data_3NZ6 # _entry.id 3NZ6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3NZ6 pdb_00003nz6 10.2210/pdb3nz6/pdb RCSB RCSB060462 ? ? WWPDB D_1000060462 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3NXO . unspecified PDB 3NXR . unspecified PDB 3NXT . unspecified PDB 3NXV . unspecified PDB 3NXX . unspecified PDB 3NXY . unspecified PDB 3NZ6 . unspecified PDB 3NZ9 . unspecified PDB 3NZA . unspecified PDB 3NZB . unspecified PDB 3NZC . unspecified PDB 3NZD . unspecified PDB 2fzh . unspecified PDB 2fzi . unspecified PDB 2fzj . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3NZ6 _pdbx_database_status.recvd_initial_deposition_date 2010-07-16 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Cody, V.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Structural analysis of Pneumocystis carinii and human DHFR complexes with NADPH and a series of five potent 6-[5'-([omega]-carboxyalkoxy)benzyl]pyrido[2,3-d]pyrimidine derivatives ; _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 67 _citation.page_first 1 _citation.page_last 7 _citation.year 2011 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21206056 _citation.pdbx_database_id_DOI 10.1107/S0907444910041004 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cody, V.' 1 ? primary 'Pace, J.' 2 ? # _cell.entry_id 3NZ6 _cell.length_a 37.113 _cell.length_b 42.768 _cell.length_c 60.756 _cell.angle_alpha 90.00 _cell.angle_beta 94.39 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3NZ6 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Dihydrofolate reductase' 23918.537 1 1.5.1.3 ? ? ? 2 non-polymer syn '6-{3-[(2,4-diamino-5-methylpyrido[2,3-d]pyrimidin-6-yl)methyl]-4-methoxyphenoxy}hexanoic acid' 425.481 1 ? ? ? ? 3 non-polymer syn 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 745.421 1 ? ? ? ? 4 water nat water 18.015 166 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MNQQKSLTLIVALTTSYGIGRSNSLPWKLKKEISYFKRVTSFVPTFDSFESMNVVLMGRKTWESIPLQFRPLKGRINVVI TRNESLDLGNGIHSAKSLDHALELLYRTYGSESSVQINRIFVIGGAQLYKAAMDHPKLDRIMATIIYKDIHCDVFFPLKF RDKEWSSVWKKEKHSDLESWVGTKVPHGKINEDGFDYEFEMWTRDL ; _entity_poly.pdbx_seq_one_letter_code_can ;MNQQKSLTLIVALTTSYGIGRSNSLPWKLKKEISYFKRVTSFVPTFDSFESMNVVLMGRKTWESIPLQFRPLKGRINVVI TRNESLDLGNGIHSAKSLDHALELLYRTYGSESSVQINRIFVIGGAQLYKAAMDHPKLDRIMATIIYKDIHCDVFFPLKF RDKEWSSVWKKEKHSDLESWVGTKVPHGKINEDGFDYEFEMWTRDL ; _entity_poly.pdbx_strand_id X _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASN n 1 3 GLN n 1 4 GLN n 1 5 LYS n 1 6 SER n 1 7 LEU n 1 8 THR n 1 9 LEU n 1 10 ILE n 1 11 VAL n 1 12 ALA n 1 13 LEU n 1 14 THR n 1 15 THR n 1 16 SER n 1 17 TYR n 1 18 GLY n 1 19 ILE n 1 20 GLY n 1 21 ARG n 1 22 SER n 1 23 ASN n 1 24 SER n 1 25 LEU n 1 26 PRO n 1 27 TRP n 1 28 LYS n 1 29 LEU n 1 30 LYS n 1 31 LYS n 1 32 GLU n 1 33 ILE n 1 34 SER n 1 35 TYR n 1 36 PHE n 1 37 LYS n 1 38 ARG n 1 39 VAL n 1 40 THR n 1 41 SER n 1 42 PHE n 1 43 VAL n 1 44 PRO n 1 45 THR n 1 46 PHE n 1 47 ASP n 1 48 SER n 1 49 PHE n 1 50 GLU n 1 51 SER n 1 52 MET n 1 53 ASN n 1 54 VAL n 1 55 VAL n 1 56 LEU n 1 57 MET n 1 58 GLY n 1 59 ARG n 1 60 LYS n 1 61 THR n 1 62 TRP n 1 63 GLU n 1 64 SER n 1 65 ILE n 1 66 PRO n 1 67 LEU n 1 68 GLN n 1 69 PHE n 1 70 ARG n 1 71 PRO n 1 72 LEU n 1 73 LYS n 1 74 GLY n 1 75 ARG n 1 76 ILE n 1 77 ASN n 1 78 VAL n 1 79 VAL n 1 80 ILE n 1 81 THR n 1 82 ARG n 1 83 ASN n 1 84 GLU n 1 85 SER n 1 86 LEU n 1 87 ASP n 1 88 LEU n 1 89 GLY n 1 90 ASN n 1 91 GLY n 1 92 ILE n 1 93 HIS n 1 94 SER n 1 95 ALA n 1 96 LYS n 1 97 SER n 1 98 LEU n 1 99 ASP n 1 100 HIS n 1 101 ALA n 1 102 LEU n 1 103 GLU n 1 104 LEU n 1 105 LEU n 1 106 TYR n 1 107 ARG n 1 108 THR n 1 109 TYR n 1 110 GLY n 1 111 SER n 1 112 GLU n 1 113 SER n 1 114 SER n 1 115 VAL n 1 116 GLN n 1 117 ILE n 1 118 ASN n 1 119 ARG n 1 120 ILE n 1 121 PHE n 1 122 VAL n 1 123 ILE n 1 124 GLY n 1 125 GLY n 1 126 ALA n 1 127 GLN n 1 128 LEU n 1 129 TYR n 1 130 LYS n 1 131 ALA n 1 132 ALA n 1 133 MET n 1 134 ASP n 1 135 HIS n 1 136 PRO n 1 137 LYS n 1 138 LEU n 1 139 ASP n 1 140 ARG n 1 141 ILE n 1 142 MET n 1 143 ALA n 1 144 THR n 1 145 ILE n 1 146 ILE n 1 147 TYR n 1 148 LYS n 1 149 ASP n 1 150 ILE n 1 151 HIS n 1 152 CYS n 1 153 ASP n 1 154 VAL n 1 155 PHE n 1 156 PHE n 1 157 PRO n 1 158 LEU n 1 159 LYS n 1 160 PHE n 1 161 ARG n 1 162 ASP n 1 163 LYS n 1 164 GLU n 1 165 TRP n 1 166 SER n 1 167 SER n 1 168 VAL n 1 169 TRP n 1 170 LYS n 1 171 LYS n 1 172 GLU n 1 173 LYS n 1 174 HIS n 1 175 SER n 1 176 ASP n 1 177 LEU n 1 178 GLU n 1 179 SER n 1 180 TRP n 1 181 VAL n 1 182 GLY n 1 183 THR n 1 184 LYS n 1 185 VAL n 1 186 PRO n 1 187 HIS n 1 188 GLY n 1 189 LYS n 1 190 ILE n 1 191 ASN n 1 192 GLU n 1 193 ASP n 1 194 GLY n 1 195 PHE n 1 196 ASP n 1 197 TYR n 1 198 GLU n 1 199 PHE n 1 200 GLU n 1 201 MET n 1 202 TRP n 1 203 THR n 1 204 ARG n 1 205 ASP n 1 206 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pneumocystis carinii' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4754 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain D3-157 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DYR_PNECA _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MNQQKSLTLIVALTTSYGIGRSNSLPWKLKKEISYFKRVTSFVPTFDSFESMNVVLMGRKTWESIPLQFRPLKGRINVVI TRNESLDLGNGIHSAKSLDHALELLYRTYGSESSVQINRIFVIGGAQLYKAAMDHPKLDRIMATIIYKDIHCDVFFPLKF RDKEWSSVWKKEKHSDLESWVGTKVPHGKINEDGFDYEFEMWTRDL ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_accession P16184 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3NZ6 _struct_ref_seq.pdbx_strand_id X _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 206 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P16184 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 206 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 206 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 D2J non-polymer . '6-{3-[(2,4-diamino-5-methylpyrido[2,3-d]pyrimidin-6-yl)methyl]-4-methoxyphenoxy}hexanoic acid' ? 'C22 H27 N5 O4' 425.481 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NDP non-polymer . 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' ? 'C21 H30 N7 O17 P3' 745.421 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3NZ6 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.01 _exptl_crystal.density_percent_sol 38.81 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 273 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details '33-36% PEG 2K, 46-52 mM MES pH 6 100 mM KCL, VAPOR DIFFUSION, HANGING DROP, temperature 273K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 200 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.pdbx_collection_date 2006-06-06 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator graphite _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.975 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.975 # _reflns.entry_id 3NZ6 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 32.7 _reflns.d_resolution_high 2.0 _reflns.number_obs 17172 _reflns.number_all ? _reflns.percent_possible_obs 96.3 _reflns.pdbx_Rmerge_I_obs 0.061 _reflns.pdbx_Rsym_value 0.052 _reflns.pdbx_netI_over_sigmaI 14.4 _reflns.B_iso_Wilson_estimate 30.0 _reflns.pdbx_redundancy 3.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.0 _reflns_shell.d_res_low 1.86 _reflns_shell.percent_possible_all 98.8 _reflns_shell.Rmerge_I_obs .58 _reflns_shell.pdbx_Rsym_value .58 _reflns_shell.meanI_over_sigI_obs .49 _reflns_shell.pdbx_redundancy 1.2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1738 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3NZ6 _refine.ls_number_reflns_obs 11724 _refine.ls_number_reflns_all 11724 _refine.pdbx_ls_sigma_I 2.0 _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 32.70 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 94.76 _refine.ls_R_factor_obs 0.21177 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20789 _refine.ls_R_factor_R_free 0.28661 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 619 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc .945 _refine.correlation_coeff_Fo_to_Fc_free .902 _refine.B_iso_mean 31.358 _refine.aniso_B[1][1] .01 _refine.aniso_B[2][2] -.03 _refine.aniso_B[3][3] .02 _refine.aniso_B[1][2] .00 _refine.aniso_B[1][3] .00 _refine.aniso_B[2][3] .00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii .80 _refine.pdbx_solvent_shrinkage_radii .80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB entry 3cd2' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model isotropic _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free .238 _refine.overall_SU_ML .187 _refine.overall_SU_B 7.156 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3NZ6 _refine_analyze.Luzzati_coordinate_error_obs 0.29 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1686 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 79 _refine_hist.number_atoms_solvent 166 _refine_hist.number_atoms_total 1931 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 32.70 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d .020 .022 ? 1769 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.118 2.001 ? 2396 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 8.009 5.000 ? 198 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.794 23.158 ? 76 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 20.276 15.000 ? 311 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.142 15.000 ? 11 'X-RAY DIFFRACTION' ? r_chiral_restr .144 .200 ? 256 'X-RAY DIFFRACTION' ? r_gen_planes_refined .009 .021 ? 1298 'X-RAY DIFFRACTION' ? r_mcbond_it 1.113 1.500 ? 995 'X-RAY DIFFRACTION' ? r_mcangle_it 1.968 2.000 ? 1616 'X-RAY DIFFRACTION' ? r_scbond_it 2.737 3.000 ? 774 'X-RAY DIFFRACTION' ? r_scangle_it 4.327 4.500 ? 780 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.000 _refine_ls_shell.d_res_low 2.052 _refine_ls_shell.number_reflns_R_work 896 _refine_ls_shell.R_factor_R_work .244 _refine_ls_shell.percent_reflns_obs 99.37 _refine_ls_shell.R_factor_R_free .339 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 52 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3NZ6 _struct.title ;Structural Analysis of Pneumocystis carinii and Human DHFR Complexes with NADPH and a Series of Five Potent 5-(omega-Carboxy(alkyloxy)Pyrido[2,3-d]pyrimidine Derivatives ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3NZ6 _struct_keywords.pdbx_keywords 'OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR' _struct_keywords.text 'pneumocystis carinii DHFR inhibitor complexes, OXIDOREDUCTASE, OXIDOREDUCTASE-OXIDOREDUCTASE INHIBITOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 29 ? PHE A 42 ? LEU X 29 PHE X 42 1 ? 14 HELX_P HELX_P2 2 ARG A 59 ? SER A 64 ? ARG X 59 SER X 64 1 ? 6 HELX_P HELX_P3 3 PRO A 66 ? ARG A 70 ? PRO X 66 ARG X 70 5 ? 5 HELX_P HELX_P4 4 SER A 97 ? TYR A 109 ? SER X 97 TYR X 109 1 ? 13 HELX_P HELX_P5 5 GLY A 125 ? HIS A 135 ? GLY X 125 HIS X 135 1 ? 11 HELX_P HELX_P6 6 ASP A 162 ? SER A 166 ? ASP X 162 SER X 166 5 ? 5 HELX_P HELX_P7 7 LYS A 173 ? VAL A 181 ? LYS X 173 VAL X 181 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ARG 70 A . ? ARG 70 X PRO 71 A ? PRO 71 X 1 -6.11 2 SER 85 A . ? SER 85 X LEU 86 A ? LEU 86 X 1 5.64 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 8 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 HIS A 93 ? ALA A 95 ? HIS X 93 ALA X 95 A 2 ILE A 76 ? ILE A 80 ? ILE X 76 ILE X 80 A 3 SER A 51 ? GLY A 58 ? SER X 51 GLY X 58 A 4 GLN A 116 ? GLY A 124 ? GLN X 116 GLY X 124 A 5 LEU A 7 ? THR A 14 ? LEU X 7 THR X 14 A 6 LEU A 138 ? ILE A 146 ? LEU X 138 ILE X 146 A 7 PHE A 195 ? THR A 203 ? PHE X 195 THR X 203 A 8 LYS A 170 ? LYS A 171 ? LYS X 170 LYS X 171 B 1 HIS A 93 ? ALA A 95 ? HIS X 93 ALA X 95 B 2 ILE A 76 ? ILE A 80 ? ILE X 76 ILE X 80 B 3 SER A 51 ? GLY A 58 ? SER X 51 GLY X 58 B 4 GLN A 116 ? GLY A 124 ? GLN X 116 GLY X 124 B 5 LEU A 7 ? THR A 14 ? LEU X 7 THR X 14 B 6 LEU A 138 ? ILE A 146 ? LEU X 138 ILE X 146 B 7 PHE A 195 ? THR A 203 ? PHE X 195 THR X 203 B 8 ILE A 190 ? GLU A 192 ? ILE X 190 GLU X 192 C 1 GLY A 18 ? GLY A 20 ? GLY X 18 GLY X 20 C 2 VAL A 154 ? PHE A 155 ? VAL X 154 PHE X 155 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O HIS A 93 ? O HIS X 93 N VAL A 79 ? N VAL X 79 A 2 3 O ILE A 80 ? O ILE X 80 N MET A 57 ? N MET X 57 A 3 4 N MET A 52 ? N MET X 52 O GLN A 116 ? O GLN X 116 A 4 5 O VAL A 122 ? O VAL X 122 N ILE A 10 ? N ILE X 10 A 5 6 N LEU A 9 ? N LEU X 9 O ARG A 140 ? O ARG X 140 A 6 7 N ALA A 143 ? N ALA X 143 O GLU A 200 ? O GLU X 200 A 7 8 O THR A 203 ? O THR X 203 N LYS A 170 ? N LYS X 170 B 1 2 O HIS A 93 ? O HIS X 93 N VAL A 79 ? N VAL X 79 B 2 3 O ILE A 80 ? O ILE X 80 N MET A 57 ? N MET X 57 B 3 4 N MET A 52 ? N MET X 52 O GLN A 116 ? O GLN X 116 B 4 5 O VAL A 122 ? O VAL X 122 N ILE A 10 ? N ILE X 10 B 5 6 N LEU A 9 ? N LEU X 9 O ARG A 140 ? O ARG X 140 B 6 7 N ALA A 143 ? N ALA X 143 O GLU A 200 ? O GLU X 200 B 7 8 O TYR A 197 ? O TYR X 197 N ILE A 190 ? N ILE X 190 C 1 2 N ILE A 19 ? N ILE X 19 O VAL A 154 ? O VAL X 154 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software X D2J 207 ? 15 'BINDING SITE FOR RESIDUE D2J X 207' AC2 Software X NDP 208 ? 30 'BINDING SITE FOR RESIDUE NDP X 208' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 15 ILE A 10 ? ILE X 10 . ? 1_555 ? 2 AC1 15 VAL A 11 ? VAL X 11 . ? 1_555 ? 3 AC1 15 ALA A 12 ? ALA X 12 . ? 1_555 ? 4 AC1 15 LEU A 25 ? LEU X 25 . ? 1_555 ? 5 AC1 15 GLU A 32 ? GLU X 32 . ? 1_555 ? 6 AC1 15 ILE A 33 ? ILE X 33 . ? 1_555 ? 7 AC1 15 PHE A 36 ? PHE X 36 . ? 1_555 ? 8 AC1 15 LYS A 37 ? LYS X 37 . ? 1_555 ? 9 AC1 15 SER A 64 ? SER X 64 . ? 1_555 ? 10 AC1 15 PRO A 66 ? PRO X 66 . ? 1_555 ? 11 AC1 15 PHE A 69 ? PHE X 69 . ? 1_555 ? 12 AC1 15 ARG A 75 ? ARG X 75 . ? 1_555 ? 13 AC1 15 ILE A 123 ? ILE X 123 . ? 1_555 ? 14 AC1 15 TYR A 129 ? TYR X 129 . ? 1_555 ? 15 AC1 15 NDP C . ? NDP X 208 . ? 1_555 ? 16 AC2 30 VAL A 11 ? VAL X 11 . ? 1_555 ? 17 AC2 30 ALA A 12 ? ALA X 12 . ? 1_555 ? 18 AC2 30 ILE A 19 ? ILE X 19 . ? 1_555 ? 19 AC2 30 GLY A 20 ? GLY X 20 . ? 1_555 ? 20 AC2 30 ASN A 23 ? ASN X 23 . ? 1_555 ? 21 AC2 30 SER A 24 ? SER X 24 . ? 1_555 ? 22 AC2 30 LEU A 25 ? LEU X 25 . ? 1_555 ? 23 AC2 30 TRP A 27 ? TRP X 27 . ? 1_555 ? 24 AC2 30 GLY A 58 ? GLY X 58 . ? 1_555 ? 25 AC2 30 ARG A 59 ? ARG X 59 . ? 1_555 ? 26 AC2 30 LYS A 60 ? LYS X 60 . ? 1_555 ? 27 AC2 30 THR A 61 ? THR X 61 . ? 1_555 ? 28 AC2 30 SER A 64 ? SER X 64 . ? 1_555 ? 29 AC2 30 ILE A 80 ? ILE X 80 . ? 1_555 ? 30 AC2 30 THR A 81 ? THR X 81 . ? 1_555 ? 31 AC2 30 ARG A 82 ? ARG X 82 . ? 1_555 ? 32 AC2 30 LYS A 96 ? LYS X 96 . ? 1_555 ? 33 AC2 30 ILE A 123 ? ILE X 123 . ? 1_555 ? 34 AC2 30 GLY A 125 ? GLY X 125 . ? 1_555 ? 35 AC2 30 ALA A 126 ? ALA X 126 . ? 1_555 ? 36 AC2 30 GLN A 127 ? GLN X 127 . ? 1_555 ? 37 AC2 30 LEU A 128 ? LEU X 128 . ? 1_555 ? 38 AC2 30 TYR A 129 ? TYR X 129 . ? 1_555 ? 39 AC2 30 ALA A 131 ? ALA X 131 . ? 1_555 ? 40 AC2 30 D2J B . ? D2J X 207 . ? 1_555 ? 41 AC2 30 HOH D . ? HOH X 213 . ? 1_555 ? 42 AC2 30 HOH D . ? HOH X 231 . ? 1_555 ? 43 AC2 30 HOH D . ? HOH X 262 . ? 1_555 ? 44 AC2 30 HOH D . ? HOH X 340 . ? 1_555 ? 45 AC2 30 HOH D . ? HOH X 353 . ? 1_555 ? # _database_PDB_matrix.entry_id 3NZ6 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3NZ6 _atom_sites.fract_transf_matrix[1][1] .026945 _atom_sites.fract_transf_matrix[1][2] .000000 _atom_sites.fract_transf_matrix[1][3] .002069 _atom_sites.fract_transf_matrix[2][1] .000000 _atom_sites.fract_transf_matrix[2][2] .023382 _atom_sites.fract_transf_matrix[2][3] .000000 _atom_sites.fract_transf_matrix[3][1] .000000 _atom_sites.fract_transf_matrix[3][2] .000000 _atom_sites.fract_transf_matrix[3][3] .016508 _atom_sites.fract_transf_vector[1] .00000 _atom_sites.fract_transf_vector[2] .00000 _atom_sites.fract_transf_vector[3] .00000 # loop_ _atom_type.symbol C N O P S # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 ;C-N bond distances between residues ASN 83 and GLU 84 and between residues GLY 89 and ASN 90 are outside of the accepted range for the peptide bond ; 2 ;The stereochemistry at C2'sugar (C13) atom for ligand NDP is incorrect. ; # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET X . n A 1 2 ASN 2 2 2 ASN ASN X . n A 1 3 GLN 3 3 3 GLN GLN X . n A 1 4 GLN 4 4 4 GLN GLN X . n A 1 5 LYS 5 5 5 LYS LYS X . n A 1 6 SER 6 6 6 SER SER X . n A 1 7 LEU 7 7 7 LEU LEU X . n A 1 8 THR 8 8 8 THR THR X . n A 1 9 LEU 9 9 9 LEU LEU X . n A 1 10 ILE 10 10 10 ILE ILE X . n A 1 11 VAL 11 11 11 VAL VAL X . n A 1 12 ALA 12 12 12 ALA ALA X . n A 1 13 LEU 13 13 13 LEU LEU X . n A 1 14 THR 14 14 14 THR THR X . n A 1 15 THR 15 15 15 THR THR X . n A 1 16 SER 16 16 16 SER SER X . n A 1 17 TYR 17 17 17 TYR TYR X . n A 1 18 GLY 18 18 18 GLY GLY X . n A 1 19 ILE 19 19 19 ILE ILE X . n A 1 20 GLY 20 20 20 GLY GLY X . n A 1 21 ARG 21 21 21 ARG ARG X . n A 1 22 SER 22 22 22 SER SER X . n A 1 23 ASN 23 23 23 ASN ASN X . n A 1 24 SER 24 24 24 SER SER X . n A 1 25 LEU 25 25 25 LEU LEU X . n A 1 26 PRO 26 26 26 PRO PRO X . n A 1 27 TRP 27 27 27 TRP TRP X . n A 1 28 LYS 28 28 28 LYS LYS X . n A 1 29 LEU 29 29 29 LEU LEU X . n A 1 30 LYS 30 30 30 LYS LYS X . n A 1 31 LYS 31 31 31 LYS LYS X . n A 1 32 GLU 32 32 32 GLU GLU X . n A 1 33 ILE 33 33 33 ILE ILE X . n A 1 34 SER 34 34 34 SER SER X . n A 1 35 TYR 35 35 35 TYR TYR X . n A 1 36 PHE 36 36 36 PHE PHE X . n A 1 37 LYS 37 37 37 LYS LYS X . n A 1 38 ARG 38 38 38 ARG ARG X . n A 1 39 VAL 39 39 39 VAL VAL X . n A 1 40 THR 40 40 40 THR THR X . n A 1 41 SER 41 41 41 SER SER X . n A 1 42 PHE 42 42 42 PHE PHE X . n A 1 43 VAL 43 43 43 VAL VAL X . n A 1 44 PRO 44 44 44 PRO PRO X . n A 1 45 THR 45 45 45 THR THR X . n A 1 46 PHE 46 46 46 PHE PHE X . n A 1 47 ASP 47 47 47 ASP ASP X . n A 1 48 SER 48 48 48 SER SER X . n A 1 49 PHE 49 49 49 PHE PHE X . n A 1 50 GLU 50 50 50 GLU GLU X . n A 1 51 SER 51 51 51 SER SER X . n A 1 52 MET 52 52 52 MET MET X . n A 1 53 ASN 53 53 53 ASN ASN X . n A 1 54 VAL 54 54 54 VAL VAL X . n A 1 55 VAL 55 55 55 VAL VAL X . n A 1 56 LEU 56 56 56 LEU LEU X . n A 1 57 MET 57 57 57 MET MET X . n A 1 58 GLY 58 58 58 GLY GLY X . n A 1 59 ARG 59 59 59 ARG ARG X . n A 1 60 LYS 60 60 60 LYS LYS X . n A 1 61 THR 61 61 61 THR THR X . n A 1 62 TRP 62 62 62 TRP TRP X . n A 1 63 GLU 63 63 63 GLU GLU X . n A 1 64 SER 64 64 64 SER SER X . n A 1 65 ILE 65 65 65 ILE ILE X . n A 1 66 PRO 66 66 66 PRO PRO X . n A 1 67 LEU 67 67 67 LEU LEU X . n A 1 68 GLN 68 68 68 GLN GLN X . n A 1 69 PHE 69 69 69 PHE PHE X . n A 1 70 ARG 70 70 70 ARG ARG X . n A 1 71 PRO 71 71 71 PRO PRO X . n A 1 72 LEU 72 72 72 LEU LEU X . n A 1 73 LYS 73 73 73 LYS LYS X . n A 1 74 GLY 74 74 74 GLY GLY X . n A 1 75 ARG 75 75 75 ARG ARG X . n A 1 76 ILE 76 76 76 ILE ILE X . n A 1 77 ASN 77 77 77 ASN ASN X . n A 1 78 VAL 78 78 78 VAL VAL X . n A 1 79 VAL 79 79 79 VAL VAL X . n A 1 80 ILE 80 80 80 ILE ILE X . n A 1 81 THR 81 81 81 THR THR X . n A 1 82 ARG 82 82 82 ARG ARG X . n A 1 83 ASN 83 83 83 ASN ASN X . n A 1 84 GLU 84 84 84 GLU GLU X . n A 1 85 SER 85 85 85 SER SER X . n A 1 86 LEU 86 86 86 LEU LEU X . n A 1 87 ASP 87 87 87 ASP ASP X . n A 1 88 LEU 88 88 88 LEU LEU X . n A 1 89 GLY 89 89 89 GLY GLY X . n A 1 90 ASN 90 90 90 ASN ASN X . n A 1 91 GLY 91 91 91 GLY GLY X . n A 1 92 ILE 92 92 92 ILE ILE X . n A 1 93 HIS 93 93 93 HIS HIS X . n A 1 94 SER 94 94 94 SER SER X . n A 1 95 ALA 95 95 95 ALA ALA X . n A 1 96 LYS 96 96 96 LYS LYS X . n A 1 97 SER 97 97 97 SER SER X . n A 1 98 LEU 98 98 98 LEU LEU X . n A 1 99 ASP 99 99 99 ASP ASP X . n A 1 100 HIS 100 100 100 HIS HIS X . n A 1 101 ALA 101 101 101 ALA ALA X . n A 1 102 LEU 102 102 102 LEU LEU X . n A 1 103 GLU 103 103 103 GLU GLU X . n A 1 104 LEU 104 104 104 LEU LEU X . n A 1 105 LEU 105 105 105 LEU LEU X . n A 1 106 TYR 106 106 106 TYR TYR X . n A 1 107 ARG 107 107 107 ARG ARG X . n A 1 108 THR 108 108 108 THR THR X . n A 1 109 TYR 109 109 109 TYR TYR X . n A 1 110 GLY 110 110 110 GLY GLY X . n A 1 111 SER 111 111 111 SER SER X . n A 1 112 GLU 112 112 112 GLU GLU X . n A 1 113 SER 113 113 113 SER SER X . n A 1 114 SER 114 114 114 SER SER X . n A 1 115 VAL 115 115 115 VAL VAL X . n A 1 116 GLN 116 116 116 GLN GLN X . n A 1 117 ILE 117 117 117 ILE ILE X . n A 1 118 ASN 118 118 118 ASN ASN X . n A 1 119 ARG 119 119 119 ARG ARG X . n A 1 120 ILE 120 120 120 ILE ILE X . n A 1 121 PHE 121 121 121 PHE PHE X . n A 1 122 VAL 122 122 122 VAL VAL X . n A 1 123 ILE 123 123 123 ILE ILE X . n A 1 124 GLY 124 124 124 GLY GLY X . n A 1 125 GLY 125 125 125 GLY GLY X . n A 1 126 ALA 126 126 126 ALA ALA X . n A 1 127 GLN 127 127 127 GLN GLN X . n A 1 128 LEU 128 128 128 LEU LEU X . n A 1 129 TYR 129 129 129 TYR TYR X . n A 1 130 LYS 130 130 130 LYS LYS X . n A 1 131 ALA 131 131 131 ALA ALA X . n A 1 132 ALA 132 132 132 ALA ALA X . n A 1 133 MET 133 133 133 MET MET X . n A 1 134 ASP 134 134 134 ASP ASP X . n A 1 135 HIS 135 135 135 HIS HIS X . n A 1 136 PRO 136 136 136 PRO PRO X . n A 1 137 LYS 137 137 137 LYS LYS X . n A 1 138 LEU 138 138 138 LEU LEU X . n A 1 139 ASP 139 139 139 ASP ASP X . n A 1 140 ARG 140 140 140 ARG ARG X . n A 1 141 ILE 141 141 141 ILE ILE X . n A 1 142 MET 142 142 142 MET MET X . n A 1 143 ALA 143 143 143 ALA ALA X . n A 1 144 THR 144 144 144 THR THR X . n A 1 145 ILE 145 145 145 ILE ILE X . n A 1 146 ILE 146 146 146 ILE ILE X . n A 1 147 TYR 147 147 147 TYR TYR X . n A 1 148 LYS 148 148 148 LYS LYS X . n A 1 149 ASP 149 149 149 ASP ASP X . n A 1 150 ILE 150 150 150 ILE ILE X . n A 1 151 HIS 151 151 151 HIS HIS X . n A 1 152 CYS 152 152 152 CYS CYS X . n A 1 153 ASP 153 153 153 ASP ASP X . n A 1 154 VAL 154 154 154 VAL VAL X . n A 1 155 PHE 155 155 155 PHE PHE X . n A 1 156 PHE 156 156 156 PHE PHE X . n A 1 157 PRO 157 157 157 PRO PRO X . n A 1 158 LEU 158 158 158 LEU LEU X . n A 1 159 LYS 159 159 159 LYS LYS X . n A 1 160 PHE 160 160 160 PHE PHE X . n A 1 161 ARG 161 161 161 ARG ARG X . n A 1 162 ASP 162 162 162 ASP ASP X . n A 1 163 LYS 163 163 163 LYS LYS X . n A 1 164 GLU 164 164 164 GLU GLU X . n A 1 165 TRP 165 165 165 TRP TRP X . n A 1 166 SER 166 166 166 SER SER X . n A 1 167 SER 167 167 167 SER SER X . n A 1 168 VAL 168 168 168 VAL VAL X . n A 1 169 TRP 169 169 169 TRP TRP X . n A 1 170 LYS 170 170 170 LYS LYS X . n A 1 171 LYS 171 171 171 LYS LYS X . n A 1 172 GLU 172 172 172 GLU GLU X . n A 1 173 LYS 173 173 173 LYS LYS X . n A 1 174 HIS 174 174 174 HIS HIS X . n A 1 175 SER 175 175 175 SER SER X . n A 1 176 ASP 176 176 176 ASP ASP X . n A 1 177 LEU 177 177 177 LEU LEU X . n A 1 178 GLU 178 178 178 GLU GLU X . n A 1 179 SER 179 179 179 SER SER X . n A 1 180 TRP 180 180 180 TRP TRP X . n A 1 181 VAL 181 181 181 VAL VAL X . n A 1 182 GLY 182 182 182 GLY GLY X . n A 1 183 THR 183 183 183 THR THR X . n A 1 184 LYS 184 184 184 LYS LYS X . n A 1 185 VAL 185 185 185 VAL VAL X . n A 1 186 PRO 186 186 186 PRO PRO X . n A 1 187 HIS 187 187 187 HIS HIS X . n A 1 188 GLY 188 188 188 GLY GLY X . n A 1 189 LYS 189 189 189 LYS LYS X . n A 1 190 ILE 190 190 190 ILE ILE X . n A 1 191 ASN 191 191 191 ASN ASN X . n A 1 192 GLU 192 192 192 GLU GLU X . n A 1 193 ASP 193 193 193 ASP ASP X . n A 1 194 GLY 194 194 194 GLY GLY X . n A 1 195 PHE 195 195 195 PHE PHE X . n A 1 196 ASP 196 196 196 ASP ASP X . n A 1 197 TYR 197 197 197 TYR TYR X . n A 1 198 GLU 198 198 198 GLU GLU X . n A 1 199 PHE 199 199 199 PHE PHE X . n A 1 200 GLU 200 200 200 GLU GLU X . n A 1 201 MET 201 201 201 MET MET X . n A 1 202 TRP 202 202 202 TRP TRP X . n A 1 203 THR 203 203 203 THR THR X . n A 1 204 ARG 204 204 204 ARG ARG X . n A 1 205 ASP 205 205 205 ASP ASP X . n A 1 206 LEU 206 206 206 LEU LEU X . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 D2J 1 207 207 D2J D2J X . C 3 NDP 1 208 208 NDP NDP X . D 4 HOH 1 209 1 HOH HOH X . D 4 HOH 2 210 2 HOH HOH X . D 4 HOH 3 211 3 HOH HOH X . D 4 HOH 4 212 4 HOH HOH X . D 4 HOH 5 213 5 HOH HOH X . D 4 HOH 6 214 6 HOH HOH X . D 4 HOH 7 215 7 HOH HOH X . D 4 HOH 8 216 8 HOH HOH X . D 4 HOH 9 217 9 HOH HOH X . D 4 HOH 10 218 10 HOH HOH X . D 4 HOH 11 219 11 HOH HOH X . D 4 HOH 12 220 12 HOH HOH X . D 4 HOH 13 221 13 HOH HOH X . D 4 HOH 14 222 14 HOH HOH X . D 4 HOH 15 223 15 HOH HOH X . D 4 HOH 16 224 16 HOH HOH X . D 4 HOH 17 225 17 HOH HOH X . D 4 HOH 18 226 18 HOH HOH X . D 4 HOH 19 227 19 HOH HOH X . D 4 HOH 20 228 20 HOH HOH X . D 4 HOH 21 229 21 HOH HOH X . D 4 HOH 22 230 22 HOH HOH X . D 4 HOH 23 231 23 HOH HOH X . D 4 HOH 24 232 24 HOH HOH X . D 4 HOH 25 233 25 HOH HOH X . D 4 HOH 26 234 26 HOH HOH X . D 4 HOH 27 235 27 HOH HOH X . D 4 HOH 28 236 28 HOH HOH X . D 4 HOH 29 237 29 HOH HOH X . D 4 HOH 30 238 30 HOH HOH X . D 4 HOH 31 239 31 HOH HOH X . D 4 HOH 32 240 32 HOH HOH X . D 4 HOH 33 241 33 HOH HOH X . D 4 HOH 34 242 34 HOH HOH X . D 4 HOH 35 243 35 HOH HOH X . D 4 HOH 36 244 36 HOH HOH X . D 4 HOH 37 245 37 HOH HOH X . D 4 HOH 38 246 38 HOH HOH X . D 4 HOH 39 247 39 HOH HOH X . D 4 HOH 40 248 40 HOH HOH X . D 4 HOH 41 249 41 HOH HOH X . D 4 HOH 42 250 42 HOH HOH X . D 4 HOH 43 251 43 HOH HOH X . D 4 HOH 44 252 44 HOH HOH X . D 4 HOH 45 253 45 HOH HOH X . D 4 HOH 46 254 46 HOH HOH X . D 4 HOH 47 255 47 HOH HOH X . D 4 HOH 48 256 48 HOH HOH X . D 4 HOH 49 257 49 HOH HOH X . D 4 HOH 50 258 50 HOH HOH X . D 4 HOH 51 259 51 HOH HOH X . D 4 HOH 52 260 52 HOH HOH X . D 4 HOH 53 261 53 HOH HOH X . D 4 HOH 54 262 54 HOH HOH X . D 4 HOH 55 263 55 HOH HOH X . D 4 HOH 56 264 56 HOH HOH X . D 4 HOH 57 265 57 HOH HOH X . D 4 HOH 58 266 58 HOH HOH X . D 4 HOH 59 267 59 HOH HOH X . D 4 HOH 60 268 60 HOH HOH X . D 4 HOH 61 269 61 HOH HOH X . D 4 HOH 62 270 62 HOH HOH X . D 4 HOH 63 271 63 HOH HOH X . D 4 HOH 64 272 64 HOH HOH X . D 4 HOH 65 273 65 HOH HOH X . D 4 HOH 66 274 66 HOH HOH X . D 4 HOH 67 275 67 HOH HOH X . D 4 HOH 68 276 68 HOH HOH X . D 4 HOH 69 277 69 HOH HOH X . D 4 HOH 70 278 70 HOH HOH X . D 4 HOH 71 279 71 HOH HOH X . D 4 HOH 72 280 72 HOH HOH X . D 4 HOH 73 281 73 HOH HOH X . D 4 HOH 74 282 74 HOH HOH X . D 4 HOH 75 283 75 HOH HOH X . D 4 HOH 76 284 76 HOH HOH X . D 4 HOH 77 285 77 HOH HOH X . D 4 HOH 78 286 78 HOH HOH X . D 4 HOH 79 287 79 HOH HOH X . D 4 HOH 80 288 80 HOH HOH X . D 4 HOH 81 289 81 HOH HOH X . D 4 HOH 82 290 82 HOH HOH X . D 4 HOH 83 291 83 HOH HOH X . D 4 HOH 84 292 84 HOH HOH X . D 4 HOH 85 293 85 HOH HOH X . D 4 HOH 86 294 86 HOH HOH X . D 4 HOH 87 295 87 HOH HOH X . D 4 HOH 88 296 88 HOH HOH X . D 4 HOH 89 297 89 HOH HOH X . D 4 HOH 90 298 90 HOH HOH X . D 4 HOH 91 299 91 HOH HOH X . D 4 HOH 92 300 92 HOH HOH X . D 4 HOH 93 301 93 HOH HOH X . D 4 HOH 94 302 94 HOH HOH X . D 4 HOH 95 303 96 HOH HOH X . D 4 HOH 96 304 97 HOH HOH X . D 4 HOH 97 305 98 HOH HOH X . D 4 HOH 98 306 99 HOH HOH X . D 4 HOH 99 307 100 HOH HOH X . D 4 HOH 100 308 101 HOH HOH X . D 4 HOH 101 309 102 HOH HOH X . D 4 HOH 102 310 103 HOH HOH X . D 4 HOH 103 311 104 HOH HOH X . D 4 HOH 104 312 105 HOH HOH X . D 4 HOH 105 313 106 HOH HOH X . D 4 HOH 106 314 107 HOH HOH X . D 4 HOH 107 315 108 HOH HOH X . D 4 HOH 108 316 109 HOH HOH X . D 4 HOH 109 317 110 HOH HOH X . D 4 HOH 110 318 111 HOH HOH X . D 4 HOH 111 319 112 HOH HOH X . D 4 HOH 112 320 113 HOH HOH X . D 4 HOH 113 321 114 HOH HOH X . D 4 HOH 114 322 115 HOH HOH X . D 4 HOH 115 323 116 HOH HOH X . D 4 HOH 116 324 117 HOH HOH X . D 4 HOH 117 325 118 HOH HOH X . D 4 HOH 118 326 119 HOH HOH X . D 4 HOH 119 327 120 HOH HOH X . D 4 HOH 120 328 121 HOH HOH X . D 4 HOH 121 329 122 HOH HOH X . D 4 HOH 122 330 123 HOH HOH X . D 4 HOH 123 331 124 HOH HOH X . D 4 HOH 124 332 125 HOH HOH X . D 4 HOH 125 333 126 HOH HOH X . D 4 HOH 126 334 127 HOH HOH X . D 4 HOH 127 335 128 HOH HOH X . D 4 HOH 128 336 129 HOH HOH X . D 4 HOH 129 337 130 HOH HOH X . D 4 HOH 130 338 131 HOH HOH X . D 4 HOH 131 339 132 HOH HOH X . D 4 HOH 132 340 133 HOH HOH X . D 4 HOH 133 341 134 HOH HOH X . D 4 HOH 134 342 135 HOH HOH X . D 4 HOH 135 343 136 HOH HOH X . D 4 HOH 136 344 137 HOH HOH X . D 4 HOH 137 345 138 HOH HOH X . D 4 HOH 138 346 139 HOH HOH X . D 4 HOH 139 347 140 HOH HOH X . D 4 HOH 140 348 141 HOH HOH X . D 4 HOH 141 349 142 HOH HOH X . D 4 HOH 142 350 143 HOH HOH X . D 4 HOH 143 351 144 HOH HOH X . D 4 HOH 144 352 145 HOH HOH X . D 4 HOH 145 353 146 HOH HOH X . D 4 HOH 146 354 147 HOH HOH X . D 4 HOH 147 355 148 HOH HOH X . D 4 HOH 148 356 149 HOH HOH X . D 4 HOH 149 357 150 HOH HOH X . D 4 HOH 150 358 151 HOH HOH X . D 4 HOH 151 359 152 HOH HOH X . D 4 HOH 152 360 153 HOH HOH X . D 4 HOH 153 361 154 HOH HOH X . D 4 HOH 154 362 155 HOH HOH X . D 4 HOH 155 363 156 HOH HOH X . D 4 HOH 156 364 157 HOH HOH X . D 4 HOH 157 365 158 HOH HOH X . D 4 HOH 158 366 159 HOH HOH X . D 4 HOH 159 367 160 HOH HOH X . D 4 HOH 160 368 161 HOH HOH X . D 4 HOH 161 369 162 HOH HOH X . D 4 HOH 162 370 163 HOH HOH X . D 4 HOH 163 371 164 HOH HOH X . D 4 HOH 164 372 165 HOH HOH X . D 4 HOH 165 373 166 HOH HOH X . D 4 HOH 166 374 167 HOH HOH X . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-12-29 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-08 4 'Structure model' 1 3 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' Advisory 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Derived calculations' 8 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_unobs_or_zero_occ_residues 2 3 'Structure model' software 3 4 'Structure model' chem_comp_atom 4 4 'Structure model' chem_comp_bond 5 4 'Structure model' database_2 6 4 'Structure model' pdbx_initial_refinement_model 7 4 'Structure model' pdbx_unobs_or_zero_occ_residues 8 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.5.0088 ? 3 HKL-2000 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O X GLY 89 ? ? N X ASN 90 ? ? 1.12 2 1 O X LEU 88 ? ? OD1 X ASN 90 ? ? 1.15 3 1 C X GLY 89 ? ? CA X ASN 90 ? ? 1.76 4 1 N X LEU 86 ? ? O X HOH 346 ? ? 1.92 5 1 O X ARG 21 ? ? OD2 X ASP 153 ? ? 1.99 6 1 CB X ASP 87 ? ? O X HOH 357 ? ? 2.07 7 1 C X LEU 88 ? ? O X HOH 357 ? ? 2.07 8 1 O X LEU 88 ? ? O X HOH 357 ? ? 2.09 9 1 O X LEU 88 ? ? CG X ASN 90 ? ? 2.10 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O X HOH 221 ? ? 1_555 O X HOH 267 ? ? 1_545 2.19 2 1 O X HOH 243 ? ? 1_555 O X HOH 338 ? ? 1_455 2.19 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C X ASN 83 ? ? N X GLU 84 ? ? 0.867 1.336 -0.469 0.023 Y 2 1 C X GLY 89 ? ? N X ASN 90 ? ? 0.443 1.336 -0.893 0.023 Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA X ASN 83 ? ? C X ASN 83 ? ? N X GLU 84 ? ? 80.95 117.20 -36.25 2.20 Y 2 1 O X ASN 83 ? ? C X ASN 83 ? ? N X GLU 84 ? ? 41.47 122.70 -81.23 1.60 Y 3 1 C X ASN 83 ? ? N X GLU 84 ? ? CA X GLU 84 ? ? 85.16 121.70 -36.54 2.50 Y 4 1 N X LEU 88 ? ? CA X LEU 88 ? ? C X LEU 88 ? ? 93.30 111.00 -17.70 2.70 N 5 1 CA X GLY 89 ? ? C X GLY 89 ? ? N X ASN 90 ? ? 158.34 117.20 41.14 2.20 Y 6 1 O X GLY 89 ? ? C X GLY 89 ? ? N X ASN 90 ? ? 65.44 122.70 -57.26 1.60 Y 7 1 NE X ARG 107 ? ? CZ X ARG 107 ? ? NH1 X ARG 107 ? ? 116.70 120.30 -3.60 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN X 2 ? ? 175.15 -15.85 2 1 GLN X 4 ? ? -51.81 -71.32 3 1 ARG X 21 ? ? -134.56 -65.55 4 1 ASN X 23 ? ? 38.10 37.37 5 1 PRO X 26 ? ? -68.43 4.69 6 1 ASN X 83 ? ? -43.30 161.66 7 1 GLU X 84 ? ? -117.86 74.77 8 1 SER X 85 ? ? -49.65 150.92 9 1 LEU X 86 ? ? 66.86 -32.14 10 1 ASP X 87 ? ? -11.95 -34.73 11 1 LEU X 88 ? ? 91.87 101.26 12 1 ASN X 90 ? ? 147.26 10.90 13 1 TYR X 109 ? ? -114.58 61.01 14 1 SER X 111 ? ? -22.22 -42.75 15 1 SER X 113 ? ? -37.90 150.52 16 1 ASN X 118 ? ? -98.68 -79.27 17 1 ASP X 193 ? ? 38.16 52.35 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 ASP X 87 ? ? LEU X 88 ? ? -142.99 2 1 GLY X 89 ? ? ASN X 90 ? ? -128.95 3 1 GLY X 124 ? ? GLY X 125 ? ? -135.24 # loop_ _pdbx_validate_main_chain_plane.id _pdbx_validate_main_chain_plane.PDB_model_num _pdbx_validate_main_chain_plane.auth_comp_id _pdbx_validate_main_chain_plane.auth_asym_id _pdbx_validate_main_chain_plane.auth_seq_id _pdbx_validate_main_chain_plane.PDB_ins_code _pdbx_validate_main_chain_plane.label_alt_id _pdbx_validate_main_chain_plane.improper_torsion_angle 1 1 ASN X 83 ? ? 15.45 2 1 GLY X 89 ? ? -69.75 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id C2B _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id X _pdbx_validate_chiral.auth_comp_id NDP _pdbx_validate_chiral.auth_seq_id 208 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details 'WRONG HAND' _pdbx_validate_chiral.omega . # loop_ _pdbx_validate_polymer_linkage.id _pdbx_validate_polymer_linkage.PDB_model_num _pdbx_validate_polymer_linkage.auth_atom_id_1 _pdbx_validate_polymer_linkage.auth_asym_id_1 _pdbx_validate_polymer_linkage.auth_comp_id_1 _pdbx_validate_polymer_linkage.auth_seq_id_1 _pdbx_validate_polymer_linkage.PDB_ins_code_1 _pdbx_validate_polymer_linkage.label_alt_id_1 _pdbx_validate_polymer_linkage.auth_atom_id_2 _pdbx_validate_polymer_linkage.auth_asym_id_2 _pdbx_validate_polymer_linkage.auth_comp_id_2 _pdbx_validate_polymer_linkage.auth_seq_id_2 _pdbx_validate_polymer_linkage.PDB_ins_code_2 _pdbx_validate_polymer_linkage.label_alt_id_2 _pdbx_validate_polymer_linkage.dist 1 1 C X ASN 83 ? ? N X GLU 84 ? ? 0.87 2 1 C X GLY 89 ? ? N X ASN 90 ? ? 0.44 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 0 X ASN 83 ? A ASN 83 2 1 Y 0 X GLU 84 ? A GLU 84 3 1 Y 0 X SER 85 ? A SER 85 4 1 Y 0 X LEU 86 ? A LEU 86 5 1 Y 0 X ASP 87 ? A ASP 87 6 1 Y 0 X LEU 88 ? A LEU 88 7 1 Y 0 X GLY 89 ? A GLY 89 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 D2J N1 N Y N 88 D2J C2 C Y N 89 D2J N3 N Y N 90 D2J C4 C Y N 91 D2J C5 C Y N 92 D2J C6 C Y N 93 D2J CAA C N N 94 D2J CAB C N N 95 D2J NAC N N N 96 D2J NAD N N N 97 D2J OAE O N N 98 D2J OAF O N N 99 D2J CAG C Y N 100 D2J CAH C Y N 101 D2J CAI C Y N 102 D2J CAJ C Y N 103 D2J CAK C N N 104 D2J CAL C N N 105 D2J CAM C N N 106 D2J CAN C N N 107 D2J CAO C N N 108 D2J CAP C N N 109 D2J NAQ N Y N 110 D2J OAT O N N 111 D2J OAU O N N 112 D2J CAV C N N 113 D2J CAY C Y N 114 D2J CAZ C Y N 115 D2J CBA C Y N 116 D2J CBB C Y N 117 D2J CBC C Y N 118 D2J HAA H N N 119 D2J HAAA H N N 120 D2J HAAB H N N 121 D2J HAB H N N 122 D2J HABA H N N 123 D2J HABB H N N 124 D2J HNAC H N N 125 D2J HNAA H N N 126 D2J HNAD H N N 127 D2J HNAB H N N 128 D2J HAG H N N 129 D2J HAH H N N 130 D2J HAI H N N 131 D2J HAJ H N N 132 D2J HAK H N N 133 D2J HAKA H N N 134 D2J HAL H N N 135 D2J HALA H N N 136 D2J HAM H N N 137 D2J HAMA H N N 138 D2J HAN H N N 139 D2J HANA H N N 140 D2J HAO H N N 141 D2J HAOA H N N 142 D2J HAP H N N 143 D2J HAPA H N N 144 D2J H27 H N N 145 GLN N N N N 146 GLN CA C N S 147 GLN C C N N 148 GLN O O N N 149 GLN CB C N N 150 GLN CG C N N 151 GLN CD C N N 152 GLN OE1 O N N 153 GLN NE2 N N N 154 GLN OXT O N N 155 GLN H H N N 156 GLN H2 H N N 157 GLN HA H N N 158 GLN HB2 H N N 159 GLN HB3 H N N 160 GLN HG2 H N N 161 GLN HG3 H N N 162 GLN HE21 H N N 163 GLN HE22 H N N 164 GLN HXT H N N 165 GLU N N N N 166 GLU CA C N S 167 GLU C C N N 168 GLU O O N N 169 GLU CB C N N 170 GLU CG C N N 171 GLU CD C N N 172 GLU OE1 O N N 173 GLU OE2 O N N 174 GLU OXT O N N 175 GLU H H N N 176 GLU H2 H N N 177 GLU HA H N N 178 GLU HB2 H N N 179 GLU HB3 H N N 180 GLU HG2 H N N 181 GLU HG3 H N N 182 GLU HE2 H N N 183 GLU HXT H N N 184 GLY N N N N 185 GLY CA C N N 186 GLY C C N N 187 GLY O O N N 188 GLY OXT O N N 189 GLY H H N N 190 GLY H2 H N N 191 GLY HA2 H N N 192 GLY HA3 H N N 193 GLY HXT H N N 194 HIS N N N N 195 HIS CA C N S 196 HIS C C N N 197 HIS O O N N 198 HIS CB C N N 199 HIS CG C Y N 200 HIS ND1 N Y N 201 HIS CD2 C Y N 202 HIS CE1 C Y N 203 HIS NE2 N Y N 204 HIS OXT O N N 205 HIS H H N N 206 HIS H2 H N N 207 HIS HA H N N 208 HIS HB2 H N N 209 HIS HB3 H N N 210 HIS HD1 H N N 211 HIS HD2 H N N 212 HIS HE1 H N N 213 HIS HE2 H N N 214 HIS HXT H N N 215 HOH O O N N 216 HOH H1 H N N 217 HOH H2 H N N 218 ILE N N N N 219 ILE CA C N S 220 ILE C C N N 221 ILE O O N N 222 ILE CB C N S 223 ILE CG1 C N N 224 ILE CG2 C N N 225 ILE CD1 C N N 226 ILE OXT O N N 227 ILE H H N N 228 ILE H2 H N N 229 ILE HA H N N 230 ILE HB H N N 231 ILE HG12 H N N 232 ILE HG13 H N N 233 ILE HG21 H N N 234 ILE HG22 H N N 235 ILE HG23 H N N 236 ILE HD11 H N N 237 ILE HD12 H N N 238 ILE HD13 H N N 239 ILE HXT H N N 240 LEU N N N N 241 LEU CA C N S 242 LEU C C N N 243 LEU O O N N 244 LEU CB C N N 245 LEU CG C N N 246 LEU CD1 C N N 247 LEU CD2 C N N 248 LEU OXT O N N 249 LEU H H N N 250 LEU H2 H N N 251 LEU HA H N N 252 LEU HB2 H N N 253 LEU HB3 H N N 254 LEU HG H N N 255 LEU HD11 H N N 256 LEU HD12 H N N 257 LEU HD13 H N N 258 LEU HD21 H N N 259 LEU HD22 H N N 260 LEU HD23 H N N 261 LEU HXT H N N 262 LYS N N N N 263 LYS CA C N S 264 LYS C C N N 265 LYS O O N N 266 LYS CB C N N 267 LYS CG C N N 268 LYS CD C N N 269 LYS CE C N N 270 LYS NZ N N N 271 LYS OXT O N N 272 LYS H H N N 273 LYS H2 H N N 274 LYS HA H N N 275 LYS HB2 H N N 276 LYS HB3 H N N 277 LYS HG2 H N N 278 LYS HG3 H N N 279 LYS HD2 H N N 280 LYS HD3 H N N 281 LYS HE2 H N N 282 LYS HE3 H N N 283 LYS HZ1 H N N 284 LYS HZ2 H N N 285 LYS HZ3 H N N 286 LYS HXT H N N 287 MET N N N N 288 MET CA C N S 289 MET C C N N 290 MET O O N N 291 MET CB C N N 292 MET CG C N N 293 MET SD S N N 294 MET CE C N N 295 MET OXT O N N 296 MET H H N N 297 MET H2 H N N 298 MET HA H N N 299 MET HB2 H N N 300 MET HB3 H N N 301 MET HG2 H N N 302 MET HG3 H N N 303 MET HE1 H N N 304 MET HE2 H N N 305 MET HE3 H N N 306 MET HXT H N N 307 NDP PA P N S 308 NDP O1A O N N 309 NDP O2A O N N 310 NDP O5B O N N 311 NDP C5B C N N 312 NDP C4B C N R 313 NDP O4B O N N 314 NDP C3B C N R 315 NDP O3B O N N 316 NDP C2B C N R 317 NDP O2B O N N 318 NDP C1B C N R 319 NDP N9A N Y N 320 NDP C8A C Y N 321 NDP N7A N Y N 322 NDP C5A C Y N 323 NDP C6A C Y N 324 NDP N6A N N N 325 NDP N1A N Y N 326 NDP C2A C Y N 327 NDP N3A N Y N 328 NDP C4A C Y N 329 NDP O3 O N N 330 NDP PN P N S 331 NDP O1N O N N 332 NDP O2N O N N 333 NDP O5D O N N 334 NDP C5D C N N 335 NDP C4D C N R 336 NDP O4D O N N 337 NDP C3D C N S 338 NDP O3D O N N 339 NDP C2D C N R 340 NDP O2D O N N 341 NDP C1D C N R 342 NDP N1N N N N 343 NDP C2N C N N 344 NDP C3N C N N 345 NDP C7N C N N 346 NDP O7N O N N 347 NDP N7N N N N 348 NDP C4N C N N 349 NDP C5N C N N 350 NDP C6N C N N 351 NDP P2B P N N 352 NDP O1X O N N 353 NDP O2X O N N 354 NDP O3X O N N 355 NDP HOA2 H N N 356 NDP H51A H N N 357 NDP H52A H N N 358 NDP H4B H N N 359 NDP H3B H N N 360 NDP HO3A H N N 361 NDP H2B H N N 362 NDP H1B H N N 363 NDP H8A H N N 364 NDP H61A H N N 365 NDP H62A H N N 366 NDP H2A H N N 367 NDP H21N H N N 368 NDP H51N H N N 369 NDP H52N H N N 370 NDP H4D H N N 371 NDP H3D H N N 372 NDP HO3N H N N 373 NDP H2D H N N 374 NDP HO2N H N N 375 NDP H1D H N N 376 NDP H2N H N N 377 NDP H71N H N N 378 NDP H72N H N N 379 NDP H41N H N N 380 NDP H42N H N N 381 NDP H5N H N N 382 NDP H6N H N N 383 NDP HOP2 H N N 384 NDP HOP3 H N N 385 PHE N N N N 386 PHE CA C N S 387 PHE C C N N 388 PHE O O N N 389 PHE CB C N N 390 PHE CG C Y N 391 PHE CD1 C Y N 392 PHE CD2 C Y N 393 PHE CE1 C Y N 394 PHE CE2 C Y N 395 PHE CZ C Y N 396 PHE OXT O N N 397 PHE H H N N 398 PHE H2 H N N 399 PHE HA H N N 400 PHE HB2 H N N 401 PHE HB3 H N N 402 PHE HD1 H N N 403 PHE HD2 H N N 404 PHE HE1 H N N 405 PHE HE2 H N N 406 PHE HZ H N N 407 PHE HXT H N N 408 PRO N N N N 409 PRO CA C N S 410 PRO C C N N 411 PRO O O N N 412 PRO CB C N N 413 PRO CG C N N 414 PRO CD C N N 415 PRO OXT O N N 416 PRO H H N N 417 PRO HA H N N 418 PRO HB2 H N N 419 PRO HB3 H N N 420 PRO HG2 H N N 421 PRO HG3 H N N 422 PRO HD2 H N N 423 PRO HD3 H N N 424 PRO HXT H N N 425 SER N N N N 426 SER CA C N S 427 SER C C N N 428 SER O O N N 429 SER CB C N N 430 SER OG O N N 431 SER OXT O N N 432 SER H H N N 433 SER H2 H N N 434 SER HA H N N 435 SER HB2 H N N 436 SER HB3 H N N 437 SER HG H N N 438 SER HXT H N N 439 THR N N N N 440 THR CA C N S 441 THR C C N N 442 THR O O N N 443 THR CB C N R 444 THR OG1 O N N 445 THR CG2 C N N 446 THR OXT O N N 447 THR H H N N 448 THR H2 H N N 449 THR HA H N N 450 THR HB H N N 451 THR HG1 H N N 452 THR HG21 H N N 453 THR HG22 H N N 454 THR HG23 H N N 455 THR HXT H N N 456 TRP N N N N 457 TRP CA C N S 458 TRP C C N N 459 TRP O O N N 460 TRP CB C N N 461 TRP CG C Y N 462 TRP CD1 C Y N 463 TRP CD2 C Y N 464 TRP NE1 N Y N 465 TRP CE2 C Y N 466 TRP CE3 C Y N 467 TRP CZ2 C Y N 468 TRP CZ3 C Y N 469 TRP CH2 C Y N 470 TRP OXT O N N 471 TRP H H N N 472 TRP H2 H N N 473 TRP HA H N N 474 TRP HB2 H N N 475 TRP HB3 H N N 476 TRP HD1 H N N 477 TRP HE1 H N N 478 TRP HE3 H N N 479 TRP HZ2 H N N 480 TRP HZ3 H N N 481 TRP HH2 H N N 482 TRP HXT H N N 483 TYR N N N N 484 TYR CA C N S 485 TYR C C N N 486 TYR O O N N 487 TYR CB C N N 488 TYR CG C Y N 489 TYR CD1 C Y N 490 TYR CD2 C Y N 491 TYR CE1 C Y N 492 TYR CE2 C Y N 493 TYR CZ C Y N 494 TYR OH O N N 495 TYR OXT O N N 496 TYR H H N N 497 TYR H2 H N N 498 TYR HA H N N 499 TYR HB2 H N N 500 TYR HB3 H N N 501 TYR HD1 H N N 502 TYR HD2 H N N 503 TYR HE1 H N N 504 TYR HE2 H N N 505 TYR HH H N N 506 TYR HXT H N N 507 VAL N N N N 508 VAL CA C N S 509 VAL C C N N 510 VAL O O N N 511 VAL CB C N N 512 VAL CG1 C N N 513 VAL CG2 C N N 514 VAL OXT O N N 515 VAL H H N N 516 VAL H2 H N N 517 VAL HA H N N 518 VAL HB H N N 519 VAL HG11 H N N 520 VAL HG12 H N N 521 VAL HG13 H N N 522 VAL HG21 H N N 523 VAL HG22 H N N 524 VAL HG23 H N N 525 VAL HXT H N N 526 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 D2J N1 C2 doub Y N 83 D2J N1 C6 sing Y N 84 D2J C2 N3 sing Y N 85 D2J C2 NAC sing N N 86 D2J N3 C4 doub Y N 87 D2J C4 C5 sing Y N 88 D2J C4 NAQ sing Y N 89 D2J C5 C6 doub Y N 90 D2J C5 CAY sing Y N 91 D2J C6 NAD sing N N 92 D2J CAA OAT sing N N 93 D2J CAA HAA sing N N 94 D2J CAA HAAA sing N N 95 D2J CAA HAAB sing N N 96 D2J CAB CAY sing N N 97 D2J CAB HAB sing N N 98 D2J CAB HABA sing N N 99 D2J CAB HABB sing N N 100 D2J NAC HNAC sing N N 101 D2J NAC HNAA sing N N 102 D2J NAD HNAD sing N N 103 D2J NAD HNAB sing N N 104 D2J OAE CAV doub N N 105 D2J OAF CAV sing N N 106 D2J CAG CAH doub Y N 107 D2J CAG CAZ sing Y N 108 D2J CAG HAG sing N N 109 D2J CAH CBC sing Y N 110 D2J CAH HAH sing N N 111 D2J CAI NAQ doub Y N 112 D2J CAI CBA sing Y N 113 D2J CAI HAI sing N N 114 D2J CAJ CAZ doub Y N 115 D2J CAJ CBB sing Y N 116 D2J CAJ HAJ sing N N 117 D2J CAK CAL sing N N 118 D2J CAK CAM sing N N 119 D2J CAK HAK sing N N 120 D2J CAK HAKA sing N N 121 D2J CAL CAN sing N N 122 D2J CAL HAL sing N N 123 D2J CAL HALA sing N N 124 D2J CAM CAO sing N N 125 D2J CAM HAM sing N N 126 D2J CAM HAMA sing N N 127 D2J CAN OAU sing N N 128 D2J CAN HAN sing N N 129 D2J CAN HANA sing N N 130 D2J CAO CAV sing N N 131 D2J CAO HAO sing N N 132 D2J CAO HAOA sing N N 133 D2J CAP CBA sing N N 134 D2J CAP CBB sing N N 135 D2J CAP HAP sing N N 136 D2J CAP HAPA sing N N 137 D2J OAT CBC sing N N 138 D2J OAU CAZ sing N N 139 D2J CAY CBA doub Y N 140 D2J CBB CBC doub Y N 141 D2J OAF H27 sing N N 142 GLN N CA sing N N 143 GLN N H sing N N 144 GLN N H2 sing N N 145 GLN CA C sing N N 146 GLN CA CB sing N N 147 GLN CA HA sing N N 148 GLN C O doub N N 149 GLN C OXT sing N N 150 GLN CB CG sing N N 151 GLN CB HB2 sing N N 152 GLN CB HB3 sing N N 153 GLN CG CD sing N N 154 GLN CG HG2 sing N N 155 GLN CG HG3 sing N N 156 GLN CD OE1 doub N N 157 GLN CD NE2 sing N N 158 GLN NE2 HE21 sing N N 159 GLN NE2 HE22 sing N N 160 GLN OXT HXT sing N N 161 GLU N CA sing N N 162 GLU N H sing N N 163 GLU N H2 sing N N 164 GLU CA C sing N N 165 GLU CA CB sing N N 166 GLU CA HA sing N N 167 GLU C O doub N N 168 GLU C OXT sing N N 169 GLU CB CG sing N N 170 GLU CB HB2 sing N N 171 GLU CB HB3 sing N N 172 GLU CG CD sing N N 173 GLU CG HG2 sing N N 174 GLU CG HG3 sing N N 175 GLU CD OE1 doub N N 176 GLU CD OE2 sing N N 177 GLU OE2 HE2 sing N N 178 GLU OXT HXT sing N N 179 GLY N CA sing N N 180 GLY N H sing N N 181 GLY N H2 sing N N 182 GLY CA C sing N N 183 GLY CA HA2 sing N N 184 GLY CA HA3 sing N N 185 GLY C O doub N N 186 GLY C OXT sing N N 187 GLY OXT HXT sing N N 188 HIS N CA sing N N 189 HIS N H sing N N 190 HIS N H2 sing N N 191 HIS CA C sing N N 192 HIS CA CB sing N N 193 HIS CA HA sing N N 194 HIS C O doub N N 195 HIS C OXT sing N N 196 HIS CB CG sing N N 197 HIS CB HB2 sing N N 198 HIS CB HB3 sing N N 199 HIS CG ND1 sing Y N 200 HIS CG CD2 doub Y N 201 HIS ND1 CE1 doub Y N 202 HIS ND1 HD1 sing N N 203 HIS CD2 NE2 sing Y N 204 HIS CD2 HD2 sing N N 205 HIS CE1 NE2 sing Y N 206 HIS CE1 HE1 sing N N 207 HIS NE2 HE2 sing N N 208 HIS OXT HXT sing N N 209 HOH O H1 sing N N 210 HOH O H2 sing N N 211 ILE N CA sing N N 212 ILE N H sing N N 213 ILE N H2 sing N N 214 ILE CA C sing N N 215 ILE CA CB sing N N 216 ILE CA HA sing N N 217 ILE C O doub N N 218 ILE C OXT sing N N 219 ILE CB CG1 sing N N 220 ILE CB CG2 sing N N 221 ILE CB HB sing N N 222 ILE CG1 CD1 sing N N 223 ILE CG1 HG12 sing N N 224 ILE CG1 HG13 sing N N 225 ILE CG2 HG21 sing N N 226 ILE CG2 HG22 sing N N 227 ILE CG2 HG23 sing N N 228 ILE CD1 HD11 sing N N 229 ILE CD1 HD12 sing N N 230 ILE CD1 HD13 sing N N 231 ILE OXT HXT sing N N 232 LEU N CA sing N N 233 LEU N H sing N N 234 LEU N H2 sing N N 235 LEU CA C sing N N 236 LEU CA CB sing N N 237 LEU CA HA sing N N 238 LEU C O doub N N 239 LEU C OXT sing N N 240 LEU CB CG sing N N 241 LEU CB HB2 sing N N 242 LEU CB HB3 sing N N 243 LEU CG CD1 sing N N 244 LEU CG CD2 sing N N 245 LEU CG HG sing N N 246 LEU CD1 HD11 sing N N 247 LEU CD1 HD12 sing N N 248 LEU CD1 HD13 sing N N 249 LEU CD2 HD21 sing N N 250 LEU CD2 HD22 sing N N 251 LEU CD2 HD23 sing N N 252 LEU OXT HXT sing N N 253 LYS N CA sing N N 254 LYS N H sing N N 255 LYS N H2 sing N N 256 LYS CA C sing N N 257 LYS CA CB sing N N 258 LYS CA HA sing N N 259 LYS C O doub N N 260 LYS C OXT sing N N 261 LYS CB CG sing N N 262 LYS CB HB2 sing N N 263 LYS CB HB3 sing N N 264 LYS CG CD sing N N 265 LYS CG HG2 sing N N 266 LYS CG HG3 sing N N 267 LYS CD CE sing N N 268 LYS CD HD2 sing N N 269 LYS CD HD3 sing N N 270 LYS CE NZ sing N N 271 LYS CE HE2 sing N N 272 LYS CE HE3 sing N N 273 LYS NZ HZ1 sing N N 274 LYS NZ HZ2 sing N N 275 LYS NZ HZ3 sing N N 276 LYS OXT HXT sing N N 277 MET N CA sing N N 278 MET N H sing N N 279 MET N H2 sing N N 280 MET CA C sing N N 281 MET CA CB sing N N 282 MET CA HA sing N N 283 MET C O doub N N 284 MET C OXT sing N N 285 MET CB CG sing N N 286 MET CB HB2 sing N N 287 MET CB HB3 sing N N 288 MET CG SD sing N N 289 MET CG HG2 sing N N 290 MET CG HG3 sing N N 291 MET SD CE sing N N 292 MET CE HE1 sing N N 293 MET CE HE2 sing N N 294 MET CE HE3 sing N N 295 MET OXT HXT sing N N 296 NDP PA O1A doub N N 297 NDP PA O2A sing N N 298 NDP PA O5B sing N N 299 NDP PA O3 sing N N 300 NDP O2A HOA2 sing N N 301 NDP O5B C5B sing N N 302 NDP C5B C4B sing N N 303 NDP C5B H51A sing N N 304 NDP C5B H52A sing N N 305 NDP C4B O4B sing N N 306 NDP C4B C3B sing N N 307 NDP C4B H4B sing N N 308 NDP O4B C1B sing N N 309 NDP C3B O3B sing N N 310 NDP C3B C2B sing N N 311 NDP C3B H3B sing N N 312 NDP O3B HO3A sing N N 313 NDP C2B O2B sing N N 314 NDP C2B C1B sing N N 315 NDP C2B H2B sing N N 316 NDP O2B P2B sing N N 317 NDP C1B N9A sing N N 318 NDP C1B H1B sing N N 319 NDP N9A C8A sing Y N 320 NDP N9A C4A sing Y N 321 NDP C8A N7A doub Y N 322 NDP C8A H8A sing N N 323 NDP N7A C5A sing Y N 324 NDP C5A C6A sing Y N 325 NDP C5A C4A doub Y N 326 NDP C6A N6A sing N N 327 NDP C6A N1A doub Y N 328 NDP N6A H61A sing N N 329 NDP N6A H62A sing N N 330 NDP N1A C2A sing Y N 331 NDP C2A N3A doub Y N 332 NDP C2A H2A sing N N 333 NDP N3A C4A sing Y N 334 NDP O3 PN sing N N 335 NDP PN O1N doub N N 336 NDP PN O2N sing N N 337 NDP PN O5D sing N N 338 NDP O2N H21N sing N N 339 NDP O5D C5D sing N N 340 NDP C5D C4D sing N N 341 NDP C5D H51N sing N N 342 NDP C5D H52N sing N N 343 NDP C4D O4D sing N N 344 NDP C4D C3D sing N N 345 NDP C4D H4D sing N N 346 NDP O4D C1D sing N N 347 NDP C3D O3D sing N N 348 NDP C3D C2D sing N N 349 NDP C3D H3D sing N N 350 NDP O3D HO3N sing N N 351 NDP C2D O2D sing N N 352 NDP C2D C1D sing N N 353 NDP C2D H2D sing N N 354 NDP O2D HO2N sing N N 355 NDP C1D N1N sing N N 356 NDP C1D H1D sing N N 357 NDP N1N C2N sing N N 358 NDP N1N C6N sing N N 359 NDP C2N C3N doub N N 360 NDP C2N H2N sing N N 361 NDP C3N C7N sing N N 362 NDP C3N C4N sing N N 363 NDP C7N O7N doub N N 364 NDP C7N N7N sing N N 365 NDP N7N H71N sing N N 366 NDP N7N H72N sing N N 367 NDP C4N C5N sing N N 368 NDP C4N H41N sing N N 369 NDP C4N H42N sing N N 370 NDP C5N C6N doub N N 371 NDP C5N H5N sing N N 372 NDP C6N H6N sing N N 373 NDP P2B O1X doub N N 374 NDP P2B O2X sing N N 375 NDP P2B O3X sing N N 376 NDP O2X HOP2 sing N N 377 NDP O3X HOP3 sing N N 378 PHE N CA sing N N 379 PHE N H sing N N 380 PHE N H2 sing N N 381 PHE CA C sing N N 382 PHE CA CB sing N N 383 PHE CA HA sing N N 384 PHE C O doub N N 385 PHE C OXT sing N N 386 PHE CB CG sing N N 387 PHE CB HB2 sing N N 388 PHE CB HB3 sing N N 389 PHE CG CD1 doub Y N 390 PHE CG CD2 sing Y N 391 PHE CD1 CE1 sing Y N 392 PHE CD1 HD1 sing N N 393 PHE CD2 CE2 doub Y N 394 PHE CD2 HD2 sing N N 395 PHE CE1 CZ doub Y N 396 PHE CE1 HE1 sing N N 397 PHE CE2 CZ sing Y N 398 PHE CE2 HE2 sing N N 399 PHE CZ HZ sing N N 400 PHE OXT HXT sing N N 401 PRO N CA sing N N 402 PRO N CD sing N N 403 PRO N H sing N N 404 PRO CA C sing N N 405 PRO CA CB sing N N 406 PRO CA HA sing N N 407 PRO C O doub N N 408 PRO C OXT sing N N 409 PRO CB CG sing N N 410 PRO CB HB2 sing N N 411 PRO CB HB3 sing N N 412 PRO CG CD sing N N 413 PRO CG HG2 sing N N 414 PRO CG HG3 sing N N 415 PRO CD HD2 sing N N 416 PRO CD HD3 sing N N 417 PRO OXT HXT sing N N 418 SER N CA sing N N 419 SER N H sing N N 420 SER N H2 sing N N 421 SER CA C sing N N 422 SER CA CB sing N N 423 SER CA HA sing N N 424 SER C O doub N N 425 SER C OXT sing N N 426 SER CB OG sing N N 427 SER CB HB2 sing N N 428 SER CB HB3 sing N N 429 SER OG HG sing N N 430 SER OXT HXT sing N N 431 THR N CA sing N N 432 THR N H sing N N 433 THR N H2 sing N N 434 THR CA C sing N N 435 THR CA CB sing N N 436 THR CA HA sing N N 437 THR C O doub N N 438 THR C OXT sing N N 439 THR CB OG1 sing N N 440 THR CB CG2 sing N N 441 THR CB HB sing N N 442 THR OG1 HG1 sing N N 443 THR CG2 HG21 sing N N 444 THR CG2 HG22 sing N N 445 THR CG2 HG23 sing N N 446 THR OXT HXT sing N N 447 TRP N CA sing N N 448 TRP N H sing N N 449 TRP N H2 sing N N 450 TRP CA C sing N N 451 TRP CA CB sing N N 452 TRP CA HA sing N N 453 TRP C O doub N N 454 TRP C OXT sing N N 455 TRP CB CG sing N N 456 TRP CB HB2 sing N N 457 TRP CB HB3 sing N N 458 TRP CG CD1 doub Y N 459 TRP CG CD2 sing Y N 460 TRP CD1 NE1 sing Y N 461 TRP CD1 HD1 sing N N 462 TRP CD2 CE2 doub Y N 463 TRP CD2 CE3 sing Y N 464 TRP NE1 CE2 sing Y N 465 TRP NE1 HE1 sing N N 466 TRP CE2 CZ2 sing Y N 467 TRP CE3 CZ3 doub Y N 468 TRP CE3 HE3 sing N N 469 TRP CZ2 CH2 doub Y N 470 TRP CZ2 HZ2 sing N N 471 TRP CZ3 CH2 sing Y N 472 TRP CZ3 HZ3 sing N N 473 TRP CH2 HH2 sing N N 474 TRP OXT HXT sing N N 475 TYR N CA sing N N 476 TYR N H sing N N 477 TYR N H2 sing N N 478 TYR CA C sing N N 479 TYR CA CB sing N N 480 TYR CA HA sing N N 481 TYR C O doub N N 482 TYR C OXT sing N N 483 TYR CB CG sing N N 484 TYR CB HB2 sing N N 485 TYR CB HB3 sing N N 486 TYR CG CD1 doub Y N 487 TYR CG CD2 sing Y N 488 TYR CD1 CE1 sing Y N 489 TYR CD1 HD1 sing N N 490 TYR CD2 CE2 doub Y N 491 TYR CD2 HD2 sing N N 492 TYR CE1 CZ doub Y N 493 TYR CE1 HE1 sing N N 494 TYR CE2 CZ sing Y N 495 TYR CE2 HE2 sing N N 496 TYR CZ OH sing N N 497 TYR OH HH sing N N 498 TYR OXT HXT sing N N 499 VAL N CA sing N N 500 VAL N H sing N N 501 VAL N H2 sing N N 502 VAL CA C sing N N 503 VAL CA CB sing N N 504 VAL CA HA sing N N 505 VAL C O doub N N 506 VAL C OXT sing N N 507 VAL CB CG1 sing N N 508 VAL CB CG2 sing N N 509 VAL CB HB sing N N 510 VAL CG1 HG11 sing N N 511 VAL CG1 HG12 sing N N 512 VAL CG1 HG13 sing N N 513 VAL CG2 HG21 sing N N 514 VAL CG2 HG22 sing N N 515 VAL CG2 HG23 sing N N 516 VAL OXT HXT sing N N 517 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '6-{3-[(2,4-diamino-5-methylpyrido[2,3-d]pyrimidin-6-yl)methyl]-4-methoxyphenoxy}hexanoic acid' D2J 3 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' NDP 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3CD2 _pdbx_initial_refinement_model.details 'PDB entry 3cd2' #