HEADER SIGNALING PROTEIN 08-JUL-10 3NVR TITLE MODULATING HEME REDOX POTENTIAL THROUGH PROTEIN-INDUCED PORPHYRIN TITLE 2 DISTORTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: METHYL-ACCEPTING CHEMOTAXIS PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: N-TERMINAL DONAIM; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOANAEROBACTER TENGCONGENSIS; SOURCE 3 ORGANISM_TAXID: 119072; SOURCE 4 GENE: TAR4, TTE0680; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS H-NOX, HEMOPROTEIN, HEME COFACTOR, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.OLEA JR.,J.KURIYAN,M.A.MARLETTA REVDAT 3 21-FEB-24 3NVR 1 REMARK SEQADV LINK REVDAT 2 06-OCT-10 3NVR 1 JRNL REVDAT 1 08-SEP-10 3NVR 0 JRNL AUTH C.OLEA,J.KURIYAN,M.A.MARLETTA JRNL TITL MODULATING HEME REDOX POTENTIAL THROUGH PROTEIN-INDUCED JRNL TITL 2 PORPHYRIN DISTORTION JRNL REF J.AM.CHEM.SOC. V. 132 12794 2010 JRNL REFN ISSN 0002-7863 JRNL PMID 20735135 JRNL DOI 10.1021/JA106252B REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.48 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 23163 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 1229 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.4896 - 4.4667 0.98 2698 128 0.2011 0.2161 REMARK 3 2 4.4667 - 3.5456 0.99 2564 143 0.1935 0.2362 REMARK 3 3 3.5456 - 3.0975 1.00 2556 147 0.2271 0.2995 REMARK 3 4 3.0975 - 2.8143 1.00 2554 134 0.2315 0.2638 REMARK 3 5 2.8143 - 2.6126 1.00 2549 137 0.2328 0.2826 REMARK 3 6 2.6126 - 2.4586 1.00 2500 143 0.2332 0.2810 REMARK 3 7 2.4586 - 2.3355 1.00 2517 131 0.2336 0.2880 REMARK 3 8 2.3355 - 2.2338 1.00 2510 148 0.2447 0.3125 REMARK 3 9 2.2338 - 2.1478 0.97 2447 118 0.2690 0.3271 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 50.03 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -8.15960 REMARK 3 B22 (A**2) : 5.70810 REMARK 3 B33 (A**2) : 2.45160 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3095 REMARK 3 ANGLE : 1.035 4182 REMARK 3 CHIRALITY : 0.074 432 REMARK 3 PLANARITY : 0.008 521 REMARK 3 DIHEDRAL : 18.349 1162 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 1:61) REMARK 3 ORIGIN FOR THE GROUP (A): -10.4685 19.9952 -14.5289 REMARK 3 T TENSOR REMARK 3 T11: 0.4217 T22: 0.6287 REMARK 3 T33: 0.3222 T12: 0.0180 REMARK 3 T13: 0.0745 T23: 0.0320 REMARK 3 L TENSOR REMARK 3 L11: 2.0675 L22: 5.2827 REMARK 3 L33: 0.4812 L12: -0.7866 REMARK 3 L13: -2.0042 L23: 0.0764 REMARK 3 S TENSOR REMARK 3 S11: 0.2126 S12: 0.9028 S13: 0.1123 REMARK 3 S21: -0.8525 S22: -0.3217 S23: -0.5326 REMARK 3 S31: -0.1852 S32: 0.2031 S33: 0.1391 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 62:160) REMARK 3 ORIGIN FOR THE GROUP (A): -24.6460 16.9555 -0.8644 REMARK 3 T TENSOR REMARK 3 T11: 0.3375 T22: 0.2832 REMARK 3 T33: 0.3486 T12: 0.0346 REMARK 3 T13: 0.0855 T23: -0.0186 REMARK 3 L TENSOR REMARK 3 L11: 2.5091 L22: 5.6586 REMARK 3 L33: 2.7661 L12: -0.8017 REMARK 3 L13: -1.3482 L23: -0.2736 REMARK 3 S TENSOR REMARK 3 S11: -0.3111 S12: -0.1604 S13: -0.3224 REMARK 3 S21: 0.5942 S22: 0.1941 S23: 0.7161 REMARK 3 S31: -0.1402 S32: -0.0065 S33: 0.1008 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 161:179) REMARK 3 ORIGIN FOR THE GROUP (A): -31.8707 6.8448 -3.2179 REMARK 3 T TENSOR REMARK 3 T11: 0.3089 T22: 0.2790 REMARK 3 T33: 0.8409 T12: -0.0103 REMARK 3 T13: 0.2512 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 0.8902 L22: 7.9726 REMARK 3 L33: 3.2911 L12: -3.2449 REMARK 3 L13: 0.2393 L23: -2.9158 REMARK 3 S TENSOR REMARK 3 S11: 0.4372 S12: 0.0108 S13: -0.8136 REMARK 3 S21: -0.2377 S22: 0.0787 S23: 2.3502 REMARK 3 S31: 0.5531 S32: -0.0037 S33: -0.1408 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 180) REMARK 3 ORIGIN FOR THE GROUP (A): -28.3963 10.7428 18.3199 REMARK 3 T TENSOR REMARK 3 T11: 4.8501 T22: 0.9132 REMARK 3 T33: 1.1757 T12: -1.6536 REMARK 3 T13: 1.7091 T23: -0.8255 REMARK 3 L TENSOR REMARK 3 L11: 1.9996 L22: 2.0004 REMARK 3 L33: 2.1366 L12: 2.0000 REMARK 3 L13: 2.0001 L23: 2.0000 REMARK 3 S TENSOR REMARK 3 S11: 0.7211 S12: -0.2474 S13: 2.6663 REMARK 3 S21: 0.6157 S22: -0.7134 S23: -2.1801 REMARK 3 S31: -1.4299 S32: -3.0063 S33: 0.0289 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN B AND RESID 1:79) REMARK 3 ORIGIN FOR THE GROUP (A): 8.9608 16.6844 0.6712 REMARK 3 T TENSOR REMARK 3 T11: 0.3181 T22: 0.3258 REMARK 3 T33: 0.4507 T12: -0.0205 REMARK 3 T13: 0.0146 T23: 0.0268 REMARK 3 L TENSOR REMARK 3 L11: 2.0919 L22: 3.5788 REMARK 3 L33: 3.5991 L12: -0.8642 REMARK 3 L13: -0.6270 L23: 0.3332 REMARK 3 S TENSOR REMARK 3 S11: 0.0106 S12: -0.0786 S13: -0.2636 REMARK 3 S21: 0.3572 S22: -0.0027 S23: -0.0202 REMARK 3 S31: 0.1080 S32: -0.1803 S33: -0.0065 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN B AND RESID 80:108) REMARK 3 ORIGIN FOR THE GROUP (A): 23.5441 24.8219 -12.3123 REMARK 3 T TENSOR REMARK 3 T11: 0.4852 T22: 0.3179 REMARK 3 T33: 0.6137 T12: 0.1249 REMARK 3 T13: 0.1721 T23: 0.1506 REMARK 3 L TENSOR REMARK 3 L11: 1.2527 L22: 1.7492 REMARK 3 L33: 0.4401 L12: 0.5775 REMARK 3 L13: -0.1480 L23: -1.3228 REMARK 3 S TENSOR REMARK 3 S11: 0.4125 S12: -0.0040 S13: 1.2692 REMARK 3 S21: -0.1059 S22: -0.2991 S23: -0.8023 REMARK 3 S31: -0.7462 S32: -0.0046 S33: -0.0789 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN B AND RESID 109:176) REMARK 3 ORIGIN FOR THE GROUP (A): 25.7551 10.8869 -10.6869 REMARK 3 T TENSOR REMARK 3 T11: 0.3430 T22: 0.3610 REMARK 3 T33: 0.4081 T12: 0.0653 REMARK 3 T13: 0.0531 T23: 0.0276 REMARK 3 L TENSOR REMARK 3 L11: 3.1302 L22: 7.9708 REMARK 3 L33: -0.6418 L12: -3.2116 REMARK 3 L13: -0.1917 L23: -0.2237 REMARK 3 S TENSOR REMARK 3 S11: 0.2899 S12: 0.0011 S13: -0.2137 REMARK 3 S21: -0.5432 S22: -0.5175 S23: -0.2882 REMARK 3 S31: 0.2074 S32: 0.0124 S33: 0.2732 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN B AND RESID 177:178) REMARK 3 ORIGIN FOR THE GROUP (A): 24.3860 10.6837 -24.5777 REMARK 3 T TENSOR REMARK 3 T11: 1.5024 T22: 1.2264 REMARK 3 T33: 0.9973 T12: 0.5107 REMARK 3 T13: 0.1187 T23: -0.1724 REMARK 3 L TENSOR REMARK 3 L11: -1.1884 L22: 1.9999 REMARK 3 L33: 0.1273 L12: 6.4533 REMARK 3 L13: -2.2697 L23: 5.6248 REMARK 3 S TENSOR REMARK 3 S11: -0.3089 S12: 1.2466 S13: -0.1875 REMARK 3 S21: -2.6166 S22: -0.3750 S23: -0.2253 REMARK 3 S31: 0.8007 S32: 0.4172 S33: 0.5346 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3NVR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JUL-10. REMARK 100 THE DEPOSITION ID IS D_1000060339. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-NOV-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : KOHZU REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24124 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06000 REMARK 200 FOR THE DATA SET : 24.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.23 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.750 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 26% PEG 4000, 0.05 M MES PH 6, 0.1 M REMARK 280 LICL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 39.91250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 63.04750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.91250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 63.04750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4290 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -79.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 181 REMARK 465 VAL A 182 REMARK 465 PHE A 183 REMARK 465 GLU A 184 REMARK 465 TYR A 185 REMARK 465 LYS A 186 REMARK 465 LYS A 187 REMARK 465 ASN A 188 REMARK 465 LYS B 179 REMARK 465 ASN B 180 REMARK 465 PRO B 181 REMARK 465 VAL B 182 REMARK 465 PHE B 183 REMARK 465 GLU B 184 REMARK 465 TYR B 185 REMARK 465 LYS B 186 REMARK 465 LYS B 187 REMARK 465 ASN B 188 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 177 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 110 -70.66 -58.46 REMARK 500 MET A 137 56.81 -100.26 REMARK 500 LYS A 166 87.74 -167.82 REMARK 500 LEU B 117 37.82 -141.67 REMARK 500 SER B 133 148.13 -170.17 REMARK 500 MET B 137 56.33 -100.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 200 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 102 NE2 REMARK 620 2 HEM A 200 NA 94.1 REMARK 620 3 HEM A 200 NB 89.8 92.5 REMARK 620 4 HEM A 200 NC 86.7 177.7 85.4 REMARK 620 5 HEM A 200 ND 87.9 87.3 177.7 94.9 REMARK 620 6 OXY A 493 O1 168.3 97.7 89.9 81.6 92.4 REMARK 620 7 OXY A 493 O2 158.1 67.7 102.6 112.1 79.5 32.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 200 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 102 NE2 REMARK 620 2 HEM B 200 NA 90.5 REMARK 620 3 HEM B 200 NB 84.9 92.5 REMARK 620 4 HEM B 200 NC 87.6 177.9 86.5 REMARK 620 5 HEM B 200 ND 89.4 89.3 174.0 91.6 REMARK 620 6 OXY B 494 O1 170.5 98.9 93.3 83.0 92.1 REMARK 620 7 OXY B 494 O2 157.2 70.8 108.1 111.3 77.9 31.6 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OXY A 493 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 189 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM B 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OXY B 494 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1U55 RELATED DB: PDB REMARK 900 RELATED ID: 3NVU RELATED DB: PDB DBREF 3NVR A 1 188 UNP Q8RBX6 Q8RBX6_THETN 1 188 DBREF 3NVR B 1 188 UNP Q8RBX6 Q8RBX6_THETN 1 188 SEQADV 3NVR LEU A 5 UNP Q8RBX6 ILE 5 ENGINEERED MUTATION SEQADV 3NVR LEU B 5 UNP Q8RBX6 ILE 5 ENGINEERED MUTATION SEQRES 1 A 188 MET LYS GLY THR LEU VAL GLY THR TRP ILE LYS THR LEU SEQRES 2 A 188 ARG ASP LEU TYR GLY ASN ASP VAL VAL ASP GLU SER LEU SEQRES 3 A 188 LYS SER VAL GLY TRP GLU PRO ASP ARG VAL ILE THR PRO SEQRES 4 A 188 LEU GLU ASP ILE ASP ASP ASP GLU VAL ARG ARG ILE PHE SEQRES 5 A 188 ALA LYS VAL SER GLU LYS THR GLY LYS ASN VAL ASN GLU SEQRES 6 A 188 ILE TRP ARG GLU VAL GLY ARG GLN ASN ILE LYS THR PHE SEQRES 7 A 188 SER GLU TRP PHE PRO SER TYR PHE ALA GLY ARG ARG LEU SEQRES 8 A 188 VAL ASN PHE LEU MET MET MET ASP GLU VAL HIS LEU GLN SEQRES 9 A 188 LEU THR LYS MET ILE LYS GLY ALA THR PRO PRO ARG LEU SEQRES 10 A 188 ILE ALA LYS PRO VAL ALA LYS ASP ALA ILE GLU MET GLU SEQRES 11 A 188 TYR VAL SER LYS ARG LYS MET TYR ASP TYR PHE LEU GLY SEQRES 12 A 188 LEU ILE GLU GLY SER SER LYS PHE PHE LYS GLU GLU ILE SEQRES 13 A 188 SER VAL GLU GLU VAL GLU ARG GLY GLU LYS ASP GLY PHE SEQRES 14 A 188 SER ARG LEU LYS VAL ARG ILE LYS PHE LYS ASN PRO VAL SEQRES 15 A 188 PHE GLU TYR LYS LYS ASN SEQRES 1 B 188 MET LYS GLY THR LEU VAL GLY THR TRP ILE LYS THR LEU SEQRES 2 B 188 ARG ASP LEU TYR GLY ASN ASP VAL VAL ASP GLU SER LEU SEQRES 3 B 188 LYS SER VAL GLY TRP GLU PRO ASP ARG VAL ILE THR PRO SEQRES 4 B 188 LEU GLU ASP ILE ASP ASP ASP GLU VAL ARG ARG ILE PHE SEQRES 5 B 188 ALA LYS VAL SER GLU LYS THR GLY LYS ASN VAL ASN GLU SEQRES 6 B 188 ILE TRP ARG GLU VAL GLY ARG GLN ASN ILE LYS THR PHE SEQRES 7 B 188 SER GLU TRP PHE PRO SER TYR PHE ALA GLY ARG ARG LEU SEQRES 8 B 188 VAL ASN PHE LEU MET MET MET ASP GLU VAL HIS LEU GLN SEQRES 9 B 188 LEU THR LYS MET ILE LYS GLY ALA THR PRO PRO ARG LEU SEQRES 10 B 188 ILE ALA LYS PRO VAL ALA LYS ASP ALA ILE GLU MET GLU SEQRES 11 B 188 TYR VAL SER LYS ARG LYS MET TYR ASP TYR PHE LEU GLY SEQRES 12 B 188 LEU ILE GLU GLY SER SER LYS PHE PHE LYS GLU GLU ILE SEQRES 13 B 188 SER VAL GLU GLU VAL GLU ARG GLY GLU LYS ASP GLY PHE SEQRES 14 B 188 SER ARG LEU LYS VAL ARG ILE LYS PHE LYS ASN PRO VAL SEQRES 15 B 188 PHE GLU TYR LYS LYS ASN HET HEM A 200 43 HET OXY A 493 2 HET CL A 189 1 HET HEM B 200 43 HET OXY B 494 2 HET CL B 189 1 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM OXY OXYGEN MOLECULE HETNAM CL CHLORIDE ION HETSYN HEM HEME FORMUL 3 HEM 2(C34 H32 FE N4 O4) FORMUL 4 OXY 2(O2) FORMUL 5 CL 2(CL 1-) FORMUL 9 HOH *55(H2 O) HELIX 1 1 LYS A 2 GLY A 18 1 17 HELIX 2 2 GLY A 18 SER A 28 1 11 HELIX 3 3 ASP A 44 GLY A 60 1 17 HELIX 4 4 ASN A 62 PHE A 82 1 21 HELIX 5 5 PRO A 83 PHE A 86 5 4 HELIX 6 6 ARG A 90 LYS A 107 1 18 HELIX 7 7 MET A 137 PHE A 152 1 16 HELIX 8 8 LYS B 2 GLY B 18 1 17 HELIX 9 9 GLY B 18 VAL B 29 1 12 HELIX 10 10 ASP B 44 GLY B 60 1 17 HELIX 11 11 ASN B 62 PHE B 82 1 21 HELIX 12 12 PRO B 83 PHE B 86 5 4 HELIX 13 13 ARG B 90 LEU B 105 1 16 HELIX 14 14 MET B 137 LYS B 153 1 17 SHEET 1 A 4 ALA A 119 ALA A 123 0 SHEET 2 A 4 ALA A 126 SER A 133 -1 O GLU A 128 N LYS A 120 SHEET 3 A 4 SER A 170 PHE A 178 -1 O ILE A 176 N ILE A 127 SHEET 4 A 4 ILE A 156 GLU A 165 -1 N GLU A 159 O ARG A 175 SHEET 1 B 4 ARG B 116 ALA B 123 0 SHEET 2 B 4 ALA B 126 SER B 133 -1 O VAL B 132 N ARG B 116 SHEET 3 B 4 PHE B 169 LYS B 177 -1 O LEU B 172 N TYR B 131 SHEET 4 B 4 SER B 157 LYS B 166 -1 N GLU B 159 O ARG B 175 LINK NE2 HIS A 102 FE HEM A 200 1555 1555 2.17 LINK FE HEM A 200 O1 OXY A 493 1555 1555 2.28 LINK FE HEM A 200 O2 OXY A 493 1555 1555 2.63 LINK NE2 HIS B 102 FE HEM B 200 1555 1555 2.14 LINK FE HEM B 200 O1 OXY B 494 1555 1555 2.22 LINK FE HEM B 200 O2 OXY B 494 1555 1555 2.68 CISPEP 1 LYS A 166 ASP A 167 0 -20.48 CISPEP 2 LYS B 110 GLY B 111 0 5.22 SITE 1 AC1 22 MET A 1 LYS A 2 LEU A 5 PHE A 78 SITE 2 AC1 22 TYR A 85 PHE A 94 MET A 98 HIS A 102 SITE 3 AC1 22 LEU A 105 THR A 113 PRO A 114 TYR A 131 SITE 4 AC1 22 SER A 133 ARG A 135 MET A 137 TYR A 140 SITE 5 AC1 22 PHE A 141 LEU A 144 ILE A 145 HOH A 205 SITE 6 AC1 22 HOH A 211 OXY A 493 SITE 1 AC2 5 LEU A 5 PHE A 78 TYR A 140 LEU A 144 SITE 2 AC2 5 HEM A 200 SITE 1 AC3 1 MET A 137 SITE 1 AC4 21 LYS B 2 PHE B 78 TYR B 85 PHE B 86 SITE 2 AC4 21 PHE B 94 MET B 98 HIS B 102 LEU B 105 SITE 3 AC4 21 THR B 113 PRO B 114 PRO B 115 LEU B 117 SITE 4 AC4 21 TYR B 131 SER B 133 ARG B 135 MET B 137 SITE 5 AC4 21 TYR B 140 PHE B 141 LEU B 144 ILE B 145 SITE 6 AC4 21 OXY B 494 SITE 1 AC5 5 LEU B 5 PHE B 78 TYR B 140 LEU B 144 SITE 2 AC5 5 HEM B 200 CRYST1 79.825 126.095 42.742 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012527 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007931 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023396 0.00000