data_3NYJ # _entry.id 3NYJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3NYJ pdb_00003nyj 10.2210/pdb3nyj/pdb RCSB RCSB060439 ? ? WWPDB D_1000060439 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-06-01 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-08 4 'Structure model' 1 3 2024-11-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_entry_details 6 4 'Structure model' pdbx_modification_feature 7 4 'Structure model' pdbx_struct_conn_angle 8 4 'Structure model' struct_conn 9 4 'Structure model' struct_ref_seq_dif 10 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.name' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.value' 7 4 'Structure model' '_struct_conn.conn_type_id' 8 4 'Structure model' '_struct_conn.id' 9 4 'Structure model' '_struct_conn.pdbx_dist_value' 10 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 11 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 12 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 13 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 14 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 15 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 16 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 17 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 18 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 19 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 20 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 21 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 22 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 23 4 'Structure model' '_struct_ref_seq_dif.details' 24 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 25 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 26 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 3NYJ _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-07-15 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ha, Y.' 1 'Hu, J.' 2 'Lee, S.' 3 'Liu, X.' 4 # _citation.id primary _citation.title 'The E2 Domains of APP and APLP1 Share a Conserved Mode of Dimerization.' _citation.journal_abbrev Biochemistry _citation.journal_volume 50 _citation.page_first 5453 _citation.page_last 5464 _citation.year 2011 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21574595 _citation.pdbx_database_id_DOI 10.1021/bi101846x # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lee, S.' 1 ? primary 'Xue, Y.' 2 ? primary 'Hu, J.' 3 ? primary 'Wang, Y.' 4 ? primary 'Liu, X.' 5 ? primary 'Demeler, B.' 6 ? primary 'Ha, Y.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Amyloid beta A4 protein' 24770.740 1 ? ? ? ? 2 non-polymer syn 'OSMIUM ION' 190.230 1 ? ? ? ? 3 water nat water 18.015 36 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Alzheimer disease amyloid protein, ABPP, APPI, APP, PreA4, Cerebral vascular amyloid peptide, CVAP, Protease nexin-II, PN-II, N-APP, Soluble APP-alpha, S-APP-alpha, Soluble APP-beta, S-APP-beta, C99, Beta-amyloid protein 42, Beta-APP42, Beta-amyloid protein 40, Beta-APP40, C83, P3(42), P3(40), C80, Gamma-secretase C-terminal fragment 59, Gamma-CTF(59), Amyloid intracellular domain 59, AICD-59, AID(59), Gamma-secretase C-terminal fragment 57, Gamma-CTF(57), Amyloid intracellular domain 57, AICD-57, AID(57), Gamma-secretase C-terminal fragment 50, Gamma-CTF(50), Amyloid intracellular domain 50, AICD-50, AID(50), C31 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GSH(MSE)PTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRER(MSE)SQV(MSE)REWEEAERQAKNLPKADK KAVIQHFQEKVESLEQEAANERQQLVETH(MSE)ARVEA(MSE)LNDRRRLALENYITALQAVPPRPRHVFN(MSE)LKK YVRAEQKDRQHTLKHFEHVR(MSE)VDPKKAAQIRSQV(MSE)THLRVIYER(MSE)NQSLSLLYNVPAVAEEIQDEVDE LLQ ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVE SLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDP KKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'OSMIUM ION' OS 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MSE n 1 5 PRO n 1 6 THR n 1 7 THR n 1 8 ALA n 1 9 ALA n 1 10 SER n 1 11 THR n 1 12 PRO n 1 13 ASP n 1 14 ALA n 1 15 VAL n 1 16 ASP n 1 17 LYS n 1 18 TYR n 1 19 LEU n 1 20 GLU n 1 21 THR n 1 22 PRO n 1 23 GLY n 1 24 ASP n 1 25 GLU n 1 26 ASN n 1 27 GLU n 1 28 HIS n 1 29 ALA n 1 30 HIS n 1 31 PHE n 1 32 GLN n 1 33 LYS n 1 34 ALA n 1 35 LYS n 1 36 GLU n 1 37 ARG n 1 38 LEU n 1 39 GLU n 1 40 ALA n 1 41 LYS n 1 42 HIS n 1 43 ARG n 1 44 GLU n 1 45 ARG n 1 46 MSE n 1 47 SER n 1 48 GLN n 1 49 VAL n 1 50 MSE n 1 51 ARG n 1 52 GLU n 1 53 TRP n 1 54 GLU n 1 55 GLU n 1 56 ALA n 1 57 GLU n 1 58 ARG n 1 59 GLN n 1 60 ALA n 1 61 LYS n 1 62 ASN n 1 63 LEU n 1 64 PRO n 1 65 LYS n 1 66 ALA n 1 67 ASP n 1 68 LYS n 1 69 LYS n 1 70 ALA n 1 71 VAL n 1 72 ILE n 1 73 GLN n 1 74 HIS n 1 75 PHE n 1 76 GLN n 1 77 GLU n 1 78 LYS n 1 79 VAL n 1 80 GLU n 1 81 SER n 1 82 LEU n 1 83 GLU n 1 84 GLN n 1 85 GLU n 1 86 ALA n 1 87 ALA n 1 88 ASN n 1 89 GLU n 1 90 ARG n 1 91 GLN n 1 92 GLN n 1 93 LEU n 1 94 VAL n 1 95 GLU n 1 96 THR n 1 97 HIS n 1 98 MSE n 1 99 ALA n 1 100 ARG n 1 101 VAL n 1 102 GLU n 1 103 ALA n 1 104 MSE n 1 105 LEU n 1 106 ASN n 1 107 ASP n 1 108 ARG n 1 109 ARG n 1 110 ARG n 1 111 LEU n 1 112 ALA n 1 113 LEU n 1 114 GLU n 1 115 ASN n 1 116 TYR n 1 117 ILE n 1 118 THR n 1 119 ALA n 1 120 LEU n 1 121 GLN n 1 122 ALA n 1 123 VAL n 1 124 PRO n 1 125 PRO n 1 126 ARG n 1 127 PRO n 1 128 ARG n 1 129 HIS n 1 130 VAL n 1 131 PHE n 1 132 ASN n 1 133 MSE n 1 134 LEU n 1 135 LYS n 1 136 LYS n 1 137 TYR n 1 138 VAL n 1 139 ARG n 1 140 ALA n 1 141 GLU n 1 142 GLN n 1 143 LYS n 1 144 ASP n 1 145 ARG n 1 146 GLN n 1 147 HIS n 1 148 THR n 1 149 LEU n 1 150 LYS n 1 151 HIS n 1 152 PHE n 1 153 GLU n 1 154 HIS n 1 155 VAL n 1 156 ARG n 1 157 MSE n 1 158 VAL n 1 159 ASP n 1 160 PRO n 1 161 LYS n 1 162 LYS n 1 163 ALA n 1 164 ALA n 1 165 GLN n 1 166 ILE n 1 167 ARG n 1 168 SER n 1 169 GLN n 1 170 VAL n 1 171 MSE n 1 172 THR n 1 173 HIS n 1 174 LEU n 1 175 ARG n 1 176 VAL n 1 177 ILE n 1 178 TYR n 1 179 GLU n 1 180 ARG n 1 181 MSE n 1 182 ASN n 1 183 GLN n 1 184 SER n 1 185 LEU n 1 186 SER n 1 187 LEU n 1 188 LEU n 1 189 TYR n 1 190 ASN n 1 191 VAL n 1 192 PRO n 1 193 ALA n 1 194 VAL n 1 195 ALA n 1 196 GLU n 1 197 GLU n 1 198 ILE n 1 199 GLN n 1 200 ASP n 1 201 GLU n 1 202 VAL n 1 203 ASP n 1 204 GLU n 1 205 LEU n 1 206 LEU n 1 207 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'A4, AD1, APP' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 OS non-polymer . 'OSMIUM ION' ? 'Os 3' 190.230 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 342 ? ? ? A . n A 1 2 SER 2 343 ? ? ? A . n A 1 3 HIS 3 344 ? ? ? A . n A 1 4 MSE 4 345 ? ? ? A . n A 1 5 PRO 5 346 ? ? ? A . n A 1 6 THR 6 347 ? ? ? A . n A 1 7 THR 7 348 ? ? ? A . n A 1 8 ALA 8 349 ? ? ? A . n A 1 9 ALA 9 350 ? ? ? A . n A 1 10 SER 10 351 ? ? ? A . n A 1 11 THR 11 352 ? ? ? A . n A 1 12 PRO 12 353 ? ? ? A . n A 1 13 ASP 13 354 ? ? ? A . n A 1 14 ALA 14 355 ? ? ? A . n A 1 15 VAL 15 356 ? ? ? A . n A 1 16 ASP 16 357 ? ? ? A . n A 1 17 LYS 17 358 ? ? ? A . n A 1 18 TYR 18 359 ? ? ? A . n A 1 19 LEU 19 360 360 LEU ALA A . n A 1 20 GLU 20 361 361 GLU ALA A . n A 1 21 THR 21 362 362 THR ALA A . n A 1 22 PRO 22 363 363 PRO PRO A . n A 1 23 GLY 23 364 364 GLY GLY A . n A 1 24 ASP 24 365 365 ASP ASP A . n A 1 25 GLU 25 366 366 GLU GLU A . n A 1 26 ASN 26 367 367 ASN ASN A . n A 1 27 GLU 27 368 368 GLU GLU A . n A 1 28 HIS 28 369 369 HIS HIS A . n A 1 29 ALA 29 370 370 ALA ALA A . n A 1 30 HIS 30 371 371 HIS ALA A . n A 1 31 PHE 31 372 372 PHE PHE A . n A 1 32 GLN 32 373 373 GLN ALA A . n A 1 33 LYS 33 374 374 LYS LYS A . n A 1 34 ALA 34 375 375 ALA ALA A . n A 1 35 LYS 35 376 376 LYS LYS A . n A 1 36 GLU 36 377 377 GLU ALA A . n A 1 37 ARG 37 378 378 ARG ARG A . n A 1 38 LEU 38 379 379 LEU LEU A . n A 1 39 GLU 39 380 380 GLU ALA A . n A 1 40 ALA 40 381 381 ALA ALA A . n A 1 41 LYS 41 382 382 LYS LYS A . n A 1 42 HIS 42 383 383 HIS ALA A . n A 1 43 ARG 43 384 384 ARG ALA A . n A 1 44 GLU 44 385 385 GLU GLU A . n A 1 45 ARG 45 386 386 ARG ARG A . n A 1 46 MSE 46 387 387 MSE MSE A . n A 1 47 SER 47 388 388 SER SER A . n A 1 48 GLN 48 389 389 GLN GLN A . n A 1 49 VAL 49 390 390 VAL VAL A . n A 1 50 MSE 50 391 391 MSE MSE A . n A 1 51 ARG 51 392 392 ARG ARG A . n A 1 52 GLU 52 393 393 GLU GLU A . n A 1 53 TRP 53 394 394 TRP TRP A . n A 1 54 GLU 54 395 395 GLU GLU A . n A 1 55 GLU 55 396 396 GLU GLU A . n A 1 56 ALA 56 397 397 ALA ALA A . n A 1 57 GLU 57 398 398 GLU GLU A . n A 1 58 ARG 58 399 399 ARG ALA A . n A 1 59 GLN 59 400 400 GLN ALA A . n A 1 60 ALA 60 401 401 ALA ALA A . n A 1 61 LYS 61 402 402 LYS ALA A . n A 1 62 ASN 62 403 403 ASN ALA A . n A 1 63 LEU 63 404 404 LEU LEU A . n A 1 64 PRO 64 405 405 PRO PRO A . n A 1 65 LYS 65 406 406 LYS ALA A . n A 1 66 ALA 66 407 407 ALA ALA A . n A 1 67 ASP 67 408 408 ASP ALA A . n A 1 68 LYS 68 409 409 LYS LYS A . n A 1 69 LYS 69 410 410 LYS LYS A . n A 1 70 ALA 70 411 411 ALA ALA A . n A 1 71 VAL 71 412 412 VAL VAL A . n A 1 72 ILE 72 413 413 ILE ILE A . n A 1 73 GLN 73 414 414 GLN GLN A . n A 1 74 HIS 74 415 415 HIS HIS A . n A 1 75 PHE 75 416 416 PHE PHE A . n A 1 76 GLN 76 417 417 GLN ALA A . n A 1 77 GLU 77 418 418 GLU ALA A . n A 1 78 LYS 78 419 419 LYS LYS A . n A 1 79 VAL 79 420 420 VAL VAL A . n A 1 80 GLU 80 421 421 GLU ALA A . n A 1 81 SER 81 422 422 SER SER A . n A 1 82 LEU 82 423 423 LEU LEU A . n A 1 83 GLU 83 424 424 GLU ALA A . n A 1 84 GLN 84 425 425 GLN ALA A . n A 1 85 GLU 85 426 426 GLU ALA A . n A 1 86 ALA 86 427 427 ALA ALA A . n A 1 87 ALA 87 428 428 ALA ALA A . n A 1 88 ASN 88 429 429 ASN ASN A . n A 1 89 GLU 89 430 430 GLU ALA A . n A 1 90 ARG 90 431 431 ARG ARG A . n A 1 91 GLN 91 432 432 GLN GLN A . n A 1 92 GLN 92 433 433 GLN ALA A . n A 1 93 LEU 93 434 434 LEU LEU A . n A 1 94 VAL 94 435 435 VAL VAL A . n A 1 95 GLU 95 436 436 GLU ALA A . n A 1 96 THR 96 437 437 THR THR A . n A 1 97 HIS 97 438 438 HIS HIS A . n A 1 98 MSE 98 439 439 MSE ALA A . n A 1 99 ALA 99 440 440 ALA ALA A . n A 1 100 ARG 100 441 441 ARG ARG A . n A 1 101 VAL 101 442 442 VAL VAL A . n A 1 102 GLU 102 443 443 GLU ALA A . n A 1 103 ALA 103 444 444 ALA ALA A . n A 1 104 MSE 104 445 445 MSE MSE A . n A 1 105 LEU 105 446 446 LEU LEU A . n A 1 106 ASN 106 447 447 ASN ASN A . n A 1 107 ASP 107 448 448 ASP ASP A . n A 1 108 ARG 108 449 449 ARG ALA A . n A 1 109 ARG 109 450 450 ARG ARG A . n A 1 110 ARG 110 451 451 ARG ALA A . n A 1 111 LEU 111 452 452 LEU ALA A . n A 1 112 ALA 112 453 453 ALA ALA A . n A 1 113 LEU 113 454 454 LEU ALA A . n A 1 114 GLU 114 455 455 GLU ALA A . n A 1 115 ASN 115 456 456 ASN ASN A . n A 1 116 TYR 116 457 457 TYR TYR A . n A 1 117 ILE 117 458 458 ILE ALA A . n A 1 118 THR 118 459 459 THR THR A . n A 1 119 ALA 119 460 460 ALA ALA A . n A 1 120 LEU 120 461 461 LEU ALA A . n A 1 121 GLN 121 462 462 GLN ALA A . n A 1 122 ALA 122 463 463 ALA ALA A . n A 1 123 VAL 123 464 464 VAL ALA A . n A 1 124 PRO 124 465 465 PRO PRO A . n A 1 125 PRO 125 466 466 PRO PRO A . n A 1 126 ARG 126 467 467 ARG ALA A . n A 1 127 PRO 127 468 468 PRO PRO A . n A 1 128 ARG 128 469 469 ARG ARG A . n A 1 129 HIS 129 470 470 HIS HIS A . n A 1 130 VAL 130 471 471 VAL ALA A . n A 1 131 PHE 131 472 472 PHE ALA A . n A 1 132 ASN 132 473 473 ASN ALA A . n A 1 133 MSE 133 474 474 MSE MSE A . n A 1 134 LEU 134 475 475 LEU ALA A . n A 1 135 LYS 135 476 476 LYS ALA A . n A 1 136 LYS 136 477 477 LYS ALA A . n A 1 137 TYR 137 478 478 TYR TYR A . n A 1 138 VAL 138 479 479 VAL VAL A . n A 1 139 ARG 139 480 480 ARG ARG A . n A 1 140 ALA 140 481 481 ALA ALA A . n A 1 141 GLU 141 482 482 GLU GLU A . n A 1 142 GLN 142 483 483 GLN GLN A . n A 1 143 LYS 143 484 484 LYS ALA A . n A 1 144 ASP 144 485 485 ASP ASP A . n A 1 145 ARG 145 486 486 ARG ARG A . n A 1 146 GLN 146 487 487 GLN GLN A . n A 1 147 HIS 147 488 488 HIS HIS A . n A 1 148 THR 148 489 489 THR THR A . n A 1 149 LEU 149 490 490 LEU LEU A . n A 1 150 LYS 150 491 491 LYS ALA A . n A 1 151 HIS 151 492 492 HIS HIS A . n A 1 152 PHE 152 493 493 PHE PHE A . n A 1 153 GLU 153 494 494 GLU ALA A . n A 1 154 HIS 154 495 495 HIS HIS A . n A 1 155 VAL 155 496 496 VAL ALA A . n A 1 156 ARG 156 497 497 ARG ARG A . n A 1 157 MSE 157 498 498 MSE ALA A . n A 1 158 VAL 158 499 499 VAL ALA A . n A 1 159 ASP 159 500 500 ASP ALA A . n A 1 160 PRO 160 501 501 PRO PRO A . n A 1 161 LYS 161 502 502 LYS ALA A . n A 1 162 LYS 162 503 503 LYS ALA A . n A 1 163 ALA 163 504 504 ALA ALA A . n A 1 164 ALA 164 505 505 ALA ALA A . n A 1 165 GLN 165 506 506 GLN GLN A . n A 1 166 ILE 166 507 507 ILE ALA A . n A 1 167 ARG 167 508 508 ARG ALA A . n A 1 168 SER 168 509 509 SER ALA A . n A 1 169 GLN 169 510 510 GLN GLN A . n A 1 170 VAL 170 511 511 VAL ALA A . n A 1 171 MSE 171 512 512 MSE MSE A . n A 1 172 THR 172 513 513 THR THR A . n A 1 173 HIS 173 514 514 HIS HIS A . n A 1 174 LEU 174 515 515 LEU LEU A . n A 1 175 ARG 175 516 516 ARG ARG A . n A 1 176 VAL 176 517 517 VAL VAL A . n A 1 177 ILE 177 518 518 ILE ILE A . n A 1 178 TYR 178 519 519 TYR TYR A . n A 1 179 GLU 179 520 520 GLU ALA A . n A 1 180 ARG 180 521 521 ARG ARG A . n A 1 181 MSE 181 522 522 MSE MSE A . n A 1 182 ASN 182 523 523 ASN ASN A . n A 1 183 GLN 183 524 524 GLN ALA A . n A 1 184 SER 184 525 525 SER SER A . n A 1 185 LEU 185 526 526 LEU LEU A . n A 1 186 SER 186 527 527 SER SER A . n A 1 187 LEU 187 528 528 LEU LEU A . n A 1 188 LEU 188 529 529 LEU LEU A . n A 1 189 TYR 189 530 530 TYR ALA A . n A 1 190 ASN 190 531 531 ASN ALA A . n A 1 191 VAL 191 532 532 VAL ALA A . n A 1 192 PRO 192 533 533 PRO PRO A . n A 1 193 ALA 193 534 534 ALA ALA A . n A 1 194 VAL 194 535 535 VAL VAL A . n A 1 195 ALA 195 536 536 ALA ALA A . n A 1 196 GLU 196 537 537 GLU ALA A . n A 1 197 GLU 197 538 538 GLU ALA A . n A 1 198 ILE 198 539 539 ILE ALA A . n A 1 199 GLN 199 540 540 GLN ALA A . n A 1 200 ASP 200 541 ? ? ? A . n A 1 201 GLU 201 542 ? ? ? A . n A 1 202 VAL 202 543 ? ? ? A . n A 1 203 ASP 203 544 ? ? ? A . n A 1 204 GLU 204 545 ? ? ? A . n A 1 205 LEU 205 546 ? ? ? A . n A 1 206 LEU 206 547 ? ? ? A . n A 1 207 GLN 207 548 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OS 1 1 1 OS OS A . C 3 HOH 1 2 2 HOH HOH A . C 3 HOH 2 3 3 HOH HOH A . C 3 HOH 3 4 4 HOH HOH A . C 3 HOH 4 5 5 HOH HOH A . C 3 HOH 5 6 6 HOH HOH A . C 3 HOH 6 7 7 HOH HOH A . C 3 HOH 7 8 8 HOH HOH A . C 3 HOH 8 9 9 HOH HOH A . C 3 HOH 9 10 10 HOH HOH A . C 3 HOH 10 11 11 HOH HOH A . C 3 HOH 11 12 12 HOH HOH A . C 3 HOH 12 13 13 HOH HOH A . C 3 HOH 13 14 14 HOH HOH A . C 3 HOH 14 15 15 HOH HOH A . C 3 HOH 15 16 16 HOH HOH A . C 3 HOH 16 17 17 HOH HOH A . C 3 HOH 17 18 18 HOH HOH A . C 3 HOH 18 19 19 HOH HOH A . C 3 HOH 19 20 20 HOH HOH A . C 3 HOH 20 21 21 HOH HOH A . C 3 HOH 21 22 22 HOH HOH A . C 3 HOH 22 23 23 HOH HOH A . C 3 HOH 23 24 24 HOH HOH A . C 3 HOH 24 25 25 HOH HOH A . C 3 HOH 25 26 26 HOH HOH A . C 3 HOH 26 27 27 HOH HOH A . C 3 HOH 27 28 28 HOH HOH A . C 3 HOH 28 29 29 HOH HOH A . C 3 HOH 29 30 30 HOH HOH A . C 3 HOH 30 31 31 HOH HOH A . C 3 HOH 31 32 32 HOH HOH A . C 3 HOH 32 33 33 HOH HOH A . C 3 HOH 33 34 34 HOH HOH A . C 3 HOH 34 35 35 HOH HOH A . C 3 HOH 35 36 36 HOH HOH A . C 3 HOH 36 549 1 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LEU 360 ? CG ? A LEU 19 CG 2 1 Y 1 A LEU 360 ? CD1 ? A LEU 19 CD1 3 1 Y 1 A LEU 360 ? CD2 ? A LEU 19 CD2 4 1 Y 1 A GLU 361 ? CG ? A GLU 20 CG 5 1 Y 1 A GLU 361 ? CD ? A GLU 20 CD 6 1 Y 1 A GLU 361 ? OE1 ? A GLU 20 OE1 7 1 Y 1 A GLU 361 ? OE2 ? A GLU 20 OE2 8 1 Y 1 A THR 362 ? OG1 ? A THR 21 OG1 9 1 Y 1 A THR 362 ? CG2 ? A THR 21 CG2 10 1 Y 1 A HIS 371 ? CG ? A HIS 30 CG 11 1 Y 1 A HIS 371 ? ND1 ? A HIS 30 ND1 12 1 Y 1 A HIS 371 ? CD2 ? A HIS 30 CD2 13 1 Y 1 A HIS 371 ? CE1 ? A HIS 30 CE1 14 1 Y 1 A HIS 371 ? NE2 ? A HIS 30 NE2 15 1 Y 1 A GLN 373 ? CG ? A GLN 32 CG 16 1 Y 1 A GLN 373 ? CD ? A GLN 32 CD 17 1 Y 1 A GLN 373 ? OE1 ? A GLN 32 OE1 18 1 Y 1 A GLN 373 ? NE2 ? A GLN 32 NE2 19 1 Y 1 A LYS 374 ? CD ? A LYS 33 CD 20 1 Y 1 A LYS 374 ? CE ? A LYS 33 CE 21 1 Y 1 A LYS 374 ? NZ ? A LYS 33 NZ 22 1 Y 1 A GLU 377 ? CG ? A GLU 36 CG 23 1 Y 1 A GLU 377 ? CD ? A GLU 36 CD 24 1 Y 1 A GLU 377 ? OE1 ? A GLU 36 OE1 25 1 Y 1 A GLU 377 ? OE2 ? A GLU 36 OE2 26 1 Y 1 A GLU 380 ? CG ? A GLU 39 CG 27 1 Y 1 A GLU 380 ? CD ? A GLU 39 CD 28 1 Y 1 A GLU 380 ? OE1 ? A GLU 39 OE1 29 1 Y 1 A GLU 380 ? OE2 ? A GLU 39 OE2 30 1 Y 1 A LYS 382 ? CD ? A LYS 41 CD 31 1 Y 1 A LYS 382 ? CE ? A LYS 41 CE 32 1 Y 1 A LYS 382 ? NZ ? A LYS 41 NZ 33 1 Y 1 A HIS 383 ? CG ? A HIS 42 CG 34 1 Y 1 A HIS 383 ? ND1 ? A HIS 42 ND1 35 1 Y 1 A HIS 383 ? CD2 ? A HIS 42 CD2 36 1 Y 1 A HIS 383 ? CE1 ? A HIS 42 CE1 37 1 Y 1 A HIS 383 ? NE2 ? A HIS 42 NE2 38 1 Y 1 A ARG 384 ? CG ? A ARG 43 CG 39 1 Y 1 A ARG 384 ? CD ? A ARG 43 CD 40 1 Y 1 A ARG 384 ? NE ? A ARG 43 NE 41 1 Y 1 A ARG 384 ? CZ ? A ARG 43 CZ 42 1 Y 1 A ARG 384 ? NH1 ? A ARG 43 NH1 43 1 Y 1 A ARG 384 ? NH2 ? A ARG 43 NH2 44 1 Y 1 A ARG 386 ? CD ? A ARG 45 CD 45 1 Y 1 A ARG 386 ? NE ? A ARG 45 NE 46 1 Y 1 A ARG 386 ? CZ ? A ARG 45 CZ 47 1 Y 1 A ARG 386 ? NH1 ? A ARG 45 NH1 48 1 Y 1 A ARG 386 ? NH2 ? A ARG 45 NH2 49 1 Y 1 A ARG 392 ? CD ? A ARG 51 CD 50 1 Y 1 A ARG 392 ? NE ? A ARG 51 NE 51 1 Y 1 A ARG 392 ? CZ ? A ARG 51 CZ 52 1 Y 1 A ARG 392 ? NH1 ? A ARG 51 NH1 53 1 Y 1 A ARG 392 ? NH2 ? A ARG 51 NH2 54 1 Y 1 A ARG 399 ? CG ? A ARG 58 CG 55 1 Y 1 A ARG 399 ? CD ? A ARG 58 CD 56 1 Y 1 A ARG 399 ? NE ? A ARG 58 NE 57 1 Y 1 A ARG 399 ? CZ ? A ARG 58 CZ 58 1 Y 1 A ARG 399 ? NH1 ? A ARG 58 NH1 59 1 Y 1 A ARG 399 ? NH2 ? A ARG 58 NH2 60 1 Y 1 A GLN 400 ? CG ? A GLN 59 CG 61 1 Y 1 A GLN 400 ? CD ? A GLN 59 CD 62 1 Y 1 A GLN 400 ? OE1 ? A GLN 59 OE1 63 1 Y 1 A GLN 400 ? NE2 ? A GLN 59 NE2 64 1 Y 1 A LYS 402 ? CG ? A LYS 61 CG 65 1 Y 1 A LYS 402 ? CD ? A LYS 61 CD 66 1 Y 1 A LYS 402 ? CE ? A LYS 61 CE 67 1 Y 1 A LYS 402 ? NZ ? A LYS 61 NZ 68 1 Y 1 A ASN 403 ? CG ? A ASN 62 CG 69 1 Y 1 A ASN 403 ? OD1 ? A ASN 62 OD1 70 1 Y 1 A ASN 403 ? ND2 ? A ASN 62 ND2 71 1 Y 1 A LYS 406 ? CG ? A LYS 65 CG 72 1 Y 1 A LYS 406 ? CD ? A LYS 65 CD 73 1 Y 1 A LYS 406 ? CE ? A LYS 65 CE 74 1 Y 1 A LYS 406 ? NZ ? A LYS 65 NZ 75 1 Y 1 A ASP 408 ? CG ? A ASP 67 CG 76 1 Y 1 A ASP 408 ? OD1 ? A ASP 67 OD1 77 1 Y 1 A ASP 408 ? OD2 ? A ASP 67 OD2 78 1 Y 1 A LYS 409 ? CD ? A LYS 68 CD 79 1 Y 1 A LYS 409 ? CE ? A LYS 68 CE 80 1 Y 1 A LYS 409 ? NZ ? A LYS 68 NZ 81 1 Y 1 A LYS 410 ? CD ? A LYS 69 CD 82 1 Y 1 A LYS 410 ? CE ? A LYS 69 CE 83 1 Y 1 A LYS 410 ? NZ ? A LYS 69 NZ 84 1 Y 1 A GLN 417 ? CG ? A GLN 76 CG 85 1 Y 1 A GLN 417 ? CD ? A GLN 76 CD 86 1 Y 1 A GLN 417 ? OE1 ? A GLN 76 OE1 87 1 Y 1 A GLN 417 ? NE2 ? A GLN 76 NE2 88 1 Y 1 A GLU 418 ? CG ? A GLU 77 CG 89 1 Y 1 A GLU 418 ? CD ? A GLU 77 CD 90 1 Y 1 A GLU 418 ? OE1 ? A GLU 77 OE1 91 1 Y 1 A GLU 418 ? OE2 ? A GLU 77 OE2 92 1 Y 1 A GLU 421 ? CG ? A GLU 80 CG 93 1 Y 1 A GLU 421 ? CD ? A GLU 80 CD 94 1 Y 1 A GLU 421 ? OE1 ? A GLU 80 OE1 95 1 Y 1 A GLU 421 ? OE2 ? A GLU 80 OE2 96 1 Y 1 A GLU 424 ? CG ? A GLU 83 CG 97 1 Y 1 A GLU 424 ? CD ? A GLU 83 CD 98 1 Y 1 A GLU 424 ? OE1 ? A GLU 83 OE1 99 1 Y 1 A GLU 424 ? OE2 ? A GLU 83 OE2 100 1 Y 1 A GLN 425 ? CG ? A GLN 84 CG 101 1 Y 1 A GLN 425 ? CD ? A GLN 84 CD 102 1 Y 1 A GLN 425 ? OE1 ? A GLN 84 OE1 103 1 Y 1 A GLN 425 ? NE2 ? A GLN 84 NE2 104 1 Y 1 A GLU 426 ? CG ? A GLU 85 CG 105 1 Y 1 A GLU 426 ? CD ? A GLU 85 CD 106 1 Y 1 A GLU 426 ? OE1 ? A GLU 85 OE1 107 1 Y 1 A GLU 426 ? OE2 ? A GLU 85 OE2 108 1 Y 1 A GLU 430 ? CG ? A GLU 89 CG 109 1 Y 1 A GLU 430 ? CD ? A GLU 89 CD 110 1 Y 1 A GLU 430 ? OE1 ? A GLU 89 OE1 111 1 Y 1 A GLU 430 ? OE2 ? A GLU 89 OE2 112 1 Y 1 A GLN 433 ? CG ? A GLN 92 CG 113 1 Y 1 A GLN 433 ? CD ? A GLN 92 CD 114 1 Y 1 A GLN 433 ? OE1 ? A GLN 92 OE1 115 1 Y 1 A GLN 433 ? NE2 ? A GLN 92 NE2 116 1 Y 1 A GLU 436 ? CG ? A GLU 95 CG 117 1 Y 1 A GLU 436 ? CD ? A GLU 95 CD 118 1 Y 1 A GLU 436 ? OE1 ? A GLU 95 OE1 119 1 Y 1 A GLU 436 ? OE2 ? A GLU 95 OE2 120 1 Y 1 A MSE 439 ? CG ? A MSE 98 CG 121 1 Y 1 A MSE 439 ? SE ? A MSE 98 SE 122 1 Y 1 A MSE 439 ? CE ? A MSE 98 CE 123 1 Y 1 A GLU 443 ? CG ? A GLU 102 CG 124 1 Y 1 A GLU 443 ? CD ? A GLU 102 CD 125 1 Y 1 A GLU 443 ? OE1 ? A GLU 102 OE1 126 1 Y 1 A GLU 443 ? OE2 ? A GLU 102 OE2 127 1 Y 1 A ARG 449 ? CG ? A ARG 108 CG 128 1 Y 1 A ARG 449 ? CD ? A ARG 108 CD 129 1 Y 1 A ARG 449 ? NE ? A ARG 108 NE 130 1 Y 1 A ARG 449 ? CZ ? A ARG 108 CZ 131 1 Y 1 A ARG 449 ? NH1 ? A ARG 108 NH1 132 1 Y 1 A ARG 449 ? NH2 ? A ARG 108 NH2 133 1 Y 1 A ARG 451 ? CG ? A ARG 110 CG 134 1 Y 1 A ARG 451 ? CD ? A ARG 110 CD 135 1 Y 1 A ARG 451 ? NE ? A ARG 110 NE 136 1 Y 1 A ARG 451 ? CZ ? A ARG 110 CZ 137 1 Y 1 A ARG 451 ? NH1 ? A ARG 110 NH1 138 1 Y 1 A ARG 451 ? NH2 ? A ARG 110 NH2 139 1 Y 1 A LEU 452 ? CG ? A LEU 111 CG 140 1 Y 1 A LEU 452 ? CD1 ? A LEU 111 CD1 141 1 Y 1 A LEU 452 ? CD2 ? A LEU 111 CD2 142 1 Y 1 A LEU 454 ? CG ? A LEU 113 CG 143 1 Y 1 A LEU 454 ? CD1 ? A LEU 113 CD1 144 1 Y 1 A LEU 454 ? CD2 ? A LEU 113 CD2 145 1 Y 1 A GLU 455 ? CG ? A GLU 114 CG 146 1 Y 1 A GLU 455 ? CD ? A GLU 114 CD 147 1 Y 1 A GLU 455 ? OE1 ? A GLU 114 OE1 148 1 Y 1 A GLU 455 ? OE2 ? A GLU 114 OE2 149 1 Y 1 A ILE 458 ? CG1 ? A ILE 117 CG1 150 1 Y 1 A ILE 458 ? CG2 ? A ILE 117 CG2 151 1 Y 1 A ILE 458 ? CD1 ? A ILE 117 CD1 152 1 Y 1 A LEU 461 ? CG ? A LEU 120 CG 153 1 Y 1 A LEU 461 ? CD1 ? A LEU 120 CD1 154 1 Y 1 A LEU 461 ? CD2 ? A LEU 120 CD2 155 1 Y 1 A GLN 462 ? CG ? A GLN 121 CG 156 1 Y 1 A GLN 462 ? CD ? A GLN 121 CD 157 1 Y 1 A GLN 462 ? OE1 ? A GLN 121 OE1 158 1 Y 1 A GLN 462 ? NE2 ? A GLN 121 NE2 159 1 Y 1 A VAL 464 ? CG1 ? A VAL 123 CG1 160 1 Y 1 A VAL 464 ? CG2 ? A VAL 123 CG2 161 1 Y 1 A ARG 467 ? CG ? A ARG 126 CG 162 1 Y 1 A ARG 467 ? CD ? A ARG 126 CD 163 1 Y 1 A ARG 467 ? NE ? A ARG 126 NE 164 1 Y 1 A ARG 467 ? CZ ? A ARG 126 CZ 165 1 Y 1 A ARG 467 ? NH1 ? A ARG 126 NH1 166 1 Y 1 A ARG 467 ? NH2 ? A ARG 126 NH2 167 1 Y 1 A HIS 470 ? ND1 ? A HIS 129 ND1 168 1 Y 1 A HIS 470 ? CD2 ? A HIS 129 CD2 169 1 Y 1 A HIS 470 ? CE1 ? A HIS 129 CE1 170 1 Y 1 A HIS 470 ? NE2 ? A HIS 129 NE2 171 1 Y 1 A VAL 471 ? CG1 ? A VAL 130 CG1 172 1 Y 1 A VAL 471 ? CG2 ? A VAL 130 CG2 173 1 Y 1 A PHE 472 ? CG ? A PHE 131 CG 174 1 Y 1 A PHE 472 ? CD1 ? A PHE 131 CD1 175 1 Y 1 A PHE 472 ? CD2 ? A PHE 131 CD2 176 1 Y 1 A PHE 472 ? CE1 ? A PHE 131 CE1 177 1 Y 1 A PHE 472 ? CE2 ? A PHE 131 CE2 178 1 Y 1 A PHE 472 ? CZ ? A PHE 131 CZ 179 1 Y 1 A ASN 473 ? CG ? A ASN 132 CG 180 1 Y 1 A ASN 473 ? OD1 ? A ASN 132 OD1 181 1 Y 1 A ASN 473 ? ND2 ? A ASN 132 ND2 182 1 Y 1 A LEU 475 ? CG ? A LEU 134 CG 183 1 Y 1 A LEU 475 ? CD1 ? A LEU 134 CD1 184 1 Y 1 A LEU 475 ? CD2 ? A LEU 134 CD2 185 1 Y 1 A LYS 476 ? CG ? A LYS 135 CG 186 1 Y 1 A LYS 476 ? CD ? A LYS 135 CD 187 1 Y 1 A LYS 476 ? CE ? A LYS 135 CE 188 1 Y 1 A LYS 476 ? NZ ? A LYS 135 NZ 189 1 Y 1 A LYS 477 ? CG ? A LYS 136 CG 190 1 Y 1 A LYS 477 ? CD ? A LYS 136 CD 191 1 Y 1 A LYS 477 ? CE ? A LYS 136 CE 192 1 Y 1 A LYS 477 ? NZ ? A LYS 136 NZ 193 1 Y 1 A LYS 484 ? CG ? A LYS 143 CG 194 1 Y 1 A LYS 484 ? CD ? A LYS 143 CD 195 1 Y 1 A LYS 484 ? CE ? A LYS 143 CE 196 1 Y 1 A LYS 484 ? NZ ? A LYS 143 NZ 197 1 Y 1 A LYS 491 ? CG ? A LYS 150 CG 198 1 Y 1 A LYS 491 ? CD ? A LYS 150 CD 199 1 Y 1 A LYS 491 ? CE ? A LYS 150 CE 200 1 Y 1 A LYS 491 ? NZ ? A LYS 150 NZ 201 1 Y 1 A PHE 493 ? CD1 ? A PHE 152 CD1 202 1 Y 1 A PHE 493 ? CD2 ? A PHE 152 CD2 203 1 Y 1 A PHE 493 ? CE1 ? A PHE 152 CE1 204 1 Y 1 A PHE 493 ? CE2 ? A PHE 152 CE2 205 1 Y 1 A PHE 493 ? CZ ? A PHE 152 CZ 206 1 Y 1 A GLU 494 ? CG ? A GLU 153 CG 207 1 Y 1 A GLU 494 ? CD ? A GLU 153 CD 208 1 Y 1 A GLU 494 ? OE1 ? A GLU 153 OE1 209 1 Y 1 A GLU 494 ? OE2 ? A GLU 153 OE2 210 1 Y 1 A HIS 495 ? ND1 ? A HIS 154 ND1 211 1 Y 1 A HIS 495 ? CD2 ? A HIS 154 CD2 212 1 Y 1 A HIS 495 ? CE1 ? A HIS 154 CE1 213 1 Y 1 A HIS 495 ? NE2 ? A HIS 154 NE2 214 1 Y 1 A VAL 496 ? CG1 ? A VAL 155 CG1 215 1 Y 1 A VAL 496 ? CG2 ? A VAL 155 CG2 216 1 Y 1 A MSE 498 ? CG ? A MSE 157 CG 217 1 Y 1 A MSE 498 ? SE ? A MSE 157 SE 218 1 Y 1 A MSE 498 ? CE ? A MSE 157 CE 219 1 Y 1 A VAL 499 ? CG1 ? A VAL 158 CG1 220 1 Y 1 A VAL 499 ? CG2 ? A VAL 158 CG2 221 1 Y 1 A ASP 500 ? CG ? A ASP 159 CG 222 1 Y 1 A ASP 500 ? OD1 ? A ASP 159 OD1 223 1 Y 1 A ASP 500 ? OD2 ? A ASP 159 OD2 224 1 Y 1 A LYS 502 ? CG ? A LYS 161 CG 225 1 Y 1 A LYS 502 ? CD ? A LYS 161 CD 226 1 Y 1 A LYS 502 ? CE ? A LYS 161 CE 227 1 Y 1 A LYS 502 ? NZ ? A LYS 161 NZ 228 1 Y 1 A LYS 503 ? CG ? A LYS 162 CG 229 1 Y 1 A LYS 503 ? CD ? A LYS 162 CD 230 1 Y 1 A LYS 503 ? CE ? A LYS 162 CE 231 1 Y 1 A LYS 503 ? NZ ? A LYS 162 NZ 232 1 Y 1 A ILE 507 ? CG1 ? A ILE 166 CG1 233 1 Y 1 A ILE 507 ? CG2 ? A ILE 166 CG2 234 1 Y 1 A ILE 507 ? CD1 ? A ILE 166 CD1 235 1 Y 1 A ARG 508 ? CG ? A ARG 167 CG 236 1 Y 1 A ARG 508 ? CD ? A ARG 167 CD 237 1 Y 1 A ARG 508 ? NE ? A ARG 167 NE 238 1 Y 1 A ARG 508 ? CZ ? A ARG 167 CZ 239 1 Y 1 A ARG 508 ? NH1 ? A ARG 167 NH1 240 1 Y 1 A ARG 508 ? NH2 ? A ARG 167 NH2 241 1 Y 1 A SER 509 ? OG ? A SER 168 OG 242 1 Y 1 A VAL 511 ? CG1 ? A VAL 170 CG1 243 1 Y 1 A VAL 511 ? CG2 ? A VAL 170 CG2 244 1 Y 1 A LEU 515 ? CD1 ? A LEU 174 CD1 245 1 Y 1 A LEU 515 ? CD2 ? A LEU 174 CD2 246 1 Y 1 A ARG 516 ? CD ? A ARG 175 CD 247 1 Y 1 A ARG 516 ? NE ? A ARG 175 NE 248 1 Y 1 A ARG 516 ? CZ ? A ARG 175 CZ 249 1 Y 1 A ARG 516 ? NH1 ? A ARG 175 NH1 250 1 Y 1 A ARG 516 ? NH2 ? A ARG 175 NH2 251 1 Y 1 A GLU 520 ? CG ? A GLU 179 CG 252 1 Y 1 A GLU 520 ? CD ? A GLU 179 CD 253 1 Y 1 A GLU 520 ? OE1 ? A GLU 179 OE1 254 1 Y 1 A GLU 520 ? OE2 ? A GLU 179 OE2 255 1 Y 1 A GLN 524 ? CG ? A GLN 183 CG 256 1 Y 1 A GLN 524 ? CD ? A GLN 183 CD 257 1 Y 1 A GLN 524 ? OE1 ? A GLN 183 OE1 258 1 Y 1 A GLN 524 ? NE2 ? A GLN 183 NE2 259 1 Y 1 A TYR 530 ? CG ? A TYR 189 CG 260 1 Y 1 A TYR 530 ? CD1 ? A TYR 189 CD1 261 1 Y 1 A TYR 530 ? CD2 ? A TYR 189 CD2 262 1 Y 1 A TYR 530 ? CE1 ? A TYR 189 CE1 263 1 Y 1 A TYR 530 ? CE2 ? A TYR 189 CE2 264 1 Y 1 A TYR 530 ? CZ ? A TYR 189 CZ 265 1 Y 1 A TYR 530 ? OH ? A TYR 189 OH 266 1 Y 1 A ASN 531 ? CG ? A ASN 190 CG 267 1 Y 1 A ASN 531 ? OD1 ? A ASN 190 OD1 268 1 Y 1 A ASN 531 ? ND2 ? A ASN 190 ND2 269 1 Y 1 A VAL 532 ? CG1 ? A VAL 191 CG1 270 1 Y 1 A VAL 532 ? CG2 ? A VAL 191 CG2 271 1 Y 1 A GLU 537 ? CG ? A GLU 196 CG 272 1 Y 1 A GLU 537 ? CD ? A GLU 196 CD 273 1 Y 1 A GLU 537 ? OE1 ? A GLU 196 OE1 274 1 Y 1 A GLU 537 ? OE2 ? A GLU 196 OE2 275 1 Y 1 A GLU 538 ? CG ? A GLU 197 CG 276 1 Y 1 A GLU 538 ? CD ? A GLU 197 CD 277 1 Y 1 A GLU 538 ? OE1 ? A GLU 197 OE1 278 1 Y 1 A GLU 538 ? OE2 ? A GLU 197 OE2 279 1 Y 1 A ILE 539 ? CG1 ? A ILE 198 CG1 280 1 Y 1 A ILE 539 ? CG2 ? A ILE 198 CG2 281 1 Y 1 A ILE 539 ? CD1 ? A ILE 198 CD1 282 1 Y 1 A GLN 540 ? CG ? A GLN 199 CG 283 1 Y 1 A GLN 540 ? CD ? A GLN 199 CD 284 1 Y 1 A GLN 540 ? OE1 ? A GLN 199 OE1 285 1 Y 1 A GLN 540 ? NE2 ? A GLN 199 NE2 # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 2 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 DM . ? program 'Kevin Cowtan' kowtan@ysbl.york.ac.uk phasing http://www.ccp4.ac.uk/dist/html/dm.html Fortran_77 ? 4 REFMAC 5.5.0109 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 5 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 CBASS . ? ? ? ? 'data collection' ? ? ? 7 DENZO . ? ? ? ? 'data reduction' ? ? ? # _cell.length_a 114.979 _cell.length_b 40.149 _cell.length_c 58.376 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3NYJ _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.entry_id 3NYJ _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 18 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 3NYJ _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.72 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 54.77 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details '20% PEG 4000, 20% isopropanol, 0.1M Na Citrate, pH 5.6, vapor diffusion, temperature 298K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2010-04-12 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.14 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X29A' _diffrn_source.pdbx_wavelength_list 1.14 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X29A # _reflns.entry_id 3NYJ _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 3.2 _reflns.d_resolution_low 40.0 _reflns.number_all 4888 _reflns.number_obs 4888 _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs 0.081 _reflns.pdbx_Rsym_value 0.081 _reflns.pdbx_netI_over_sigmaI 14 _reflns.B_iso_Wilson_estimate 102 _reflns.pdbx_redundancy 13 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 3.2 _reflns_shell.d_res_low 3.31 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.368 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.number_unique_all 482 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3NYJ _refine.ls_d_res_high 3.2000 _refine.ls_d_res_low 40 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 100 _refine.ls_number_reflns_obs 4888 _refine.ls_number_reflns_all 4888 _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all 0.306 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.2974 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.3797 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 515 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 68.1372 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.solvent_model_details ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 229.340 _refine.B_iso_min 2.000 _refine.occupancy_max 1.000 _refine.occupancy_min 0.100 _refine.pdbx_ls_sigma_I 0 _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1226 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 36 _refine_hist.number_atoms_total 1263 _refine_hist.d_res_high 3.2000 _refine_hist.d_res_low 40 # _struct.entry_id 3NYJ _struct.title 'Crystal Structure Analysis of APP E2 domain' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3NYJ _struct_keywords.text ;Alzheimer's disease, helical hairpin, PROTEIN FIBRIL ; _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A4_HUMAN _struct_ref.pdbx_db_accession P05067 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQ EAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAA QIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQ ; _struct_ref.pdbx_align_begin 365 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3NYJ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 207 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P05067 _struct_ref_seq.db_align_beg 365 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 567 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 346 _struct_ref_seq.pdbx_auth_seq_align_end 548 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3NYJ GLY A 1 ? UNP P05067 ? ? 'expression tag' 342 1 1 3NYJ SER A 2 ? UNP P05067 ? ? 'expression tag' 343 2 1 3NYJ HIS A 3 ? UNP P05067 ? ? 'expression tag' 344 3 1 3NYJ MSE A 4 ? UNP P05067 ? ? 'expression tag' 345 4 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1830 ? 1 MORE -26 ? 1 'SSA (A^2)' 22590 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_455 -x-1,-y,z -1.0000000000 0.0000000000 0.0000000000 -114.9790000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 26 ? ARG A 58 ? ASN A 367 ARG A 399 1 ? 33 HELX_P HELX_P2 2 PRO A 64 ? THR A 118 ? PRO A 405 THR A 459 1 ? 55 HELX_P HELX_P3 3 ARG A 126 ? ASP A 159 ? ARG A 467 ASP A 500 1 ? 34 HELX_P HELX_P4 4 ASP A 159 ? SER A 186 ? ASP A 500 SER A 527 1 ? 28 HELX_P HELX_P5 5 LEU A 187 ? VAL A 191 ? LEU A 528 VAL A 532 5 ? 5 HELX_P HELX_P6 6 PRO A 192 ? GLN A 199 ? PRO A 533 GLN A 540 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ARG 45 C ? ? ? 1_555 A MSE 46 N ? ? A ARG 386 A MSE 387 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale2 covale both ? A MSE 46 C ? ? ? 1_555 A SER 47 N ? ? A MSE 387 A SER 388 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale3 covale both ? A VAL 49 C ? ? ? 1_555 A MSE 50 N ? ? A VAL 390 A MSE 391 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale4 covale both ? A MSE 50 C ? ? ? 1_555 A ARG 51 N ? ? A MSE 391 A ARG 392 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale5 covale both ? A HIS 97 C ? ? ? 1_555 A MSE 98 N ? ? A HIS 438 A MSE 439 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale6 covale both ? A MSE 98 C ? ? ? 1_555 A ALA 99 N ? ? A MSE 439 A ALA 440 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale7 covale both ? A ALA 103 C ? ? ? 1_555 A MSE 104 N ? ? A ALA 444 A MSE 445 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale8 covale both ? A MSE 104 C ? ? ? 1_555 A LEU 105 N ? ? A MSE 445 A LEU 446 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale9 covale both ? A ASN 132 C ? ? ? 1_555 A MSE 133 N ? ? A ASN 473 A MSE 474 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale10 covale both ? A MSE 133 C ? ? ? 1_555 A LEU 134 N ? ? A MSE 474 A LEU 475 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale11 covale both ? A ARG 156 C ? ? ? 1_555 A MSE 157 N ? ? A ARG 497 A MSE 498 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale12 covale both ? A MSE 157 C ? ? ? 1_555 A VAL 158 N ? ? A MSE 498 A VAL 499 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale13 covale both ? A VAL 170 C ? ? ? 1_555 A MSE 171 N ? ? A VAL 511 A MSE 512 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale14 covale both ? A MSE 171 C ? ? ? 1_555 A THR 172 N ? ? A MSE 512 A THR 513 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale15 covale both ? A ARG 180 C ? ? ? 1_555 A MSE 181 N ? ? A ARG 521 A MSE 522 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale16 covale both ? A MSE 181 C ? ? ? 1_555 A ASN 182 N ? ? A MSE 522 A ASN 523 1_555 ? ? ? ? ? ? ? 1.325 ? ? metalc1 metalc ? ? B OS . OS ? ? ? 1_555 C HOH . O ? ? A OS 1 A HOH 4 1_555 ? ? ? ? ? ? ? 2.558 ? ? metalc2 metalc ? ? B OS . OS ? ? ? 1_555 C HOH . O ? ? A OS 1 A HOH 9 1_555 ? ? ? ? ? ? ? 2.473 ? ? metalc3 metalc ? ? B OS . OS ? ? ? 1_555 C HOH . O ? ? A OS 1 A HOH 27 1_555 ? ? ? ? ? ? ? 2.631 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? C HOH . ? A HOH 4 ? 1_555 OS ? B OS . ? A OS 1 ? 1_555 O ? C HOH . ? A HOH 9 ? 1_555 120.2 ? 2 O ? C HOH . ? A HOH 4 ? 1_555 OS ? B OS . ? A OS 1 ? 1_555 O ? C HOH . ? A HOH 27 ? 1_555 119.2 ? 3 O ? C HOH . ? A HOH 9 ? 1_555 OS ? B OS . ? A OS 1 ? 1_555 O ? C HOH . ? A HOH 27 ? 1_555 89.3 ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 MSE A 46 ? . . . . MSE A 387 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 2 MSE A 50 ? . . . . MSE A 391 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 3 MSE A 98 ? . . . . MSE A 439 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 4 MSE A 104 ? . . . . MSE A 445 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 5 MSE A 133 ? . . . . MSE A 474 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 6 MSE A 157 ? . . . . MSE A 498 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 7 MSE A 171 ? . . . . MSE A 512 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 8 MSE A 181 ? . . . . MSE A 522 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id OS _struct_site.pdbx_auth_seq_id 1 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 3 _struct_site.details 'BINDING SITE FOR RESIDUE OS A 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 HOH C . ? HOH A 4 . ? 1_555 ? 2 AC1 3 HOH C . ? HOH A 9 . ? 1_555 ? 3 AC1 3 HOH C . ? HOH A 27 . ? 1_555 ? # _pdbx_entry_details.entry_id 3NYJ _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 PRO _pdbx_validate_close_contact.auth_seq_id_1 465 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 N _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 ARG _pdbx_validate_close_contact.auth_seq_id_2 467 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.11 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C A THR 362 ? ? N A PRO 363 ? ? CA A PRO 363 ? ? 129.13 119.30 9.83 1.50 Y 2 1 C A VAL 464 ? ? N A PRO 465 ? ? CA A PRO 465 ? ? 110.25 119.30 -9.05 1.50 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 362 ? ? -130.65 -67.92 2 1 PRO A 363 ? ? 16.98 133.11 3 1 ASP A 365 ? ? -50.72 105.69 4 1 GLU A 366 ? ? -24.67 -77.88 5 1 ALA A 370 ? ? -52.66 -72.42 6 1 ARG A 399 ? ? -56.94 -3.53 7 1 ALA A 401 ? ? -67.70 9.65 8 1 PRO A 405 ? ? -47.98 163.42 9 1 ALA A 428 ? ? -49.88 -81.46 10 1 THR A 459 ? ? -59.99 -2.52 11 1 ALA A 460 ? ? 30.67 -124.92 12 1 LEU A 461 ? ? -159.78 49.97 13 1 ALA A 463 ? ? 166.45 157.99 14 1 VAL A 464 ? ? 9.16 -100.76 15 1 PRO A 466 ? ? -36.44 59.45 16 1 ARG A 467 ? ? 13.67 67.27 17 1 VAL A 479 ? ? -48.62 -78.07 18 1 ASP A 485 ? ? -58.46 -70.21 19 1 LYS A 491 ? ? -43.00 -72.08 20 1 HIS A 492 ? ? -29.66 -50.18 21 1 MSE A 498 ? ? -74.73 -94.92 22 1 VAL A 499 ? ? -20.60 -57.96 23 1 PRO A 501 ? ? -38.14 -37.96 24 1 ILE A 507 ? ? -64.97 6.19 25 1 HIS A 514 ? ? -49.45 -72.11 26 1 ARG A 521 ? ? -55.60 -70.87 27 1 MSE A 522 ? ? -32.41 -70.98 28 1 SER A 527 ? ? -67.50 13.22 29 1 ALA A 534 ? ? -45.61 -71.30 30 1 ALA A 536 ? ? -54.48 -84.81 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 46 A MSE 387 ? MET SELENOMETHIONINE 2 A MSE 50 A MSE 391 ? MET SELENOMETHIONINE 3 A MSE 98 A MSE 439 ? MET SELENOMETHIONINE 4 A MSE 104 A MSE 445 ? MET SELENOMETHIONINE 5 A MSE 133 A MSE 474 ? MET SELENOMETHIONINE 6 A MSE 157 A MSE 498 ? MET SELENOMETHIONINE 7 A MSE 171 A MSE 512 ? MET SELENOMETHIONINE 8 A MSE 181 A MSE 522 ? MET SELENOMETHIONINE # _phasing.method MR # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 342 ? A GLY 1 2 1 Y 1 A SER 343 ? A SER 2 3 1 Y 1 A HIS 344 ? A HIS 3 4 1 Y 1 A MSE 345 ? A MSE 4 5 1 Y 1 A PRO 346 ? A PRO 5 6 1 Y 1 A THR 347 ? A THR 6 7 1 Y 1 A THR 348 ? A THR 7 8 1 Y 1 A ALA 349 ? A ALA 8 9 1 Y 1 A ALA 350 ? A ALA 9 10 1 Y 1 A SER 351 ? A SER 10 11 1 Y 1 A THR 352 ? A THR 11 12 1 Y 1 A PRO 353 ? A PRO 12 13 1 Y 1 A ASP 354 ? A ASP 13 14 1 Y 1 A ALA 355 ? A ALA 14 15 1 Y 1 A VAL 356 ? A VAL 15 16 1 Y 1 A ASP 357 ? A ASP 16 17 1 Y 1 A LYS 358 ? A LYS 17 18 1 Y 1 A TYR 359 ? A TYR 18 19 1 Y 1 A ASP 541 ? A ASP 200 20 1 Y 1 A GLU 542 ? A GLU 201 21 1 Y 1 A VAL 543 ? A VAL 202 22 1 Y 1 A ASP 544 ? A ASP 203 23 1 Y 1 A GLU 545 ? A GLU 204 24 1 Y 1 A LEU 546 ? A LEU 205 25 1 Y 1 A LEU 547 ? A LEU 206 26 1 Y 1 A GLN 548 ? A GLN 207 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MSE N N N N 216 MSE CA C N S 217 MSE C C N N 218 MSE O O N N 219 MSE OXT O N N 220 MSE CB C N N 221 MSE CG C N N 222 MSE SE SE N N 223 MSE CE C N N 224 MSE H H N N 225 MSE H2 H N N 226 MSE HA H N N 227 MSE HXT H N N 228 MSE HB2 H N N 229 MSE HB3 H N N 230 MSE HG2 H N N 231 MSE HG3 H N N 232 MSE HE1 H N N 233 MSE HE2 H N N 234 MSE HE3 H N N 235 OS OS OS N N 236 PHE N N N N 237 PHE CA C N S 238 PHE C C N N 239 PHE O O N N 240 PHE CB C N N 241 PHE CG C Y N 242 PHE CD1 C Y N 243 PHE CD2 C Y N 244 PHE CE1 C Y N 245 PHE CE2 C Y N 246 PHE CZ C Y N 247 PHE OXT O N N 248 PHE H H N N 249 PHE H2 H N N 250 PHE HA H N N 251 PHE HB2 H N N 252 PHE HB3 H N N 253 PHE HD1 H N N 254 PHE HD2 H N N 255 PHE HE1 H N N 256 PHE HE2 H N N 257 PHE HZ H N N 258 PHE HXT H N N 259 PRO N N N N 260 PRO CA C N S 261 PRO C C N N 262 PRO O O N N 263 PRO CB C N N 264 PRO CG C N N 265 PRO CD C N N 266 PRO OXT O N N 267 PRO H H N N 268 PRO HA H N N 269 PRO HB2 H N N 270 PRO HB3 H N N 271 PRO HG2 H N N 272 PRO HG3 H N N 273 PRO HD2 H N N 274 PRO HD3 H N N 275 PRO HXT H N N 276 SER N N N N 277 SER CA C N S 278 SER C C N N 279 SER O O N N 280 SER CB C N N 281 SER OG O N N 282 SER OXT O N N 283 SER H H N N 284 SER H2 H N N 285 SER HA H N N 286 SER HB2 H N N 287 SER HB3 H N N 288 SER HG H N N 289 SER HXT H N N 290 THR N N N N 291 THR CA C N S 292 THR C C N N 293 THR O O N N 294 THR CB C N R 295 THR OG1 O N N 296 THR CG2 C N N 297 THR OXT O N N 298 THR H H N N 299 THR H2 H N N 300 THR HA H N N 301 THR HB H N N 302 THR HG1 H N N 303 THR HG21 H N N 304 THR HG22 H N N 305 THR HG23 H N N 306 THR HXT H N N 307 TRP N N N N 308 TRP CA C N S 309 TRP C C N N 310 TRP O O N N 311 TRP CB C N N 312 TRP CG C Y N 313 TRP CD1 C Y N 314 TRP CD2 C Y N 315 TRP NE1 N Y N 316 TRP CE2 C Y N 317 TRP CE3 C Y N 318 TRP CZ2 C Y N 319 TRP CZ3 C Y N 320 TRP CH2 C Y N 321 TRP OXT O N N 322 TRP H H N N 323 TRP H2 H N N 324 TRP HA H N N 325 TRP HB2 H N N 326 TRP HB3 H N N 327 TRP HD1 H N N 328 TRP HE1 H N N 329 TRP HE3 H N N 330 TRP HZ2 H N N 331 TRP HZ3 H N N 332 TRP HH2 H N N 333 TRP HXT H N N 334 TYR N N N N 335 TYR CA C N S 336 TYR C C N N 337 TYR O O N N 338 TYR CB C N N 339 TYR CG C Y N 340 TYR CD1 C Y N 341 TYR CD2 C Y N 342 TYR CE1 C Y N 343 TYR CE2 C Y N 344 TYR CZ C Y N 345 TYR OH O N N 346 TYR OXT O N N 347 TYR H H N N 348 TYR H2 H N N 349 TYR HA H N N 350 TYR HB2 H N N 351 TYR HB3 H N N 352 TYR HD1 H N N 353 TYR HD2 H N N 354 TYR HE1 H N N 355 TYR HE2 H N N 356 TYR HH H N N 357 TYR HXT H N N 358 VAL N N N N 359 VAL CA C N S 360 VAL C C N N 361 VAL O O N N 362 VAL CB C N N 363 VAL CG1 C N N 364 VAL CG2 C N N 365 VAL OXT O N N 366 VAL H H N N 367 VAL H2 H N N 368 VAL HA H N N 369 VAL HB H N N 370 VAL HG11 H N N 371 VAL HG12 H N N 372 VAL HG13 H N N 373 VAL HG21 H N N 374 VAL HG22 H N N 375 VAL HG23 H N N 376 VAL HXT H N N 377 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MSE N CA sing N N 205 MSE N H sing N N 206 MSE N H2 sing N N 207 MSE CA C sing N N 208 MSE CA CB sing N N 209 MSE CA HA sing N N 210 MSE C O doub N N 211 MSE C OXT sing N N 212 MSE OXT HXT sing N N 213 MSE CB CG sing N N 214 MSE CB HB2 sing N N 215 MSE CB HB3 sing N N 216 MSE CG SE sing N N 217 MSE CG HG2 sing N N 218 MSE CG HG3 sing N N 219 MSE SE CE sing N N 220 MSE CE HE1 sing N N 221 MSE CE HE2 sing N N 222 MSE CE HE3 sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 TRP N CA sing N N 293 TRP N H sing N N 294 TRP N H2 sing N N 295 TRP CA C sing N N 296 TRP CA CB sing N N 297 TRP CA HA sing N N 298 TRP C O doub N N 299 TRP C OXT sing N N 300 TRP CB CG sing N N 301 TRP CB HB2 sing N N 302 TRP CB HB3 sing N N 303 TRP CG CD1 doub Y N 304 TRP CG CD2 sing Y N 305 TRP CD1 NE1 sing Y N 306 TRP CD1 HD1 sing N N 307 TRP CD2 CE2 doub Y N 308 TRP CD2 CE3 sing Y N 309 TRP NE1 CE2 sing Y N 310 TRP NE1 HE1 sing N N 311 TRP CE2 CZ2 sing Y N 312 TRP CE3 CZ3 doub Y N 313 TRP CE3 HE3 sing N N 314 TRP CZ2 CH2 doub Y N 315 TRP CZ2 HZ2 sing N N 316 TRP CZ3 CH2 sing Y N 317 TRP CZ3 HZ3 sing N N 318 TRP CH2 HH2 sing N N 319 TRP OXT HXT sing N N 320 TYR N CA sing N N 321 TYR N H sing N N 322 TYR N H2 sing N N 323 TYR CA C sing N N 324 TYR CA CB sing N N 325 TYR CA HA sing N N 326 TYR C O doub N N 327 TYR C OXT sing N N 328 TYR CB CG sing N N 329 TYR CB HB2 sing N N 330 TYR CB HB3 sing N N 331 TYR CG CD1 doub Y N 332 TYR CG CD2 sing Y N 333 TYR CD1 CE1 sing Y N 334 TYR CD1 HD1 sing N N 335 TYR CD2 CE2 doub Y N 336 TYR CD2 HD2 sing N N 337 TYR CE1 CZ doub Y N 338 TYR CE1 HE1 sing N N 339 TYR CE2 CZ sing Y N 340 TYR CE2 HE2 sing N N 341 TYR CZ OH sing N N 342 TYR OH HH sing N N 343 TYR OXT HXT sing N N 344 VAL N CA sing N N 345 VAL N H sing N N 346 VAL N H2 sing N N 347 VAL CA C sing N N 348 VAL CA CB sing N N 349 VAL CA HA sing N N 350 VAL C O doub N N 351 VAL C OXT sing N N 352 VAL CB CG1 sing N N 353 VAL CB CG2 sing N N 354 VAL CB HB sing N N 355 VAL CG1 HG11 sing N N 356 VAL CG1 HG12 sing N N 357 VAL CG1 HG13 sing N N 358 VAL CG2 HG21 sing N N 359 VAL CG2 HG22 sing N N 360 VAL CG2 HG23 sing N N 361 VAL OXT HXT sing N N 362 # _atom_sites.entry_id 3NYJ _atom_sites.fract_transf_matrix[1][1] 0.008697 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024907 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017130 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O OS SE # loop_