data_3O5L # _entry.id 3O5L # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3O5L pdb_00003o5l 10.2210/pdb3o5l/pdb RCSB RCSB060693 ? ? WWPDB D_1000060693 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3O5D . unspecified PDB 3O5E . unspecified PDB 3O5F . unspecified PDB 3O5G . unspecified PDB 3O5I . unspecified PDB 3O5J . unspecified PDB 3O5K . unspecified PDB 3O5M . unspecified PDB 3O5O . unspecified PDB 3O5P . unspecified PDB 3O5Q . unspecified PDB 3O5R . unspecified PDB 1KT0 'structure of full-length FKBP51' unspecified # _pdbx_database_status.entry_id 3O5L _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-07-28 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bracher, A.' 1 'Kozany, C.' 2 'Thost, A.-K.' 3 'Hausch, F.' 4 # _citation.id primary _citation.title 'Structural characterization of the PPIase domain of FKBP51, a cochaperone of human Hsp90.' _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 67 _citation.page_first 549 _citation.page_last 559 _citation.year 2011 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21636895 _citation.pdbx_database_id_DOI 10.1107/S0907444911013862 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bracher, A.' 1 ? primary 'Kozany, C.' 2 ? primary 'Thost, A.K.' 3 ? primary 'Hausch, F.' 4 ? # _cell.length_a 47.978 _cell.length_b 47.978 _cell.length_c 88.998 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 3O5L _cell.pdbx_unique_axis ? _cell.Z_PDB 6 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.entry_id 3O5L _symmetry.Int_Tables_number 154 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Peptidyl-prolyl cis-trans isomerase FKBP5' 14026.077 1 5.2.1.8 A19T ? ? 2 non-polymer syn 'PENTAETHYLENE GLYCOL' 238.278 1 ? ? ? ? 3 water nat water 18.015 161 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;PPIase FKBP5, FK506-binding protein 5, FKBP-5, Rotamase, 51 kDa FK506-binding protein, 51 kDa FKBP, FKBP-51, 54 kDa progesterone receptor-associated immunophilin, FKBP54, p54, FF1 antigen, HSP90-binding immunophilin, Androgen-regulated protein 6 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GAPATVTEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDI GVATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFKGE ; _entity_poly.pdbx_seq_one_letter_code_can ;GAPATVTEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDI GVATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFKGE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 PRO n 1 4 ALA n 1 5 THR n 1 6 VAL n 1 7 THR n 1 8 GLU n 1 9 GLN n 1 10 GLY n 1 11 GLU n 1 12 ASP n 1 13 ILE n 1 14 THR n 1 15 SER n 1 16 LYS n 1 17 LYS n 1 18 ASP n 1 19 ARG n 1 20 GLY n 1 21 VAL n 1 22 LEU n 1 23 LYS n 1 24 ILE n 1 25 VAL n 1 26 LYS n 1 27 ARG n 1 28 VAL n 1 29 GLY n 1 30 ASN n 1 31 GLY n 1 32 GLU n 1 33 GLU n 1 34 THR n 1 35 PRO n 1 36 MET n 1 37 ILE n 1 38 GLY n 1 39 ASP n 1 40 LYS n 1 41 VAL n 1 42 TYR n 1 43 VAL n 1 44 HIS n 1 45 TYR n 1 46 LYS n 1 47 GLY n 1 48 LYS n 1 49 LEU n 1 50 SER n 1 51 ASN n 1 52 GLY n 1 53 LYS n 1 54 LYS n 1 55 PHE n 1 56 ASP n 1 57 SER n 1 58 SER n 1 59 HIS n 1 60 ASP n 1 61 ARG n 1 62 ASN n 1 63 GLU n 1 64 PRO n 1 65 PHE n 1 66 VAL n 1 67 PHE n 1 68 SER n 1 69 LEU n 1 70 GLY n 1 71 LYS n 1 72 GLY n 1 73 GLN n 1 74 VAL n 1 75 ILE n 1 76 LYS n 1 77 ALA n 1 78 TRP n 1 79 ASP n 1 80 ILE n 1 81 GLY n 1 82 VAL n 1 83 ALA n 1 84 THR n 1 85 MET n 1 86 LYS n 1 87 LYS n 1 88 GLY n 1 89 GLU n 1 90 ILE n 1 91 CYS n 1 92 HIS n 1 93 LEU n 1 94 LEU n 1 95 CYS n 1 96 LYS n 1 97 PRO n 1 98 GLU n 1 99 TYR n 1 100 ALA n 1 101 TYR n 1 102 GLY n 1 103 SER n 1 104 ALA n 1 105 GLY n 1 106 SER n 1 107 LEU n 1 108 PRO n 1 109 LYS n 1 110 ILE n 1 111 PRO n 1 112 SER n 1 113 ASN n 1 114 ALA n 1 115 THR n 1 116 LEU n 1 117 PHE n 1 118 PHE n 1 119 GLU n 1 120 ILE n 1 121 GLU n 1 122 LEU n 1 123 LEU n 1 124 ASP n 1 125 PHE n 1 126 LYS n 1 127 GLY n 1 128 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'AIG6, FKBP5, FKBP51' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) codon+ RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pProEx-HtB _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FKBP5_HUMAN _struct_ref.pdbx_db_accession Q13451 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ATVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVA TMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFKGE ; _struct_ref.pdbx_align_begin 16 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3O5L _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 128 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q13451 _struct_ref_seq.db_align_beg 16 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 140 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 16 _struct_ref_seq.pdbx_auth_seq_align_end 140 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3O5L GLY A 1 ? UNP Q13451 ? ? 'expression tag' 13 1 1 3O5L ALA A 2 ? UNP Q13451 ? ? 'expression tag' 14 2 1 3O5L PRO A 3 ? UNP Q13451 ? ? 'expression tag' 15 3 1 3O5L THR A 7 ? UNP Q13451 ALA 19 'SEE REMARK 999' 19 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 1PE non-polymer . 'PENTAETHYLENE GLYCOL' PEG400 'C10 H22 O6' 238.278 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3O5L _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.11 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 41.66 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details '30 % Jeffamine ED-2001, 0.1 M HEPES, pH 7.0, vapor diffusion, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2006-12-18 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9723 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X10SA' _diffrn_source.pdbx_wavelength_list 0.9723 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X10SA # _reflns.entry_id 3O5L _reflns.d_resolution_high 1.300 _reflns.d_resolution_low 41.559 _reflns.number_obs 29538 _reflns.pdbx_Rmerge_I_obs 0.063 _reflns.pdbx_netI_over_sigmaI 13.100 _reflns.pdbx_Rsym_value 0.063 _reflns.pdbx_redundancy 4.100 _reflns.percent_possible_obs 99.100 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.B_iso_Wilson_estimate 14.32 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.300 1.370 ? 16038 ? 0.399 1.8 0.399 ? 3.800 ? 4215 98.200 1 1 1.370 1.450 ? 15265 ? 0.273 2.5 0.273 ? 3.800 ? 4019 98.800 2 1 1.450 1.550 ? 14781 ? 0.186 3.5 0.186 ? 3.900 ? 3804 99.700 3 1 1.550 1.680 ? 14411 ? 0.146 4.4 0.146 ? 4.000 ? 3574 99.900 4 1 1.680 1.840 ? 14103 ? 0.109 5.6 0.109 ? 4.200 ? 3323 100.000 5 1 1.840 2.060 ? 13105 ? 0.078 7.8 0.078 ? 4.400 ? 2986 100.000 6 1 2.060 2.370 ? 11858 ? 0.063 9.4 0.063 ? 4.400 ? 2670 99.800 7 1 2.370 2.910 ? 9981 ? 0.057 10.2 0.057 ? 4.400 ? 2259 99.600 8 1 2.910 4.110 ? 7677 ? 0.048 11.6 0.048 ? 4.300 ? 1766 98.900 9 1 4.110 30.373 ? 3651 ? 0.041 13.5 0.041 ? 4.000 ? 922 89.000 10 1 # _refine.entry_id 3O5L _refine.ls_d_res_high 1.3000 _refine.ls_d_res_low 20.0000 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.8100 _refine.ls_number_reflns_obs 29516 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1735 _refine.ls_R_factor_R_work 0.1718 _refine.ls_wR_factor_R_work 0.1845 _refine.ls_R_factor_R_free 0.2062 _refine.ls_wR_factor_R_free 0.2293 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_number_reflns_R_free 1487 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 17.7403 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.0100 _refine.aniso_B[2][2] 0.0100 _refine.aniso_B[3][3] -0.0200 _refine.aniso_B[1][2] 0.0100 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9670 _refine.correlation_coeff_Fo_to_Fc_free 0.9580 _refine.overall_SU_R_Cruickshank_DPI 0.0619 _refine.overall_SU_R_free 0.0576 _refine.pdbx_overall_ESU_R_Free 0.0580 _refine.overall_SU_ML 0.0380 _refine.overall_SU_B 1.9170 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB entry 3O5P' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8826 _refine.B_iso_max 54.880 _refine.B_iso_min 5.470 _refine.occupancy_max 1.000 _refine.occupancy_min 0.300 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 982 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 16 _refine_hist.number_atoms_solvent 161 _refine_hist.number_atoms_total 1159 _refine_hist.d_res_high 1.3000 _refine_hist.d_res_low 20.0000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1100 0.015 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 788 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1480 1.554 1.982 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 1941 0.885 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 143 7.970 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 43 28.539 24.651 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 204 13.730 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 4 9.673 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 154 0.092 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1235 0.007 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 212 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 249 0.281 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 908 0.204 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 569 0.181 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 620 0.087 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 131 0.221 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 15 0.268 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 33 0.269 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 29 0.282 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 731 1.745 1.500 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 283 0.912 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1102 2.264 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 455 3.006 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 378 3.993 4.500 ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 2101 1.473 3.000 ? 'X-RAY DIFFRACTION' ? r_sphericity_free 168 8.811 3.000 ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded 1861 5.452 3.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.3000 _refine_ls_shell.d_res_low 1.3340 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 98.2400 _refine_ls_shell.number_reflns_R_work 2028 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2280 _refine_ls_shell.R_factor_R_free 0.2910 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 95 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2123 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3O5L _struct.title 'Fk1 domain mutant A19T of FKBP51, crystal form I' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3O5L _struct_keywords.text 'Fk-506 binding domain, Hsp90 cochaperone, immunophiline, peptidyl-prolyl isomerase, ISOMERASE' _struct_keywords.pdbx_keywords ISOMERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 1 ? GLY A 10 ? GLY A 13 GLY A 22 1 ? 10 HELX_P HELX_P2 2 HIS A 59 ? ARG A 61 ? HIS A 71 ARG A 73 5 ? 3 HELX_P HELX_P3 3 ILE A 75 ? ALA A 83 ? ILE A 87 ALA A 95 1 ? 9 HELX_P HELX_P4 4 PRO A 97 ? ALA A 100 ? PRO A 109 ALA A 112 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LEU _struct_mon_prot_cis.label_seq_id 107 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LEU _struct_mon_prot_cis.auth_seq_id 119 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 108 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 120 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 4.76 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 11 ? ASP A 12 ? GLU A 23 ASP A 24 A 2 VAL A 21 ? ARG A 27 ? VAL A 33 ARG A 39 A 3 ILE A 90 ? CYS A 95 ? ILE A 102 CYS A 107 A 4 LEU A 116 ? LYS A 126 ? LEU A 128 LYS A 138 A 5 LYS A 40 ? LEU A 49 ? LYS A 52 LEU A 61 A 6 LYS A 54 ? SER A 57 ? LYS A 66 SER A 69 B 1 GLU A 11 ? ASP A 12 ? GLU A 23 ASP A 24 B 2 VAL A 21 ? ARG A 27 ? VAL A 33 ARG A 39 B 3 ILE A 90 ? CYS A 95 ? ILE A 102 CYS A 107 B 4 LEU A 116 ? LYS A 126 ? LEU A 128 LYS A 138 B 5 LYS A 40 ? LEU A 49 ? LYS A 52 LEU A 61 B 6 PHE A 65 ? SER A 68 ? PHE A 77 SER A 80 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 11 ? N GLU A 23 O LYS A 23 ? O LYS A 35 A 2 3 N LYS A 26 ? N LYS A 38 O ILE A 90 ? O ILE A 102 A 3 4 N CYS A 95 ? N CYS A 107 O LEU A 116 ? O LEU A 128 A 4 5 O PHE A 117 ? O PHE A 129 N LYS A 48 ? N LYS A 60 A 5 6 N GLY A 47 ? N GLY A 59 O PHE A 55 ? O PHE A 67 B 1 2 N GLU A 11 ? N GLU A 23 O LYS A 23 ? O LYS A 35 B 2 3 N LYS A 26 ? N LYS A 38 O ILE A 90 ? O ILE A 102 B 3 4 N CYS A 95 ? N CYS A 107 O LEU A 116 ? O LEU A 128 B 4 5 O PHE A 117 ? O PHE A 129 N LYS A 48 ? N LYS A 60 B 5 6 N VAL A 41 ? N VAL A 53 O PHE A 67 ? O PHE A 79 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id 1PE _struct_site.pdbx_auth_seq_id 1 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 9 _struct_site.details 'BINDING SITE FOR RESIDUE 1PE A 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 TYR A 45 ? TYR A 57 . ? 1_555 ? 2 AC1 9 PHE A 55 ? PHE A 67 . ? 1_555 ? 3 AC1 9 ASP A 56 ? ASP A 68 . ? 1_555 ? 4 AC1 9 VAL A 74 ? VAL A 86 . ? 1_555 ? 5 AC1 9 ILE A 75 ? ILE A 87 . ? 1_555 ? 6 AC1 9 TRP A 78 ? TRP A 90 . ? 1_555 ? 7 AC1 9 TYR A 101 ? TYR A 113 . ? 1_555 ? 8 AC1 9 HOH C . ? HOH A 229 . ? 1_555 ? 9 AC1 9 HOH C . ? HOH A 262 . ? 1_555 ? # _atom_sites.entry_id 3O5L _atom_sites.fract_transf_matrix[1][1] 0.020843 _atom_sites.fract_transf_matrix[1][2] 0.012034 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024067 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011236 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 13 13 GLY GLY A . n A 1 2 ALA 2 14 14 ALA ALA A . n A 1 3 PRO 3 15 15 PRO PRO A . n A 1 4 ALA 4 16 16 ALA ALA A . n A 1 5 THR 5 17 17 THR THR A . n A 1 6 VAL 6 18 18 VAL VAL A . n A 1 7 THR 7 19 19 THR THR A . n A 1 8 GLU 8 20 20 GLU GLU A . n A 1 9 GLN 9 21 21 GLN GLN A . n A 1 10 GLY 10 22 22 GLY GLY A . n A 1 11 GLU 11 23 23 GLU GLU A . n A 1 12 ASP 12 24 24 ASP ASP A . n A 1 13 ILE 13 25 25 ILE ILE A . n A 1 14 THR 14 26 26 THR THR A . n A 1 15 SER 15 27 27 SER SER A . n A 1 16 LYS 16 28 28 LYS LYS A . n A 1 17 LYS 17 29 29 LYS LYS A . n A 1 18 ASP 18 30 30 ASP ASP A . n A 1 19 ARG 19 31 31 ARG ARG A . n A 1 20 GLY 20 32 32 GLY GLY A . n A 1 21 VAL 21 33 33 VAL VAL A . n A 1 22 LEU 22 34 34 LEU LEU A . n A 1 23 LYS 23 35 35 LYS LYS A . n A 1 24 ILE 24 36 36 ILE ILE A . n A 1 25 VAL 25 37 37 VAL VAL A . n A 1 26 LYS 26 38 38 LYS LYS A . n A 1 27 ARG 27 39 39 ARG ARG A . n A 1 28 VAL 28 40 40 VAL VAL A . n A 1 29 GLY 29 41 41 GLY GLY A . n A 1 30 ASN 30 42 42 ASN ASN A . n A 1 31 GLY 31 43 43 GLY GLY A . n A 1 32 GLU 32 44 44 GLU GLU A . n A 1 33 GLU 33 45 45 GLU GLU A . n A 1 34 THR 34 46 46 THR THR A . n A 1 35 PRO 35 47 47 PRO PRO A . n A 1 36 MET 36 48 48 MET MET A . n A 1 37 ILE 37 49 49 ILE ILE A . n A 1 38 GLY 38 50 50 GLY GLY A . n A 1 39 ASP 39 51 51 ASP ASP A . n A 1 40 LYS 40 52 52 LYS LYS A . n A 1 41 VAL 41 53 53 VAL VAL A . n A 1 42 TYR 42 54 54 TYR TYR A . n A 1 43 VAL 43 55 55 VAL VAL A . n A 1 44 HIS 44 56 56 HIS HIS A . n A 1 45 TYR 45 57 57 TYR TYR A . n A 1 46 LYS 46 58 58 LYS LYS A . n A 1 47 GLY 47 59 59 GLY GLY A . n A 1 48 LYS 48 60 60 LYS LYS A . n A 1 49 LEU 49 61 61 LEU LEU A . n A 1 50 SER 50 62 62 SER SER A . n A 1 51 ASN 51 63 63 ASN ASN A . n A 1 52 GLY 52 64 64 GLY GLY A . n A 1 53 LYS 53 65 65 LYS LYS A . n A 1 54 LYS 54 66 66 LYS LYS A . n A 1 55 PHE 55 67 67 PHE PHE A . n A 1 56 ASP 56 68 68 ASP ASP A . n A 1 57 SER 57 69 69 SER SER A . n A 1 58 SER 58 70 70 SER SER A . n A 1 59 HIS 59 71 71 HIS HIS A . n A 1 60 ASP 60 72 72 ASP ASP A . n A 1 61 ARG 61 73 73 ARG ARG A . n A 1 62 ASN 62 74 74 ASN ASN A . n A 1 63 GLU 63 75 75 GLU GLU A . n A 1 64 PRO 64 76 76 PRO PRO A . n A 1 65 PHE 65 77 77 PHE PHE A . n A 1 66 VAL 66 78 78 VAL VAL A . n A 1 67 PHE 67 79 79 PHE PHE A . n A 1 68 SER 68 80 80 SER SER A . n A 1 69 LEU 69 81 81 LEU LEU A . n A 1 70 GLY 70 82 82 GLY GLY A . n A 1 71 LYS 71 83 83 LYS LYS A . n A 1 72 GLY 72 84 84 GLY GLY A . n A 1 73 GLN 73 85 85 GLN GLN A . n A 1 74 VAL 74 86 86 VAL VAL A . n A 1 75 ILE 75 87 87 ILE ILE A . n A 1 76 LYS 76 88 88 LYS LYS A . n A 1 77 ALA 77 89 89 ALA ALA A . n A 1 78 TRP 78 90 90 TRP TRP A . n A 1 79 ASP 79 91 91 ASP ASP A . n A 1 80 ILE 80 92 92 ILE ILE A . n A 1 81 GLY 81 93 93 GLY GLY A . n A 1 82 VAL 82 94 94 VAL VAL A . n A 1 83 ALA 83 95 95 ALA ALA A . n A 1 84 THR 84 96 96 THR THR A . n A 1 85 MET 85 97 97 MET MET A . n A 1 86 LYS 86 98 98 LYS LYS A . n A 1 87 LYS 87 99 99 LYS LYS A . n A 1 88 GLY 88 100 100 GLY GLY A . n A 1 89 GLU 89 101 101 GLU GLU A . n A 1 90 ILE 90 102 102 ILE ILE A . n A 1 91 CYS 91 103 103 CYS CYS A . n A 1 92 HIS 92 104 104 HIS HIS A . n A 1 93 LEU 93 105 105 LEU LEU A . n A 1 94 LEU 94 106 106 LEU LEU A . n A 1 95 CYS 95 107 107 CYS CYS A . n A 1 96 LYS 96 108 108 LYS LYS A . n A 1 97 PRO 97 109 109 PRO PRO A . n A 1 98 GLU 98 110 110 GLU GLU A . n A 1 99 TYR 99 111 111 TYR TYR A . n A 1 100 ALA 100 112 112 ALA ALA A . n A 1 101 TYR 101 113 113 TYR TYR A . n A 1 102 GLY 102 114 114 GLY GLY A . n A 1 103 SER 103 115 115 SER SER A . n A 1 104 ALA 104 116 116 ALA ALA A . n A 1 105 GLY 105 117 117 GLY GLY A . n A 1 106 SER 106 118 118 SER SER A . n A 1 107 LEU 107 119 119 LEU LEU A . n A 1 108 PRO 108 120 120 PRO PRO A . n A 1 109 LYS 109 121 121 LYS LYS A . n A 1 110 ILE 110 122 122 ILE ILE A . n A 1 111 PRO 111 123 123 PRO PRO A . n A 1 112 SER 112 124 124 SER SER A . n A 1 113 ASN 113 125 125 ASN ASN A . n A 1 114 ALA 114 126 126 ALA ALA A . n A 1 115 THR 115 127 127 THR THR A . n A 1 116 LEU 116 128 128 LEU LEU A . n A 1 117 PHE 117 129 129 PHE PHE A . n A 1 118 PHE 118 130 130 PHE PHE A . n A 1 119 GLU 119 131 131 GLU GLU A . n A 1 120 ILE 120 132 132 ILE ILE A . n A 1 121 GLU 121 133 133 GLU GLU A . n A 1 122 LEU 122 134 134 LEU LEU A . n A 1 123 LEU 123 135 135 LEU LEU A . n A 1 124 ASP 124 136 136 ASP ASP A . n A 1 125 PHE 125 137 137 PHE PHE A . n A 1 126 LYS 126 138 138 LYS LYS A . n A 1 127 GLY 127 139 139 GLY GLY A . n A 1 128 GLU 128 140 140 GLU GLU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1PE 1 1 1 1PE 1PE A . C 3 HOH 1 2 2 HOH HOH A . C 3 HOH 2 3 3 HOH HOH A . C 3 HOH 3 4 4 HOH HOH A . C 3 HOH 4 5 5 HOH HOH A . C 3 HOH 5 6 6 HOH HOH A . C 3 HOH 6 7 7 HOH HOH A . C 3 HOH 7 8 8 HOH HOH A . C 3 HOH 8 10 10 HOH HOH A . C 3 HOH 9 11 11 HOH HOH A . C 3 HOH 10 12 12 HOH HOH A . C 3 HOH 11 141 141 HOH HOH A . C 3 HOH 12 142 142 HOH HOH A . C 3 HOH 13 143 143 HOH HOH A . C 3 HOH 14 144 144 HOH HOH A . C 3 HOH 15 145 145 HOH HOH A . C 3 HOH 16 146 146 HOH HOH A . C 3 HOH 17 147 147 HOH HOH A . C 3 HOH 18 148 148 HOH HOH A . C 3 HOH 19 149 149 HOH HOH A . C 3 HOH 20 150 150 HOH HOH A . C 3 HOH 21 151 151 HOH HOH A . C 3 HOH 22 152 152 HOH HOH A . C 3 HOH 23 153 153 HOH HOH A . C 3 HOH 24 154 154 HOH HOH A . C 3 HOH 25 155 155 HOH HOH A . C 3 HOH 26 156 156 HOH HOH A . C 3 HOH 27 157 157 HOH HOH A . C 3 HOH 28 158 158 HOH HOH A . C 3 HOH 29 159 159 HOH HOH A . C 3 HOH 30 160 160 HOH HOH A . C 3 HOH 31 161 161 HOH HOH A . C 3 HOH 32 162 162 HOH HOH A . C 3 HOH 33 163 163 HOH HOH A . C 3 HOH 34 164 164 HOH HOH A . C 3 HOH 35 165 165 HOH HOH A . C 3 HOH 36 166 166 HOH HOH A . C 3 HOH 37 167 167 HOH HOH A . C 3 HOH 38 168 168 HOH HOH A . C 3 HOH 39 169 169 HOH HOH A . C 3 HOH 40 170 170 HOH HOH A . C 3 HOH 41 171 171 HOH HOH A . C 3 HOH 42 172 172 HOH HOH A . C 3 HOH 43 173 173 HOH HOH A . C 3 HOH 44 174 13 HOH HOH A . C 3 HOH 45 175 14 HOH HOH A . C 3 HOH 46 176 15 HOH HOH A . C 3 HOH 47 177 16 HOH HOH A . C 3 HOH 48 178 17 HOH HOH A . C 3 HOH 49 179 18 HOH HOH A . C 3 HOH 50 180 19 HOH HOH A . C 3 HOH 51 181 20 HOH HOH A . C 3 HOH 52 182 22 HOH HOH A . C 3 HOH 53 183 23 HOH HOH A . C 3 HOH 54 184 24 HOH HOH A . C 3 HOH 55 185 25 HOH HOH A . C 3 HOH 56 186 26 HOH HOH A . C 3 HOH 57 187 27 HOH HOH A . C 3 HOH 58 188 28 HOH HOH A . C 3 HOH 59 189 29 HOH HOH A . C 3 HOH 60 190 30 HOH HOH A . C 3 HOH 61 191 31 HOH HOH A . C 3 HOH 62 192 32 HOH HOH A . C 3 HOH 63 193 33 HOH HOH A . C 3 HOH 64 194 34 HOH HOH A . C 3 HOH 65 195 35 HOH HOH A . C 3 HOH 66 196 36 HOH HOH A . C 3 HOH 67 197 37 HOH HOH A . C 3 HOH 68 198 38 HOH HOH A . C 3 HOH 69 199 39 HOH HOH A . C 3 HOH 70 200 40 HOH HOH A . C 3 HOH 71 201 41 HOH HOH A . C 3 HOH 72 202 42 HOH HOH A . C 3 HOH 73 203 43 HOH HOH A . C 3 HOH 74 204 44 HOH HOH A . C 3 HOH 75 205 45 HOH HOH A . C 3 HOH 76 206 46 HOH HOH A . C 3 HOH 77 207 47 HOH HOH A . C 3 HOH 78 208 48 HOH HOH A . C 3 HOH 79 209 49 HOH HOH A . C 3 HOH 80 210 50 HOH HOH A . C 3 HOH 81 211 51 HOH HOH A . C 3 HOH 82 212 52 HOH HOH A . C 3 HOH 83 213 53 HOH HOH A . C 3 HOH 84 214 54 HOH HOH A . C 3 HOH 85 215 55 HOH HOH A . C 3 HOH 86 216 56 HOH HOH A . C 3 HOH 87 217 57 HOH HOH A . C 3 HOH 88 218 58 HOH HOH A . C 3 HOH 89 219 59 HOH HOH A . C 3 HOH 90 220 60 HOH HOH A . C 3 HOH 91 221 62 HOH HOH A . C 3 HOH 92 222 64 HOH HOH A . C 3 HOH 93 223 65 HOH HOH A . C 3 HOH 94 224 66 HOH HOH A . C 3 HOH 95 225 67 HOH HOH A . C 3 HOH 96 226 68 HOH HOH A . C 3 HOH 97 227 69 HOH HOH A . C 3 HOH 98 228 70 HOH HOH A . C 3 HOH 99 229 71 HOH HOH A . C 3 HOH 100 230 72 HOH HOH A . C 3 HOH 101 231 73 HOH HOH A . C 3 HOH 102 232 74 HOH HOH A . C 3 HOH 103 233 75 HOH HOH A . C 3 HOH 104 234 76 HOH HOH A . C 3 HOH 105 235 77 HOH HOH A . C 3 HOH 106 236 78 HOH HOH A . C 3 HOH 107 237 79 HOH HOH A . C 3 HOH 108 238 80 HOH HOH A . C 3 HOH 109 239 81 HOH HOH A . C 3 HOH 110 240 82 HOH HOH A . C 3 HOH 111 241 83 HOH HOH A . C 3 HOH 112 242 84 HOH HOH A . C 3 HOH 113 243 85 HOH HOH A . C 3 HOH 114 244 86 HOH HOH A . C 3 HOH 115 245 87 HOH HOH A . C 3 HOH 116 246 88 HOH HOH A . C 3 HOH 117 247 89 HOH HOH A . C 3 HOH 118 248 90 HOH HOH A . C 3 HOH 119 249 91 HOH HOH A . C 3 HOH 120 250 92 HOH HOH A . C 3 HOH 121 251 93 HOH HOH A . C 3 HOH 122 252 96 HOH HOH A . C 3 HOH 123 253 97 HOH HOH A . C 3 HOH 124 254 98 HOH HOH A . C 3 HOH 125 255 100 HOH HOH A . C 3 HOH 126 256 101 HOH HOH A . C 3 HOH 127 257 102 HOH HOH A . C 3 HOH 128 258 103 HOH HOH A . C 3 HOH 129 259 104 HOH HOH A . C 3 HOH 130 260 105 HOH HOH A . C 3 HOH 131 261 106 HOH HOH A . C 3 HOH 132 262 107 HOH HOH A . C 3 HOH 133 263 108 HOH HOH A . C 3 HOH 134 264 109 HOH HOH A . C 3 HOH 135 265 110 HOH HOH A . C 3 HOH 136 266 112 HOH HOH A . C 3 HOH 137 267 114 HOH HOH A . C 3 HOH 138 268 115 HOH HOH A . C 3 HOH 139 269 116 HOH HOH A . C 3 HOH 140 270 117 HOH HOH A . C 3 HOH 141 271 118 HOH HOH A . C 3 HOH 142 272 119 HOH HOH A . C 3 HOH 143 273 121 HOH HOH A . C 3 HOH 144 274 122 HOH HOH A . C 3 HOH 145 275 123 HOH HOH A . C 3 HOH 146 276 124 HOH HOH A . C 3 HOH 147 277 125 HOH HOH A . C 3 HOH 148 278 126 HOH HOH A . C 3 HOH 149 279 127 HOH HOH A . C 3 HOH 150 280 128 HOH HOH A . C 3 HOH 151 281 129 HOH HOH A . C 3 HOH 152 282 130 HOH HOH A . C 3 HOH 153 283 131 HOH HOH A . C 3 HOH 154 284 132 HOH HOH A . C 3 HOH 155 285 133 HOH HOH A . C 3 HOH 156 286 134 HOH HOH A . C 3 HOH 157 287 135 HOH HOH A . C 3 HOH 158 288 136 HOH HOH A . C 3 HOH 159 289 137 HOH HOH A . C 3 HOH 160 290 138 HOH HOH A . C 3 HOH 161 291 140 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-06-01 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-03-28 4 'Structure model' 1 3 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_ref_seq_dif 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_phasing_MR.entry_id 3O5L _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor 0.407 _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc 0.590 _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 3.000 _pdbx_phasing_MR.d_res_low_rotation 30.370 _pdbx_phasing_MR.d_res_high_translation 3.000 _pdbx_phasing_MR.d_res_low_translation 30.370 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MOSFLM . ? package 'Andrew G.W. Leslie' andrew@mrc-lmb.cam.ac.uk 'data reduction' http://www.mrc-lmb.cam.ac.uk/harry/mosflm/ ? ? 2 SCALA 3.2.5 5/04/2004 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 3 MOLREP . ? program 'Alexei Vaguine' alexei@ysbl.york.ac.uk phasing http://www.ccp4.ac.uk/dist/html/molrep.html Fortran_77 ? 4 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 5 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? # _pdbx_entry_details.entry_id 3O5L _pdbx_entry_details.nonpolymer_details 'AUTHORS STATE THAT 1PE IS PROBABLY A STRUCTURED FRAGMENT OF JEFFAMINE ED-2001.' _pdbx_entry_details.sequence_details 'AUTHORS STATE THAT A19T IS A MUTATION, BUT NOT A NATURALLY OCCURRING ALLELE.' _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NZ A LYS 58 ? B O A HOH 171 ? ? 1.76 2 1 O A HOH 223 ? ? O A HOH 244 ? ? 1.95 3 1 O A HOH 238 ? ? O A HOH 244 ? ? 2.04 4 1 O A HOH 247 ? ? O A HOH 256 ? ? 2.06 5 1 NZ A LYS 60 ? B O A HOH 171 ? ? 2.09 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 NZ A LYS 58 ? B 1_555 O A HOH 241 ? ? 4_455 1.89 2 1 OE1 A GLU 44 ? B 1_555 O A HOH 152 ? ? 4_565 2.04 3 1 O A HOH 254 ? ? 1_555 O A HOH 264 ? ? 6_454 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 112 ? ? -137.60 -114.45 2 1 SER A 118 ? ? -151.74 78.15 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 45 ? CG ? A GLU 33 CG 2 1 Y 1 A GLU 45 ? CD ? A GLU 33 CD 3 1 Y 1 A GLU 45 ? OE1 ? A GLU 33 OE1 4 1 Y 1 A GLU 45 ? OE2 ? A GLU 33 OE2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 1PE OH2 O N N 1 1PE C12 C N N 2 1PE C22 C N N 3 1PE OH3 O N N 4 1PE C13 C N N 5 1PE C23 C N N 6 1PE OH4 O N N 7 1PE C14 C N N 8 1PE C24 C N N 9 1PE OH5 O N N 10 1PE C15 C N N 11 1PE C25 C N N 12 1PE OH6 O N N 13 1PE C16 C N N 14 1PE C26 C N N 15 1PE OH7 O N N 16 1PE HO2 H N N 17 1PE H121 H N N 18 1PE H122 H N N 19 1PE H221 H N N 20 1PE H222 H N N 21 1PE H131 H N N 22 1PE H132 H N N 23 1PE H231 H N N 24 1PE H232 H N N 25 1PE H141 H N N 26 1PE H142 H N N 27 1PE H241 H N N 28 1PE H242 H N N 29 1PE H151 H N N 30 1PE H152 H N N 31 1PE H251 H N N 32 1PE H252 H N N 33 1PE H161 H N N 34 1PE H162 H N N 35 1PE H261 H N N 36 1PE H262 H N N 37 1PE HO7 H N N 38 ALA N N N N 39 ALA CA C N S 40 ALA C C N N 41 ALA O O N N 42 ALA CB C N N 43 ALA OXT O N N 44 ALA H H N N 45 ALA H2 H N N 46 ALA HA H N N 47 ALA HB1 H N N 48 ALA HB2 H N N 49 ALA HB3 H N N 50 ALA HXT H N N 51 ARG N N N N 52 ARG CA C N S 53 ARG C C N N 54 ARG O O N N 55 ARG CB C N N 56 ARG CG C N N 57 ARG CD C N N 58 ARG NE N N N 59 ARG CZ C N N 60 ARG NH1 N N N 61 ARG NH2 N N N 62 ARG OXT O N N 63 ARG H H N N 64 ARG H2 H N N 65 ARG HA H N N 66 ARG HB2 H N N 67 ARG HB3 H N N 68 ARG HG2 H N N 69 ARG HG3 H N N 70 ARG HD2 H N N 71 ARG HD3 H N N 72 ARG HE H N N 73 ARG HH11 H N N 74 ARG HH12 H N N 75 ARG HH21 H N N 76 ARG HH22 H N N 77 ARG HXT H N N 78 ASN N N N N 79 ASN CA C N S 80 ASN C C N N 81 ASN O O N N 82 ASN CB C N N 83 ASN CG C N N 84 ASN OD1 O N N 85 ASN ND2 N N N 86 ASN OXT O N N 87 ASN H H N N 88 ASN H2 H N N 89 ASN HA H N N 90 ASN HB2 H N N 91 ASN HB3 H N N 92 ASN HD21 H N N 93 ASN HD22 H N N 94 ASN HXT H N N 95 ASP N N N N 96 ASP CA C N S 97 ASP C C N N 98 ASP O O N N 99 ASP CB C N N 100 ASP CG C N N 101 ASP OD1 O N N 102 ASP OD2 O N N 103 ASP OXT O N N 104 ASP H H N N 105 ASP H2 H N N 106 ASP HA H N N 107 ASP HB2 H N N 108 ASP HB3 H N N 109 ASP HD2 H N N 110 ASP HXT H N N 111 CYS N N N N 112 CYS CA C N R 113 CYS C C N N 114 CYS O O N N 115 CYS CB C N N 116 CYS SG S N N 117 CYS OXT O N N 118 CYS H H N N 119 CYS H2 H N N 120 CYS HA H N N 121 CYS HB2 H N N 122 CYS HB3 H N N 123 CYS HG H N N 124 CYS HXT H N N 125 GLN N N N N 126 GLN CA C N S 127 GLN C C N N 128 GLN O O N N 129 GLN CB C N N 130 GLN CG C N N 131 GLN CD C N N 132 GLN OE1 O N N 133 GLN NE2 N N N 134 GLN OXT O N N 135 GLN H H N N 136 GLN H2 H N N 137 GLN HA H N N 138 GLN HB2 H N N 139 GLN HB3 H N N 140 GLN HG2 H N N 141 GLN HG3 H N N 142 GLN HE21 H N N 143 GLN HE22 H N N 144 GLN HXT H N N 145 GLU N N N N 146 GLU CA C N S 147 GLU C C N N 148 GLU O O N N 149 GLU CB C N N 150 GLU CG C N N 151 GLU CD C N N 152 GLU OE1 O N N 153 GLU OE2 O N N 154 GLU OXT O N N 155 GLU H H N N 156 GLU H2 H N N 157 GLU HA H N N 158 GLU HB2 H N N 159 GLU HB3 H N N 160 GLU HG2 H N N 161 GLU HG3 H N N 162 GLU HE2 H N N 163 GLU HXT H N N 164 GLY N N N N 165 GLY CA C N N 166 GLY C C N N 167 GLY O O N N 168 GLY OXT O N N 169 GLY H H N N 170 GLY H2 H N N 171 GLY HA2 H N N 172 GLY HA3 H N N 173 GLY HXT H N N 174 HIS N N N N 175 HIS CA C N S 176 HIS C C N N 177 HIS O O N N 178 HIS CB C N N 179 HIS CG C Y N 180 HIS ND1 N Y N 181 HIS CD2 C Y N 182 HIS CE1 C Y N 183 HIS NE2 N Y N 184 HIS OXT O N N 185 HIS H H N N 186 HIS H2 H N N 187 HIS HA H N N 188 HIS HB2 H N N 189 HIS HB3 H N N 190 HIS HD1 H N N 191 HIS HD2 H N N 192 HIS HE1 H N N 193 HIS HE2 H N N 194 HIS HXT H N N 195 HOH O O N N 196 HOH H1 H N N 197 HOH H2 H N N 198 ILE N N N N 199 ILE CA C N S 200 ILE C C N N 201 ILE O O N N 202 ILE CB C N S 203 ILE CG1 C N N 204 ILE CG2 C N N 205 ILE CD1 C N N 206 ILE OXT O N N 207 ILE H H N N 208 ILE H2 H N N 209 ILE HA H N N 210 ILE HB H N N 211 ILE HG12 H N N 212 ILE HG13 H N N 213 ILE HG21 H N N 214 ILE HG22 H N N 215 ILE HG23 H N N 216 ILE HD11 H N N 217 ILE HD12 H N N 218 ILE HD13 H N N 219 ILE HXT H N N 220 LEU N N N N 221 LEU CA C N S 222 LEU C C N N 223 LEU O O N N 224 LEU CB C N N 225 LEU CG C N N 226 LEU CD1 C N N 227 LEU CD2 C N N 228 LEU OXT O N N 229 LEU H H N N 230 LEU H2 H N N 231 LEU HA H N N 232 LEU HB2 H N N 233 LEU HB3 H N N 234 LEU HG H N N 235 LEU HD11 H N N 236 LEU HD12 H N N 237 LEU HD13 H N N 238 LEU HD21 H N N 239 LEU HD22 H N N 240 LEU HD23 H N N 241 LEU HXT H N N 242 LYS N N N N 243 LYS CA C N S 244 LYS C C N N 245 LYS O O N N 246 LYS CB C N N 247 LYS CG C N N 248 LYS CD C N N 249 LYS CE C N N 250 LYS NZ N N N 251 LYS OXT O N N 252 LYS H H N N 253 LYS H2 H N N 254 LYS HA H N N 255 LYS HB2 H N N 256 LYS HB3 H N N 257 LYS HG2 H N N 258 LYS HG3 H N N 259 LYS HD2 H N N 260 LYS HD3 H N N 261 LYS HE2 H N N 262 LYS HE3 H N N 263 LYS HZ1 H N N 264 LYS HZ2 H N N 265 LYS HZ3 H N N 266 LYS HXT H N N 267 MET N N N N 268 MET CA C N S 269 MET C C N N 270 MET O O N N 271 MET CB C N N 272 MET CG C N N 273 MET SD S N N 274 MET CE C N N 275 MET OXT O N N 276 MET H H N N 277 MET H2 H N N 278 MET HA H N N 279 MET HB2 H N N 280 MET HB3 H N N 281 MET HG2 H N N 282 MET HG3 H N N 283 MET HE1 H N N 284 MET HE2 H N N 285 MET HE3 H N N 286 MET HXT H N N 287 PHE N N N N 288 PHE CA C N S 289 PHE C C N N 290 PHE O O N N 291 PHE CB C N N 292 PHE CG C Y N 293 PHE CD1 C Y N 294 PHE CD2 C Y N 295 PHE CE1 C Y N 296 PHE CE2 C Y N 297 PHE CZ C Y N 298 PHE OXT O N N 299 PHE H H N N 300 PHE H2 H N N 301 PHE HA H N N 302 PHE HB2 H N N 303 PHE HB3 H N N 304 PHE HD1 H N N 305 PHE HD2 H N N 306 PHE HE1 H N N 307 PHE HE2 H N N 308 PHE HZ H N N 309 PHE HXT H N N 310 PRO N N N N 311 PRO CA C N S 312 PRO C C N N 313 PRO O O N N 314 PRO CB C N N 315 PRO CG C N N 316 PRO CD C N N 317 PRO OXT O N N 318 PRO H H N N 319 PRO HA H N N 320 PRO HB2 H N N 321 PRO HB3 H N N 322 PRO HG2 H N N 323 PRO HG3 H N N 324 PRO HD2 H N N 325 PRO HD3 H N N 326 PRO HXT H N N 327 SER N N N N 328 SER CA C N S 329 SER C C N N 330 SER O O N N 331 SER CB C N N 332 SER OG O N N 333 SER OXT O N N 334 SER H H N N 335 SER H2 H N N 336 SER HA H N N 337 SER HB2 H N N 338 SER HB3 H N N 339 SER HG H N N 340 SER HXT H N N 341 THR N N N N 342 THR CA C N S 343 THR C C N N 344 THR O O N N 345 THR CB C N R 346 THR OG1 O N N 347 THR CG2 C N N 348 THR OXT O N N 349 THR H H N N 350 THR H2 H N N 351 THR HA H N N 352 THR HB H N N 353 THR HG1 H N N 354 THR HG21 H N N 355 THR HG22 H N N 356 THR HG23 H N N 357 THR HXT H N N 358 TRP N N N N 359 TRP CA C N S 360 TRP C C N N 361 TRP O O N N 362 TRP CB C N N 363 TRP CG C Y N 364 TRP CD1 C Y N 365 TRP CD2 C Y N 366 TRP NE1 N Y N 367 TRP CE2 C Y N 368 TRP CE3 C Y N 369 TRP CZ2 C Y N 370 TRP CZ3 C Y N 371 TRP CH2 C Y N 372 TRP OXT O N N 373 TRP H H N N 374 TRP H2 H N N 375 TRP HA H N N 376 TRP HB2 H N N 377 TRP HB3 H N N 378 TRP HD1 H N N 379 TRP HE1 H N N 380 TRP HE3 H N N 381 TRP HZ2 H N N 382 TRP HZ3 H N N 383 TRP HH2 H N N 384 TRP HXT H N N 385 TYR N N N N 386 TYR CA C N S 387 TYR C C N N 388 TYR O O N N 389 TYR CB C N N 390 TYR CG C Y N 391 TYR CD1 C Y N 392 TYR CD2 C Y N 393 TYR CE1 C Y N 394 TYR CE2 C Y N 395 TYR CZ C Y N 396 TYR OH O N N 397 TYR OXT O N N 398 TYR H H N N 399 TYR H2 H N N 400 TYR HA H N N 401 TYR HB2 H N N 402 TYR HB3 H N N 403 TYR HD1 H N N 404 TYR HD2 H N N 405 TYR HE1 H N N 406 TYR HE2 H N N 407 TYR HH H N N 408 TYR HXT H N N 409 VAL N N N N 410 VAL CA C N S 411 VAL C C N N 412 VAL O O N N 413 VAL CB C N N 414 VAL CG1 C N N 415 VAL CG2 C N N 416 VAL OXT O N N 417 VAL H H N N 418 VAL H2 H N N 419 VAL HA H N N 420 VAL HB H N N 421 VAL HG11 H N N 422 VAL HG12 H N N 423 VAL HG13 H N N 424 VAL HG21 H N N 425 VAL HG22 H N N 426 VAL HG23 H N N 427 VAL HXT H N N 428 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1PE OH2 C12 sing N N 1 1PE OH2 HO2 sing N N 2 1PE C12 C22 sing N N 3 1PE C12 H121 sing N N 4 1PE C12 H122 sing N N 5 1PE C22 OH3 sing N N 6 1PE C22 H221 sing N N 7 1PE C22 H222 sing N N 8 1PE OH3 C23 sing N N 9 1PE C13 C23 sing N N 10 1PE C13 OH4 sing N N 11 1PE C13 H131 sing N N 12 1PE C13 H132 sing N N 13 1PE C23 H231 sing N N 14 1PE C23 H232 sing N N 15 1PE OH4 C24 sing N N 16 1PE C14 C24 sing N N 17 1PE C14 OH5 sing N N 18 1PE C14 H141 sing N N 19 1PE C14 H142 sing N N 20 1PE C24 H241 sing N N 21 1PE C24 H242 sing N N 22 1PE OH5 C25 sing N N 23 1PE C15 C25 sing N N 24 1PE C15 OH6 sing N N 25 1PE C15 H151 sing N N 26 1PE C15 H152 sing N N 27 1PE C25 H251 sing N N 28 1PE C25 H252 sing N N 29 1PE OH6 C26 sing N N 30 1PE C16 C26 sing N N 31 1PE C16 OH7 sing N N 32 1PE C16 H161 sing N N 33 1PE C16 H162 sing N N 34 1PE C26 H261 sing N N 35 1PE C26 H262 sing N N 36 1PE OH7 HO7 sing N N 37 ALA N CA sing N N 38 ALA N H sing N N 39 ALA N H2 sing N N 40 ALA CA C sing N N 41 ALA CA CB sing N N 42 ALA CA HA sing N N 43 ALA C O doub N N 44 ALA C OXT sing N N 45 ALA CB HB1 sing N N 46 ALA CB HB2 sing N N 47 ALA CB HB3 sing N N 48 ALA OXT HXT sing N N 49 ARG N CA sing N N 50 ARG N H sing N N 51 ARG N H2 sing N N 52 ARG CA C sing N N 53 ARG CA CB sing N N 54 ARG CA HA sing N N 55 ARG C O doub N N 56 ARG C OXT sing N N 57 ARG CB CG sing N N 58 ARG CB HB2 sing N N 59 ARG CB HB3 sing N N 60 ARG CG CD sing N N 61 ARG CG HG2 sing N N 62 ARG CG HG3 sing N N 63 ARG CD NE sing N N 64 ARG CD HD2 sing N N 65 ARG CD HD3 sing N N 66 ARG NE CZ sing N N 67 ARG NE HE sing N N 68 ARG CZ NH1 sing N N 69 ARG CZ NH2 doub N N 70 ARG NH1 HH11 sing N N 71 ARG NH1 HH12 sing N N 72 ARG NH2 HH21 sing N N 73 ARG NH2 HH22 sing N N 74 ARG OXT HXT sing N N 75 ASN N CA sing N N 76 ASN N H sing N N 77 ASN N H2 sing N N 78 ASN CA C sing N N 79 ASN CA CB sing N N 80 ASN CA HA sing N N 81 ASN C O doub N N 82 ASN C OXT sing N N 83 ASN CB CG sing N N 84 ASN CB HB2 sing N N 85 ASN CB HB3 sing N N 86 ASN CG OD1 doub N N 87 ASN CG ND2 sing N N 88 ASN ND2 HD21 sing N N 89 ASN ND2 HD22 sing N N 90 ASN OXT HXT sing N N 91 ASP N CA sing N N 92 ASP N H sing N N 93 ASP N H2 sing N N 94 ASP CA C sing N N 95 ASP CA CB sing N N 96 ASP CA HA sing N N 97 ASP C O doub N N 98 ASP C OXT sing N N 99 ASP CB CG sing N N 100 ASP CB HB2 sing N N 101 ASP CB HB3 sing N N 102 ASP CG OD1 doub N N 103 ASP CG OD2 sing N N 104 ASP OD2 HD2 sing N N 105 ASP OXT HXT sing N N 106 CYS N CA sing N N 107 CYS N H sing N N 108 CYS N H2 sing N N 109 CYS CA C sing N N 110 CYS CA CB sing N N 111 CYS CA HA sing N N 112 CYS C O doub N N 113 CYS C OXT sing N N 114 CYS CB SG sing N N 115 CYS CB HB2 sing N N 116 CYS CB HB3 sing N N 117 CYS SG HG sing N N 118 CYS OXT HXT sing N N 119 GLN N CA sing N N 120 GLN N H sing N N 121 GLN N H2 sing N N 122 GLN CA C sing N N 123 GLN CA CB sing N N 124 GLN CA HA sing N N 125 GLN C O doub N N 126 GLN C OXT sing N N 127 GLN CB CG sing N N 128 GLN CB HB2 sing N N 129 GLN CB HB3 sing N N 130 GLN CG CD sing N N 131 GLN CG HG2 sing N N 132 GLN CG HG3 sing N N 133 GLN CD OE1 doub N N 134 GLN CD NE2 sing N N 135 GLN NE2 HE21 sing N N 136 GLN NE2 HE22 sing N N 137 GLN OXT HXT sing N N 138 GLU N CA sing N N 139 GLU N H sing N N 140 GLU N H2 sing N N 141 GLU CA C sing N N 142 GLU CA CB sing N N 143 GLU CA HA sing N N 144 GLU C O doub N N 145 GLU C OXT sing N N 146 GLU CB CG sing N N 147 GLU CB HB2 sing N N 148 GLU CB HB3 sing N N 149 GLU CG CD sing N N 150 GLU CG HG2 sing N N 151 GLU CG HG3 sing N N 152 GLU CD OE1 doub N N 153 GLU CD OE2 sing N N 154 GLU OE2 HE2 sing N N 155 GLU OXT HXT sing N N 156 GLY N CA sing N N 157 GLY N H sing N N 158 GLY N H2 sing N N 159 GLY CA C sing N N 160 GLY CA HA2 sing N N 161 GLY CA HA3 sing N N 162 GLY C O doub N N 163 GLY C OXT sing N N 164 GLY OXT HXT sing N N 165 HIS N CA sing N N 166 HIS N H sing N N 167 HIS N H2 sing N N 168 HIS CA C sing N N 169 HIS CA CB sing N N 170 HIS CA HA sing N N 171 HIS C O doub N N 172 HIS C OXT sing N N 173 HIS CB CG sing N N 174 HIS CB HB2 sing N N 175 HIS CB HB3 sing N N 176 HIS CG ND1 sing Y N 177 HIS CG CD2 doub Y N 178 HIS ND1 CE1 doub Y N 179 HIS ND1 HD1 sing N N 180 HIS CD2 NE2 sing Y N 181 HIS CD2 HD2 sing N N 182 HIS CE1 NE2 sing Y N 183 HIS CE1 HE1 sing N N 184 HIS NE2 HE2 sing N N 185 HIS OXT HXT sing N N 186 HOH O H1 sing N N 187 HOH O H2 sing N N 188 ILE N CA sing N N 189 ILE N H sing N N 190 ILE N H2 sing N N 191 ILE CA C sing N N 192 ILE CA CB sing N N 193 ILE CA HA sing N N 194 ILE C O doub N N 195 ILE C OXT sing N N 196 ILE CB CG1 sing N N 197 ILE CB CG2 sing N N 198 ILE CB HB sing N N 199 ILE CG1 CD1 sing N N 200 ILE CG1 HG12 sing N N 201 ILE CG1 HG13 sing N N 202 ILE CG2 HG21 sing N N 203 ILE CG2 HG22 sing N N 204 ILE CG2 HG23 sing N N 205 ILE CD1 HD11 sing N N 206 ILE CD1 HD12 sing N N 207 ILE CD1 HD13 sing N N 208 ILE OXT HXT sing N N 209 LEU N CA sing N N 210 LEU N H sing N N 211 LEU N H2 sing N N 212 LEU CA C sing N N 213 LEU CA CB sing N N 214 LEU CA HA sing N N 215 LEU C O doub N N 216 LEU C OXT sing N N 217 LEU CB CG sing N N 218 LEU CB HB2 sing N N 219 LEU CB HB3 sing N N 220 LEU CG CD1 sing N N 221 LEU CG CD2 sing N N 222 LEU CG HG sing N N 223 LEU CD1 HD11 sing N N 224 LEU CD1 HD12 sing N N 225 LEU CD1 HD13 sing N N 226 LEU CD2 HD21 sing N N 227 LEU CD2 HD22 sing N N 228 LEU CD2 HD23 sing N N 229 LEU OXT HXT sing N N 230 LYS N CA sing N N 231 LYS N H sing N N 232 LYS N H2 sing N N 233 LYS CA C sing N N 234 LYS CA CB sing N N 235 LYS CA HA sing N N 236 LYS C O doub N N 237 LYS C OXT sing N N 238 LYS CB CG sing N N 239 LYS CB HB2 sing N N 240 LYS CB HB3 sing N N 241 LYS CG CD sing N N 242 LYS CG HG2 sing N N 243 LYS CG HG3 sing N N 244 LYS CD CE sing N N 245 LYS CD HD2 sing N N 246 LYS CD HD3 sing N N 247 LYS CE NZ sing N N 248 LYS CE HE2 sing N N 249 LYS CE HE3 sing N N 250 LYS NZ HZ1 sing N N 251 LYS NZ HZ2 sing N N 252 LYS NZ HZ3 sing N N 253 LYS OXT HXT sing N N 254 MET N CA sing N N 255 MET N H sing N N 256 MET N H2 sing N N 257 MET CA C sing N N 258 MET CA CB sing N N 259 MET CA HA sing N N 260 MET C O doub N N 261 MET C OXT sing N N 262 MET CB CG sing N N 263 MET CB HB2 sing N N 264 MET CB HB3 sing N N 265 MET CG SD sing N N 266 MET CG HG2 sing N N 267 MET CG HG3 sing N N 268 MET SD CE sing N N 269 MET CE HE1 sing N N 270 MET CE HE2 sing N N 271 MET CE HE3 sing N N 272 MET OXT HXT sing N N 273 PHE N CA sing N N 274 PHE N H sing N N 275 PHE N H2 sing N N 276 PHE CA C sing N N 277 PHE CA CB sing N N 278 PHE CA HA sing N N 279 PHE C O doub N N 280 PHE C OXT sing N N 281 PHE CB CG sing N N 282 PHE CB HB2 sing N N 283 PHE CB HB3 sing N N 284 PHE CG CD1 doub Y N 285 PHE CG CD2 sing Y N 286 PHE CD1 CE1 sing Y N 287 PHE CD1 HD1 sing N N 288 PHE CD2 CE2 doub Y N 289 PHE CD2 HD2 sing N N 290 PHE CE1 CZ doub Y N 291 PHE CE1 HE1 sing N N 292 PHE CE2 CZ sing Y N 293 PHE CE2 HE2 sing N N 294 PHE CZ HZ sing N N 295 PHE OXT HXT sing N N 296 PRO N CA sing N N 297 PRO N CD sing N N 298 PRO N H sing N N 299 PRO CA C sing N N 300 PRO CA CB sing N N 301 PRO CA HA sing N N 302 PRO C O doub N N 303 PRO C OXT sing N N 304 PRO CB CG sing N N 305 PRO CB HB2 sing N N 306 PRO CB HB3 sing N N 307 PRO CG CD sing N N 308 PRO CG HG2 sing N N 309 PRO CG HG3 sing N N 310 PRO CD HD2 sing N N 311 PRO CD HD3 sing N N 312 PRO OXT HXT sing N N 313 SER N CA sing N N 314 SER N H sing N N 315 SER N H2 sing N N 316 SER CA C sing N N 317 SER CA CB sing N N 318 SER CA HA sing N N 319 SER C O doub N N 320 SER C OXT sing N N 321 SER CB OG sing N N 322 SER CB HB2 sing N N 323 SER CB HB3 sing N N 324 SER OG HG sing N N 325 SER OXT HXT sing N N 326 THR N CA sing N N 327 THR N H sing N N 328 THR N H2 sing N N 329 THR CA C sing N N 330 THR CA CB sing N N 331 THR CA HA sing N N 332 THR C O doub N N 333 THR C OXT sing N N 334 THR CB OG1 sing N N 335 THR CB CG2 sing N N 336 THR CB HB sing N N 337 THR OG1 HG1 sing N N 338 THR CG2 HG21 sing N N 339 THR CG2 HG22 sing N N 340 THR CG2 HG23 sing N N 341 THR OXT HXT sing N N 342 TRP N CA sing N N 343 TRP N H sing N N 344 TRP N H2 sing N N 345 TRP CA C sing N N 346 TRP CA CB sing N N 347 TRP CA HA sing N N 348 TRP C O doub N N 349 TRP C OXT sing N N 350 TRP CB CG sing N N 351 TRP CB HB2 sing N N 352 TRP CB HB3 sing N N 353 TRP CG CD1 doub Y N 354 TRP CG CD2 sing Y N 355 TRP CD1 NE1 sing Y N 356 TRP CD1 HD1 sing N N 357 TRP CD2 CE2 doub Y N 358 TRP CD2 CE3 sing Y N 359 TRP NE1 CE2 sing Y N 360 TRP NE1 HE1 sing N N 361 TRP CE2 CZ2 sing Y N 362 TRP CE3 CZ3 doub Y N 363 TRP CE3 HE3 sing N N 364 TRP CZ2 CH2 doub Y N 365 TRP CZ2 HZ2 sing N N 366 TRP CZ3 CH2 sing Y N 367 TRP CZ3 HZ3 sing N N 368 TRP CH2 HH2 sing N N 369 TRP OXT HXT sing N N 370 TYR N CA sing N N 371 TYR N H sing N N 372 TYR N H2 sing N N 373 TYR CA C sing N N 374 TYR CA CB sing N N 375 TYR CA HA sing N N 376 TYR C O doub N N 377 TYR C OXT sing N N 378 TYR CB CG sing N N 379 TYR CB HB2 sing N N 380 TYR CB HB3 sing N N 381 TYR CG CD1 doub Y N 382 TYR CG CD2 sing Y N 383 TYR CD1 CE1 sing Y N 384 TYR CD1 HD1 sing N N 385 TYR CD2 CE2 doub Y N 386 TYR CD2 HD2 sing N N 387 TYR CE1 CZ doub Y N 388 TYR CE1 HE1 sing N N 389 TYR CE2 CZ sing Y N 390 TYR CE2 HE2 sing N N 391 TYR CZ OH sing N N 392 TYR OH HH sing N N 393 TYR OXT HXT sing N N 394 VAL N CA sing N N 395 VAL N H sing N N 396 VAL N H2 sing N N 397 VAL CA C sing N N 398 VAL CA CB sing N N 399 VAL CA HA sing N N 400 VAL C O doub N N 401 VAL C OXT sing N N 402 VAL CB CG1 sing N N 403 VAL CB CG2 sing N N 404 VAL CB HB sing N N 405 VAL CG1 HG11 sing N N 406 VAL CG1 HG12 sing N N 407 VAL CG1 HG13 sing N N 408 VAL CG2 HG21 sing N N 409 VAL CG2 HG22 sing N N 410 VAL CG2 HG23 sing N N 411 VAL OXT HXT sing N N 412 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PENTAETHYLENE GLYCOL' 1PE 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3O5P _pdbx_initial_refinement_model.details 'PDB entry 3O5P' #