1 116 GLN 116 115 115 GLN GLN A . n A 1 117 ASP 117 116 116 ASP ASP A . n A 1 118 LYS 118 117 117 LYS LYS A . n A 1 119 ILE 119 118 118 ILE ILE A . n B 1 1 GLY 1 0 ? ? ? B . n B 1 2 MSE 2 1 ? ? ? B . n B 1 3 THR 3 2 ? ? ? B . n B 1 4 PRO 4 3 ? ? ? B . n B 1 5 LEU 5 4 ? ? ? B . n B 1 6 ASP 6 5 ? ? ? B . n B 1 7 ALA 7 6 ? ? ? B . n B 1 8 ASN 8 7 7 ASN ASN B . n B 1 9 VAL 9 8 8 VAL VAL B . n B 1 10 GLU 10 9 9 GLU GLU B . n B 1 11 LEU 11 10 10 LEU LEU B . n B 1 12 PRO 12 11 11 PRO PRO B . n B 1 13 THR 13 12 12 THR THR B . n B 1 14 GLU 14 13 13 GLU GLU B . n B 1 15 VAL 15 14 14 VAL VAL B . n B 1 16 LYS 16 15 15 LYS LYS B . n B 1 17 ALA 17 16 16 ALA ALA B . n B 1 18 MSE 18 17 17 MSE MSE B . n B 1 19 ILE 19 18 18 ILE ILE B . n B 1 20 GLU 20 19 19 GLU GLU B . n B 1 21 GLN 21 20 20 GLN GLN B . n B 1 22 SER 22 21 21 SER SER B . n B 1 23 SER 23 22 22 SER SER B . n B 1 24 ASP 24 23 23 ASP ASP B . n B 1 25 ALA 25 24 24 ALA ALA B . n B 1 26 GLN 26 25 25 GLN GLN B . n B 1 27 ALA 27 26 26 ALA ALA B . n B 1 28 ALA 28 27 27 ALA ALA B . n B 1 29 THR 29 28 28 THR THR B . n B 1 30 ALA 30 29 29 ALA ALA B . n B 1 31 LEU 31 30 30 LEU LEU B . n B 1 32 VAL 32 31 31 VAL VAL B . n B 1 33 ASN 33 32 32 ASN ASN B . n B 1 34 TYR 34 33 33 TYR TYR B . n B 1 35 VAL 35 34 34 VAL VAL B . n B 1 36 ILE 36 35 35 ILE ILE B . n B 1 37 LYS 37 36 36 LYS LYS B . n B 1 38 LEU 38 37 37 LEU LEU B . n B 1 39 ALA 39 38 38 ALA ALA B . n B 1 40 ALA 40 39 39 ALA ALA B . n B 1 41 ALA 41 40 40 ALA ALA B . n B 1 42 ALA 42 41 41 ALA ALA B . n B 1 43 GLU 43 42 42 GLU GLU B . n B 1 44 ILE 44 43 43 ILE ILE B . n B 1 45 HIS 45 44 44 HIS HIS B . n B 1 46 PHE 46 45 45 PHE PHE B . n B 1 47 THR 47 46 46 THR THR B . n B 1 48 ASP 48 47 47 ASP ASP B . n B 1 49 LEU 49 48 48 LEU LEU B . n B 1 50 GLN 50 49 49 GLN GLN B . n B 1 51 LEU 51 50 50 LEU LEU B . n B 1 52 GLN 52 51 51 GLN GLN B . n B 1 53 VAL 53 52 52 VAL VAL B . n B 1 54 LEU 54 53 53 LEU LEU B . n B 1 55 THR 55 54 54 THR THR B . n B 1 56 ASN 56 55 55 ASN ASN B . n B 1 57 HIS 57 56 56 HIS HIS B . n B 1 58 LEU 58 57 57 LEU LEU B . n B 1 59 ILE 59 58 58 ILE ILE B . n B 1 60 GLU 60 59 59 GLU GLU B . n B 1 61 MSE 61 60 60 MSE MSE B . n B 1 62 LEU 62 61 61 LEU LEU B . n B 1 63 GLY 63 62 62 GLY GLY B . n B 1 64 ARG 64 63 63 ARG ARG B . n B 1 65 SER 65 64 64 SER SER B . n B 1 66 LYS 66 65 65 LYS LYS B . n B 1 67 SER 67 66 66 SER SER B . n B 1 68 GLY 68 67 67 GLY GLY B . n B 1 69 GLU 69 68 68 GLU GLU B . n B 1 70 GLN 70 69 69 GLN GLN B . n B 1 71 LEU 71 70 70 LEU LEU B . n B 1 72 PRO 72 71 71 PRO PRO B . n B 1 73 ALA 73 72 72 ALA ALA B . n B 1 74 VAL 74 73 73 VAL VAL B . n B 1 75 ASP 75 74 74 ASP ASP B . n B 1 76 PRO 76 75 75 PRO PRO B . n B 1 77 THR 77 76 76 THR THR B . n B 1 78 MSE 78 77 77 MSE MSE B . n B 1 79 PHE 79 78 78 PHE PHE B . n B 1 80 ALA 80 79 79 ALA ALA B . n B 1 81 GLU 81 80 80 GLU GLU B . n B 1 82 VAL 82 81 81 VAL VAL B . n B 1 83 SER 83 82 82 SER SER B . n B 1 84 GLN 84 83 83 GLN GLN B . n B 1 85 LYS 85 84 84 LYS LYS B . n B 1 86 SER 86 85 85 SER SER B . n B 1 87 LEU 87 86 86 LEU LEU B . n B 1 88 ASP 88 87 87 ASP ASP B . n B 1 89 LEU 89 88 88 LEU LEU B . n B 1 90 ALA 90 89 89 ALA ALA B . n B 1 91 ASP 91 90 90 ASP ASP B . n B 1 92 GLN 92 91 91 GLN GLN B . n B 1 93 VAL 93 92 92 VAL VAL B . n B 1 94 VAL 94 93 93 VAL VAL B . n B 1 95 GLN 95 94 94 GLN GLN B . n B 1 96 HIS 96 95 95 HIS HIS B . n B 1 97 ILE 97 96 96 ILE ILE B . n B 1 98 GLY 98 97 97 GLY GLY B . n B 1 99 HIS 99 98 98 HIS HIS B . n B 1 100 LEU 100 99 99 LEU LEU B . n B 1 101 GLU 101 100 100 GLU GLU B . n B 1 102 VAL 102 101 101 VAL VAL B . n B 1 103 ALA 103 102 102 ALA ALA B . n B 1 104 GLU 104 103 103 GLU GLU B . n B 1 105 LYS 105 104 104 LYS LYS B . n B 1 106 TYR 106 105 105 TYR TYR B . n B 1 107 VAL 107 106 106 VAL VAL B . n B 1 108 LEU 108 107 107 LEU LEU B . n B 1 109 SER 109 108 108 SER SER B . n B 1 110 ILE 110 109 109 ILE ILE B . n B 1 111 HIS 111 110 110 HIS HIS B . n B 1 112 PHE 112 111 111 PHE PHE B . n B 1 113 GLU 113 112 112 GLU GLU B . n B 1 114 ALA 114 113 113 ALA ALA B . n B 1 115 ALA 115 114 114 ALA ALA B . n B 1 116 GLN 116 115 115 GLN GLN B . n B 1 117 ASP 117 116 116 ASP ASP B . n B 1 118 LYS 118 117 117 LYS LYS B . n B 1 119 ILE 119 118 118 ILE ILE B . n # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO 1 302 302 EDO EDO A . D 2 EDO 1 303 303 EDO EDO A . E 2 EDO 1 305 305 EDO EDO A . F 2 EDO 1 307 307 EDO EDO A . G 2 EDO 1 308 308 EDO EDO A . H 3 PEG 1 309 309 PEG PEG A . I 4 SO4 1 301 301 SO4 SO4 B . J 2 EDO 1 304 304 EDO EDO B . K 2 EDO 1 306 306 EDO EDO B . L 5 PG4 1 310 310 PG4 PG4 B . M 6 HOH 1 311 311 HOH HOH A . M 6 HOH 2 312 312 HOH HOH A . M 6 HOH 3 313 313 HOH HOH A . M 6 HOH 4 314 314 HOH HOH A . M 6 HOH 5 315 315 HOH HOH A . M 6 HOH 6 317 317 HOH HOH A . M 6 HOH 7 318 318 HOH HOH A . M 6 HOH 8 320 320 HOH HOH A . M 6 HOH 9 322 322 HOH HOH A . M 6 HOH 10 323 323 HOH HOH A . M 6 HOH 11 326 326 HOH HOH A . M 6 HOH 12 328 328 HOH HOH A . M 6 HOH 13 329 329 HOH HOH A . M 6 HOH 14 330 330 HOH HOH A . M 6 HOH 15 333 333 HOH HOH A . M 6 HOH 16 335 335 HOH HOH A . M 6 HOH 17 336 336 HOH HOH A . M 6 HOH 18 340 340 HOH HOH A . M 6 HOH 19 341 341 HOH HOH A . M 6 HOH 20 344 344 HOH HOH A . M 6 HOH 21 345 345 HOH HOH A . M 6 HOH 22 348 348 HOH HOH A . M 6 HOH 23 349 349 HOH HOH A . M 6 HOH 24 351 351 HOH HOH A . M 6 HOH 25 357 357 HOH HOH A . M 6 HOH 26 358 358 HOH HOH A . M 6 HOH 27 359 359 HOH HOH A . M 6 HOH 28 361 361 HOH HOH A . M 6 HOH 29 362 362 HOH HOH A . M 6 HOH 30 366 366 HOH HOH A . M 6 HOH 31 367 367 HOH HOH A . M 6 HOH 32 368 368 HOH HOH A . M 6 HOH 33 370 370 HOH HOH A . M 6 HOH 34 371 371 HOH HOH A . M 6 HOH 35 372 372 HOH HOH A . M 6 HOH 36 375 375 HOH HOH A . M 6 HOH 37 376 376 HOH HOH A . M 6 HOH 38 377 377 HOH HOH A . M 6 HOH 39 379 379 HOH HOH A . M 6 HOH 40 381 381 HOH HOH A . M 6 HOH 41 382 382 HOH HOH A . M 6 HOH 42 386 386 HOH HOH A . M 6 HOH 43 387 387 HOH HOH A . M 6 HOH 44 388 388 HOH HOH A . M 6 HOH 45 389 389 HOH HOH A . M 6 HOH 46 390 390 HOH HOH A . M 6 HOH 47 391 391 HOH HOH A . M 6 HOH 48 396 396 HOH HOH A . M 6 HOH 49 397 397 HOH HOH A . M 6 HOH 50 400 400 HOH HOH A . M 6 HOH 51 401 401 HOH HOH A . M 6 HOH 52 404 404 HOH HOH A . M 6 HOH 53 405 405 HOH HOH A . M 6 HOH 54 407 407 HOH HOH A . M 6 HOH 55 413 413 HOH HOH A . M 6 HOH 56 416 416 HOH HOH A . M 6 HOH 57 417 417 HOH HOH A . M 6 HOH 58 420 420 HOH HOH A . M 6 HOH 59 423 423 HOH HOH A . M 6 HOH 60 424 424 HOH HOH A . M 6 HOH 61 425 425 HOH HOH A . M 6 HOH 62 426 426 HOH HOH A . M 6 HOH 63 428 428 HOH HOH A . M 6 HOH 64 430 430 HOH HOH A . M 6 HOH 65 431 431 HOH HOH A . M 6 HOH 66 432 432 HOH HOH A . M 6 HOH 67 435 435 HOH HOH A . M 6 HOH 68 437 437 HOH HOH A . M 6 HOH 69 439 439 HOH HOH A . M 6 HOH 70 441 441 HOH HOH A . M 6 HOH 71 442 442 HOH HOH A . M 6 HOH 72 446 446 HOH HOH A . M 6 HOH 73 449 449 HOH HOH A . M 6 HOH 74 454 454 HOH HOH A . M 6 HOH 75 455 455 HOH HOH A . M 6 HOH 76 456 456 HOH HOH A . M 6 HOH 77 459 459 HOH HOH A . M 6 HOH 78 460 460 HOH HOH A . M 6 HOH 79 461 461 HOH HOH A . M 6 HOH 80 466 466 HOH HOH A . M 6 HOH 81 467 467 HOH HOH A . M 6 HOH 82 468 468 HOH HOH A . M 6 HOH 83 469 469 HOH HOH A . M 6 HOH 84 474 474 HOH HOH A . M 6 HOH 85 475 475 HOH HOH A . M 6 HOH 86 477 477 HOH HOH A . M 6 HOH 87 479 479 HOH HOH A . M 6 HOH 88 480 480 HOH HOH A . M 6 HOH 89 483 483 HOH HOH A . M 6 HOH 90 485 485 HOH HOH A . M 6 HOH 91 488 488 HOH HOH A . M 6 HOH 92 491 491 HOH HOH A . M 6 HOH 93 495 495 HOH HOH A . M 6 HOH 94 497 497 HOH HOH A . M 6 HOH 95 498 498 HOH HOH A . M 6 HOH 96 500 500 HOH HOH A . M 6 HOH 97 501 501 HOH HOH A . M 6 HOH 98 502 502 HOH HOH A . M 6 HOH 99 503 503 HOH HOH A . M 6 HOH 100 504 504 HOH HOH A . M 6 HOH 101 505 505 HOH HOH A . M 6 HOH 102 507 507 HOH HOH A . M 6 HOH 103 513 513 HOH HOH A . M 6 HOH 104 514 514 HOH HOH A . M 6 HOH 105 515 515 HOH HOH A . M 6 HOH 106 519 519 HOH HOH A . M 6 HOH 107 520 520 HOH HOH A . M 6 HOH 108 521 521 HOH HOH A . M 6 HOH 109 522 522 HOH HOH A . M 6 HOH 110 523 523 HOH HOH A . M 6 HOH 111 524 524 HOH HOH A . M 6 HOH 112 528 528 HOH HOH A . M 6 HOH 113 529 529 HOH HOH A . M 6 HOH 114 530 530 HOH HOH A . M 6 HOH 115 535 535 HOH HOH A . M 6 HOH 116 536 536 HOH HOH A . M 6 HOH 117 537 537 HOH HOH A . M 6 HOH 118 539 539 HOH HOH A . M 6 HOH 119 540 540 HOH HOH A . M 6 HOH 120 541 541 HOH HOH A . M 6 HOH 121 542 542 HOH HOH A . M 6 HOH 122 543 543 HOH HOH A . M 6 HOH 123 544 544 HOH HOH A . M 6 HOH 124 545 545 HOH HOH A . M 6 HOH 125 546 546 HOH HOH A . M 6 HOH 126 550 550 HOH HOH A . M 6 HOH 127 553 553 HOH HOH A . M 6 HOH 128 555 555 HOH HOH A . M 6 HOH 129 556 556 HOH HOH A . M 6 HOH 130 557 557 HOH HOH A . M 6 HOH 131 563 563 HOH HOH A . M 6 HOH 132 564 564 HOH HOH A . M 6 HOH 133 572 572 HOH HOH A . M 6 HOH 134 574 574 HOH HOH A . M 6 HOH 135 575 575 HOH HOH A . M 6 HOH 136 576 576 HOH HOH A . M 6 HOH 137 579 579 HOH HOH A . M 6 HOH 138 580 580 HOH HOH A . M 6 HOH 139 583 583 HOH HOH A . M 6 HOH 140 589 589 HOH HOH A . M 6 HOH 141 591 591 HOH HOH A . M 6 HOH 142 592 592 HOH HOH A . M 6 HOH 143 593 593 HOH HOH A . M 6 HOH 144 596 596 HOH HOH A . M 6 HOH 145 597 597 HOH HOH A . M 6 HOH 146 599 599 HOH HOH A . M 6 HOH 147 600 600 HOH HOH A . M 6 HOH 148 601 601 HOH HOH A . M 6 HOH 149 602 602 HOH HOH A . M 6 HOH 150 604 604 HOH HOH A . M 6 HOH 151 605 605 HOH HOH A . M 6 HOH 152 606 606 HOH HOH A . M 6 HOH 153 607 607 HOH HOH A . M 6 HOH 154 611 611 HOH HOH A . M 6 HOH 155 614 614 HOH HOH A . M 6 HOH 156 616 616 HOH HOH A . M 6 HOH 157 620 620 HOH HOH A . M 6 HOH 158 622 622 HOH HOH A . M 6 HOH 159 623 623 HOH HOH A . M 6 HOH 160 625 625 HOH HOH A . M 6 HOH 161 626 626 HOH HOH A . N 6 HOH 1 316 316 HOH HOH B . N 6 HOH 2 319 319 HOH HOH B . N 6 HOH 3 321 321 HOH HOH B . N 6 HOH 4 324 324 HOH HOH B . N 6 HOH 5 325 325 HOH HOH B . N 6 HOH 6 327 327 HOH HOH B . N 6 HOH 7 331 331 HOH HOH B . N 6 HOH 8 332 332 HOH HOH B . N 6 HOH 9 334 334 HOH HOH B . N 6 HOH 10 337 337 HOH HOH B . N 6 HOH 11 338 338 HOH HOH B . N 6 HOH 12 339 339 HOH HOH B . N 6 HOH 13 342 342 HOH HOH B . N 6 HOH 14 343 343 HOH HOH B . N 6 HOH 15 346 346 HOH HOH B . N 6 HOH 16 347 347 HOH HOH B . N 6 HOH 17 350 350 HOH HOH B . N 6 HOH 18 352 352 HOH HOH B . N 6 HOH 19 353 353 HOH HOH B . N 6 HOH 20 354 354 HOH HOH B . N 6 HOH 21 355 355 HOH HOH B . N 6 HOH 22 356 356 HOH HOH B . N 6 HOH 23 360 360 HOH HOH B . N 6 HOH 24 363 363 HOH HOH B . N 6 HOH 25 364 364 HOH HOH B . N 6 HOH 26 365 365 HOH HOH B . N 6 HOH 27 369 369 HOH HOH B . N 6 HOH 28 373 373 HOH HOH B . N 6 HOH 29 374 374 HOH HOH B . N 6 HOH 30 378 378 HOH HOH B . N 6 HOH 31 380 380 HOH HOH B . N 6 HOH 32 383 383 HOH HOH B . N 6 HOH 33 384 384 HOH HOH B . N 6 HOH 34 385 385 HOH HOH B . N 6 HOH 35 392 392 HOH HOH B . N 6 HOH 36 393 393 HOH HOH B . N 6 HOH 37 394 394 HOH HOH B . N 6 HOH 38 395 395 HOH HOH B . N 6 HOH 39 398 398 HOH HOH B . N 6 HOH 40 399 399 HOH HOH B . N 6 HOH 41 402 402 HOH HOH B . N 6 HOH 42 403 403 HOH HOH B . N 6 HOH 43 406 406 HOH HOH B . N 6 HOH 44 408 408 HOH HOH B . N 6 HOH 45 409 409 HOH HOH B . N 6 HOH 46 410 410 HOH HOH B . N 6 HOH 47 411 411 HOH HOH B . N 6 HOH 48 412 412 HOH HOH B . N 6 HOH 49 414 414 HOH HOH B . N 6 HOH 50 415 415 HOH HOH B . N 6 HOH 51 418 418 HOH HOH B . N 6 HOH 52 419 419 HOH HOH B . N 6 HOH 53 421 421 HOH HOH B . N 6 HOH 54 422 422 HOH HOH B . N 6 HOH 55 427 427 HOH HOH B . N 6 HOH 56 429 429 HOH HOH B . N 6 HOH 57 433 433 HOH HOH B . N 6 HOH 58 434 434 HOH HOH B . N 6 HOH 59 436 436 HOH HOH B . N 6 HOH 60 438 438 HOH HOH B . N 6 HOH 61 440 440 HOH HOH B . N 6 HOH 62 443 443 HOH HOH B . N 6 HOH 63 444 444 HOH HOH B . N 6 HOH 64 445 445 HOH HOH B . N 6 HOH 65 447 447 HOH HOH B . N 6 HOH 66 448 448 HOH HOH B . N 6 HOH 67 450 450 HOH HOH B . N 6 HOH 68 451 451 HOH HOH B . N 6 HOH 69 452 452 HOH HOH B . N 6 HOH 70 453 453 HOH HOH B . N 6 HOH 71 457 457 HOH HOH B . N 6 HOH 72 458 458 HOH HOH B . N 6 HOH 73 462 462 HOH HOH B . N 6 HOH 74 463 463 HOH HOH B . N 6 HOH 75 464 464 HOH HOH B . N 6 HOH 76 465 465 HOH HOH B . N 6 HOH 77 470 470 HOH HOH B . N 6 HOH 78 471 471 HOH HOH B . N 6 HOH 79 472 472 HOH HOH B . N 6 HOH 80 473 473 HOH HOH B . N 6 HOH 81 476 476 HOH HOH B . N 6 HOH 82 478 478 HOH HOH B . N 6 HOH 83 481 481 HOH HOH B . N 6 HOH 84 482 482 HOH HOH B . N 6 HOH 85 484 484 HOH HOH B . N 6 HOH 86 486 486 HOH HOH B . N 6 HOH 87 487 487 HOH HOH B . N 6 HOH 88 489 489 HOH HOH B . N 6 HOH 89 490 490 HOH HOH B . N 6 HOH 90 492 492 HOH HOH B . N 6 HOH 91 493 493 HOH HOH B . N 6 HOH 92 494 494 HOH HOH B . N 6 HOH 93 496 496 HOH HOH B . N 6 HOH 94 499 499 HOH HOH B . N 6 HOH 95 506 506 HOH HOH B . N 6 HOH 96 508 508 HOH HOH B . N 6 HOH 97 509 509 HOH HOH B . N 6 HOH 98 510 510 HOH HOH B . N 6 HOH 99 511 511 HOH HOH B . N 6 HOH 100 512 512 HOH HOH B . N 6 HOH 101 516 516 HOH HOH B . N 6 HOH 102 517 517 HOH HOH B . N 6 HOH 103 518 518 HOH HOH B . N 6 HOH 104 525 525 HOH HOH B . N 6 HOH 105 526 526 HOH HOH B . N 6 HOH 106 527 527 HOH HOH B . N 6 HOH 107 531 531 HOH HOH B . N 6 HOH 108 532 532 HOH HOH B . N 6 HOH 109 533 533 HOH HOH B . N 6 HOH 110 534 534 HOH HOH B . N 6 HOH 111 538 538 HOH HOH B . N 6 HOH 112 547 547 HOH HOH B . N 6 HOH 113 548 548 HOH HOH B . N 6 HOH 114 549 549 HOH HOH B . N 6 HOH 115 551 551 HOH HOH B . N 6 HOH 116 552 552 HOH HOH B . N 6 HOH 117 554 554 HOH HOH B . N 6 HOH 118 558 558 HOH HOH B . N 6 HOH 119 559 559 HOH HOH B . N 6 HOH 120 560 560 HOH HOH B . N 6 HOH 121 561 561 HOH HOH B . N 6 HOH 122 562 562 HOH HOH B . N 6 HOH 123 565 565 HOH HOH B . N 6 HOH 124 566 566 HOH HOH B . N 6 HOH 125 567 567 HOH HOH B . N 6 HOH 126 568 568 HOH HOH B . N 6 HOH 127 569 569 HOH HOH B . N 6 HOH 128 570 570 HOH HOH B . N 6 HOH 129 571 571 HOH HOH B . N 6 HOH 130 573 573 HOH HOH B . N 6 HOH 131 577 577 HOH HOH B . N 6 HOH 132 578 578 HOH HOH B . N 6 HOH 133 581 581 HOH HOH B . N 6 HOH 134 582 582 HOH HOH B . N 6 HOH 135 584 584 HOH HOH B . N 6 HOH 136 585 585 HOH HOH B . N 6 HOH 137 586 586 HOH HOH B . N 6 HOH 138 587 587 HOH HOH B . N 6 HOH 139 588 588 HOH HOH B . N 6 HOH 140 590 590 HOH HOH B . N 6 HOH 141 594 594 HOH HOH B . N 6 HOH 142 595 595 HOH HOH B . N 6 HOH 143 598 598 HOH HOH B . N 6 HOH 144 603 603 HOH HOH B . N 6 HOH 145 608 608 HOH HOH B . N 6 HOH 146 609 609 HOH HOH B . N 6 HOH 147 610 610 HOH HOH B . N 6 HOH 148 612 612 HOH HOH B . N 6 HOH 149 613 613 HOH HOH B . N 6 HOH 150 615 615 HOH HOH B . N 6 HOH 151 617 617 HOH HOH B . N 6 HOH 152 618 618 HOH HOH B . N 6 HOH 153 619 619 HOH HOH B . N 6 HOH 154 621 621 HOH HOH B . N 6 HOH 155 624 624 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 18 A MSE 17 ? MET SELENOMETHIONINE 3 A MSE 61 A MSE 60 ? MET SELENOMETHIONINE 4 A MSE 78 A MSE 77 ? MET SELENOMETHIONINE 5 B MSE 18 B MSE 17 ? MET SELENOMETHIONINE 6 B MSE 61 B MSE 60 ? MET SELENOMETHIONINE 7 B MSE 78 B MSE 77 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 3 author_defined_assembly ? dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,F,G,H,M 2 1 B,I,J,K,L,N 3 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-09-08 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2011-07-20 4 'Structure model' 1 3 2017-10-25 5 'Structure model' 1 4 2019-07-17 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Structure summary' 3 4 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_struct_assembly_auth_evidence 2 4 'Structure model' software 3 5 'Structure model' software 4 5 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_software.classification' 2 5 'Structure model' '_software.contact_author' 3 5 'Structure model' '_software.contact_author_email' 4 5 'Structure model' '_software.language' 5 5 'Structure model' '_software.location' 6 5 'Structure model' '_software.name' 7 5 'Structure model' '_software.type' 8 5 'Structure model' '_software.version' 9 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 14.4520 29.6430 16.0466 0.0070 0.0476 0.0068 0.0187 0.0018 0.0040 0.3211 0.2019 0.3123 0.1552 -0.1255 -0.1348 -0.0012 -0.0003 0.0015 -0.0189 0.0496 0.0302 0.0037 0.0460 0.1128 'X-RAY DIFFRACTION' 2 ? refined 19.3825 6.1214 17.5185 0.0200 0.0180 0.0154 0.0139 -0.0080 -0.0040 0.4164 0.1824 0.2163 -0.0581 -0.0467 0.1756 -0.0306 -0.0024 0.0330 -0.0049 -0.0583 -0.0004 -0.0032 -0.0483 -0.0253 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 118 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 B 7 B 118 ? . . . . ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.5.0110 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? 7 SHELXD . ? ? ? ? phasing ? ? ? 8 autoSHARP . ? ? ? ? phasing ? ? ? 9 # _pdbx_entry_details.entry_id 3NUF _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 6 ? ? -171.35 148.61 2 1 ASP A 23 ? A -162.01 91.77 3 1 ASP B 23 ? ? -158.73 75.97 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASN 7 ? CG ? A ASN 8 CG 2 1 Y 1 A ASN 7 ? OD1 ? A ASN 8 OD1 3 1 Y 1 A ASN 7 ? ND2 ? A ASN 8 ND2 4 1 Y 1 A LYS 117 ? NZ ? A LYS 118 NZ 5 1 Y 1 B ASN 7 ? CG ? B ASN 8 CG 6 1 Y 1 B ASN 7 ? OD1 ? B ASN 8 OD1 7 1 Y 1 B ASN 7 ? ND2 ? B ASN 8 ND2 8 1 Y 1 B VAL 8 ? CG1 ? B VAL 9 CG1 9 1 Y 1 B VAL 8 ? CG2 ? B VAL 9 CG2 10 1 Y 1 B GLU 9 ? CD ? B GLU 10 CD 11 1 Y 1 B GLU 9 ? OE1 ? B GLU 10 OE1 12 1 Y 1 B GLU 9 ? OE2 ? B GLU 10 OE2 13 1 Y 1 B LYS 15 ? NZ ? B LYS 16 NZ 14 1 Y 1 B GLN 20 ? OE1 ? B GLN 21 OE1 15 1 Y 1 B GLN 20 ? NE2 ? B GLN 21 NE2 16 1 Y 1 B LYS 36 ? CE ? B LYS 37 CE 17 1 Y 1 B LYS 36 ? NZ ? B LYS 37 NZ 18 1 Y 1 B GLU 80 ? OE1 ? B GLU 81 OE1 19 1 Y 1 B GLU 80 ? OE2 ? B GLU 81 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 B GLY 0 ? B GLY 1 3 1 Y 1 B MSE 1 ? B MSE 2 4 1 Y 1 B THR 2 ? B THR 3 5 1 Y 1 B PRO 3 ? B PRO 4 6 1 Y 1 B LEU 4 ? B LEU 5 7 1 Y 1 B ASP 5 ? B ASP 6 8 1 Y 1 B ALA 6 ? B ALA 7 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 'DI(HYDROXYETHYL)ETHER' PEG 4 'SULFATE ION' SO4 5 'TETRAETHYLENE GLYCOL' PG4 6 water HOH # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'gel filtration' ? 2 1 'light scattering' ? 3 2 'gel filtration' ? 4 2 'light scattering' ? #