data_3NYL # _entry.id 3NYL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3NYL pdb_00003nyl 10.2210/pdb3nyl/pdb RCSB RCSB060441 ? ? WWPDB D_1000060441 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-07-13 2 'Structure model' 1 1 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2011-07-13 _pdbx_database_PDB_obs_spr.pdb_id 3NYL _pdbx_database_PDB_obs_spr.replace_pdb_id 1RW6 _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.entry_id 3NYL _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-07-15 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1RW6 'An earlier and less refined version of the same structure' unspecified PDB 3NYJ 'Same protein, different space group.' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ha, Y.' 1 'Hu, J.' 2 'Lee, S.' 3 'Liu, X.' 4 'Wang, Y.' 5 # _citation.id primary _citation.title 'The X-ray structure of an antiparallel dimer of the human amyloid precursor protein E2 domain.' _citation.journal_abbrev Mol.Cell _citation.journal_volume 15 _citation.page_first 343 _citation.page_last 353 _citation.year 2004 _citation.journal_id_ASTM MOCEFL _citation.country US _citation.journal_id_ISSN 1097-2765 _citation.journal_id_CSD 2168 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15304215 _citation.pdbx_database_id_DOI 10.1016/j.molcel.2004.06.037 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wang, Y.' 1 ? primary 'Ha, Y.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Amyloid beta (A4) protein (Peptidase nexin-II, Alzheimer disease), isoform CRA_b' 24735.107 1 ? ? 'UNP residues 346-551' ? 2 water nat water 18.015 38 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVE SLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDP KKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQ ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVE SLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDP KKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 PRO n 1 6 THR n 1 7 THR n 1 8 ALA n 1 9 ALA n 1 10 SER n 1 11 THR n 1 12 PRO n 1 13 ASP n 1 14 ALA n 1 15 VAL n 1 16 ASP n 1 17 LYS n 1 18 TYR n 1 19 LEU n 1 20 GLU n 1 21 THR n 1 22 PRO n 1 23 GLY n 1 24 ASP n 1 25 GLU n 1 26 ASN n 1 27 GLU n 1 28 HIS n 1 29 ALA n 1 30 HIS n 1 31 PHE n 1 32 GLN n 1 33 LYS n 1 34 ALA n 1 35 LYS n 1 36 GLU n 1 37 ARG n 1 38 LEU n 1 39 GLU n 1 40 ALA n 1 41 LYS n 1 42 HIS n 1 43 ARG n 1 44 GLU n 1 45 ARG n 1 46 MET n 1 47 SER n 1 48 GLN n 1 49 VAL n 1 50 MET n 1 51 ARG n 1 52 GLU n 1 53 TRP n 1 54 GLU n 1 55 GLU n 1 56 ALA n 1 57 GLU n 1 58 ARG n 1 59 GLN n 1 60 ALA n 1 61 LYS n 1 62 ASN n 1 63 LEU n 1 64 PRO n 1 65 LYS n 1 66 ALA n 1 67 ASP n 1 68 LYS n 1 69 LYS n 1 70 ALA n 1 71 VAL n 1 72 ILE n 1 73 GLN n 1 74 HIS n 1 75 PHE n 1 76 GLN n 1 77 GLU n 1 78 LYS n 1 79 VAL n 1 80 GLU n 1 81 SER n 1 82 LEU n 1 83 GLU n 1 84 GLN n 1 85 GLU n 1 86 ALA n 1 87 ALA n 1 88 ASN n 1 89 GLU n 1 90 ARG n 1 91 GLN n 1 92 GLN n 1 93 LEU n 1 94 VAL n 1 95 GLU n 1 96 THR n 1 97 HIS n 1 98 MET n 1 99 ALA n 1 100 ARG n 1 101 VAL n 1 102 GLU n 1 103 ALA n 1 104 MET n 1 105 LEU n 1 106 ASN n 1 107 ASP n 1 108 ARG n 1 109 ARG n 1 110 ARG n 1 111 LEU n 1 112 ALA n 1 113 LEU n 1 114 GLU n 1 115 ASN n 1 116 TYR n 1 117 ILE n 1 118 THR n 1 119 ALA n 1 120 LEU n 1 121 GLN n 1 122 ALA n 1 123 VAL n 1 124 PRO n 1 125 PRO n 1 126 ARG n 1 127 PRO n 1 128 ARG n 1 129 HIS n 1 130 VAL n 1 131 PHE n 1 132 ASN n 1 133 MET n 1 134 LEU n 1 135 LYS n 1 136 LYS n 1 137 TYR n 1 138 VAL n 1 139 ARG n 1 140 ALA n 1 141 GLU n 1 142 GLN n 1 143 LYS n 1 144 ASP n 1 145 ARG n 1 146 GLN n 1 147 HIS n 1 148 THR n 1 149 LEU n 1 150 LYS n 1 151 HIS n 1 152 PHE n 1 153 GLU n 1 154 HIS n 1 155 VAL n 1 156 ARG n 1 157 MET n 1 158 VAL n 1 159 ASP n 1 160 PRO n 1 161 LYS n 1 162 LYS n 1 163 ALA n 1 164 ALA n 1 165 GLN n 1 166 ILE n 1 167 ARG n 1 168 SER n 1 169 GLN n 1 170 VAL n 1 171 MET n 1 172 THR n 1 173 HIS n 1 174 LEU n 1 175 ARG n 1 176 VAL n 1 177 ILE n 1 178 TYR n 1 179 GLU n 1 180 ARG n 1 181 MET n 1 182 ASN n 1 183 GLN n 1 184 SER n 1 185 LEU n 1 186 SER n 1 187 LEU n 1 188 LEU n 1 189 TYR n 1 190 ASN n 1 191 VAL n 1 192 PRO n 1 193 ALA n 1 194 VAL n 1 195 ALA n 1 196 GLU n 1 197 GLU n 1 198 ILE n 1 199 GLN n 1 200 ASP n 1 201 GLU n 1 202 VAL n 1 203 ASP n 1 204 GLU n 1 205 LEU n 1 206 LEU n 1 207 GLN n 1 208 LYS n 1 209 GLU n 1 210 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'APP, hCG_1810805' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 342 ? ? ? A . n A 1 2 SER 2 343 ? ? ? A . n A 1 3 HIS 3 344 ? ? ? A . n A 1 4 MET 4 345 ? ? ? A . n A 1 5 PRO 5 346 ? ? ? A . n A 1 6 THR 6 347 ? ? ? A . n A 1 7 THR 7 348 ? ? ? A . n A 1 8 ALA 8 349 ? ? ? A . n A 1 9 ALA 9 350 ? ? ? A . n A 1 10 SER 10 351 ? ? ? A . n A 1 11 THR 11 352 352 THR THR A . n A 1 12 PRO 12 353 353 PRO PRO A . n A 1 13 ASP 13 354 354 ASP ASP A . n A 1 14 ALA 14 355 355 ALA ALA A . n A 1 15 VAL 15 356 356 VAL VAL A . n A 1 16 ASP 16 357 357 ASP ASP A . n A 1 17 LYS 17 358 358 LYS ALA A . n A 1 18 TYR 18 359 359 TYR TYR A . n A 1 19 LEU 19 360 360 LEU LEU A . n A 1 20 GLU 20 361 361 GLU GLU A . n A 1 21 THR 21 362 362 THR THR A . n A 1 22 PRO 22 363 363 PRO PRO A . n A 1 23 GLY 23 364 364 GLY GLY A . n A 1 24 ASP 24 365 365 ASP ALA A . n A 1 25 GLU 25 366 366 GLU GLU A . n A 1 26 ASN 26 367 367 ASN ALA A . n A 1 27 GLU 27 368 368 GLU GLU A . n A 1 28 HIS 28 369 369 HIS HIS A . n A 1 29 ALA 29 370 370 ALA ALA A . n A 1 30 HIS 30 371 371 HIS HIS A . n A 1 31 PHE 31 372 372 PHE PHE A . n A 1 32 GLN 32 373 373 GLN GLN A . n A 1 33 LYS 33 374 374 LYS LYS A . n A 1 34 ALA 34 375 375 ALA ALA A . n A 1 35 LYS 35 376 376 LYS LYS A . n A 1 36 GLU 36 377 377 GLU GLU A . n A 1 37 ARG 37 378 378 ARG ARG A . n A 1 38 LEU 38 379 379 LEU LEU A . n A 1 39 GLU 39 380 380 GLU GLU A . n A 1 40 ALA 40 381 381 ALA ALA A . n A 1 41 LYS 41 382 382 LYS LYS A . n A 1 42 HIS 42 383 383 HIS HIS A . n A 1 43 ARG 43 384 384 ARG ARG A . n A 1 44 GLU 44 385 385 GLU GLU A . n A 1 45 ARG 45 386 386 ARG ARG A . n A 1 46 MET 46 387 387 MET MET A . n A 1 47 SER 47 388 388 SER SER A . n A 1 48 GLN 48 389 389 GLN GLN A . n A 1 49 VAL 49 390 390 VAL ALA A . n A 1 50 MET 50 391 391 MET MET A . n A 1 51 ARG 51 392 392 ARG ARG A . n A 1 52 GLU 52 393 393 GLU GLU A . n A 1 53 TRP 53 394 394 TRP TRP A . n A 1 54 GLU 54 395 395 GLU GLU A . n A 1 55 GLU 55 396 396 GLU ALA A . n A 1 56 ALA 56 397 397 ALA ALA A . n A 1 57 GLU 57 398 398 GLU ALA A . n A 1 58 ARG 58 399 399 ARG ARG A . n A 1 59 GLN 59 400 400 GLN GLN A . n A 1 60 ALA 60 401 401 ALA ALA A . n A 1 61 LYS 61 402 402 LYS ALA A . n A 1 62 ASN 62 403 403 ASN ALA A . n A 1 63 LEU 63 404 404 LEU LEU A . n A 1 64 PRO 64 405 405 PRO PRO A . n A 1 65 LYS 65 406 406 LYS ALA A . n A 1 66 ALA 66 407 407 ALA ALA A . n A 1 67 ASP 67 408 408 ASP ALA A . n A 1 68 LYS 68 409 409 LYS LYS A . n A 1 69 LYS 69 410 410 LYS LYS A . n A 1 70 ALA 70 411 411 ALA ALA A . n A 1 71 VAL 71 412 412 VAL VAL A . n A 1 72 ILE 72 413 413 ILE ILE A . n A 1 73 GLN 73 414 414 GLN ALA A . n A 1 74 HIS 74 415 415 HIS HIS A . n A 1 75 PHE 75 416 416 PHE PHE A . n A 1 76 GLN 76 417 417 GLN GLN A . n A 1 77 GLU 77 418 418 GLU GLU A . n A 1 78 LYS 78 419 419 LYS LYS A . n A 1 79 VAL 79 420 420 VAL VAL A . n A 1 80 GLU 80 421 421 GLU GLU A . n A 1 81 SER 81 422 422 SER SER A . n A 1 82 LEU 82 423 423 LEU LEU A . n A 1 83 GLU 83 424 424 GLU GLU A . n A 1 84 GLN 84 425 425 GLN GLN A . n A 1 85 GLU 85 426 426 GLU GLU A . n A 1 86 ALA 86 427 427 ALA ALA A . n A 1 87 ALA 87 428 428 ALA ALA A . n A 1 88 ASN 88 429 429 ASN ASN A . n A 1 89 GLU 89 430 430 GLU GLU A . n A 1 90 ARG 90 431 431 ARG ARG A . n A 1 91 GLN 91 432 432 GLN GLN A . n A 1 92 GLN 92 433 433 GLN GLN A . n A 1 93 LEU 93 434 434 LEU LEU A . n A 1 94 VAL 94 435 435 VAL VAL A . n A 1 95 GLU 95 436 436 GLU GLU A . n A 1 96 THR 96 437 437 THR THR A . n A 1 97 HIS 97 438 438 HIS HIS A . n A 1 98 MET 98 439 439 MET MET A . n A 1 99 ALA 99 440 440 ALA ALA A . n A 1 100 ARG 100 441 441 ARG ARG A . n A 1 101 VAL 101 442 442 VAL VAL A . n A 1 102 GLU 102 443 443 GLU GLU A . n A 1 103 ALA 103 444 444 ALA ALA A . n A 1 104 MET 104 445 445 MET ALA A . n A 1 105 LEU 105 446 446 LEU LEU A . n A 1 106 ASN 106 447 447 ASN ASN A . n A 1 107 ASP 107 448 448 ASP ASP A . n A 1 108 ARG 108 449 449 ARG ARG A . n A 1 109 ARG 109 450 450 ARG ARG A . n A 1 110 ARG 110 451 451 ARG ARG A . n A 1 111 LEU 111 452 452 LEU ALA A . n A 1 112 ALA 112 453 453 ALA ALA A . n A 1 113 LEU 113 454 454 LEU LEU A . n A 1 114 GLU 114 455 455 GLU GLU A . n A 1 115 ASN 115 456 456 ASN ASN A . n A 1 116 TYR 116 457 457 TYR TYR A . n A 1 117 ILE 117 458 458 ILE ILE A . n A 1 118 THR 118 459 459 THR THR A . n A 1 119 ALA 119 460 460 ALA ALA A . n A 1 120 LEU 120 461 461 LEU LEU A . n A 1 121 GLN 121 462 462 GLN GLN A . n A 1 122 ALA 122 463 463 ALA ALA A . n A 1 123 VAL 123 464 464 VAL ALA A . n A 1 124 PRO 124 465 465 PRO PRO A . n A 1 125 PRO 125 466 466 PRO PRO A . n A 1 126 ARG 126 467 467 ARG ARG A . n A 1 127 PRO 127 468 468 PRO PRO A . n A 1 128 ARG 128 469 469 ARG ARG A . n A 1 129 HIS 129 470 470 HIS ALA A . n A 1 130 VAL 130 471 471 VAL VAL A . n A 1 131 PHE 131 472 472 PHE PHE A . n A 1 132 ASN 132 473 473 ASN ALA A . n A 1 133 MET 133 474 474 MET ALA A . n A 1 134 LEU 134 475 475 LEU LEU A . n A 1 135 LYS 135 476 476 LYS LYS A . n A 1 136 LYS 136 477 477 LYS LYS A . n A 1 137 TYR 137 478 478 TYR TYR A . n A 1 138 VAL 138 479 479 VAL VAL A . n A 1 139 ARG 139 480 480 ARG ARG A . n A 1 140 ALA 140 481 481 ALA ALA A . n A 1 141 GLU 141 482 482 GLU GLU A . n A 1 142 GLN 142 483 483 GLN GLN A . n A 1 143 LYS 143 484 484 LYS ALA A . n A 1 144 ASP 144 485 485 ASP ASP A . n A 1 145 ARG 145 486 486 ARG ARG A . n A 1 146 GLN 146 487 487 GLN ALA A . n A 1 147 HIS 147 488 488 HIS HIS A . n A 1 148 THR 148 489 489 THR THR A . n A 1 149 LEU 149 490 490 LEU LEU A . n A 1 150 LYS 150 491 491 LYS LYS A . n A 1 151 HIS 151 492 492 HIS HIS A . n A 1 152 PHE 152 493 493 PHE PHE A . n A 1 153 GLU 153 494 494 GLU GLU A . n A 1 154 HIS 154 495 495 HIS HIS A . n A 1 155 VAL 155 496 496 VAL VAL A . n A 1 156 ARG 156 497 497 ARG ALA A . n A 1 157 MET 157 498 498 MET ALA A . n A 1 158 VAL 158 499 499 VAL ALA A . n A 1 159 ASP 159 500 500 ASP ALA A . n A 1 160 PRO 160 501 501 PRO PRO A . n A 1 161 LYS 161 502 502 LYS ALA A . n A 1 162 LYS 162 503 503 LYS LYS A . n A 1 163 ALA 163 504 504 ALA ALA A . n A 1 164 ALA 164 505 505 ALA ALA A . n A 1 165 GLN 165 506 506 GLN GLN A . n A 1 166 ILE 166 507 507 ILE ILE A . n A 1 167 ARG 167 508 508 ARG ALA A . n A 1 168 SER 168 509 509 SER ALA A . n A 1 169 GLN 169 510 510 GLN GLN A . n A 1 170 VAL 170 511 511 VAL VAL A . n A 1 171 MET 171 512 512 MET MET A . n A 1 172 THR 172 513 513 THR THR A . n A 1 173 HIS 173 514 514 HIS HIS A . n A 1 174 LEU 174 515 515 LEU LEU A . n A 1 175 ARG 175 516 516 ARG ALA A . n A 1 176 VAL 176 517 517 VAL VAL A . n A 1 177 ILE 177 518 518 ILE ILE A . n A 1 178 TYR 178 519 519 TYR TYR A . n A 1 179 GLU 179 520 520 GLU ALA A . n A 1 180 ARG 180 521 521 ARG ARG A . n A 1 181 MET 181 522 522 MET MET A . n A 1 182 ASN 182 523 523 ASN ASN A . n A 1 183 GLN 183 524 524 GLN ALA A . n A 1 184 SER 184 525 525 SER SER A . n A 1 185 LEU 185 526 526 LEU LEU A . n A 1 186 SER 186 527 527 SER SER A . n A 1 187 LEU 187 528 528 LEU ALA A . n A 1 188 LEU 188 529 529 LEU LEU A . n A 1 189 TYR 189 530 530 TYR ALA A . n A 1 190 ASN 190 531 531 ASN ALA A . n A 1 191 VAL 191 532 532 VAL ALA A . n A 1 192 PRO 192 533 533 PRO PRO A . n A 1 193 ALA 193 534 534 ALA ALA A . n A 1 194 VAL 194 535 535 VAL VAL A . n A 1 195 ALA 195 536 536 ALA ALA A . n A 1 196 GLU 196 537 537 GLU ALA A . n A 1 197 GLU 197 538 538 GLU GLU A . n A 1 198 ILE 198 539 539 ILE ILE A . n A 1 199 GLN 199 540 540 GLN GLN A . n A 1 200 ASP 200 541 541 ASP ASP A . n A 1 201 GLU 201 542 542 GLU ALA A . n A 1 202 VAL 202 543 543 VAL VAL A . n A 1 203 ASP 203 544 544 ASP ASP A . n A 1 204 GLU 204 545 545 GLU ALA A . n A 1 205 LEU 205 546 546 LEU LEU A . n A 1 206 LEU 206 547 547 LEU ALA A . n A 1 207 GLN 207 548 ? ? ? A . n A 1 208 LYS 208 549 ? ? ? A . n A 1 209 GLU 209 550 ? ? ? A . n A 1 210 GLN 210 551 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 1 1 HOH HOH A . B 2 HOH 2 2 2 HOH HOH A . B 2 HOH 3 3 3 HOH HOH A . B 2 HOH 4 4 4 HOH HOH A . B 2 HOH 5 5 5 HOH HOH A . B 2 HOH 6 6 6 HOH HOH A . B 2 HOH 7 7 7 HOH HOH A . B 2 HOH 8 8 8 HOH HOH A . B 2 HOH 9 9 9 HOH HOH A . B 2 HOH 10 10 10 HOH HOH A . B 2 HOH 11 11 11 HOH HOH A . B 2 HOH 12 12 12 HOH HOH A . B 2 HOH 13 13 13 HOH HOH A . B 2 HOH 14 14 14 HOH HOH A . B 2 HOH 15 15 15 HOH HOH A . B 2 HOH 16 16 16 HOH HOH A . B 2 HOH 17 17 17 HOH HOH A . B 2 HOH 18 18 18 HOH HOH A . B 2 HOH 19 19 19 HOH HOH A . B 2 HOH 20 20 20 HOH HOH A . B 2 HOH 21 21 21 HOH HOH A . B 2 HOH 22 22 22 HOH HOH A . B 2 HOH 23 23 23 HOH HOH A . B 2 HOH 24 24 24 HOH HOH A . B 2 HOH 25 25 25 HOH HOH A . B 2 HOH 26 26 26 HOH HOH A . B 2 HOH 27 27 27 HOH HOH A . B 2 HOH 28 28 28 HOH HOH A . B 2 HOH 29 29 29 HOH HOH A . B 2 HOH 30 30 30 HOH HOH A . B 2 HOH 31 31 31 HOH HOH A . B 2 HOH 32 32 32 HOH HOH A . B 2 HOH 33 33 33 HOH HOH A . B 2 HOH 34 34 34 HOH HOH A . B 2 HOH 35 35 35 HOH HOH A . B 2 HOH 36 36 36 HOH HOH A . B 2 HOH 37 37 37 HOH HOH A . B 2 HOH 38 38 38 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A THR 352 ? OG1 ? A THR 11 OG1 2 1 Y 1 A THR 352 ? CG2 ? A THR 11 CG2 3 1 Y 1 A LYS 358 ? CG ? A LYS 17 CG 4 1 Y 1 A LYS 358 ? CD ? A LYS 17 CD 5 1 Y 1 A LYS 358 ? CE ? A LYS 17 CE 6 1 Y 1 A LYS 358 ? NZ ? A LYS 17 NZ 7 1 Y 1 A ASP 365 ? CG ? A ASP 24 CG 8 1 Y 1 A ASP 365 ? OD1 ? A ASP 24 OD1 9 1 Y 1 A ASP 365 ? OD2 ? A ASP 24 OD2 10 1 Y 1 A ASN 367 ? CG ? A ASN 26 CG 11 1 Y 1 A ASN 367 ? OD1 ? A ASN 26 OD1 12 1 Y 1 A ASN 367 ? ND2 ? A ASN 26 ND2 13 1 Y 1 A LYS 374 ? CD ? A LYS 33 CD 14 1 Y 1 A LYS 374 ? CE ? A LYS 33 CE 15 1 Y 1 A LYS 374 ? NZ ? A LYS 33 NZ 16 1 Y 1 A GLU 377 ? CD ? A GLU 36 CD 17 1 Y 1 A GLU 377 ? OE1 ? A GLU 36 OE1 18 1 Y 1 A GLU 377 ? OE2 ? A GLU 36 OE2 19 1 Y 1 A ARG 378 ? CD ? A ARG 37 CD 20 1 Y 1 A ARG 378 ? NE ? A ARG 37 NE 21 1 Y 1 A ARG 378 ? CZ ? A ARG 37 CZ 22 1 Y 1 A ARG 378 ? NH1 ? A ARG 37 NH1 23 1 Y 1 A ARG 378 ? NH2 ? A ARG 37 NH2 24 1 Y 1 A LYS 382 ? CD ? A LYS 41 CD 25 1 Y 1 A LYS 382 ? CE ? A LYS 41 CE 26 1 Y 1 A LYS 382 ? NZ ? A LYS 41 NZ 27 1 Y 1 A GLN 389 ? CD ? A GLN 48 CD 28 1 Y 1 A GLN 389 ? OE1 ? A GLN 48 OE1 29 1 Y 1 A GLN 389 ? NE2 ? A GLN 48 NE2 30 1 Y 1 A VAL 390 ? CG1 ? A VAL 49 CG1 31 1 Y 1 A VAL 390 ? CG2 ? A VAL 49 CG2 32 1 Y 1 A GLU 396 ? CG ? A GLU 55 CG 33 1 Y 1 A GLU 396 ? CD ? A GLU 55 CD 34 1 Y 1 A GLU 396 ? OE1 ? A GLU 55 OE1 35 1 Y 1 A GLU 396 ? OE2 ? A GLU 55 OE2 36 1 Y 1 A GLU 398 ? CG ? A GLU 57 CG 37 1 Y 1 A GLU 398 ? CD ? A GLU 57 CD 38 1 Y 1 A GLU 398 ? OE1 ? A GLU 57 OE1 39 1 Y 1 A GLU 398 ? OE2 ? A GLU 57 OE2 40 1 Y 1 A LYS 402 ? CG ? A LYS 61 CG 41 1 Y 1 A LYS 402 ? CD ? A LYS 61 CD 42 1 Y 1 A LYS 402 ? CE ? A LYS 61 CE 43 1 Y 1 A LYS 402 ? NZ ? A LYS 61 NZ 44 1 Y 1 A ASN 403 ? CG ? A ASN 62 CG 45 1 Y 1 A ASN 403 ? OD1 ? A ASN 62 OD1 46 1 Y 1 A ASN 403 ? ND2 ? A ASN 62 ND2 47 1 Y 1 A LYS 406 ? CG ? A LYS 65 CG 48 1 Y 1 A LYS 406 ? CD ? A LYS 65 CD 49 1 Y 1 A LYS 406 ? CE ? A LYS 65 CE 50 1 Y 1 A LYS 406 ? NZ ? A LYS 65 NZ 51 1 Y 1 A ASP 408 ? CG ? A ASP 67 CG 52 1 Y 1 A ASP 408 ? OD1 ? A ASP 67 OD1 53 1 Y 1 A ASP 408 ? OD2 ? A ASP 67 OD2 54 1 Y 1 A LYS 410 ? CD ? A LYS 69 CD 55 1 Y 1 A LYS 410 ? CE ? A LYS 69 CE 56 1 Y 1 A LYS 410 ? NZ ? A LYS 69 NZ 57 1 Y 1 A GLN 414 ? CG ? A GLN 73 CG 58 1 Y 1 A GLN 414 ? CD ? A GLN 73 CD 59 1 Y 1 A GLN 414 ? OE1 ? A GLN 73 OE1 60 1 Y 1 A GLN 414 ? NE2 ? A GLN 73 NE2 61 1 Y 1 A GLN 425 ? CD ? A GLN 84 CD 62 1 Y 1 A GLN 425 ? OE1 ? A GLN 84 OE1 63 1 Y 1 A GLN 425 ? NE2 ? A GLN 84 NE2 64 1 Y 1 A GLN 432 ? CD ? A GLN 91 CD 65 1 Y 1 A GLN 432 ? OE1 ? A GLN 91 OE1 66 1 Y 1 A GLN 432 ? NE2 ? A GLN 91 NE2 67 1 Y 1 A MET 445 ? CG ? A MET 104 CG 68 1 Y 1 A MET 445 ? SD ? A MET 104 SD 69 1 Y 1 A MET 445 ? CE ? A MET 104 CE 70 1 Y 1 A ARG 449 ? CD ? A ARG 108 CD 71 1 Y 1 A ARG 449 ? NE ? A ARG 108 NE 72 1 Y 1 A ARG 449 ? CZ ? A ARG 108 CZ 73 1 Y 1 A ARG 449 ? NH1 ? A ARG 108 NH1 74 1 Y 1 A ARG 449 ? NH2 ? A ARG 108 NH2 75 1 Y 1 A LEU 452 ? CG ? A LEU 111 CG 76 1 Y 1 A LEU 452 ? CD1 ? A LEU 111 CD1 77 1 Y 1 A LEU 452 ? CD2 ? A LEU 111 CD2 78 1 Y 1 A VAL 464 ? CG1 ? A VAL 123 CG1 79 1 Y 1 A VAL 464 ? CG2 ? A VAL 123 CG2 80 1 Y 1 A ARG 467 ? CD ? A ARG 126 CD 81 1 Y 1 A ARG 467 ? NE ? A ARG 126 NE 82 1 Y 1 A ARG 467 ? CZ ? A ARG 126 CZ 83 1 Y 1 A ARG 467 ? NH1 ? A ARG 126 NH1 84 1 Y 1 A ARG 467 ? NH2 ? A ARG 126 NH2 85 1 Y 1 A ARG 469 ? CD ? A ARG 128 CD 86 1 Y 1 A ARG 469 ? NE ? A ARG 128 NE 87 1 Y 1 A ARG 469 ? CZ ? A ARG 128 CZ 88 1 Y 1 A ARG 469 ? NH1 ? A ARG 128 NH1 89 1 Y 1 A ARG 469 ? NH2 ? A ARG 128 NH2 90 1 Y 1 A HIS 470 ? CG ? A HIS 129 CG 91 1 Y 1 A HIS 470 ? ND1 ? A HIS 129 ND1 92 1 Y 1 A HIS 470 ? CD2 ? A HIS 129 CD2 93 1 Y 1 A HIS 470 ? CE1 ? A HIS 129 CE1 94 1 Y 1 A HIS 470 ? NE2 ? A HIS 129 NE2 95 1 Y 1 A ASN 473 ? CG ? A ASN 132 CG 96 1 Y 1 A ASN 473 ? OD1 ? A ASN 132 OD1 97 1 Y 1 A ASN 473 ? ND2 ? A ASN 132 ND2 98 1 Y 1 A MET 474 ? CG ? A MET 133 CG 99 1 Y 1 A MET 474 ? SD ? A MET 133 SD 100 1 Y 1 A MET 474 ? CE ? A MET 133 CE 101 1 Y 1 A LYS 477 ? CD ? A LYS 136 CD 102 1 Y 1 A LYS 477 ? CE ? A LYS 136 CE 103 1 Y 1 A LYS 477 ? NZ ? A LYS 136 NZ 104 1 Y 1 A ARG 480 ? CD ? A ARG 139 CD 105 1 Y 1 A ARG 480 ? NE ? A ARG 139 NE 106 1 Y 1 A ARG 480 ? CZ ? A ARG 139 CZ 107 1 Y 1 A ARG 480 ? NH1 ? A ARG 139 NH1 108 1 Y 1 A ARG 480 ? NH2 ? A ARG 139 NH2 109 1 Y 1 A LYS 484 ? CG ? A LYS 143 CG 110 1 Y 1 A LYS 484 ? CD ? A LYS 143 CD 111 1 Y 1 A LYS 484 ? CE ? A LYS 143 CE 112 1 Y 1 A LYS 484 ? NZ ? A LYS 143 NZ 113 1 Y 1 A GLN 487 ? CG ? A GLN 146 CG 114 1 Y 1 A GLN 487 ? CD ? A GLN 146 CD 115 1 Y 1 A GLN 487 ? OE1 ? A GLN 146 OE1 116 1 Y 1 A GLN 487 ? NE2 ? A GLN 146 NE2 117 1 Y 1 A ARG 497 ? CG ? A ARG 156 CG 118 1 Y 1 A ARG 497 ? CD ? A ARG 156 CD 119 1 Y 1 A ARG 497 ? NE ? A ARG 156 NE 120 1 Y 1 A ARG 497 ? CZ ? A ARG 156 CZ 121 1 Y 1 A ARG 497 ? NH1 ? A ARG 156 NH1 122 1 Y 1 A ARG 497 ? NH2 ? A ARG 156 NH2 123 1 Y 1 A MET 498 ? CG ? A MET 157 CG 124 1 Y 1 A MET 498 ? SD ? A MET 157 SD 125 1 Y 1 A MET 498 ? CE ? A MET 157 CE 126 1 Y 1 A VAL 499 ? CG1 ? A VAL 158 CG1 127 1 Y 1 A VAL 499 ? CG2 ? A VAL 158 CG2 128 1 Y 1 A ASP 500 ? CG ? A ASP 159 CG 129 1 Y 1 A ASP 500 ? OD1 ? A ASP 159 OD1 130 1 Y 1 A ASP 500 ? OD2 ? A ASP 159 OD2 131 1 Y 1 A LYS 502 ? CG ? A LYS 161 CG 132 1 Y 1 A LYS 502 ? CD ? A LYS 161 CD 133 1 Y 1 A LYS 502 ? CE ? A LYS 161 CE 134 1 Y 1 A LYS 502 ? NZ ? A LYS 161 NZ 135 1 Y 1 A LYS 503 ? CD ? A LYS 162 CD 136 1 Y 1 A LYS 503 ? CE ? A LYS 162 CE 137 1 Y 1 A LYS 503 ? NZ ? A LYS 162 NZ 138 1 Y 1 A ARG 508 ? CG ? A ARG 167 CG 139 1 Y 1 A ARG 508 ? CD ? A ARG 167 CD 140 1 Y 1 A ARG 508 ? NE ? A ARG 167 NE 141 1 Y 1 A ARG 508 ? CZ ? A ARG 167 CZ 142 1 Y 1 A ARG 508 ? NH1 ? A ARG 167 NH1 143 1 Y 1 A ARG 508 ? NH2 ? A ARG 167 NH2 144 1 Y 1 A SER 509 ? OG ? A SER 168 OG 145 1 Y 1 A ARG 516 ? CG ? A ARG 175 CG 146 1 Y 1 A ARG 516 ? CD ? A ARG 175 CD 147 1 Y 1 A ARG 516 ? NE ? A ARG 175 NE 148 1 Y 1 A ARG 516 ? CZ ? A ARG 175 CZ 149 1 Y 1 A ARG 516 ? NH1 ? A ARG 175 NH1 150 1 Y 1 A ARG 516 ? NH2 ? A ARG 175 NH2 151 1 Y 1 A GLU 520 ? CG ? A GLU 179 CG 152 1 Y 1 A GLU 520 ? CD ? A GLU 179 CD 153 1 Y 1 A GLU 520 ? OE1 ? A GLU 179 OE1 154 1 Y 1 A GLU 520 ? OE2 ? A GLU 179 OE2 155 1 Y 1 A GLN 524 ? CG ? A GLN 183 CG 156 1 Y 1 A GLN 524 ? CD ? A GLN 183 CD 157 1 Y 1 A GLN 524 ? OE1 ? A GLN 183 OE1 158 1 Y 1 A GLN 524 ? NE2 ? A GLN 183 NE2 159 1 Y 1 A LEU 528 ? CG ? A LEU 187 CG 160 1 Y 1 A LEU 528 ? CD1 ? A LEU 187 CD1 161 1 Y 1 A LEU 528 ? CD2 ? A LEU 187 CD2 162 1 Y 1 A TYR 530 ? CG ? A TYR 189 CG 163 1 Y 1 A TYR 530 ? CD1 ? A TYR 189 CD1 164 1 Y 1 A TYR 530 ? CD2 ? A TYR 189 CD2 165 1 Y 1 A TYR 530 ? CE1 ? A TYR 189 CE1 166 1 Y 1 A TYR 530 ? CE2 ? A TYR 189 CE2 167 1 Y 1 A TYR 530 ? CZ ? A TYR 189 CZ 168 1 Y 1 A TYR 530 ? OH ? A TYR 189 OH 169 1 Y 1 A ASN 531 ? CG ? A ASN 190 CG 170 1 Y 1 A ASN 531 ? OD1 ? A ASN 190 OD1 171 1 Y 1 A ASN 531 ? ND2 ? A ASN 190 ND2 172 1 Y 1 A VAL 532 ? CG1 ? A VAL 191 CG1 173 1 Y 1 A VAL 532 ? CG2 ? A VAL 191 CG2 174 1 Y 1 A GLU 537 ? CG ? A GLU 196 CG 175 1 Y 1 A GLU 537 ? CD ? A GLU 196 CD 176 1 Y 1 A GLU 537 ? OE1 ? A GLU 196 OE1 177 1 Y 1 A GLU 537 ? OE2 ? A GLU 196 OE2 178 1 Y 1 A GLU 538 ? CD ? A GLU 197 CD 179 1 Y 1 A GLU 538 ? OE1 ? A GLU 197 OE1 180 1 Y 1 A GLU 538 ? OE2 ? A GLU 197 OE2 181 1 Y 1 A GLN 540 ? CD ? A GLN 199 CD 182 1 Y 1 A GLN 540 ? OE1 ? A GLN 199 OE1 183 1 Y 1 A GLN 540 ? NE2 ? A GLN 199 NE2 184 1 Y 1 A ASP 541 ? OD1 ? A ASP 200 OD1 185 1 Y 1 A ASP 541 ? OD2 ? A ASP 200 OD2 186 1 Y 1 A GLU 542 ? CG ? A GLU 201 CG 187 1 Y 1 A GLU 542 ? CD ? A GLU 201 CD 188 1 Y 1 A GLU 542 ? OE1 ? A GLU 201 OE1 189 1 Y 1 A GLU 542 ? OE2 ? A GLU 201 OE2 190 1 Y 1 A GLU 545 ? CG ? A GLU 204 CG 191 1 Y 1 A GLU 545 ? CD ? A GLU 204 CD 192 1 Y 1 A GLU 545 ? OE1 ? A GLU 204 OE1 193 1 Y 1 A GLU 545 ? OE2 ? A GLU 204 OE2 194 1 Y 1 A LEU 547 ? CG ? A LEU 206 CG 195 1 Y 1 A LEU 547 ? CD1 ? A LEU 206 CD1 196 1 Y 1 A LEU 547 ? CD2 ? A LEU 206 CD2 # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 2 SOLVE . ? program 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 3 DM . ? program 'Kevin Cowtan' kowtan@ysbl.york.ac.uk phasing http://www.ccp4.ac.uk/dist/html/dm.html Fortran_77 ? 4 REFMAC 5.5.0109 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 5 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 CBASS . ? ? ? ? 'data collection' ? ? ? 7 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? # _cell.length_a 83.589 _cell.length_b 83.589 _cell.length_c 147.341 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3NYL _cell.pdbx_unique_axis ? _cell.Z_PDB 16 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'I 4 2 2' _symmetry.entry_id 3NYL _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 97 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 3NYL _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.60 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 52.72 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details '2M NaCl, 0.1M NaOAc, pH 4.5, VAPOR DIFFUSION, temperature 298K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.009 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X25' _diffrn_source.pdbx_wavelength_list 1.009 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X25 # _reflns.entry_id 3NYL _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 2.8 _reflns.d_resolution_low 40 _reflns.number_all 6778 _reflns.number_obs 6419 _reflns.percent_possible_obs 94.7 _reflns.pdbx_Rmerge_I_obs 0.050 _reflns.pdbx_Rsym_value 0.050 _reflns.pdbx_netI_over_sigmaI 24.3 _reflns.B_iso_Wilson_estimate 77 _reflns.pdbx_redundancy 8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.8 _reflns_shell.d_res_low 2.9 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 64.8 _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3NYL _refine.ls_d_res_high 2.8000 _refine.ls_d_res_low 40 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs ? _refine.ls_number_reflns_obs 6419 _refine.ls_number_reflns_all 6778 _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ramdon _refine.details ? _refine.ls_R_factor_all 0.265 _refine.ls_R_factor_obs 0.265 _refine.ls_R_factor_R_work 0.2581 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.3220 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 666 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 57.7311 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.solvent_model_details ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 191.820 _refine.B_iso_min 6.110 _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_ls_sigma_I 0 _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1435 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 38 _refine_hist.number_atoms_total 1473 _refine_hist.d_res_high 2.8000 _refine_hist.d_res_low 40 # _struct.entry_id 3NYL _struct.title 'The X-ray structure of an antiparallel dimer of the human amyloid precursor protein E2 domain' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3NYL _struct_keywords.text ;Alzheimer's disease, helical hairpin, CELL ADHESION ; _struct_keywords.pdbx_keywords 'CELL ADHESION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code D3DSD2_HUMAN _struct_ref.pdbx_db_accession D3DSD2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQ EAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAA QIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQ ; _struct_ref.pdbx_align_begin 346 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3NYL _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 210 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession D3DSD2 _struct_ref_seq.db_align_beg 346 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 551 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 346 _struct_ref_seq.pdbx_auth_seq_align_end 551 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3NYL GLY A 1 ? UNP D3DSD2 ? ? 'expression tag' 342 1 1 3NYL SER A 2 ? UNP D3DSD2 ? ? 'expression tag' 343 2 1 3NYL HIS A 3 ? UNP D3DSD2 ? ? 'expression tag' 344 3 1 3NYL MET A 4 ? UNP D3DSD2 ? ? 'expression tag' 345 4 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3040 ? 1 MORE -13 ? 1 'SSA (A^2)' 20920 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_656 -x+1,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 83.5890000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 147.3410000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 13 ? THR A 21 ? ASP A 354 THR A 362 1 ? 9 HELX_P HELX_P2 2 GLU A 27 ? LYS A 61 ? GLU A 368 LYS A 402 1 ? 35 HELX_P HELX_P3 3 PRO A 64 ? ALA A 122 ? PRO A 405 ALA A 463 1 ? 59 HELX_P HELX_P4 4 ARG A 126 ? HIS A 154 ? ARG A 467 HIS A 495 1 ? 29 HELX_P HELX_P5 5 LYS A 161 ? SER A 186 ? LYS A 502 SER A 527 1 ? 26 HELX_P HELX_P6 6 SER A 186 ? VAL A 191 ? SER A 527 VAL A 532 1 ? 6 HELX_P HELX_P7 7 ALA A 193 ? LEU A 206 ? ALA A 534 LEU A 547 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 353 ? ? -61.67 88.87 2 1 THR A 362 ? ? -118.32 76.88 3 1 ASP A 365 ? ? -24.31 146.43 4 1 GLU A 368 ? ? 11.06 -79.38 5 1 GLU A 385 ? ? -62.99 -70.17 6 1 GLN A 400 ? ? -62.08 -72.65 7 1 ALA A 401 ? ? -57.83 -4.25 8 1 ASN A 403 ? ? -77.99 33.25 9 1 PRO A 466 ? ? -55.40 86.18 10 1 ARG A 467 ? ? -64.07 91.18 11 1 VAL A 496 ? ? -96.75 57.01 12 1 MET A 498 ? ? 152.70 -4.10 13 1 VAL A 499 ? ? -9.87 105.23 14 1 ASP A 500 ? ? -106.41 -93.51 15 1 PRO A 501 ? ? -71.25 -132.79 16 1 TYR A 519 ? ? -61.85 -73.31 17 1 VAL A 532 ? ? -115.02 70.01 18 1 PRO A 533 ? ? -66.38 81.08 19 1 ALA A 534 ? ? -170.59 -70.87 20 1 GLN A 540 ? ? -32.17 -88.30 21 1 ASP A 541 ? ? -37.39 -32.98 # _phasing.method MAD # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 342 ? A GLY 1 2 1 Y 1 A SER 343 ? A SER 2 3 1 Y 1 A HIS 344 ? A HIS 3 4 1 Y 1 A MET 345 ? A MET 4 5 1 Y 1 A PRO 346 ? A PRO 5 6 1 Y 1 A THR 347 ? A THR 6 7 1 Y 1 A THR 348 ? A THR 7 8 1 Y 1 A ALA 349 ? A ALA 8 9 1 Y 1 A ALA 350 ? A ALA 9 10 1 Y 1 A SER 351 ? A SER 10 11 1 Y 1 A GLN 548 ? A GLN 207 12 1 Y 1 A LYS 549 ? A LYS 208 13 1 Y 1 A GLU 550 ? A GLU 209 14 1 Y 1 A GLN 551 ? A GLN 210 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 PHE N N N N 236 PHE CA C N S 237 PHE C C N N 238 PHE O O N N 239 PHE CB C N N 240 PHE CG C Y N 241 PHE CD1 C Y N 242 PHE CD2 C Y N 243 PHE CE1 C Y N 244 PHE CE2 C Y N 245 PHE CZ C Y N 246 PHE OXT O N N 247 PHE H H N N 248 PHE H2 H N N 249 PHE HA H N N 250 PHE HB2 H N N 251 PHE HB3 H N N 252 PHE HD1 H N N 253 PHE HD2 H N N 254 PHE HE1 H N N 255 PHE HE2 H N N 256 PHE HZ H N N 257 PHE HXT H N N 258 PRO N N N N 259 PRO CA C N S 260 PRO C C N N 261 PRO O O N N 262 PRO CB C N N 263 PRO CG C N N 264 PRO CD C N N 265 PRO OXT O N N 266 PRO H H N N 267 PRO HA H N N 268 PRO HB2 H N N 269 PRO HB3 H N N 270 PRO HG2 H N N 271 PRO HG3 H N N 272 PRO HD2 H N N 273 PRO HD3 H N N 274 PRO HXT H N N 275 SER N N N N 276 SER CA C N S 277 SER C C N N 278 SER O O N N 279 SER CB C N N 280 SER OG O N N 281 SER OXT O N N 282 SER H H N N 283 SER H2 H N N 284 SER HA H N N 285 SER HB2 H N N 286 SER HB3 H N N 287 SER HG H N N 288 SER HXT H N N 289 THR N N N N 290 THR CA C N S 291 THR C C N N 292 THR O O N N 293 THR CB C N R 294 THR OG1 O N N 295 THR CG2 C N N 296 THR OXT O N N 297 THR H H N N 298 THR H2 H N N 299 THR HA H N N 300 THR HB H N N 301 THR HG1 H N N 302 THR HG21 H N N 303 THR HG22 H N N 304 THR HG23 H N N 305 THR HXT H N N 306 TRP N N N N 307 TRP CA C N S 308 TRP C C N N 309 TRP O O N N 310 TRP CB C N N 311 TRP CG C Y N 312 TRP CD1 C Y N 313 TRP CD2 C Y N 314 TRP NE1 N Y N 315 TRP CE2 C Y N 316 TRP CE3 C Y N 317 TRP CZ2 C Y N 318 TRP CZ3 C Y N 319 TRP CH2 C Y N 320 TRP OXT O N N 321 TRP H H N N 322 TRP H2 H N N 323 TRP HA H N N 324 TRP HB2 H N N 325 TRP HB3 H N N 326 TRP HD1 H N N 327 TRP HE1 H N N 328 TRP HE3 H N N 329 TRP HZ2 H N N 330 TRP HZ3 H N N 331 TRP HH2 H N N 332 TRP HXT H N N 333 TYR N N N N 334 TYR CA C N S 335 TYR C C N N 336 TYR O O N N 337 TYR CB C N N 338 TYR CG C Y N 339 TYR CD1 C Y N 340 TYR CD2 C Y N 341 TYR CE1 C Y N 342 TYR CE2 C Y N 343 TYR CZ C Y N 344 TYR OH O N N 345 TYR OXT O N N 346 TYR H H N N 347 TYR H2 H N N 348 TYR HA H N N 349 TYR HB2 H N N 350 TYR HB3 H N N 351 TYR HD1 H N N 352 TYR HD2 H N N 353 TYR HE1 H N N 354 TYR HE2 H N N 355 TYR HH H N N 356 TYR HXT H N N 357 VAL N N N N 358 VAL CA C N S 359 VAL C C N N 360 VAL O O N N 361 VAL CB C N N 362 VAL CG1 C N N 363 VAL CG2 C N N 364 VAL OXT O N N 365 VAL H H N N 366 VAL H2 H N N 367 VAL HA H N N 368 VAL HB H N N 369 VAL HG11 H N N 370 VAL HG12 H N N 371 VAL HG13 H N N 372 VAL HG21 H N N 373 VAL HG22 H N N 374 VAL HG23 H N N 375 VAL HXT H N N 376 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 TRP N CA sing N N 293 TRP N H sing N N 294 TRP N H2 sing N N 295 TRP CA C sing N N 296 TRP CA CB sing N N 297 TRP CA HA sing N N 298 TRP C O doub N N 299 TRP C OXT sing N N 300 TRP CB CG sing N N 301 TRP CB HB2 sing N N 302 TRP CB HB3 sing N N 303 TRP CG CD1 doub Y N 304 TRP CG CD2 sing Y N 305 TRP CD1 NE1 sing Y N 306 TRP CD1 HD1 sing N N 307 TRP CD2 CE2 doub Y N 308 TRP CD2 CE3 sing Y N 309 TRP NE1 CE2 sing Y N 310 TRP NE1 HE1 sing N N 311 TRP CE2 CZ2 sing Y N 312 TRP CE3 CZ3 doub Y N 313 TRP CE3 HE3 sing N N 314 TRP CZ2 CH2 doub Y N 315 TRP CZ2 HZ2 sing N N 316 TRP CZ3 CH2 sing Y N 317 TRP CZ3 HZ3 sing N N 318 TRP CH2 HH2 sing N N 319 TRP OXT HXT sing N N 320 TYR N CA sing N N 321 TYR N H sing N N 322 TYR N H2 sing N N 323 TYR CA C sing N N 324 TYR CA CB sing N N 325 TYR CA HA sing N N 326 TYR C O doub N N 327 TYR C OXT sing N N 328 TYR CB CG sing N N 329 TYR CB HB2 sing N N 330 TYR CB HB3 sing N N 331 TYR CG CD1 doub Y N 332 TYR CG CD2 sing Y N 333 TYR CD1 CE1 sing Y N 334 TYR CD1 HD1 sing N N 335 TYR CD2 CE2 doub Y N 336 TYR CD2 HD2 sing N N 337 TYR CE1 CZ doub Y N 338 TYR CE1 HE1 sing N N 339 TYR CE2 CZ sing Y N 340 TYR CE2 HE2 sing N N 341 TYR CZ OH sing N N 342 TYR OH HH sing N N 343 TYR OXT HXT sing N N 344 VAL N CA sing N N 345 VAL N H sing N N 346 VAL N H2 sing N N 347 VAL CA C sing N N 348 VAL CA CB sing N N 349 VAL CA HA sing N N 350 VAL C O doub N N 351 VAL C OXT sing N N 352 VAL CB CG1 sing N N 353 VAL CB CG2 sing N N 354 VAL CB HB sing N N 355 VAL CG1 HG11 sing N N 356 VAL CG1 HG12 sing N N 357 VAL CG1 HG13 sing N N 358 VAL CG2 HG21 sing N N 359 VAL CG2 HG22 sing N N 360 VAL CG2 HG23 sing N N 361 VAL OXT HXT sing N N 362 # _atom_sites.entry_id 3NYL _atom_sites.fract_transf_matrix[1][1] 0.011963 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011963 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006787 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_