HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 28-JUL-10 3O60 TITLE THE CRYSTAL STRUCTURE OF LIN0861 FROM LISTERIA INNOCUA TO 2.8A COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIN0861 PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA INNOCUA; SOURCE 3 ORGANISM_TAXID: 1642; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PMCSG19B KEYWDS PSI, MCSG, STRUCTURAL GENOMICS, MIDWEST CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS, PROTEIN STRUCTURE INITIATIVE, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR A.J.STEIN,E.RAKOWSKI,B.FELDMANN,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 2 08-NOV-17 3O60 1 REMARK REVDAT 1 29-SEP-10 3O60 0 JRNL AUTH A.J.STEIN,E.RAKOWSKI,B.FELDMANN,A.JOACHIMIAK JRNL TITL THE CRYSTAL STRUCTURE OF LIN0861 FROM LISTERIA INNOCUA TO JRNL TITL 2 2.8A JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.5_2 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.69 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 3 NUMBER OF REFLECTIONS : 21502 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.350 REMARK 3 FREE R VALUE TEST SET COUNT : 1092 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 25.6170 - 5.3432 0.92 2855 147 0.1882 0.2210 REMARK 3 2 5.3432 - 4.2474 0.94 2900 153 0.1806 0.2148 REMARK 3 3 4.2474 - 3.7123 0.94 2882 157 0.2137 0.2452 REMARK 3 4 3.7123 - 3.3737 0.92 2800 161 0.2312 0.2503 REMARK 3 5 3.3737 - 3.1323 0.91 2777 147 0.2517 0.2573 REMARK 3 6 3.1323 - 2.9480 0.86 2653 154 0.2901 0.3049 REMARK 3 7 2.9480 - 2.8005 0.81 2464 141 0.3281 0.3286 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 40.21 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.030 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 10.12500 REMARK 3 B22 (A**2) : 10.12500 REMARK 3 B33 (A**2) : -20.25000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.4990 REMARK 3 OPERATOR: H,-K,-L REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2973 REMARK 3 ANGLE : 1.219 4042 REMARK 3 CHIRALITY : 0.072 484 REMARK 3 PLANARITY : 0.005 512 REMARK 3 DIHEDRAL : 21.203 1050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3O60 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-JUL-10. REMARK 100 THE DEPOSITION ID IS D_1000060708. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JUN-10 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 531 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 2.5 REMARK 200 DATA REDUNDANCY : 1.100 REMARK 200 R MERGE (I) : 0.12700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 50.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 2.5 REMARK 200 DATA REDUNDANCY IN SHELL : 1.10 REMARK 200 R MERGE FOR SHELL (I) : 0.12700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000, SHELX, MLPHARE, DM, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.26M AMMONIUM SULFATE, 0.1M MES PH REMARK 280 6.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 297K, PH 6.00 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.42000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 24.21000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 72.63000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -57.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 ASN A 2 REMARK 465 LYS A 185 REMARK 465 MSE B 1 REMARK 465 ASN B 2 REMARK 465 LYS B 185 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 6 CG CD CE NZ REMARK 470 LEU A 11 CG CD1 CD2 REMARK 470 ASN A 12 CG OD1 ND2 REMARK 470 ARG A 16 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 19 CG CD CE NZ REMARK 470 GLU A 39 CG CD OE1 OE2 REMARK 470 GLU A 48 CG CD OE1 OE2 REMARK 470 ARG A 51 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 59 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 62 CG CD CE NZ REMARK 470 LYS A 90 CG CD CE NZ REMARK 470 ARG A 95 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 136 CG CD OE1 OE2 REMARK 470 LYS A 165 CG CD CE NZ REMARK 470 GLU A 174 CG CD OE1 OE2 REMARK 470 GLU A 178 CG CD OE1 OE2 REMARK 470 ARG A 181 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 6 CG CD CE NZ REMARK 470 GLN B 9 CG CD OE1 NE2 REMARK 470 LEU B 11 CG CD1 CD2 REMARK 470 ASN B 12 CG OD1 ND2 REMARK 470 LYS B 19 CG CD CE NZ REMARK 470 GLU B 39 CG CD OE1 OE2 REMARK 470 GLU B 48 CG CD OE1 OE2 REMARK 470 ARG B 59 CG CD NE CZ NH1 NH2 REMARK 470 HIS B 60 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 62 CG CD CE NZ REMARK 470 LEU B 81 CG CD1 CD2 REMARK 470 LYS B 90 CG CD CE NZ REMARK 470 LYS B 103 CG CD CE NZ REMARK 470 LYS B 143 CG CD CE NZ REMARK 470 MSE B 152 CG SE CE REMARK 470 LYS B 165 CG CD CE NZ REMARK 470 GLN B 171 CG CD OE1 NE2 REMARK 470 GLU B 174 CG CD OE1 OE2 REMARK 470 ARG B 181 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER B 53 OG1 THR B 56 1.59 REMARK 500 OE1 GLN A 9 NH2 ARG A 130 2.04 REMARK 500 OH TYR A 32 NE2 GLN A 109 2.04 REMARK 500 OH TYR A 78 OE1 GLN B 85 2.05 REMARK 500 OD2 ASP B 14 OG1 THR B 17 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLN A 177 O LEU B 183 2654 1.81 REMARK 500 OD2 ASP A 141 OH TYR B 167 2654 1.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 10 C - N - CD ANGL. DEV. = -17.6 DEGREES REMARK 500 SER A 140 N - CA - CB ANGL. DEV. = -28.9 DEGREES REMARK 500 PRO A 146 C - N - CD ANGL. DEV. = -15.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 115 34.18 81.86 REMARK 500 GLU A 136 0.83 83.55 REMARK 500 PRO B 10 143.07 -34.58 REMARK 500 SER B 142 -52.66 -12.93 REMARK 500 LYS B 143 29.77 -146.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 130 0.11 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 186 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 186 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 187 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 187 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC39014.0 RELATED DB: TARGETDB DBREF 3O60 A 1 185 UNP Q92DF2 Q92DF2_LISIN 1 185 DBREF 3O60 B 1 185 UNP Q92DF2 Q92DF2_LISIN 1 185 SEQRES 1 A 185 MSE ASN ASN TYR VAL LYS VAL HIS GLN PRO LEU ASN VAL SEQRES 2 A 185 ASP LEU ARG THR GLN LYS THR GLN THR LYS LEU TYR THR SEQRES 3 A 185 VAL LEU GLU ARG PHE TYR VAL GLU ASP ARG THR PHE GLU SEQRES 4 A 185 SER ILE SER ILE LYS ASP LEU CYS GLU GLN ALA ARG VAL SEQRES 5 A 185 SER ARG ALA THR PHE TYR ARG HIS HIS LYS GLU ILE ILE SEQRES 6 A 185 GLN VAL ILE GLU VAL GLN ILE LEU ARG THR MSE GLN TYR SEQRES 7 A 185 PHE SER LEU GLU PHE ASP GLN ILE ILE LEU THR LYS GLU SEQRES 8 A 185 ASN ILE GLN ARG LEU ILE LEU ARG THR ILE GLN LYS ASN SEQRES 9 A 185 PRO LEU LEU PHE GLN VAL ILE PHE TRP SER ARG ALA GLU SEQRES 10 A 185 ASN ILE PHE ILE ASP VAL VAL SER GLY GLU ILE LEU ARG SEQRES 11 A 185 ILE SER LEU LEU LYS GLU VAL SER PHE SER ASP SER LYS SEQRES 12 A 185 PHE MSE PRO ASN CYS PHE ALA ARG MSE ILE LEU SER LEU SEQRES 13 A 185 ALA ALA GLU ILE GLN GLN SER ASN LYS ASP TYR THR ASN SEQRES 14 A 185 ASP GLN LEU VAL GLU LEU ILE GLN GLU ALA ALA ARG PHE SEQRES 15 A 185 LEU GLN LYS SEQRES 1 B 185 MSE ASN ASN TYR VAL LYS VAL HIS GLN PRO LEU ASN VAL SEQRES 2 B 185 ASP LEU ARG THR GLN LYS THR GLN THR LYS LEU TYR THR SEQRES 3 B 185 VAL LEU GLU ARG PHE TYR VAL GLU ASP ARG THR PHE GLU SEQRES 4 B 185 SER ILE SER ILE LYS ASP LEU CYS GLU GLN ALA ARG VAL SEQRES 5 B 185 SER ARG ALA THR PHE TYR ARG HIS HIS LYS GLU ILE ILE SEQRES 6 B 185 GLN VAL ILE GLU VAL GLN ILE LEU ARG THR MSE GLN TYR SEQRES 7 B 185 PHE SER LEU GLU PHE ASP GLN ILE ILE LEU THR LYS GLU SEQRES 8 B 185 ASN ILE GLN ARG LEU ILE LEU ARG THR ILE GLN LYS ASN SEQRES 9 B 185 PRO LEU LEU PHE GLN VAL ILE PHE TRP SER ARG ALA GLU SEQRES 10 B 185 ASN ILE PHE ILE ASP VAL VAL SER GLY GLU ILE LEU ARG SEQRES 11 B 185 ILE SER LEU LEU LYS GLU VAL SER PHE SER ASP SER LYS SEQRES 12 B 185 PHE MSE PRO ASN CYS PHE ALA ARG MSE ILE LEU SER LEU SEQRES 13 B 185 ALA ALA GLU ILE GLN GLN SER ASN LYS ASP TYR THR ASN SEQRES 14 B 185 ASP GLN LEU VAL GLU LEU ILE GLN GLU ALA ALA ARG PHE SEQRES 15 B 185 LEU GLN LYS MODRES 3O60 MSE A 76 MET SELENOMETHIONINE MODRES 3O60 MSE A 145 MET SELENOMETHIONINE MODRES 3O60 MSE A 152 MET SELENOMETHIONINE MODRES 3O60 MSE B 76 MET SELENOMETHIONINE MODRES 3O60 MSE B 145 MET SELENOMETHIONINE MODRES 3O60 MSE B 152 MET SELENOMETHIONINE HET MSE A 76 8 HET MSE A 145 8 HET MSE A 152 8 HET MSE B 76 8 HET MSE B 145 8 HET MSE B 152 5 HET SO4 A 186 5 HET SO4 A 187 5 HET SO4 B 186 5 HET SO4 B 187 5 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 SO4 4(O4 S 2-) HELIX 1 1 ASP A 14 GLU A 34 1 21 HELIX 2 2 SER A 42 ARG A 51 1 10 HELIX 3 3 SER A 53 HIS A 61 1 9 HELIX 4 4 ILE A 64 GLN A 85 1 22 HELIX 5 5 THR A 89 ASN A 104 1 16 HELIX 6 6 ASN A 104 ARG A 115 1 12 HELIX 7 7 ALA A 116 LYS A 135 1 20 HELIX 8 8 LYS A 143 SER A 163 1 21 HELIX 9 9 THR A 168 LEU A 183 1 16 HELIX 10 10 ASP B 14 GLU B 34 1 21 HELIX 11 11 THR B 37 ILE B 41 5 5 HELIX 12 12 SER B 42 ALA B 50 1 9 HELIX 13 13 SER B 53 HIS B 61 1 9 HELIX 14 14 ILE B 64 ILE B 86 1 23 HELIX 15 15 THR B 89 ASN B 104 1 16 HELIX 16 16 PRO B 105 SER B 114 1 10 HELIX 17 17 ALA B 116 LYS B 135 1 20 HELIX 18 18 PHE B 144 SER B 163 1 20 HELIX 19 19 THR B 168 GLN B 184 1 17 LINK C THR A 75 N MSE A 76 1555 1555 1.33 LINK C MSE A 76 N GLN A 77 1555 1555 1.32 LINK C PHE A 144 N MSE A 145 1555 1555 1.30 LINK C MSE A 145 N PRO A 146 1555 1555 1.31 LINK C ARG A 151 N MSE A 152 1555 1555 1.29 LINK C MSE A 152 N ILE A 153 1555 1555 1.33 LINK C THR B 75 N MSE B 76 1555 1555 1.32 LINK C MSE B 76 N GLN B 77 1555 1555 1.33 LINK C PHE B 144 N MSE B 145 1555 1555 1.31 LINK C MSE B 145 N PRO B 146 1555 1555 1.31 LINK C ARG B 151 N MSE B 152 1555 1555 1.30 LINK C MSE B 152 N ILE B 153 1555 1555 1.31 SITE 1 AC1 3 ARG B 95 ARG B 99 ASN B 169 SITE 1 AC2 3 ARG A 95 ARG A 99 ASN A 169 SITE 1 AC3 3 VAL B 52 SER B 53 ARG B 54 SITE 1 AC4 3 VAL A 52 SER A 53 THR A 56 CRYST1 95.457 95.457 96.840 90.00 90.00 90.00 P 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010476 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010476 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010326 0.00000