data_3NXS # _entry.id 3NXS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3NXS pdb_00003nxs 10.2210/pdb3nxs/pdb RCSB RCSB060412 ? ? WWPDB D_1000060412 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3MD0 ;Crystal structure of arginine/ornithine transport system ATPase from Mycobacterium tuberculosis bound to GDP (a RAS-like GTPase superfamily protein) ; unspecified TargetDB MysmA.00200.b . unspecified # _pdbx_database_status.entry_id 3NXS _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-07-14 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Seattle Structural Genomics Center for Infectious Disease (SSGCID)' _audit_author.pdbx_ordinal 1 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Crystal structures of Mycobacterial MeaB and MMAA-like GTPases' J.Struct.Funct.Genom. 16 91 99 2015 ? NE 1345-711X ? ? 25832174 10.1007/s10969-015-9197-2 1 'Increasing the structural coverage of tuberculosis drug targets' 'Tuberculosis (Edinb)' 95 142 148 2015 ? UK 1472-9792 ? ? 25613812 10.1016/j.tube.2014.12.003 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Edwards, T.E.' 1 ? primary 'Baugh, L.' 2 ? primary 'Bullen, J.' 3 ? primary 'Baydo, R.O.' 4 ? primary 'Witte, P.' 5 ? primary 'Thompkins, K.' 6 ? primary 'Phan, I.Q.' 7 ? primary 'Abendroth, J.' 8 ? primary 'Clifton, M.C.' 9 ? primary 'Sankaran, B.' 10 ? primary 'Van Voorhis, W.C.' 11 ? primary 'Myler, P.J.' 12 ? primary 'Staker, B.L.' 13 ? primary 'Grundner, C.' 14 ? primary 'Lorimer, D.D.' 15 ? 1 'Baugh, L.' 16 ? 1 'Phan, I.' 17 ? 1 'Begley, D.W.' 18 ? 1 'Clifton, M.C.' 19 ? 1 'Armour, B.' 20 ? 1 'Dranow, D.M.' 21 ? 1 'Taylor, B.M.' 22 ? 1 'Muruthi, M.M.' 23 ? 1 'Abendroth, J.' 24 ? 1 'Fairman, J.W.' 25 ? 1 'Fox, D.' 26 ? 1 'Dieterich, S.H.' 27 ? 1 'Staker, B.L.' 28 ? 1 'Gardberg, A.S.' 29 ? 1 'Choi, R.' 30 ? 1 'Hewitt, S.N.' 31 ? 1 'Napuli, A.J.' 32 ? 1 'Myers, J.' 33 ? 1 'Barrett, L.K.' 34 ? 1 'Zhang, Y.' 35 ? 1 'Ferrell, M.' 36 ? 1 'Mundt, E.' 37 ? 1 'Thompkins, K.' 38 ? 1 'Tran, N.' 39 ? 1 'Lyons-Abbott, S.' 40 ? 1 'Abramov, A.' 41 ? 1 'Sekar, A.' 42 ? 1 'Serbzhinskiy, D.' 43 ? 1 'Lorimer, D.' 44 ? 1 'Buchko, G.W.' 45 ? 1 'Stacy, R.' 46 ? 1 'Stewart, L.J.' 47 ? 1 'Edwards, T.E.' 48 ? 1 'Van Voorhis, W.C.' 49 ? 1 'Myler, P.J.' 50 ? # _cell.length_a 78.630 _cell.length_b 91.460 _cell.length_c 57.470 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3NXS _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.entry_id 3NXS _symmetry.Int_Tables_number 18 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'LAO/AO transport system ATPase' 35525.520 1 2.7.-.- ? ? ? 2 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 4 water nat water 18.015 90 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPGSMKAVNVHELAQSIRDGDRSALARAITLVESTRADHREQAQQLLLDLMPEAGSAMHVGITGVPGVGKSTTIEALGMH LIEAGHRVAVLAVDPSSTRTGGSILGDKTRMARLAVHPDAYIRPSPTSGTLGGVAKATRETIVLLEAAGYDVILVETVGV GQSEVTVAGMVDTFVFLTLARTGDQLQGIKKGVLELADVIVVNKADGEHAVEAKAAARELSGAIRLIYPRESLWRPPVLT MSAVEGTGLPELWETVLRHREVLEEAGEFEARRRTQQVEWTWSMVRDAVLDRVMNHPEVRRIRDDVEQRVRLGELTPALA AQEILDAAQ ; _entity_poly.pdbx_seq_one_letter_code_can ;GPGSMKAVNVHELAQSIRDGDRSALARAITLVESTRADHREQAQQLLLDLMPEAGSAMHVGITGVPGVGKSTTIEALGMH LIEAGHRVAVLAVDPSSTRTGGSILGDKTRMARLAVHPDAYIRPSPTSGTLGGVAKATRETIVLLEAAGYDVILVETVGV GQSEVTVAGMVDTFVFLTLARTGDQLQGIKKGVLELADVIVVNKADGEHAVEAKAAARELSGAIRLIYPRESLWRPPVLT MSAVEGTGLPELWETVLRHREVLEEAGEFEARRRTQQVEWTWSMVRDAVLDRVMNHPEVRRIRDDVEQRVRLGELTPALA AQEILDAAQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier MysmA.00200.b # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 GLY n 1 4 SER n 1 5 MET n 1 6 LYS n 1 7 ALA n 1 8 VAL n 1 9 ASN n 1 10 VAL n 1 11 HIS n 1 12 GLU n 1 13 LEU n 1 14 ALA n 1 15 GLN n 1 16 SER n 1 17 ILE n 1 18 ARG n 1 19 ASP n 1 20 GLY n 1 21 ASP n 1 22 ARG n 1 23 SER n 1 24 ALA n 1 25 LEU n 1 26 ALA n 1 27 ARG n 1 28 ALA n 1 29 ILE n 1 30 THR n 1 31 LEU n 1 32 VAL n 1 33 GLU n 1 34 SER n 1 35 THR n 1 36 ARG n 1 37 ALA n 1 38 ASP n 1 39 HIS n 1 40 ARG n 1 41 GLU n 1 42 GLN n 1 43 ALA n 1 44 GLN n 1 45 GLN n 1 46 LEU n 1 47 LEU n 1 48 LEU n 1 49 ASP n 1 50 LEU n 1 51 MET n 1 52 PRO n 1 53 GLU n 1 54 ALA n 1 55 GLY n 1 56 SER n 1 57 ALA n 1 58 MET n 1 59 HIS n 1 60 VAL n 1 61 GLY n 1 62 ILE n 1 63 THR n 1 64 GLY n 1 65 VAL n 1 66 PRO n 1 67 GLY n 1 68 VAL n 1 69 GLY n 1 70 LYS n 1 71 SER n 1 72 THR n 1 73 THR n 1 74 ILE n 1 75 GLU n 1 76 ALA n 1 77 LEU n 1 78 GLY n 1 79 MET n 1 80 HIS n 1 81 LEU n 1 82 ILE n 1 83 GLU n 1 84 ALA n 1 85 GLY n 1 86 HIS n 1 87 ARG n 1 88 VAL n 1 89 ALA n 1 90 VAL n 1 91 LEU n 1 92 ALA n 1 93 VAL n 1 94 ASP n 1 95 PRO n 1 96 SER n 1 97 SER n 1 98 THR n 1 99 ARG n 1 100 THR n 1 101 GLY n 1 102 GLY n 1 103 SER n 1 104 ILE n 1 105 LEU n 1 106 GLY n 1 107 ASP n 1 108 LYS n 1 109 THR n 1 110 ARG n 1 111 MET n 1 112 ALA n 1 113 ARG n 1 114 LEU n 1 115 ALA n 1 116 VAL n 1 117 HIS n 1 118 PRO n 1 119 ASP n 1 120 ALA n 1 121 TYR n 1 122 ILE n 1 123 ARG n 1 124 PRO n 1 125 SER n 1 126 PRO n 1 127 THR n 1 128 SER n 1 129 GLY n 1 130 THR n 1 131 LEU n 1 132 GLY n 1 133 GLY n 1 134 VAL n 1 135 ALA n 1 136 LYS n 1 137 ALA n 1 138 THR n 1 139 ARG n 1 140 GLU n 1 141 THR n 1 142 ILE n 1 143 VAL n 1 144 LEU n 1 145 LEU n 1 146 GLU n 1 147 ALA n 1 148 ALA n 1 149 GLY n 1 150 TYR n 1 151 ASP n 1 152 VAL n 1 153 ILE n 1 154 LEU n 1 155 VAL n 1 156 GLU n 1 157 THR n 1 158 VAL n 1 159 GLY n 1 160 VAL n 1 161 GLY n 1 162 GLN n 1 163 SER n 1 164 GLU n 1 165 VAL n 1 166 THR n 1 167 VAL n 1 168 ALA n 1 169 GLY n 1 170 MET n 1 171 VAL n 1 172 ASP n 1 173 THR n 1 174 PHE n 1 175 VAL n 1 176 PHE n 1 177 LEU n 1 178 THR n 1 179 LEU n 1 180 ALA n 1 181 ARG n 1 182 THR n 1 183 GLY n 1 184 ASP n 1 185 GLN n 1 186 LEU n 1 187 GLN n 1 188 GLY n 1 189 ILE n 1 190 LYS n 1 191 LYS n 1 192 GLY n 1 193 VAL n 1 194 LEU n 1 195 GLU n 1 196 LEU n 1 197 ALA n 1 198 ASP n 1 199 VAL n 1 200 ILE n 1 201 VAL n 1 202 VAL n 1 203 ASN n 1 204 LYS n 1 205 ALA n 1 206 ASP n 1 207 GLY n 1 208 GLU n 1 209 HIS n 1 210 ALA n 1 211 VAL n 1 212 GLU n 1 213 ALA n 1 214 LYS n 1 215 ALA n 1 216 ALA n 1 217 ALA n 1 218 ARG n 1 219 GLU n 1 220 LEU n 1 221 SER n 1 222 GLY n 1 223 ALA n 1 224 ILE n 1 225 ARG n 1 226 LEU n 1 227 ILE n 1 228 TYR n 1 229 PRO n 1 230 ARG n 1 231 GLU n 1 232 SER n 1 233 LEU n 1 234 TRP n 1 235 ARG n 1 236 PRO n 1 237 PRO n 1 238 VAL n 1 239 LEU n 1 240 THR n 1 241 MET n 1 242 SER n 1 243 ALA n 1 244 VAL n 1 245 GLU n 1 246 GLY n 1 247 THR n 1 248 GLY n 1 249 LEU n 1 250 PRO n 1 251 GLU n 1 252 LEU n 1 253 TRP n 1 254 GLU n 1 255 THR n 1 256 VAL n 1 257 LEU n 1 258 ARG n 1 259 HIS n 1 260 ARG n 1 261 GLU n 1 262 VAL n 1 263 LEU n 1 264 GLU n 1 265 GLU n 1 266 ALA n 1 267 GLY n 1 268 GLU n 1 269 PHE n 1 270 GLU n 1 271 ALA n 1 272 ARG n 1 273 ARG n 1 274 ARG n 1 275 THR n 1 276 GLN n 1 277 GLN n 1 278 VAL n 1 279 GLU n 1 280 TRP n 1 281 THR n 1 282 TRP n 1 283 SER n 1 284 MET n 1 285 VAL n 1 286 ARG n 1 287 ASP n 1 288 ALA n 1 289 VAL n 1 290 LEU n 1 291 ASP n 1 292 ARG n 1 293 VAL n 1 294 MET n 1 295 ASN n 1 296 HIS n 1 297 PRO n 1 298 GLU n 1 299 VAL n 1 300 ARG n 1 301 ARG n 1 302 ILE n 1 303 ARG n 1 304 ASP n 1 305 ASP n 1 306 VAL n 1 307 GLU n 1 308 GLN n 1 309 ARG n 1 310 VAL n 1 311 ARG n 1 312 LEU n 1 313 GLY n 1 314 GLU n 1 315 LEU n 1 316 THR n 1 317 PRO n 1 318 ALA n 1 319 LEU n 1 320 ALA n 1 321 ALA n 1 322 GLN n 1 323 GLU n 1 324 ILE n 1 325 LEU n 1 326 ASP n 1 327 ALA n 1 328 ALA n 1 329 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene MSMEG_3160 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 700084 / mc(2)155' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mycobacterium smegmatis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 246196 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type AVA0421 _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0QX37_MYCS2 _struct_ref.pdbx_db_accession A0QX37 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MKAVNVHELAQSIRDGDRSALARAITLVESTRADHREQAQQLLLDLMPEAGSAMHVGITGVPGVGKSTTIEALGMHLIEA GHRVAVLAVDPSSTRTGGSILGDKTRMARLAVHPDAYIRPSPTSGTLGGVAKATRETIVLLEAAGYDVILVETVGVGQSE VTVAGMVDTFVFLTLARTGDQLQGIKKGVLELADVIVVNKADGEHAVEAKAAARELSGAIRLIYPRESLWRPPVLTMSAV EGTGLPELWETVLRHREVLEEAGEFEARRRTQQVEWTWSMVRDAVLDRVMNHPEVRRIRDDVEQRVRLGELTPALAAQEI LDAAQ ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3NXS _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 329 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A0QX37 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 325 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 326 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3NXS GLY A 1 ? UNP A0QX37 ? ? 'expression tag' -2 1 1 3NXS PRO A 2 ? UNP A0QX37 ? ? 'expression tag' -1 2 1 3NXS GLY A 3 ? UNP A0QX37 ? ? 'expression tag' 0 3 1 3NXS SER A 4 ? UNP A0QX37 ? ? 'expression tag' 1 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3NXS _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.91 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 57.71 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 9.0 _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;JCSG+ condition F6, 0.1% Bicine pH 9.0, 10% MPD as crystallant, 28.66 mg/mL protein, crystal tracking ID 215415f6, VAPOR DIFFUSION, SITTING DROP, temperature 289K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2010-06-25 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 5.0.2' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 5.0.2 # _reflns.entry_id 3NXS _reflns.d_resolution_high 2.300 _reflns.number_obs 18658 _reflns.pdbx_Rmerge_I_obs 0.054 _reflns.pdbx_netI_over_sigmaI 22.870 _reflns.percent_possible_obs 98.200 _reflns.B_iso_Wilson_estimate 52.616 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.number_all 19008 _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy 8.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.300 2.360 12010 ? 1325 0.489 4.3 ? ? ? ? ? 97.900 1 1 2.360 2.420 11939 ? 1318 0.388 5.4 ? ? ? ? ? 98.000 2 1 2.420 2.490 11621 ? 1289 0.318 6.7 ? ? ? ? ? 98.000 3 1 2.490 2.570 11316 ? 1257 0.256 8.0 ? ? ? ? ? 98.300 4 1 2.570 2.660 10765 ? 1193 0.216 9.2 ? ? ? ? ? 98.100 5 1 2.660 2.750 10522 ? 1179 0.170 12.0 ? ? ? ? ? 97.900 6 1 2.750 2.850 10257 ? 1142 0.145 14.1 ? ? ? ? ? 98.000 7 1 2.850 2.970 9769 ? 1098 0.117 17.0 ? ? ? ? ? 98.400 8 1 2.970 3.100 9216 ? 1059 0.089 21.4 ? ? ? ? ? 98.700 9 1 3.100 3.250 8822 ? 1018 0.070 26.0 ? ? ? ? ? 98.200 10 1 3.250 3.430 8267 ? 967 0.055 32.2 ? ? ? ? ? 98.500 11 1 3.430 3.640 7684 ? 916 0.050 36.4 ? ? ? ? ? 98.800 12 1 3.640 3.890 7151 ? 865 0.043 40.8 ? ? ? ? ? 98.500 13 1 3.890 4.200 6588 ? 810 0.040 43.1 ? ? ? ? ? 98.400 14 1 4.200 4.600 6062 ? 755 0.039 45.8 ? ? ? ? ? 98.600 15 1 4.600 5.140 5427 ? 689 0.036 46.9 ? ? ? ? ? 99.000 16 1 5.140 5.940 5072 ? 608 0.036 45.3 ? ? ? ? ? 99.500 17 1 5.940 7.270 4381 ? 535 0.033 47.3 ? ? ? ? ? 99.300 18 1 7.270 10.290 3355 ? 418 0.025 50.3 ? ? ? ? ? 99.100 19 1 10.290 ? 1618 ? 217 0.021 49.3 ? ? ? ? ? 83.500 20 1 # _refine.entry_id 3NXS _refine.ls_d_res_high 2.3000 _refine.ls_d_res_low 50.0000 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 97.7500 _refine.ls_number_reflns_obs 18582 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS; U VALUES: WITH TLS ADDED' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2098 _refine.ls_R_factor_R_work 0.2086 _refine.ls_wR_factor_R_work 0.2070 _refine.ls_R_factor_R_free 0.2312 _refine.ls_wR_factor_R_free 0.2291 _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 943 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 56.8727 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -3.1300 _refine.aniso_B[2][2] 1.1800 _refine.aniso_B[3][3] 1.9500 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9490 _refine.correlation_coeff_Fo_to_Fc_free 0.9380 _refine.overall_SU_R_Cruickshank_DPI 0.2704 _refine.overall_SU_R_free 0.2017 _refine.pdbx_overall_ESU_R_Free 0.2020 _refine.overall_SU_ML 0.1400 _refine.overall_SU_B 12.7000 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 3MD0 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8430 _refine.B_iso_max 94.590 _refine.B_iso_min 26.700 _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2283 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 29 _refine_hist.number_atoms_solvent 90 _refine_hist.number_atoms_total 2402 _refine_hist.d_res_high 2.3000 _refine_hist.d_res_low 50.0000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2354 0.015 0.021 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 3212 1.501 1.978 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 306 5.956 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 98 36.045 22.959 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 377 15.167 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 25 22.532 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 386 0.100 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1760 0.007 0.021 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1519 0.931 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2425 1.757 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 835 2.658 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 786 4.418 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.3000 _refine_ls_shell.d_res_low 2.3600 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 96.9800 _refine_ls_shell.number_reflns_R_work 1247 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2450 _refine_ls_shell.R_factor_R_free 0.2990 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 69 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1316 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3NXS _struct.title 'Crystal structure of LAO/AO transport system from Mycobacterium smegmatis bound to GDP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3NXS _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.text ;Seattle Structural Genomics Center for Infectious Disease, SSGCID, Mycobacterium, pathogenic bacterium, tuberculosis, methylmalonic aciduria, ortholog, RAS-like GTPase superfamily, G-domain, arginine, ornithine, transport system, GTPAse, mislabeled as an ATPase, metallochaperone, TRANSPORT PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 9 ? GLY A 20 ? ASN A 6 GLY A 17 1 ? 12 HELX_P HELX_P2 2 ASP A 21 ? SER A 34 ? ASP A 18 SER A 31 1 ? 14 HELX_P HELX_P3 3 ARG A 36 ? LEU A 50 ? ARG A 33 LEU A 47 1 ? 15 HELX_P HELX_P4 4 GLY A 69 ? ALA A 84 ? GLY A 66 ALA A 81 1 ? 16 HELX_P HELX_P5 5 MET A 111 ? HIS A 117 ? MET A 108 HIS A 114 1 ? 7 HELX_P HELX_P6 6 THR A 130 ? ALA A 148 ? THR A 127 ALA A 145 1 ? 19 HELX_P HELX_P7 7 GLN A 162 ? GLY A 169 ? GLN A 159 GLY A 166 1 ? 8 HELX_P HELX_P8 8 VAL A 193 ? ALA A 197 ? VAL A 190 ALA A 194 5 ? 5 HELX_P HELX_P9 9 ASP A 206 ? GLU A 208 ? ASP A 203 GLU A 205 5 ? 3 HELX_P HELX_P10 10 HIS A 209 ? TYR A 228 ? HIS A 206 TYR A 225 1 ? 20 HELX_P HELX_P11 11 GLY A 248 ? ALA A 266 ? GLY A 245 ALA A 263 1 ? 19 HELX_P HELX_P12 12 GLU A 268 ? ASN A 295 ? GLU A 265 ASN A 292 1 ? 28 HELX_P HELX_P13 13 HIS A 296 ? LEU A 312 ? HIS A 293 LEU A 309 1 ? 17 HELX_P HELX_P14 14 THR A 316 ? ALA A 328 ? THR A 313 ALA A 325 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel B 6 7 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 120 ? ARG A 123 ? ALA A 117 ARG A 120 A 2 VAL A 88 ? ALA A 92 ? VAL A 85 ALA A 89 A 3 VAL A 152 ? THR A 157 ? VAL A 149 THR A 154 A 4 MET A 58 ? THR A 63 ? MET A 55 THR A 60 A 5 THR A 173 ? ALA A 180 ? THR A 170 ALA A 177 A 6 LEU A 186 ? GLN A 187 ? LEU A 183 GLN A 184 B 1 ALA A 120 ? ARG A 123 ? ALA A 117 ARG A 120 B 2 VAL A 88 ? ALA A 92 ? VAL A 85 ALA A 89 B 3 VAL A 152 ? THR A 157 ? VAL A 149 THR A 154 B 4 MET A 58 ? THR A 63 ? MET A 55 THR A 60 B 5 THR A 173 ? ALA A 180 ? THR A 170 ALA A 177 B 6 VAL A 199 ? VAL A 202 ? VAL A 196 VAL A 199 B 7 VAL A 238 ? THR A 240 ? VAL A 235 THR A 237 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O TYR A 121 ? O TYR A 118 N VAL A 90 ? N VAL A 87 A 2 3 N ALA A 89 ? N ALA A 86 O LEU A 154 ? O LEU A 151 A 3 4 O ILE A 153 ? O ILE A 150 N VAL A 60 ? N VAL A 57 A 4 5 N GLY A 61 ? N GLY A 58 O VAL A 175 ? O VAL A 172 A 5 6 N LEU A 179 ? N LEU A 176 O GLN A 187 ? O GLN A 184 B 1 2 O TYR A 121 ? O TYR A 118 N VAL A 90 ? N VAL A 87 B 2 3 N ALA A 89 ? N ALA A 86 O LEU A 154 ? O LEU A 151 B 3 4 O ILE A 153 ? O ILE A 150 N VAL A 60 ? N VAL A 57 B 4 5 N GLY A 61 ? N GLY A 58 O VAL A 175 ? O VAL A 172 B 5 6 N THR A 178 ? N THR A 175 O VAL A 201 ? O VAL A 198 B 6 7 N VAL A 202 ? N VAL A 199 O LEU A 239 ? O LEU A 236 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id GDP _struct_site.pdbx_auth_seq_id 327 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 14 _struct_site.details 'BINDING SITE FOR RESIDUE GDP A 327' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 14 GLY A 67 ? GLY A 64 . ? 1_555 ? 2 AC1 14 VAL A 68 ? VAL A 65 . ? 1_555 ? 3 AC1 14 GLY A 69 ? GLY A 66 . ? 1_555 ? 4 AC1 14 LYS A 70 ? LYS A 67 . ? 1_555 ? 5 AC1 14 SER A 71 ? SER A 68 . ? 1_555 ? 6 AC1 14 THR A 72 ? THR A 69 . ? 1_555 ? 7 AC1 14 ASN A 203 ? ASN A 200 . ? 1_555 ? 8 AC1 14 LYS A 204 ? LYS A 201 . ? 1_555 ? 9 AC1 14 ASP A 206 ? ASP A 203 . ? 1_555 ? 10 AC1 14 SER A 242 ? SER A 239 . ? 1_555 ? 11 AC1 14 ALA A 243 ? ALA A 240 . ? 1_555 ? 12 AC1 14 VAL A 244 ? VAL A 241 . ? 1_555 ? 13 AC1 14 HOH D . ? HOH A 358 . ? 1_555 ? 14 AC1 14 HOH D . ? HOH A 410 . ? 1_555 ? # _atom_sites.entry_id 3NXS _atom_sites.fract_transf_matrix[1][1] 0.012718 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010934 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017400 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -2 ? ? ? A . n A 1 2 PRO 2 -1 ? ? ? A . n A 1 3 GLY 3 0 ? ? ? A . n A 1 4 SER 4 1 ? ? ? A . n A 1 5 MET 5 2 ? ? ? A . n A 1 6 LYS 6 3 ? ? ? A . n A 1 7 ALA 7 4 ? ? ? A . n A 1 8 VAL 8 5 ? ? ? A . n A 1 9 ASN 9 6 6 ASN ASN A . n A 1 10 VAL 10 7 7 VAL VAL A . n A 1 11 HIS 11 8 8 HIS HIS A . n A 1 12 GLU 12 9 9 GLU GLU A . n A 1 13 LEU 13 10 10 LEU LEU A . n A 1 14 ALA 14 11 11 ALA ALA A . n A 1 15 GLN 15 12 12 GLN GLN A . n A 1 16 SER 16 13 13 SER SER A . n A 1 17 ILE 17 14 14 ILE ILE A . n A 1 18 ARG 18 15 15 ARG ARG A . n A 1 19 ASP 19 16 16 ASP ASP A . n A 1 20 GLY 20 17 17 GLY GLY A . n A 1 21 ASP 21 18 18 ASP ASP A . n A 1 22 ARG 22 19 19 ARG ARG A . n A 1 23 SER 23 20 20 SER SER A . n A 1 24 ALA 24 21 21 ALA ALA A . n A 1 25 LEU 25 22 22 LEU LEU A . n A 1 26 ALA 26 23 23 ALA ALA A . n A 1 27 ARG 27 24 24 ARG ARG A . n A 1 28 ALA 28 25 25 ALA ALA A . n A 1 29 ILE 29 26 26 ILE ILE A . n A 1 30 THR 30 27 27 THR THR A . n A 1 31 LEU 31 28 28 LEU LEU A . n A 1 32 VAL 32 29 29 VAL VAL A . n A 1 33 GLU 33 30 30 GLU GLU A . n A 1 34 SER 34 31 31 SER SER A . n A 1 35 THR 35 32 32 THR THR A . n A 1 36 ARG 36 33 33 ARG ARG A . n A 1 37 ALA 37 34 34 ALA ALA A . n A 1 38 ASP 38 35 35 ASP ASP A . n A 1 39 HIS 39 36 36 HIS HIS A . n A 1 40 ARG 40 37 37 ARG ARG A . n A 1 41 GLU 41 38 38 GLU GLU A . n A 1 42 GLN 42 39 39 GLN GLN A . n A 1 43 ALA 43 40 40 ALA ALA A . n A 1 44 GLN 44 41 41 GLN GLN A . n A 1 45 GLN 45 42 42 GLN GLN A . n A 1 46 LEU 46 43 43 LEU LEU A . n A 1 47 LEU 47 44 44 LEU LEU A . n A 1 48 LEU 48 45 45 LEU LEU A . n A 1 49 ASP 49 46 46 ASP ASP A . n A 1 50 LEU 50 47 47 LEU LEU A . n A 1 51 MET 51 48 48 MET MET A . n A 1 52 PRO 52 49 49 PRO PRO A . n A 1 53 GLU 53 50 50 GLU GLU A . n A 1 54 ALA 54 51 51 ALA ALA A . n A 1 55 GLY 55 52 52 GLY GLY A . n A 1 56 SER 56 53 53 SER SER A . n A 1 57 ALA 57 54 54 ALA ALA A . n A 1 58 MET 58 55 55 MET MET A . n A 1 59 HIS 59 56 56 HIS HIS A . n A 1 60 VAL 60 57 57 VAL VAL A . n A 1 61 GLY 61 58 58 GLY GLY A . n A 1 62 ILE 62 59 59 ILE ILE A . n A 1 63 THR 63 60 60 THR THR A . n A 1 64 GLY 64 61 61 GLY GLY A . n A 1 65 VAL 65 62 62 VAL VAL A . n A 1 66 PRO 66 63 63 PRO PRO A . n A 1 67 GLY 67 64 64 GLY GLY A . n A 1 68 VAL 68 65 65 VAL VAL A . n A 1 69 GLY 69 66 66 GLY GLY A . n A 1 70 LYS 70 67 67 LYS LYS A . n A 1 71 SER 71 68 68 SER SER A . n A 1 72 THR 72 69 69 THR THR A . n A 1 73 THR 73 70 70 THR THR A . n A 1 74 ILE 74 71 71 ILE ILE A . n A 1 75 GLU 75 72 72 GLU GLU A . n A 1 76 ALA 76 73 73 ALA ALA A . n A 1 77 LEU 77 74 74 LEU LEU A . n A 1 78 GLY 78 75 75 GLY GLY A . n A 1 79 MET 79 76 76 MET MET A . n A 1 80 HIS 80 77 77 HIS HIS A . n A 1 81 LEU 81 78 78 LEU LEU A . n A 1 82 ILE 82 79 79 ILE ILE A . n A 1 83 GLU 83 80 80 GLU GLU A . n A 1 84 ALA 84 81 81 ALA ALA A . n A 1 85 GLY 85 82 82 GLY GLY A . n A 1 86 HIS 86 83 83 HIS HIS A . n A 1 87 ARG 87 84 84 ARG ARG A . n A 1 88 VAL 88 85 85 VAL VAL A . n A 1 89 ALA 89 86 86 ALA ALA A . n A 1 90 VAL 90 87 87 VAL VAL A . n A 1 91 LEU 91 88 88 LEU LEU A . n A 1 92 ALA 92 89 89 ALA ALA A . n A 1 93 VAL 93 90 90 VAL VAL A . n A 1 94 ASP 94 91 91 ASP ASP A . n A 1 95 PRO 95 92 ? ? ? A . n A 1 96 SER 96 93 ? ? ? A . n A 1 97 SER 97 94 ? ? ? A . n A 1 98 THR 98 95 ? ? ? A . n A 1 99 ARG 99 96 ? ? ? A . n A 1 100 THR 100 97 ? ? ? A . n A 1 101 GLY 101 98 ? ? ? A . n A 1 102 GLY 102 99 ? ? ? A . n A 1 103 SER 103 100 ? ? ? A . n A 1 104 ILE 104 101 ? ? ? A . n A 1 105 LEU 105 102 ? ? ? A . n A 1 106 GLY 106 103 ? ? ? A . n A 1 107 ASP 107 104 ? ? ? A . n A 1 108 LYS 108 105 ? ? ? A . n A 1 109 THR 109 106 ? ? ? A . n A 1 110 ARG 110 107 107 ARG ARG A . n A 1 111 MET 111 108 108 MET MET A . n A 1 112 ALA 112 109 109 ALA ALA A . n A 1 113 ARG 113 110 110 ARG ARG A . n A 1 114 LEU 114 111 111 LEU LEU A . n A 1 115 ALA 115 112 112 ALA ALA A . n A 1 116 VAL 116 113 113 VAL VAL A . n A 1 117 HIS 117 114 114 HIS HIS A . n A 1 118 PRO 118 115 115 PRO PRO A . n A 1 119 ASP 119 116 116 ASP ASP A . n A 1 120 ALA 120 117 117 ALA ALA A . n A 1 121 TYR 121 118 118 TYR TYR A . n A 1 122 ILE 122 119 119 ILE ILE A . n A 1 123 ARG 123 120 120 ARG ARG A . n A 1 124 PRO 124 121 121 PRO PRO A . n A 1 125 SER 125 122 122 SER SER A . n A 1 126 PRO 126 123 123 PRO PRO A . n A 1 127 THR 127 124 124 THR THR A . n A 1 128 SER 128 125 125 SER SER A . n A 1 129 GLY 129 126 126 GLY GLY A . n A 1 130 THR 130 127 127 THR THR A . n A 1 131 LEU 131 128 128 LEU LEU A . n A 1 132 GLY 132 129 129 GLY GLY A . n A 1 133 GLY 133 130 130 GLY GLY A . n A 1 134 VAL 134 131 131 VAL VAL A . n A 1 135 ALA 135 132 132 ALA ALA A . n A 1 136 LYS 136 133 133 LYS LYS A . n A 1 137 ALA 137 134 134 ALA ALA A . n A 1 138 THR 138 135 135 THR THR A . n A 1 139 ARG 139 136 136 ARG ARG A . n A 1 140 GLU 140 137 137 GLU GLU A . n A 1 141 THR 141 138 138 THR THR A . n A 1 142 ILE 142 139 139 ILE ILE A . n A 1 143 VAL 143 140 140 VAL VAL A . n A 1 144 LEU 144 141 141 LEU LEU A . n A 1 145 LEU 145 142 142 LEU LEU A . n A 1 146 GLU 146 143 143 GLU GLU A . n A 1 147 ALA 147 144 144 ALA ALA A . n A 1 148 ALA 148 145 145 ALA ALA A . n A 1 149 GLY 149 146 146 GLY GLY A . n A 1 150 TYR 150 147 147 TYR TYR A . n A 1 151 ASP 151 148 148 ASP ASP A . n A 1 152 VAL 152 149 149 VAL VAL A . n A 1 153 ILE 153 150 150 ILE ILE A . n A 1 154 LEU 154 151 151 LEU LEU A . n A 1 155 VAL 155 152 152 VAL VAL A . n A 1 156 GLU 156 153 153 GLU GLU A . n A 1 157 THR 157 154 154 THR THR A . n A 1 158 VAL 158 155 155 VAL VAL A . n A 1 159 GLY 159 156 156 GLY GLY A . n A 1 160 VAL 160 157 157 VAL VAL A . n A 1 161 GLY 161 158 158 GLY GLY A . n A 1 162 GLN 162 159 159 GLN GLN A . n A 1 163 SER 163 160 160 SER SER A . n A 1 164 GLU 164 161 161 GLU GLU A . n A 1 165 VAL 165 162 162 VAL VAL A . n A 1 166 THR 166 163 163 THR THR A . n A 1 167 VAL 167 164 164 VAL VAL A . n A 1 168 ALA 168 165 165 ALA ALA A . n A 1 169 GLY 169 166 166 GLY GLY A . n A 1 170 MET 170 167 167 MET MET A . n A 1 171 VAL 171 168 168 VAL VAL A . n A 1 172 ASP 172 169 169 ASP ASP A . n A 1 173 THR 173 170 170 THR THR A . n A 1 174 PHE 174 171 171 PHE PHE A . n A 1 175 VAL 175 172 172 VAL VAL A . n A 1 176 PHE 176 173 173 PHE PHE A . n A 1 177 LEU 177 174 174 LEU LEU A . n A 1 178 THR 178 175 175 THR THR A . n A 1 179 LEU 179 176 176 LEU LEU A . n A 1 180 ALA 180 177 177 ALA ALA A . n A 1 181 ARG 181 178 178 ARG ARG A . n A 1 182 THR 182 179 179 THR THR A . n A 1 183 GLY 183 180 180 GLY GLY A . n A 1 184 ASP 184 181 181 ASP ASP A . n A 1 185 GLN 185 182 182 GLN GLN A . n A 1 186 LEU 186 183 183 LEU LEU A . n A 1 187 GLN 187 184 184 GLN GLN A . n A 1 188 GLY 188 185 185 GLY GLY A . n A 1 189 ILE 189 186 186 ILE ILE A . n A 1 190 LYS 190 187 187 LYS LYS A . n A 1 191 LYS 191 188 188 LYS LYS A . n A 1 192 GLY 192 189 189 GLY GLY A . n A 1 193 VAL 193 190 190 VAL VAL A . n A 1 194 LEU 194 191 191 LEU LEU A . n A 1 195 GLU 195 192 192 GLU GLU A . n A 1 196 LEU 196 193 193 LEU LEU A . n A 1 197 ALA 197 194 194 ALA ALA A . n A 1 198 ASP 198 195 195 ASP ASP A . n A 1 199 VAL 199 196 196 VAL VAL A . n A 1 200 ILE 200 197 197 ILE ILE A . n A 1 201 VAL 201 198 198 VAL VAL A . n A 1 202 VAL 202 199 199 VAL VAL A . n A 1 203 ASN 203 200 200 ASN ASN A . n A 1 204 LYS 204 201 201 LYS LYS A . n A 1 205 ALA 205 202 202 ALA ALA A . n A 1 206 ASP 206 203 203 ASP ASP A . n A 1 207 GLY 207 204 204 GLY GLY A . n A 1 208 GLU 208 205 205 GLU GLU A . n A 1 209 HIS 209 206 206 HIS HIS A . n A 1 210 ALA 210 207 207 ALA ALA A . n A 1 211 VAL 211 208 208 VAL VAL A . n A 1 212 GLU 212 209 209 GLU GLU A . n A 1 213 ALA 213 210 210 ALA ALA A . n A 1 214 LYS 214 211 211 LYS LYS A . n A 1 215 ALA 215 212 212 ALA ALA A . n A 1 216 ALA 216 213 213 ALA ALA A . n A 1 217 ALA 217 214 214 ALA ALA A . n A 1 218 ARG 218 215 215 ARG ARG A . n A 1 219 GLU 219 216 216 GLU GLU A . n A 1 220 LEU 220 217 217 LEU LEU A . n A 1 221 SER 221 218 218 SER SER A . n A 1 222 GLY 222 219 219 GLY GLY A . n A 1 223 ALA 223 220 220 ALA ALA A . n A 1 224 ILE 224 221 221 ILE ILE A . n A 1 225 ARG 225 222 222 ARG ARG A . n A 1 226 LEU 226 223 223 LEU LEU A . n A 1 227 ILE 227 224 224 ILE ILE A . n A 1 228 TYR 228 225 225 TYR TYR A . n A 1 229 PRO 229 226 226 PRO PRO A . n A 1 230 ARG 230 227 227 ARG ARG A . n A 1 231 GLU 231 228 228 GLU GLU A . n A 1 232 SER 232 229 229 SER SER A . n A 1 233 LEU 233 230 230 LEU LEU A . n A 1 234 TRP 234 231 231 TRP TRP A . n A 1 235 ARG 235 232 232 ARG ARG A . n A 1 236 PRO 236 233 233 PRO PRO A . n A 1 237 PRO 237 234 234 PRO PRO A . n A 1 238 VAL 238 235 235 VAL VAL A . n A 1 239 LEU 239 236 236 LEU LEU A . n A 1 240 THR 240 237 237 THR THR A . n A 1 241 MET 241 238 238 MET MET A . n A 1 242 SER 242 239 239 SER SER A . n A 1 243 ALA 243 240 240 ALA ALA A . n A 1 244 VAL 244 241 241 VAL VAL A . n A 1 245 GLU 245 242 242 GLU GLU A . n A 1 246 GLY 246 243 243 GLY GLY A . n A 1 247 THR 247 244 244 THR THR A . n A 1 248 GLY 248 245 245 GLY GLY A . n A 1 249 LEU 249 246 246 LEU LEU A . n A 1 250 PRO 250 247 247 PRO PRO A . n A 1 251 GLU 251 248 248 GLU GLU A . n A 1 252 LEU 252 249 249 LEU LEU A . n A 1 253 TRP 253 250 250 TRP TRP A . n A 1 254 GLU 254 251 251 GLU GLU A . n A 1 255 THR 255 252 252 THR THR A . n A 1 256 VAL 256 253 253 VAL VAL A . n A 1 257 LEU 257 254 254 LEU LEU A . n A 1 258 ARG 258 255 255 ARG ARG A . n A 1 259 HIS 259 256 256 HIS HIS A . n A 1 260 ARG 260 257 257 ARG ARG A . n A 1 261 GLU 261 258 258 GLU GLU A . n A 1 262 VAL 262 259 259 VAL VAL A . n A 1 263 LEU 263 260 260 LEU LEU A . n A 1 264 GLU 264 261 261 GLU GLU A . n A 1 265 GLU 265 262 262 GLU GLU A . n A 1 266 ALA 266 263 263 ALA ALA A . n A 1 267 GLY 267 264 264 GLY GLY A . n A 1 268 GLU 268 265 265 GLU GLU A . n A 1 269 PHE 269 266 266 PHE PHE A . n A 1 270 GLU 270 267 267 GLU GLU A . n A 1 271 ALA 271 268 268 ALA ALA A . n A 1 272 ARG 272 269 269 ARG ARG A . n A 1 273 ARG 273 270 270 ARG ARG A . n A 1 274 ARG 274 271 271 ARG ARG A . n A 1 275 THR 275 272 272 THR THR A . n A 1 276 GLN 276 273 273 GLN GLN A . n A 1 277 GLN 277 274 274 GLN GLN A . n A 1 278 VAL 278 275 275 VAL VAL A . n A 1 279 GLU 279 276 276 GLU GLU A . n A 1 280 TRP 280 277 277 TRP TRP A . n A 1 281 THR 281 278 278 THR THR A . n A 1 282 TRP 282 279 279 TRP TRP A . n A 1 283 SER 283 280 280 SER SER A . n A 1 284 MET 284 281 281 MET MET A . n A 1 285 VAL 285 282 282 VAL VAL A . n A 1 286 ARG 286 283 283 ARG ARG A . n A 1 287 ASP 287 284 284 ASP ASP A . n A 1 288 ALA 288 285 285 ALA ALA A . n A 1 289 VAL 289 286 286 VAL VAL A . n A 1 290 LEU 290 287 287 LEU LEU A . n A 1 291 ASP 291 288 288 ASP ASP A . n A 1 292 ARG 292 289 289 ARG ARG A . n A 1 293 VAL 293 290 290 VAL VAL A . n A 1 294 MET 294 291 291 MET MET A . n A 1 295 ASN 295 292 292 ASN ASN A . n A 1 296 HIS 296 293 293 HIS HIS A . n A 1 297 PRO 297 294 294 PRO PRO A . n A 1 298 GLU 298 295 295 GLU GLU A . n A 1 299 VAL 299 296 296 VAL VAL A . n A 1 300 ARG 300 297 297 ARG ARG A . n A 1 301 ARG 301 298 298 ARG ARG A . n A 1 302 ILE 302 299 299 ILE ILE A . n A 1 303 ARG 303 300 300 ARG ARG A . n A 1 304 ASP 304 301 301 ASP ASP A . n A 1 305 ASP 305 302 302 ASP ASP A . n A 1 306 VAL 306 303 303 VAL VAL A . n A 1 307 GLU 307 304 304 GLU GLU A . n A 1 308 GLN 308 305 305 GLN GLN A . n A 1 309 ARG 309 306 306 ARG ARG A . n A 1 310 VAL 310 307 307 VAL VAL A . n A 1 311 ARG 311 308 308 ARG ARG A . n A 1 312 LEU 312 309 309 LEU LEU A . n A 1 313 GLY 313 310 310 GLY GLY A . n A 1 314 GLU 314 311 311 GLU GLU A . n A 1 315 LEU 315 312 312 LEU LEU A . n A 1 316 THR 316 313 313 THR THR A . n A 1 317 PRO 317 314 314 PRO PRO A . n A 1 318 ALA 318 315 315 ALA ALA A . n A 1 319 LEU 319 316 316 LEU LEU A . n A 1 320 ALA 320 317 317 ALA ALA A . n A 1 321 ALA 321 318 318 ALA ALA A . n A 1 322 GLN 322 319 319 GLN GLN A . n A 1 323 GLU 323 320 320 GLU GLU A . n A 1 324 ILE 324 321 321 ILE ILE A . n A 1 325 LEU 325 322 322 LEU LEU A . n A 1 326 ASP 326 323 323 ASP ASP A . n A 1 327 ALA 327 324 324 ALA ALA A . n A 1 328 ALA 328 325 325 ALA ALA A . n A 1 329 GLN 329 326 326 GLN GLN A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Seattle Structural Genomics Center for Infectious Disease' _pdbx_SG_project.initial_of_center SSGCID # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDP 1 327 327 GDP GDP A . C 3 CL 1 328 328 CL CL A . D 4 HOH 1 329 1 HOH HOH A . D 4 HOH 2 330 2 HOH HOH A . D 4 HOH 3 331 3 HOH HOH A . D 4 HOH 4 332 4 HOH HOH A . D 4 HOH 5 333 5 HOH HOH A . D 4 HOH 6 334 6 HOH HOH A . D 4 HOH 7 335 7 HOH HOH A . D 4 HOH 8 336 8 HOH HOH A . D 4 HOH 9 337 9 HOH HOH A . D 4 HOH 10 338 10 HOH HOH A . D 4 HOH 11 339 11 HOH HOH A . D 4 HOH 12 340 12 HOH HOH A . D 4 HOH 13 341 13 HOH HOH A . D 4 HOH 14 342 14 HOH HOH A . D 4 HOH 15 343 15 HOH HOH A . D 4 HOH 16 344 16 HOH HOH A . D 4 HOH 17 345 17 HOH HOH A . D 4 HOH 18 346 18 HOH HOH A . D 4 HOH 19 347 19 HOH HOH A . D 4 HOH 20 348 20 HOH HOH A . D 4 HOH 21 349 21 HOH HOH A . D 4 HOH 22 350 22 HOH HOH A . D 4 HOH 23 351 23 HOH HOH A . D 4 HOH 24 352 24 HOH HOH A . D 4 HOH 25 353 25 HOH HOH A . D 4 HOH 26 354 26 HOH HOH A . D 4 HOH 27 355 27 HOH HOH A . D 4 HOH 28 356 28 HOH HOH A . D 4 HOH 29 357 29 HOH HOH A . D 4 HOH 30 358 30 HOH HOH A . D 4 HOH 31 359 31 HOH HOH A . D 4 HOH 32 360 32 HOH HOH A . D 4 HOH 33 361 33 HOH HOH A . D 4 HOH 34 362 34 HOH HOH A . D 4 HOH 35 363 35 HOH HOH A . D 4 HOH 36 364 36 HOH HOH A . D 4 HOH 37 365 37 HOH HOH A . D 4 HOH 38 366 38 HOH HOH A . D 4 HOH 39 367 39 HOH HOH A . D 4 HOH 40 368 40 HOH HOH A . D 4 HOH 41 369 41 HOH HOH A . D 4 HOH 42 370 42 HOH HOH A . D 4 HOH 43 371 43 HOH HOH A . D 4 HOH 44 372 44 HOH HOH A . D 4 HOH 45 373 45 HOH HOH A . D 4 HOH 46 374 46 HOH HOH A . D 4 HOH 47 375 47 HOH HOH A . D 4 HOH 48 376 48 HOH HOH A . D 4 HOH 49 377 49 HOH HOH A . D 4 HOH 50 378 50 HOH HOH A . D 4 HOH 51 379 51 HOH HOH A . D 4 HOH 52 380 52 HOH HOH A . D 4 HOH 53 381 53 HOH HOH A . D 4 HOH 54 382 54 HOH HOH A . D 4 HOH 55 383 55 HOH HOH A . D 4 HOH 56 384 56 HOH HOH A . D 4 HOH 57 385 57 HOH HOH A . D 4 HOH 58 386 58 HOH HOH A . D 4 HOH 59 387 59 HOH HOH A . D 4 HOH 60 388 60 HOH HOH A . D 4 HOH 61 389 61 HOH HOH A . D 4 HOH 62 390 62 HOH HOH A . D 4 HOH 63 391 63 HOH HOH A . D 4 HOH 64 392 64 HOH HOH A . D 4 HOH 65 393 65 HOH HOH A . D 4 HOH 66 394 66 HOH HOH A . D 4 HOH 67 395 67 HOH HOH A . D 4 HOH 68 396 68 HOH HOH A . D 4 HOH 69 397 69 HOH HOH A . D 4 HOH 70 398 70 HOH HOH A . D 4 HOH 71 399 71 HOH HOH A . D 4 HOH 72 400 72 HOH HOH A . D 4 HOH 73 401 73 HOH HOH A . D 4 HOH 74 402 74 HOH HOH A . D 4 HOH 75 403 75 HOH HOH A . D 4 HOH 76 404 76 HOH HOH A . D 4 HOH 77 405 77 HOH HOH A . D 4 HOH 78 406 78 HOH HOH A . D 4 HOH 79 407 79 HOH HOH A . D 4 HOH 80 408 80 HOH HOH A . D 4 HOH 81 409 81 HOH HOH A . D 4 HOH 82 410 82 HOH HOH A . D 4 HOH 83 411 83 HOH HOH A . D 4 HOH 84 412 84 HOH HOH A . D 4 HOH 85 413 85 HOH HOH A . D 4 HOH 86 414 86 HOH HOH A . D 4 HOH 87 415 87 HOH HOH A . D 4 HOH 88 416 88 HOH HOH A . D 4 HOH 89 417 89 HOH HOH A . D 4 HOH 90 418 90 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4910 ? 1 MORE -47 ? 1 'SSA (A^2)' 26690 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1.0000000000 0.0000000000 0.0000000000 78.6300000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-07-28 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2015-04-22 4 'Structure model' 1 3 2015-06-03 5 'Structure model' 1 4 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' pdbx_initial_refinement_model 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_ref_seq_dif.details' 4 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 27.8404 _pdbx_refine_tls.origin_y 10.5032 _pdbx_refine_tls.origin_z 1.4216 _pdbx_refine_tls.T[1][1] 0.0533 _pdbx_refine_tls.T[2][2] 0.1031 _pdbx_refine_tls.T[3][3] 0.1238 _pdbx_refine_tls.T[1][2] 0.0289 _pdbx_refine_tls.T[1][3] -0.0361 _pdbx_refine_tls.T[2][3] -0.0871 _pdbx_refine_tls.L[1][1] 0.5643 _pdbx_refine_tls.L[2][2] 0.4572 _pdbx_refine_tls.L[3][3] 0.0889 _pdbx_refine_tls.L[1][2] -0.1544 _pdbx_refine_tls.L[1][3] -0.1166 _pdbx_refine_tls.L[2][3] -0.0082 _pdbx_refine_tls.S[1][1] 0.0171 _pdbx_refine_tls.S[2][2] -0.0365 _pdbx_refine_tls.S[3][3] 0.0193 _pdbx_refine_tls.S[1][2] -0.0874 _pdbx_refine_tls.S[1][3] 0.1135 _pdbx_refine_tls.S[2][3] 0.1024 _pdbx_refine_tls.S[2][1] -0.0639 _pdbx_refine_tls.S[3][1] -0.0343 _pdbx_refine_tls.S[3][2] -0.0153 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id -10 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 9999 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # _pdbx_phasing_MR.entry_id 3NXS _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor 51.280 _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 3.000 _pdbx_phasing_MR.d_res_low_rotation 19.870 _pdbx_phasing_MR.d_res_high_translation 3.000 _pdbx_phasing_MR.d_res_low_translation 19.870 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 2 PHASER 2.1.4 'Wed Jun 24 14:00:05 2009' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 XDS . ? ? ? ? 'data reduction' ? ? ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CB _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 SER _pdbx_validate_rmsd_bond.auth_seq_id_1 280 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OG _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 SER _pdbx_validate_rmsd_bond.auth_seq_id_2 280 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.339 _pdbx_validate_rmsd_bond.bond_target_value 1.418 _pdbx_validate_rmsd_bond.bond_deviation -0.079 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.013 _pdbx_validate_rmsd_bond.linker_flag N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id MET _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 108 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -115.09 _pdbx_validate_torsion.psi 74.53 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 9 ? CG ? A GLU 12 CG 2 1 Y 1 A GLU 9 ? CD ? A GLU 12 CD 3 1 Y 1 A GLU 9 ? OE1 ? A GLU 12 OE1 4 1 Y 1 A GLU 9 ? OE2 ? A GLU 12 OE2 5 1 Y 1 A ARG 33 ? CG ? A ARG 36 CG 6 1 Y 1 A ARG 33 ? CD ? A ARG 36 CD 7 1 Y 1 A ARG 33 ? NE ? A ARG 36 NE 8 1 Y 1 A ARG 33 ? CZ ? A ARG 36 CZ 9 1 Y 1 A ARG 33 ? NH1 ? A ARG 36 NH1 10 1 Y 1 A ARG 33 ? NH2 ? A ARG 36 NH2 11 1 Y 1 A GLU 38 ? CG ? A GLU 41 CG 12 1 Y 1 A GLU 38 ? CD ? A GLU 41 CD 13 1 Y 1 A GLU 38 ? OE1 ? A GLU 41 OE1 14 1 Y 1 A GLU 38 ? OE2 ? A GLU 41 OE2 15 1 Y 1 A THR 124 ? OG1 ? A THR 127 OG1 16 1 Y 1 A THR 124 ? CG2 ? A THR 127 CG2 17 1 Y 1 A THR 127 ? OG1 ? A THR 130 OG1 18 1 Y 1 A THR 127 ? CG2 ? A THR 130 CG2 19 1 Y 1 A VAL 155 ? CG1 ? A VAL 158 CG1 20 1 Y 1 A VAL 155 ? CG2 ? A VAL 158 CG2 21 1 Y 1 A LYS 187 ? CG ? A LYS 190 CG 22 1 Y 1 A LYS 187 ? CD ? A LYS 190 CD 23 1 Y 1 A LYS 187 ? CE ? A LYS 190 CE 24 1 Y 1 A LYS 187 ? NZ ? A LYS 190 NZ 25 1 Y 1 A LYS 188 ? CG ? A LYS 191 CG 26 1 Y 1 A LYS 188 ? CD ? A LYS 191 CD 27 1 Y 1 A LYS 188 ? CE ? A LYS 191 CE 28 1 Y 1 A LYS 188 ? NZ ? A LYS 191 NZ 29 1 Y 1 A GLU 205 ? CG ? A GLU 208 CG 30 1 Y 1 A GLU 205 ? CD ? A GLU 208 CD 31 1 Y 1 A GLU 205 ? OE1 ? A GLU 208 OE1 32 1 Y 1 A GLU 205 ? OE2 ? A GLU 208 OE2 33 1 Y 1 A LYS 211 ? CG ? A LYS 214 CG 34 1 Y 1 A LYS 211 ? CD ? A LYS 214 CD 35 1 Y 1 A LYS 211 ? CE ? A LYS 214 CE 36 1 Y 1 A LYS 211 ? NZ ? A LYS 214 NZ 37 1 Y 1 A ARG 227 ? CG ? A ARG 230 CG 38 1 Y 1 A ARG 227 ? CD ? A ARG 230 CD 39 1 Y 1 A ARG 227 ? NE ? A ARG 230 NE 40 1 Y 1 A ARG 227 ? CZ ? A ARG 230 CZ 41 1 Y 1 A ARG 227 ? NH1 ? A ARG 230 NH1 42 1 Y 1 A ARG 227 ? NH2 ? A ARG 230 NH2 43 1 Y 1 A GLU 228 ? CG ? A GLU 231 CG 44 1 Y 1 A GLU 228 ? CD ? A GLU 231 CD 45 1 Y 1 A GLU 228 ? OE1 ? A GLU 231 OE1 46 1 Y 1 A GLU 228 ? OE2 ? A GLU 231 OE2 47 1 Y 1 A GLU 267 ? CG ? A GLU 270 CG 48 1 Y 1 A GLU 267 ? CD ? A GLU 270 CD 49 1 Y 1 A GLU 267 ? OE1 ? A GLU 270 OE1 50 1 Y 1 A GLU 267 ? OE2 ? A GLU 270 OE2 51 1 Y 1 A ARG 289 ? CG ? A ARG 292 CG 52 1 Y 1 A ARG 289 ? CD ? A ARG 292 CD 53 1 Y 1 A ARG 289 ? NE ? A ARG 292 NE 54 1 Y 1 A ARG 289 ? CZ ? A ARG 292 CZ 55 1 Y 1 A ARG 289 ? NH1 ? A ARG 292 NH1 56 1 Y 1 A ARG 289 ? NH2 ? A ARG 292 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -2 ? A GLY 1 2 1 Y 1 A PRO -1 ? A PRO 2 3 1 Y 1 A GLY 0 ? A GLY 3 4 1 Y 1 A SER 1 ? A SER 4 5 1 Y 1 A MET 2 ? A MET 5 6 1 Y 1 A LYS 3 ? A LYS 6 7 1 Y 1 A ALA 4 ? A ALA 7 8 1 Y 1 A VAL 5 ? A VAL 8 9 1 Y 1 A PRO 92 ? A PRO 95 10 1 Y 1 A SER 93 ? A SER 96 11 1 Y 1 A SER 94 ? A SER 97 12 1 Y 1 A THR 95 ? A THR 98 13 1 Y 1 A ARG 96 ? A ARG 99 14 1 Y 1 A THR 97 ? A THR 100 15 1 Y 1 A GLY 98 ? A GLY 101 16 1 Y 1 A GLY 99 ? A GLY 102 17 1 Y 1 A SER 100 ? A SER 103 18 1 Y 1 A ILE 101 ? A ILE 104 19 1 Y 1 A LEU 102 ? A LEU 105 20 1 Y 1 A GLY 103 ? A GLY 106 21 1 Y 1 A ASP 104 ? A ASP 107 22 1 Y 1 A LYS 105 ? A LYS 108 23 1 Y 1 A THR 106 ? A THR 109 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 GDP PB P N N 75 GDP O1B O N N 76 GDP O2B O N N 77 GDP O3B O N N 78 GDP O3A O N N 79 GDP PA P N N 80 GDP O1A O N N 81 GDP O2A O N N 82 GDP "O5'" O N N 83 GDP "C5'" C N N 84 GDP "C4'" C N R 85 GDP "O4'" O N N 86 GDP "C3'" C N S 87 GDP "O3'" O N N 88 GDP "C2'" C N R 89 GDP "O2'" O N N 90 GDP "C1'" C N R 91 GDP N9 N Y N 92 GDP C8 C Y N 93 GDP N7 N Y N 94 GDP C5 C Y N 95 GDP C6 C N N 96 GDP O6 O N N 97 GDP N1 N N N 98 GDP C2 C N N 99 GDP N2 N N N 100 GDP N3 N N N 101 GDP C4 C Y N 102 GDP HOB2 H N N 103 GDP HOB3 H N N 104 GDP HOA2 H N N 105 GDP "H5'" H N N 106 GDP "H5''" H N N 107 GDP "H4'" H N N 108 GDP "H3'" H N N 109 GDP "HO3'" H N N 110 GDP "H2'" H N N 111 GDP "HO2'" H N N 112 GDP "H1'" H N N 113 GDP H8 H N N 114 GDP HN1 H N N 115 GDP HN21 H N N 116 GDP HN22 H N N 117 GLN N N N N 118 GLN CA C N S 119 GLN C C N N 120 GLN O O N N 121 GLN CB C N N 122 GLN CG C N N 123 GLN CD C N N 124 GLN OE1 O N N 125 GLN NE2 N N N 126 GLN OXT O N N 127 GLN H H N N 128 GLN H2 H N N 129 GLN HA H N N 130 GLN HB2 H N N 131 GLN HB3 H N N 132 GLN HG2 H N N 133 GLN HG3 H N N 134 GLN HE21 H N N 135 GLN HE22 H N N 136 GLN HXT H N N 137 GLU N N N N 138 GLU CA C N S 139 GLU C C N N 140 GLU O O N N 141 GLU CB C N N 142 GLU CG C N N 143 GLU CD C N N 144 GLU OE1 O N N 145 GLU OE2 O N N 146 GLU OXT O N N 147 GLU H H N N 148 GLU H2 H N N 149 GLU HA H N N 150 GLU HB2 H N N 151 GLU HB3 H N N 152 GLU HG2 H N N 153 GLU HG3 H N N 154 GLU HE2 H N N 155 GLU HXT H N N 156 GLY N N N N 157 GLY CA C N N 158 GLY C C N N 159 GLY O O N N 160 GLY OXT O N N 161 GLY H H N N 162 GLY H2 H N N 163 GLY HA2 H N N 164 GLY HA3 H N N 165 GLY HXT H N N 166 HIS N N N N 167 HIS CA C N S 168 HIS C C N N 169 HIS O O N N 170 HIS CB C N N 171 HIS CG C Y N 172 HIS ND1 N Y N 173 HIS CD2 C Y N 174 HIS CE1 C Y N 175 HIS NE2 N Y N 176 HIS OXT O N N 177 HIS H H N N 178 HIS H2 H N N 179 HIS HA H N N 180 HIS HB2 H N N 181 HIS HB3 H N N 182 HIS HD1 H N N 183 HIS HD2 H N N 184 HIS HE1 H N N 185 HIS HE2 H N N 186 HIS HXT H N N 187 HOH O O N N 188 HOH H1 H N N 189 HOH H2 H N N 190 ILE N N N N 191 ILE CA C N S 192 ILE C C N N 193 ILE O O N N 194 ILE CB C N S 195 ILE CG1 C N N 196 ILE CG2 C N N 197 ILE CD1 C N N 198 ILE OXT O N N 199 ILE H H N N 200 ILE H2 H N N 201 ILE HA H N N 202 ILE HB H N N 203 ILE HG12 H N N 204 ILE HG13 H N N 205 ILE HG21 H N N 206 ILE HG22 H N N 207 ILE HG23 H N N 208 ILE HD11 H N N 209 ILE HD12 H N N 210 ILE HD13 H N N 211 ILE HXT H N N 212 LEU N N N N 213 LEU CA C N S 214 LEU C C N N 215 LEU O O N N 216 LEU CB C N N 217 LEU CG C N N 218 LEU CD1 C N N 219 LEU CD2 C N N 220 LEU OXT O N N 221 LEU H H N N 222 LEU H2 H N N 223 LEU HA H N N 224 LEU HB2 H N N 225 LEU HB3 H N N 226 LEU HG H N N 227 LEU HD11 H N N 228 LEU HD12 H N N 229 LEU HD13 H N N 230 LEU HD21 H N N 231 LEU HD22 H N N 232 LEU HD23 H N N 233 LEU HXT H N N 234 LYS N N N N 235 LYS CA C N S 236 LYS C C N N 237 LYS O O N N 238 LYS CB C N N 239 LYS CG C N N 240 LYS CD C N N 241 LYS CE C N N 242 LYS NZ N N N 243 LYS OXT O N N 244 LYS H H N N 245 LYS H2 H N N 246 LYS HA H N N 247 LYS HB2 H N N 248 LYS HB3 H N N 249 LYS HG2 H N N 250 LYS HG3 H N N 251 LYS HD2 H N N 252 LYS HD3 H N N 253 LYS HE2 H N N 254 LYS HE3 H N N 255 LYS HZ1 H N N 256 LYS HZ2 H N N 257 LYS HZ3 H N N 258 LYS HXT H N N 259 MET N N N N 260 MET CA C N S 261 MET C C N N 262 MET O O N N 263 MET CB C N N 264 MET CG C N N 265 MET SD S N N 266 MET CE C N N 267 MET OXT O N N 268 MET H H N N 269 MET H2 H N N 270 MET HA H N N 271 MET HB2 H N N 272 MET HB3 H N N 273 MET HG2 H N N 274 MET HG3 H N N 275 MET HE1 H N N 276 MET HE2 H N N 277 MET HE3 H N N 278 MET HXT H N N 279 PHE N N N N 280 PHE CA C N S 281 PHE C C N N 282 PHE O O N N 283 PHE CB C N N 284 PHE CG C Y N 285 PHE CD1 C Y N 286 PHE CD2 C Y N 287 PHE CE1 C Y N 288 PHE CE2 C Y N 289 PHE CZ C Y N 290 PHE OXT O N N 291 PHE H H N N 292 PHE H2 H N N 293 PHE HA H N N 294 PHE HB2 H N N 295 PHE HB3 H N N 296 PHE HD1 H N N 297 PHE HD2 H N N 298 PHE HE1 H N N 299 PHE HE2 H N N 300 PHE HZ H N N 301 PHE HXT H N N 302 PRO N N N N 303 PRO CA C N S 304 PRO C C N N 305 PRO O O N N 306 PRO CB C N N 307 PRO CG C N N 308 PRO CD C N N 309 PRO OXT O N N 310 PRO H H N N 311 PRO HA H N N 312 PRO HB2 H N N 313 PRO HB3 H N N 314 PRO HG2 H N N 315 PRO HG3 H N N 316 PRO HD2 H N N 317 PRO HD3 H N N 318 PRO HXT H N N 319 SER N N N N 320 SER CA C N S 321 SER C C N N 322 SER O O N N 323 SER CB C N N 324 SER OG O N N 325 SER OXT O N N 326 SER H H N N 327 SER H2 H N N 328 SER HA H N N 329 SER HB2 H N N 330 SER HB3 H N N 331 SER HG H N N 332 SER HXT H N N 333 THR N N N N 334 THR CA C N S 335 THR C C N N 336 THR O O N N 337 THR CB C N R 338 THR OG1 O N N 339 THR CG2 C N N 340 THR OXT O N N 341 THR H H N N 342 THR H2 H N N 343 THR HA H N N 344 THR HB H N N 345 THR HG1 H N N 346 THR HG21 H N N 347 THR HG22 H N N 348 THR HG23 H N N 349 THR HXT H N N 350 TRP N N N N 351 TRP CA C N S 352 TRP C C N N 353 TRP O O N N 354 TRP CB C N N 355 TRP CG C Y N 356 TRP CD1 C Y N 357 TRP CD2 C Y N 358 TRP NE1 N Y N 359 TRP CE2 C Y N 360 TRP CE3 C Y N 361 TRP CZ2 C Y N 362 TRP CZ3 C Y N 363 TRP CH2 C Y N 364 TRP OXT O N N 365 TRP H H N N 366 TRP H2 H N N 367 TRP HA H N N 368 TRP HB2 H N N 369 TRP HB3 H N N 370 TRP HD1 H N N 371 TRP HE1 H N N 372 TRP HE3 H N N 373 TRP HZ2 H N N 374 TRP HZ3 H N N 375 TRP HH2 H N N 376 TRP HXT H N N 377 TYR N N N N 378 TYR CA C N S 379 TYR C C N N 380 TYR O O N N 381 TYR CB C N N 382 TYR CG C Y N 383 TYR CD1 C Y N 384 TYR CD2 C Y N 385 TYR CE1 C Y N 386 TYR CE2 C Y N 387 TYR CZ C Y N 388 TYR OH O N N 389 TYR OXT O N N 390 TYR H H N N 391 TYR H2 H N N 392 TYR HA H N N 393 TYR HB2 H N N 394 TYR HB3 H N N 395 TYR HD1 H N N 396 TYR HD2 H N N 397 TYR HE1 H N N 398 TYR HE2 H N N 399 TYR HH H N N 400 TYR HXT H N N 401 VAL N N N N 402 VAL CA C N S 403 VAL C C N N 404 VAL O O N N 405 VAL CB C N N 406 VAL CG1 C N N 407 VAL CG2 C N N 408 VAL OXT O N N 409 VAL H H N N 410 VAL H2 H N N 411 VAL HA H N N 412 VAL HB H N N 413 VAL HG11 H N N 414 VAL HG12 H N N 415 VAL HG13 H N N 416 VAL HG21 H N N 417 VAL HG22 H N N 418 VAL HG23 H N N 419 VAL HXT H N N 420 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GDP PB O1B doub N N 70 GDP PB O2B sing N N 71 GDP PB O3B sing N N 72 GDP PB O3A sing N N 73 GDP O2B HOB2 sing N N 74 GDP O3B HOB3 sing N N 75 GDP O3A PA sing N N 76 GDP PA O1A doub N N 77 GDP PA O2A sing N N 78 GDP PA "O5'" sing N N 79 GDP O2A HOA2 sing N N 80 GDP "O5'" "C5'" sing N N 81 GDP "C5'" "C4'" sing N N 82 GDP "C5'" "H5'" sing N N 83 GDP "C5'" "H5''" sing N N 84 GDP "C4'" "O4'" sing N N 85 GDP "C4'" "C3'" sing N N 86 GDP "C4'" "H4'" sing N N 87 GDP "O4'" "C1'" sing N N 88 GDP "C3'" "O3'" sing N N 89 GDP "C3'" "C2'" sing N N 90 GDP "C3'" "H3'" sing N N 91 GDP "O3'" "HO3'" sing N N 92 GDP "C2'" "O2'" sing N N 93 GDP "C2'" "C1'" sing N N 94 GDP "C2'" "H2'" sing N N 95 GDP "O2'" "HO2'" sing N N 96 GDP "C1'" N9 sing N N 97 GDP "C1'" "H1'" sing N N 98 GDP N9 C8 sing Y N 99 GDP N9 C4 sing Y N 100 GDP C8 N7 doub Y N 101 GDP C8 H8 sing N N 102 GDP N7 C5 sing Y N 103 GDP C5 C6 sing N N 104 GDP C5 C4 doub Y N 105 GDP C6 O6 doub N N 106 GDP C6 N1 sing N N 107 GDP N1 C2 sing N N 108 GDP N1 HN1 sing N N 109 GDP C2 N2 sing N N 110 GDP C2 N3 doub N N 111 GDP N2 HN21 sing N N 112 GDP N2 HN22 sing N N 113 GDP N3 C4 sing N N 114 GLN N CA sing N N 115 GLN N H sing N N 116 GLN N H2 sing N N 117 GLN CA C sing N N 118 GLN CA CB sing N N 119 GLN CA HA sing N N 120 GLN C O doub N N 121 GLN C OXT sing N N 122 GLN CB CG sing N N 123 GLN CB HB2 sing N N 124 GLN CB HB3 sing N N 125 GLN CG CD sing N N 126 GLN CG HG2 sing N N 127 GLN CG HG3 sing N N 128 GLN CD OE1 doub N N 129 GLN CD NE2 sing N N 130 GLN NE2 HE21 sing N N 131 GLN NE2 HE22 sing N N 132 GLN OXT HXT sing N N 133 GLU N CA sing N N 134 GLU N H sing N N 135 GLU N H2 sing N N 136 GLU CA C sing N N 137 GLU CA CB sing N N 138 GLU CA HA sing N N 139 GLU C O doub N N 140 GLU C OXT sing N N 141 GLU CB CG sing N N 142 GLU CB HB2 sing N N 143 GLU CB HB3 sing N N 144 GLU CG CD sing N N 145 GLU CG HG2 sing N N 146 GLU CG HG3 sing N N 147 GLU CD OE1 doub N N 148 GLU CD OE2 sing N N 149 GLU OE2 HE2 sing N N 150 GLU OXT HXT sing N N 151 GLY N CA sing N N 152 GLY N H sing N N 153 GLY N H2 sing N N 154 GLY CA C sing N N 155 GLY CA HA2 sing N N 156 GLY CA HA3 sing N N 157 GLY C O doub N N 158 GLY C OXT sing N N 159 GLY OXT HXT sing N N 160 HIS N CA sing N N 161 HIS N H sing N N 162 HIS N H2 sing N N 163 HIS CA C sing N N 164 HIS CA CB sing N N 165 HIS CA HA sing N N 166 HIS C O doub N N 167 HIS C OXT sing N N 168 HIS CB CG sing N N 169 HIS CB HB2 sing N N 170 HIS CB HB3 sing N N 171 HIS CG ND1 sing Y N 172 HIS CG CD2 doub Y N 173 HIS ND1 CE1 doub Y N 174 HIS ND1 HD1 sing N N 175 HIS CD2 NE2 sing Y N 176 HIS CD2 HD2 sing N N 177 HIS CE1 NE2 sing Y N 178 HIS CE1 HE1 sing N N 179 HIS NE2 HE2 sing N N 180 HIS OXT HXT sing N N 181 HOH O H1 sing N N 182 HOH O H2 sing N N 183 ILE N CA sing N N 184 ILE N H sing N N 185 ILE N H2 sing N N 186 ILE CA C sing N N 187 ILE CA CB sing N N 188 ILE CA HA sing N N 189 ILE C O doub N N 190 ILE C OXT sing N N 191 ILE CB CG1 sing N N 192 ILE CB CG2 sing N N 193 ILE CB HB sing N N 194 ILE CG1 CD1 sing N N 195 ILE CG1 HG12 sing N N 196 ILE CG1 HG13 sing N N 197 ILE CG2 HG21 sing N N 198 ILE CG2 HG22 sing N N 199 ILE CG2 HG23 sing N N 200 ILE CD1 HD11 sing N N 201 ILE CD1 HD12 sing N N 202 ILE CD1 HD13 sing N N 203 ILE OXT HXT sing N N 204 LEU N CA sing N N 205 LEU N H sing N N 206 LEU N H2 sing N N 207 LEU CA C sing N N 208 LEU CA CB sing N N 209 LEU CA HA sing N N 210 LEU C O doub N N 211 LEU C OXT sing N N 212 LEU CB CG sing N N 213 LEU CB HB2 sing N N 214 LEU CB HB3 sing N N 215 LEU CG CD1 sing N N 216 LEU CG CD2 sing N N 217 LEU CG HG sing N N 218 LEU CD1 HD11 sing N N 219 LEU CD1 HD12 sing N N 220 LEU CD1 HD13 sing N N 221 LEU CD2 HD21 sing N N 222 LEU CD2 HD22 sing N N 223 LEU CD2 HD23 sing N N 224 LEU OXT HXT sing N N 225 LYS N CA sing N N 226 LYS N H sing N N 227 LYS N H2 sing N N 228 LYS CA C sing N N 229 LYS CA CB sing N N 230 LYS CA HA sing N N 231 LYS C O doub N N 232 LYS C OXT sing N N 233 LYS CB CG sing N N 234 LYS CB HB2 sing N N 235 LYS CB HB3 sing N N 236 LYS CG CD sing N N 237 LYS CG HG2 sing N N 238 LYS CG HG3 sing N N 239 LYS CD CE sing N N 240 LYS CD HD2 sing N N 241 LYS CD HD3 sing N N 242 LYS CE NZ sing N N 243 LYS CE HE2 sing N N 244 LYS CE HE3 sing N N 245 LYS NZ HZ1 sing N N 246 LYS NZ HZ2 sing N N 247 LYS NZ HZ3 sing N N 248 LYS OXT HXT sing N N 249 MET N CA sing N N 250 MET N H sing N N 251 MET N H2 sing N N 252 MET CA C sing N N 253 MET CA CB sing N N 254 MET CA HA sing N N 255 MET C O doub N N 256 MET C OXT sing N N 257 MET CB CG sing N N 258 MET CB HB2 sing N N 259 MET CB HB3 sing N N 260 MET CG SD sing N N 261 MET CG HG2 sing N N 262 MET CG HG3 sing N N 263 MET SD CE sing N N 264 MET CE HE1 sing N N 265 MET CE HE2 sing N N 266 MET CE HE3 sing N N 267 MET OXT HXT sing N N 268 PHE N CA sing N N 269 PHE N H sing N N 270 PHE N H2 sing N N 271 PHE CA C sing N N 272 PHE CA CB sing N N 273 PHE CA HA sing N N 274 PHE C O doub N N 275 PHE C OXT sing N N 276 PHE CB CG sing N N 277 PHE CB HB2 sing N N 278 PHE CB HB3 sing N N 279 PHE CG CD1 doub Y N 280 PHE CG CD2 sing Y N 281 PHE CD1 CE1 sing Y N 282 PHE CD1 HD1 sing N N 283 PHE CD2 CE2 doub Y N 284 PHE CD2 HD2 sing N N 285 PHE CE1 CZ doub Y N 286 PHE CE1 HE1 sing N N 287 PHE CE2 CZ sing Y N 288 PHE CE2 HE2 sing N N 289 PHE CZ HZ sing N N 290 PHE OXT HXT sing N N 291 PRO N CA sing N N 292 PRO N CD sing N N 293 PRO N H sing N N 294 PRO CA C sing N N 295 PRO CA CB sing N N 296 PRO CA HA sing N N 297 PRO C O doub N N 298 PRO C OXT sing N N 299 PRO CB CG sing N N 300 PRO CB HB2 sing N N 301 PRO CB HB3 sing N N 302 PRO CG CD sing N N 303 PRO CG HG2 sing N N 304 PRO CG HG3 sing N N 305 PRO CD HD2 sing N N 306 PRO CD HD3 sing N N 307 PRO OXT HXT sing N N 308 SER N CA sing N N 309 SER N H sing N N 310 SER N H2 sing N N 311 SER CA C sing N N 312 SER CA CB sing N N 313 SER CA HA sing N N 314 SER C O doub N N 315 SER C OXT sing N N 316 SER CB OG sing N N 317 SER CB HB2 sing N N 318 SER CB HB3 sing N N 319 SER OG HG sing N N 320 SER OXT HXT sing N N 321 THR N CA sing N N 322 THR N H sing N N 323 THR N H2 sing N N 324 THR CA C sing N N 325 THR CA CB sing N N 326 THR CA HA sing N N 327 THR C O doub N N 328 THR C OXT sing N N 329 THR CB OG1 sing N N 330 THR CB CG2 sing N N 331 THR CB HB sing N N 332 THR OG1 HG1 sing N N 333 THR CG2 HG21 sing N N 334 THR CG2 HG22 sing N N 335 THR CG2 HG23 sing N N 336 THR OXT HXT sing N N 337 TRP N CA sing N N 338 TRP N H sing N N 339 TRP N H2 sing N N 340 TRP CA C sing N N 341 TRP CA CB sing N N 342 TRP CA HA sing N N 343 TRP C O doub N N 344 TRP C OXT sing N N 345 TRP CB CG sing N N 346 TRP CB HB2 sing N N 347 TRP CB HB3 sing N N 348 TRP CG CD1 doub Y N 349 TRP CG CD2 sing Y N 350 TRP CD1 NE1 sing Y N 351 TRP CD1 HD1 sing N N 352 TRP CD2 CE2 doub Y N 353 TRP CD2 CE3 sing Y N 354 TRP NE1 CE2 sing Y N 355 TRP NE1 HE1 sing N N 356 TRP CE2 CZ2 sing Y N 357 TRP CE3 CZ3 doub Y N 358 TRP CE3 HE3 sing N N 359 TRP CZ2 CH2 doub Y N 360 TRP CZ2 HZ2 sing N N 361 TRP CZ3 CH2 sing Y N 362 TRP CZ3 HZ3 sing N N 363 TRP CH2 HH2 sing N N 364 TRP OXT HXT sing N N 365 TYR N CA sing N N 366 TYR N H sing N N 367 TYR N H2 sing N N 368 TYR CA C sing N N 369 TYR CA CB sing N N 370 TYR CA HA sing N N 371 TYR C O doub N N 372 TYR C OXT sing N N 373 TYR CB CG sing N N 374 TYR CB HB2 sing N N 375 TYR CB HB3 sing N N 376 TYR CG CD1 doub Y N 377 TYR CG CD2 sing Y N 378 TYR CD1 CE1 sing Y N 379 TYR CD1 HD1 sing N N 380 TYR CD2 CE2 doub Y N 381 TYR CD2 HD2 sing N N 382 TYR CE1 CZ doub Y N 383 TYR CE1 HE1 sing N N 384 TYR CE2 CZ sing Y N 385 TYR CE2 HE2 sing N N 386 TYR CZ OH sing N N 387 TYR OH HH sing N N 388 TYR OXT HXT sing N N 389 VAL N CA sing N N 390 VAL N H sing N N 391 VAL N H2 sing N N 392 VAL CA C sing N N 393 VAL CA CB sing N N 394 VAL CA HA sing N N 395 VAL C O doub N N 396 VAL C OXT sing N N 397 VAL CB CG1 sing N N 398 VAL CB CG2 sing N N 399 VAL CB HB sing N N 400 VAL CG1 HG11 sing N N 401 VAL CG1 HG12 sing N N 402 VAL CG1 HG13 sing N N 403 VAL CG2 HG21 sing N N 404 VAL CG2 HG22 sing N N 405 VAL CG2 HG23 sing N N 406 VAL OXT HXT sing N N 407 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "GUANOSINE-5'-DIPHOSPHATE" GDP 3 'CHLORIDE ION' CL 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3MD0 _pdbx_initial_refinement_model.details ? #